F372795

General Info

Members Datasets Scaffolds Average Seq Length
264 191 528 124

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_1087590|Ga0451576_1087590_106_546
Length 146
Sequence LFFIAFGPARLHFACSQRETIMPKEIISTASAPIPFAGYSQAVKSGGFIFVAGQGPFDASGAIAGPSIQEQTKQCLRNIEAILHAGGSSMEKVVSATFILAEESDFAGMNEEWNRWFPKDPPARQGAKLPVRPKGMKISIAVIAEQ

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
115 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
126 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
127 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
128 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
129 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
134 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
135 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
136 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
137 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
142 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
143 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
144 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
145 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
146 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
150 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
151 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
152 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
155 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
156 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
157 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
158 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
159 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
160 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
161 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
184 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
185 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
189 2643221629 Devosia sp. Root105 Isolate Unclassified
190 2643221662 Devosia sp. Root413D1 Isolate Unclassified
191 8005395548 Rhizobium sp. R339 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.86
Metatranscriptomes 0
Isolates 1.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.52
Nodule 0.38
Rhizoplane 0.76
Rhizosphere 92.8
Stem 0
Stem Tuber 0
Unclassified 30.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_1087590 3300045051 Unclassified 837
2 JGI25404J52841_10067225 3300003659 Bacteria 750
3 Ga0065707_10093683 3300005295 Bacteria 3593
4 Ga0065707_10234382 3300005295 Bacteria 1177
5 Ga0070683_100334975 3300005329 Bacteria 1441
6 Ga0070690_100030716 3300005330 Unclassified 3342
7 Ga0070690_100217268 3300005330 Unclassified 1338
8 Ga0070670_100024759 3300005331 Bacteria 5162
9 Ga0068868_101088224 3300005338 Unclassified 735
10 Ga0070689_100288582 3300005340 Bacteria 1363
11 Ga0070687_100440086 3300005343 Bacteria 864
12 Ga0070661_100476488 3300005344 Bacteria 996
13 Ga0070668_100605259 3300005347 Bacteria 959
14 Ga0070669_100471805 3300005353 Bacteria 1037
15 Ga0070671_100061409 3300005355 Bacteria 3130
16 Ga0070673_100444563 3300005364 Bacteria 1165
17 Ga0070688_100032494 3300005365 Bacteria 3147
18 Ga0070659_100518194 3300005366 Bacteria 1018
19 Ga0070667_101468330 3300005367 Bacteria 640
20 Ga0070713_100193254 3300005436 Bacteria 1835
21 Ga0070701_10743464 3300005438 Bacteria 664
22 Ga0070700_100004801 3300005441 Bacteria 7092
23 Ga0070694_100113191 3300005444 Bacteria 1936
24 Ga0070708_101168593 3300005445 Bacteria 720
25 Ga0070662_100328868 3300005457 Bacteria 1248
26 Ga0068867_100059279 3300005459 Bacteria 2838
27 Ga0070685_10209917 3300005466 Bacteria 1270
28 Ga0070698_100456173 3300005471 Bacteria 1214
29 Ga0070672_101158663 3300005543 Unclassified 688
30 Ga0070672_101759715 3300005543 Unclassified 557
31 Ga0070695_100495011 3300005545 Bacteria 944
32 Ga0070696_100393762 3300005546 Bacteria 1082
33 Ga0070665_100349092 3300005548 Bacteria 1485
34 Ga0070665_102404622 3300005548 Unclassified 529
35 Ga0068855_100781438 3300005563 Unclassified 1016
36 Ga0070664_100269355 3300005564 Bacteria 1534
37 Ga0068856_100018805 3300005614 Bacteria 6700
38 Ga0070702_101523963 3300005615 Bacteria 551
39 Ga0068852_100543328 3300005616 Unclassified 1161
40 Ga0068864_100337779 3300005618 Bacteria 1419
41 Ga0068864_100757056 3300005618 Unclassified 952
42 Ga0068861_100859847 3300005719 Bacteria 856
43 Ga0068861_100976925 3300005719 Bacteria 807
44 Ga0068861_101132908 3300005719 Unclassified 753
45 Ga0068851_10502239 3300005834 Unclassified 727
46 Ga0068870_10404780 3300005840 Bacteria 889
47 Ga0068863_100003696 3300005841 Bacteria 15124
48 Ga0068863_101782736 3300005841 Bacteria 625
49 Ga0068858_100009194 3300005842 Bacteria 9443
50 Ga0068858_100993935 3300005842 Bacteria 822
51 Ga0068860_100226373 3300005843 Bacteria 1817
52 Ga0068862_100857085 3300005844 Bacteria 891
53 Ga0081455_10023080 3300005937 Bacteria 5796
54 Ga0081455_10176639 3300005937 Bacteria 1621
55 Ga0081540_1002691 3300005983 Bacteria 14453
56 Ga0070717_10110557 3300006028 Bacteria 2344
57 Ga0070712_100346828 3300006175 Unclassified 1214
58 Ga0075367_10159760 3300006178 Bacteria 1401
59 Ga0075428_100011874 3300006844 Bacteria 9686
60 Ga0075428_100178939 3300006844 Unclassified 2296
61 Ga0075428_100436088 3300006844 Bacteria 1403
62 Ga0075428_102334603 3300006844 Unclassified 550
63 Ga0075428_102436034 3300006844 Unclassified 537
64 Ga0075431_100217691 3300006847 Bacteria 1949
65 Ga0075433_10719410 3300006852 Bacteria 874
66 Ga0075433_11054128 3300006852 Unclassified 707
67 Ga0075434_101406772 3300006871 Unclassified 707
68 Ga0075429_100057371 3300006880 Unclassified 3390
69 Ga0075429_100094926 3300006880 Bacteria 2601
70 Ga0075429_101380309 3300006880 Bacteria 614
71 Ga0075429_101819648 3300006880 Unclassified 528
72 Ga0075436_100562933 3300006914 Unclassified 837
73 Ga0075435_100137004 3300007076 Bacteria 2051
74 Ga0075435_101187722 3300007076 Unclassified 667
75 Ga0105240_10010385 3300009093 Bacteria 13089
76 Ga0105240_10366600 3300009093 Unclassified 1630
77 Ga0111539_10134181 3300009094 Unclassified 2899
78 Ga0111539_10302785 3300009094 Bacteria 1860
79 Ga0111539_10701049 3300009094 Bacteria 1178
80 Ga0111539_10726709 3300009094 Bacteria 1156
81 Ga0111539_10944365 3300009094 Bacteria 1003
82 Ga0111539_11477487 3300009094 Unclassified 788
83 Ga0111539_11787913 3300009094 Unclassified 713
84 Ga0111539_11960619 3300009094 Bacteria 679
85 Ga0105245_10077143 3300009098 Unclassified 3037
86 Ga0105245_10243282 3300009098 Bacteria 1745
87 Ga0105245_10263800 3300009098 Bacteria 1677
88 Ga0105247_10593989 3300009101 Bacteria 820
89 Ga0114129_10007081 3300009147 Bacteria 15959
90 Ga0114129_10120365 3300009147 Unclassified 3615
91 Ga0114129_10746133 3300009147 Bacteria 1254
92 Ga0114129_11680122 3300009147 Bacteria 775
93 Ga0105243_10152846 3300009148 Bacteria 1982
94 Ga0105241_10027498 3300009174 Bacteria 4236
95 Ga0105242_10001868 3300009176 Bacteria 16544
96 Ga0105242_10329468 3300009176 Unclassified 1403
97 Ga0105242_10546149 3300009176 Bacteria 1110
98 Ga0105248_10003270 3300009177 Bacteria 17980
99 Ga0105248_11373507 3300009177 Bacteria 799
100 Ga0105238_10006006 3300009551 Bacteria 12035
101 Ga0105249_10270187 3300009553 Bacteria 1694
102 Ga0105239_10028915 3300010375 Bacteria 6092
103 Ga0105239_10189629 3300010375 Bacteria 2301
104 Ga0105239_10519771 3300010375 Bacteria 1354
105 Ga0105246_10015519 3300011119 Bacteria 4814
106 Ga0105246_10203036 3300011119 Unclassified 1542
107 Ga0105246_11090847 3300011119 Bacteria 728
108 Ga0157371_10005664 3300013102 Bacteria 10487
109 Ga0157370_10111169 3300013104 Unclassified 2561
110 Ga0157369_10027406 3300013105 Bacteria 6316
111 Ga0157369_10266381 3300013105 Unclassified 1786
112 Ga0157374_10007355 3300013296 Bacteria 9389
113 Ga0157374_11585667 3300013296 Bacteria 679
114 Ga0163162_10062624 3300013306 Bacteria 3760
115 Ga0163162_10592911 3300013306 Bacteria 1235
116 Ga0163162_11168974 3300013306 Unclassified 873
117 Ga0157372_10006175 3300013307 Bacteria 12737
118 Ga0157372_10017130 3300013307 Bacteria 7778
119 Ga0157375_10371380 3300013308 Bacteria 1597
120 Ga0157375_10446351 3300013308 Bacteria 1459
121 Ga0163163_10095599 3300014325 Bacteria 2991
122 Ga0157380_10005677 3300014326 Bacteria 8727
123 Ga0157380_10008421 3300014326 Bacteria 7362
124 Ga0157380_10042543 3300014326 Bacteria 3551
125 Ga0157380_10265209 3300014326 Bacteria 1562
126 Ga0157380_10680823 3300014326 Bacteria 1030
127 Ga0157377_10000821 3300014745 Bacteria 12887
128 Ga0157377_10053394 3300014745 Bacteria 2285
129 Ga0157379_10062106 3300014968 Bacteria 3341
130 Ga0157376_10009362 3300014969 Bacteria 7115
131 Ga0213876_10144479 3300021384 Unclassified 1265
132 Ga0207643_10075972 3300025908 Bacteria 1940
133 Ga0207643_10512167 3300025908 Bacteria 768
134 Ga0207693_10844140 3300025915 Unclassified 705
135 Ga0207657_10592887 3300025919 Unclassified 865
136 Ga0207649_10535600 3300025920 Bacteria 894
137 Ga0207650_11027553 3300025925 Bacteria 701
138 Ga0207687_10208672 3300025927 Bacteria 1531
139 Ga0207700_10009948 3300025928 Bacteria 5972
140 Ga0207700_10181956 3300025928 Bacteria 1761
141 Ga0207644_10218518 3300025931 Bacteria 1510
142 Ga0207690_10893586 3300025932 Unclassified 737
143 Ga0207706_10071630 3300025933 Unclassified 3049
144 Ga0207686_10303980 3300025934 Bacteria 1186
145 Ga0207686_10619785 3300025934 Bacteria 853
146 Ga0207670_10298693 3300025936 Bacteria 1260
147 Ga0207670_10659292 3300025936 Unclassified 863
148 Ga0207669_10011091 3300025937 Bacteria 4372
149 Ga0207704_10708490 3300025938 Unclassified 834
150 Ga0207691_11335122 3300025940 Unclassified 591
151 Ga0207711_10002984 3300025941 Bacteria 14787
152 Ga0207667_10592895 3300025949 Unclassified 1118
153 Ga0207651_10549563 3300025960 Unclassified 1004
154 Ga0207668_10322896 3300025972 Unclassified 1282
155 Ga0207703_10106972 3300026035 Bacteria 2380
156 Ga0207678_11601796 3300026067 Unclassified 573
157 Ga0207708_10005291 3300026075 Bacteria 9503
158 Ga0207648_10077172 3300026089 Bacteria 2904
159 Ga0207676_11233988 3300026095 Bacteria 741
160 Ga0207675_100762140 3300026118 Unclassified 979
161 Ga0207675_100962250 3300026118 Bacteria 871
162 Ga0207683_10122653 3300026121 Bacteria 2334
163 Ga0207698_10166464 3300026142 Unclassified 1935
164 Ga0207428_10006497 3300027907 Bacteria 10790
165 Ga0207428_10063632 3300027907 Unclassified 2914
166 Ga0268266_10439523 3300028379 Bacteria 1239
167 Ga0268265_10416144 3300028380 Unclassified 1247
168 Ga0307517_10074078 3300028786 Bacteria 3008
169 Ga0307515_10737713 3300028794 Unclassified 603
170 Ga0265338_10548675 3300028800 Bacteria 809
171 Ga0265320_10336427 3300031240 Bacteria 667
172 Ga0307513_10128622 3300031456 Bacteria 2483
173 Ga0307508_10213674 3300031616 Bacteria 1529
174 Ga0307410_10066063 3300031852 Bacteria 2490
175 Ga0307407_10823702 3300031903 Bacteria 707
176 Ga0307412_10046308 3300031911 Bacteria 2849
177 Ga0307409_100216263 3300031995 Bacteria 1726
178 Ga0307416_100686289 3300032002 Bacteria 1112
179 Ga0307411_10022470 3300032005 Bacteria 3714
180 Ga0307411_10535196 3300032005 Bacteria 997
181 Ga0307411_10880386 3300032005 Bacteria 794
182 Ga0307415_101520543 3300032126 Unclassified 641
183 Ga0373934_0313227 3300035086 Unclassified 651
184 Ga0373952_0127276 3300035092 Bacteria 696
185 Ga0373957_0159836 3300035120 Unclassified 928
186 Ga0373927_0000001 3300035695 Bacteria 1082160
187 Ga0373933_0006321 3300035724 Bacteria 6449
188 Ga0373937_0030417 3300036401 Bacteria 4891
189 Ga0373937_1604674 3300036401 Unclassified 598
190 Ga0395900_0460214 3300037418 Bacteria 1227
191 Ga0436365_1626007 3300039437 Bacteria 4497
192 Ga0451835_0070002 3300041492 Bacteria 603
193 Ga0451835_0187096 3300041492 Bacteria 635
194 Ga0451853_0477880 3300041512 Bacteria 4515
195 Ga0451853_3842077 3300041512 Unclassified 697
196 Ga0439450_069922 3300042008 Unclassified 860
197 Ga0439455_0157634 3300042012 Unclassified 648
198 Ga0439459_0202698 3300042438 Unclassified 542
199 Ga0451577_0080228 3300042876 Bacteria 2909
200 Ga0453683_0441245 3300044673 Unclassified 841
201 Ga0453683_0529261 3300044673 Bacteria 766
202 Ga0453684_0352304 3300044712 Bacteria 1659
203 Ga0466967_0311725 3300045976 Bacteria 1516
204 Ga0495603_0049979 3300046455 Bacteria 2488
205 Ga0495651_0006446 3300046462 Bacteria 8978
206 Ga0495582_0483469 3300046473 Unclassified 715
207 Ga0495584_0380416 3300046491 Unclassified 717
208 Ga0495594_0358852 3300046499 Unclassified 830
209 Ga0495628_0022970 3300046516 Bacteria 5120
210 Ga0495630_0102900 3300046517 Bacteria 2161
211 Ga0495631_0120055 3300046518 Unclassified 1131
212 Ga0495663_0323583 3300046525 Unclassified 558
213 Ga0495652_0018170 3300046529 Bacteria 6275
214 Ga0495597_0365843 3300046542 Unclassified 552
215 Ga0495645_0003822 3300046543 Bacteria 10242
216 Ga0495667_0051433 3300046559 Unclassified 2718
217 Ga0495656_0320197 3300046615 Unclassified 799
218 Ga0495661_0503446 3300046665 Unclassified 577
219 Ga0495588_0093478 3300046674 Bacteria 1576
220 Ga0495588_0671918 3300046674 Unclassified 542
221 Ga0495623_0002196 3300046679 Bacteria 13008
222 Ga0495670_0370552 3300046691 Unclassified 772
223 Ga0495600_0006903 3300046809 Bacteria 6924
224 Ga0495581_0418691 3300047315 Unclassified 781
225 Ga0495581_0725312 3300047315 Unclassified 573
226 Ga0495675_0125570 3300047444 Unclassified 1596
227 Ga0495684_0199388 3300047471 Bacteria 1476
228 Ga0496107_0256948 3300048910 Unclassified 1300
229 Ga0496110_0824741 3300048913 Bacteria 832
230 Ga0501298_155511 3300049521 Unclassified 562
231 Ga0501034_0063326 3300049571 Bacteria 3712
232 Ga0501039_1499954 3300049575 Bacteria 518
233 Ga0501046_0120135 3300049580 Bacteria 2000
234 Ga0501047_0059125 3300049581 Bacteria 3701
235 Ga0501074_0100734 3300049590 Bacteria 2068
236 Ga0501080_0766583 3300049742 Bacteria 848
237 nmdc:mga05p37_351044_c1 3300050507 Bacteria 1737
238 nmdc:mga09592_105360_c1 3300050508 Bacteria 2418
239 nmdc:mga09592_390332_c1 3300050508 Bacteria 1203
240 nmdc:mga06r32_289696_c1 3300050510 Unclassified 1624
241 nmdc:mga08y16_1207829_c1 3300050511 Unclassified 727
242 nmdc:mga08y16_158883_c1 3300050511 Unclassified 2349
243 nmdc:mga08y16_322240_c1 3300050511 Bacteria 1591
244 nmdc:mga08y16_475486_c1 3300050511 Bacteria 1272
245 nmdc:mga08y16_808546_c1 3300050511 Bacteria 930
246 nmdc:mga0n895_663652_c1 3300050512 Bacteria 1041
247 nmdc:mga0rr50_255813_c1 3300050513 Bacteria 1456
248 nmdc:mga08x19_232613_c1 3300050514 Unclassified 1269
249 nmdc:mga08x19_265697_c1 3300050514 Bacteria 1187
250 nmdc:mga0a205_124485_c1 3300050515 Bacteria 2478
251 nmdc:mga0a205_1528164_c1 3300050515 Bacteria 516
252 nmdc:mga0sz30_233906_c1 3300050516 Bacteria 818
253 Ga0495619_0068812 3300053085 Bacteria 2366
254 Ga0500595_150008 3300053119 Bacteria 652
255 Ga0500588_0010403 3300053146 Bacteria 2244
256 Ga0590071_000061 3300059421 Bacteria 29023
257 Ga0590071_131442 3300059421 Unclassified 643
258 Ga0590074_000200 3300059423 Bacteria 7669
259 Ga0590075_000074 3300059424 Bacteria 25445
260 Ga0590075_117396 3300059424 Unclassified 696
261 Ga0590077_050556 3300059426 Bacteria 932
262 2644169035 2643221629 Bacteria 5850260
263 2644347586 2643221662 Bacteria 5851492
264 8005401645 8005395548 Bacteria 6806915
265 Ga0451576_1087590
266 JGI25404J52841_10067225
267 Ga0065707_10093683
268 Ga0065707_10234382
269 Ga0070683_100334975
270 Ga0070690_100030716
271 Ga0070690_100217268
272 Ga0070670_100024759
273 Ga0068868_101088224
274 Ga0070689_100288582
275 Ga0070687_100440086
276 Ga0070661_100476488
277 Ga0070668_100605259
278 Ga0070669_100471805
279 Ga0070671_100061409
280 Ga0070673_100444563
281 Ga0070688_100032494
282 Ga0070659_100518194
283 Ga0070667_101468330
284 Ga0070713_100193254
285 Ga0070701_10743464
286 Ga0070700_100004801
287 Ga0070694_100113191
288 Ga0070708_101168593
289 Ga0070662_100328868
290 Ga0068867_100059279
291 Ga0070685_10209917
292 Ga0070698_100456173
293 Ga0070672_101158663
294 Ga0070672_101759715
295 Ga0070695_100495011
296 Ga0070696_100393762
297 Ga0070665_100349092
298 Ga0070665_102404622
299 Ga0068855_100781438
300 Ga0070664_100269355
301 Ga0068856_100018805
302 Ga0070702_101523963
303 Ga0068852_100543328
304 Ga0068864_100337779
305 Ga0068864_100757056
306 Ga0068861_100859847
307 Ga0068861_100976925
308 Ga0068861_101132908
309 Ga0068851_10502239
310 Ga0068870_10404780
311 Ga0068863_100003696
312 Ga0068863_101782736
313 Ga0068858_100009194
314 Ga0068858_100993935
315 Ga0068860_100226373
316 Ga0068862_100857085
317 Ga0081455_10023080
318 Ga0081455_10176639
319 Ga0081540_1002691
320 Ga0070717_10110557
321 Ga0070712_100346828
322 Ga0075367_10159760
323 Ga0075428_100011874
324 Ga0075428_100178939
325 Ga0075428_100436088
326 Ga0075428_102334603
327 Ga0075428_102436034
328 Ga0075431_100217691
329 Ga0075433_10719410
330 Ga0075433_11054128
331 Ga0075434_101406772
332 Ga0075429_100057371
333 Ga0075429_100094926
334 Ga0075429_101380309
335 Ga0075429_101819648
336 Ga0075436_100562933
337 Ga0075435_100137004
338 Ga0075435_101187722
339 Ga0105240_10010385
340 Ga0105240_10366600
341 Ga0111539_10134181
342 Ga0111539_10302785
343 Ga0111539_10701049
344 Ga0111539_10726709
345 Ga0111539_10944365
346 Ga0111539_11477487
347 Ga0111539_11787913
348 Ga0111539_11960619
349 Ga0105245_10077143
350 Ga0105245_10243282
351 Ga0105245_10263800
352 Ga0105247_10593989
353 Ga0114129_10007081
354 Ga0114129_10120365
355 Ga0114129_10746133
356 Ga0114129_11680122
357 Ga0105243_10152846
358 Ga0105241_10027498
359 Ga0105242_10001868
360 Ga0105242_10329468
361 Ga0105242_10546149
362 Ga0105248_10003270
363 Ga0105248_11373507
364 Ga0105238_10006006
365 Ga0105249_10270187
366 Ga0105239_10028915
367 Ga0105239_10189629
368 Ga0105239_10519771
369 Ga0105246_10015519
370 Ga0105246_10203036
371 Ga0105246_11090847
372 Ga0157371_10005664
373 Ga0157370_10111169
374 Ga0157369_10027406
375 Ga0157369_10266381
376 Ga0157374_10007355
377 Ga0157374_11585667
378 Ga0163162_10062624
379 Ga0163162_10592911
380 Ga0163162_11168974
381 Ga0157372_10006175
382 Ga0157372_10017130
383 Ga0157375_10371380
384 Ga0157375_10446351
385 Ga0163163_10095599
386 Ga0157380_10005677
387 Ga0157380_10008421
388 Ga0157380_10042543
389 Ga0157380_10265209
390 Ga0157380_10680823
391 Ga0157377_10000821
392 Ga0157377_10053394
393 Ga0157379_10062106
394 Ga0157376_10009362
395 Ga0213876_10144479
396 Ga0207643_10075972
397 Ga0207643_10512167
398 Ga0207693_10844140
399 Ga0207657_10592887
400 Ga0207649_10535600
401 Ga0207650_11027553
402 Ga0207687_10208672
403 Ga0207700_10009948
404 Ga0207700_10181956
405 Ga0207644_10218518
406 Ga0207690_10893586
407 Ga0207706_10071630
408 Ga0207686_10303980
409 Ga0207686_10619785
410 Ga0207670_10298693
411 Ga0207670_10659292
412 Ga0207669_10011091
413 Ga0207704_10708490
414 Ga0207691_11335122
415 Ga0207711_10002984
416 Ga0207667_10592895
417 Ga0207651_10549563
418 Ga0207668_10322896
419 Ga0207703_10106972
420 Ga0207678_11601796
421 Ga0207708_10005291
422 Ga0207648_10077172
423 Ga0207676_11233988
424 Ga0207675_100762140
425 Ga0207675_100962250
426 Ga0207683_10122653
427 Ga0207698_10166464
428 Ga0207428_10006497
429 Ga0207428_10063632
430 Ga0268266_10439523
431 Ga0268265_10416144
432 Ga0307517_10074078
433 Ga0307515_10737713
434 Ga0265338_10548675
435 Ga0265320_10336427
436 Ga0307513_10128622
437 Ga0307508_10213674
438 Ga0307410_10066063
439 Ga0307407_10823702
440 Ga0307412_10046308
441 Ga0307409_100216263
442 Ga0307416_100686289
443 Ga0307411_10022470
444 Ga0307411_10535196
445 Ga0307411_10880386
446 Ga0307415_101520543
447 Ga0373934_0313227
448 Ga0373952_0127276
449 Ga0373957_0159836
450 Ga0373927_0000001
451 Ga0373933_0006321
452 Ga0373937_0030417
453 Ga0373937_1604674
454 Ga0395900_0460214
455 Ga0436365_1626007
456 Ga0451835_0070002
457 Ga0451835_0187096
458 Ga0451853_0477880
459 Ga0451853_3842077
460 Ga0439450_069922
461 Ga0439455_0157634
462 Ga0439459_0202698
463 Ga0451577_0080228
464 Ga0453683_0441245
465 Ga0453683_0529261
466 Ga0453684_0352304
467 Ga0466967_0311725
468 Ga0495603_0049979
469 Ga0495651_0006446
470 Ga0495582_0483469
471 Ga0495584_0380416
472 Ga0495594_0358852
473 Ga0495628_0022970
474 Ga0495630_0102900
475 Ga0495631_0120055
476 Ga0495663_0323583
477 Ga0495652_0018170
478 Ga0495597_0365843
479 Ga0495645_0003822
480 Ga0495667_0051433
481 Ga0495656_0320197
482 Ga0495661_0503446
483 Ga0495588_0093478
484 Ga0495588_0671918
485 Ga0495623_0002196
486 Ga0495670_0370552
487 Ga0495600_0006903
488 Ga0495581_0418691
489 Ga0495581_0725312
490 Ga0495675_0125570
491 Ga0495684_0199388
492 Ga0496107_0256948
493 Ga0496110_0824741
494 Ga0501298_155511
495 Ga0501034_0063326
496 Ga0501039_1499954
497 Ga0501046_0120135
498 Ga0501047_0059125
499 Ga0501074_0100734
500 Ga0501080_0766583
501 nmdc:mga05p37_351044_c1
502 nmdc:mga09592_105360_c1
503 nmdc:mga09592_390332_c1
504 nmdc:mga06r32_289696_c1
505 nmdc:mga08y16_1207829_c1
506 nmdc:mga08y16_158883_c1
507 nmdc:mga08y16_322240_c1
508 nmdc:mga08y16_475486_c1
509 nmdc:mga08y16_808546_c1
510 nmdc:mga0n895_663652_c1
511 nmdc:mga0rr50_255813_c1
512 nmdc:mga08x19_232613_c1
513 nmdc:mga08x19_265697_c1
514 nmdc:mga0a205_124485_c1
515 nmdc:mga0a205_1528164_c1
516 nmdc:mga0sz30_233906_c1
517 Ga0495619_0068812
518 Ga0500595_150008
519 Ga0500588_0010403
520 Ga0590071_000061
521 Ga0590071_131442
522 Ga0590074_000200
523 Ga0590075_000074
524 Ga0590075_117396
525 Ga0590077_050556
526 2644169035
527 2644347586
528 8005401645

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01042

Ribonuc_L-PSP

Endoribonuclease L-PSP

29

146

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jd1-assembly1.cif.gz_F crystal structure of yeo7_yeast 0.9484 2 125
6tcc-assembly1.cif.gz_A crystal structure of salmo salar rida-1 0.9445 3 125
5yu2-assembly1.cif.gz_B structure of ribonuclease yabj 0.939 4 125
3quw-assembly1.cif.gz_A crystal structure of yeast mmf1 0.9389 2 125
3l7q-assembly2.cif.gz_E crystal structure of aldr from streptococcus mutans 0.9369 4 125
ID Description Score Start End Superfamily
1jd1F00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9484 2 125 3.30.1330.40
af_Q86KR5_2_129_3.30.1330.40 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.943 1 125 3.30.1330.40
5hp8A00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9348 19 126 3.30.1330.40
3mqwD00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.934 3 126 3.30.1330.40
2dyyG00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9334 4 126 3.30.1330.40
ID Description Score Start End GO Terms
AF-A0A1F8R9S1-F1-model_v4 Reactive intermediate/imine deaminase 0.9985 18 126 GO:0005829
GO:0019239
AF-A0A1F8R9S1-F1-model_v4 Reactive intermediate/imine deaminase 0.9805 18 126 GO:0005829
GO:0019239
AF-A0A6M4GVA3-F1-model_v4 Aminoacrylate peracid reductase RutC (EC 1.-.-.-) 0.9787 1 126 GO:0005829
GO:0016491
GO:0019239
AF-A0A525JTK2-F1-model_v4 RidA family protein 0.9745 1 126 GO:0005829
GO:0019239
AF-M5FFF6-F1-model_v4 Endoribonuclease L-PSP (Modular protein) 0.9734 2 126 GO:0005829
GO:0019239

Map