F371277

General Info

Members Datasets Scaffolds Average Seq Length
262 161 524 179

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0054111|Ga0451577_0054111_2309_2860
Length 183
Sequence MDTNVLANLANEDHSQYLSFFIADEEFAVKILKAREILEYGTVTKVPGAPPTVRGVINLRGSVVPVVDLALKFGLPEREVTKRTCVVIVEVVQGEEKTTMGVIVDSISQVVELPQEQIEPAPDFGTKVKLEYLLGMGRSGKKFVMVLDIDKALSPSELSSVTAIAGQAAAEAAPEGAGARQGD

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
36 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
62 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
63 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
64 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
65 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
66 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
86 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
103 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
109 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
110 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
117 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
118 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
119 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
122 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
123 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
124 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
137 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
138 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
145 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
146 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
147 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
148 2643221664 Massilia sp. Root418 Isolate Unclassified
149 2738541280 Massilia sp. GV090 Isolate Unclassified
150 2738541300 Massilia sp. GV016 Isolate Unclassified
151 2738543018 Massilia sp. GV045 Isolate Unclassified
152 2738543030 Massilia sp. GV097 Isolate Unclassified
153 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
154 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
155 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
156 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
157 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
158 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
159 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
160 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
161 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.37
Metatranscriptomes 2.29
Isolates 5.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.25
Nodule 0
Rhizoplane 0.38
Rhizosphere 83.21
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0054111 3300042876 Bacteria 3583
2 rootH1_10034116 3300003316 Bacteria 3480
3 rootH1_10044832 3300003316 Bacteria 1831
4 rootH1_10048476 3300003316 Bacteria 1185
5 rootL2_10000760 3300003322 Bacteria 1833
6 rootL2_10255970 3300003322 Bacteria 1238
7 Ga0007409J51694_1070555 3300003575 Bacteria 887
8 Ga0055524_1000003 3300003775 Bacteria 399748
9 Ga0065704_10453154 3300005289 Bacteria 703
10 Ga0070658_10227294 3300005327 Bacteria 1579
11 Ga0070670_100004837 3300005331 Bacteria 11322
12 Ga0068868_100472744 3300005338 Bacteria 1094
13 Ga0070687_100031941 3300005343 Bacteria 2586
14 Ga0070659_100342619 3300005366 Bacteria 1253
15 Ga0070698_100738814 3300005471 Unclassified 927
16 Ga0068853_100001363 3300005539 Bacteria 17616
17 Ga0070696_100547749 3300005546 Bacteria 926
18 Ga0070665_100009168 3300005548 Bacteria 10021
19 Ga0068855_100001305 3300005563 Bacteria 30883
20 Ga0068855_100006233 3300005563 Bacteria 14538
21 Ga0068855_100179328 3300005563 Bacteria 2395
22 Ga0068855_100592763 3300005563 Bacteria 1196
23 Ga0068855_101652370 3300005563 Bacteria 654
24 Ga0070664_100214298 3300005564 Bacteria 1721
25 Ga0068859_100002551 3300005617 Bacteria 18483
26 Ga0068861_100004595 3300005719 Bacteria 9264
27 Ga0068861_102324493 3300005719 Bacteria 538
28 Ga0075365_10720431 3300006038 Bacteria 705
29 Ga0075368_10116804 3300006042 Bacteria 1103
30 Ga0075369_10136709 3300006186 Bacteria 1116
31 Ga0075366_10181467 3300006195 Bacteria 1279
32 Ga0075366_10386751 3300006195 Bacteria 860
33 Ga0075370_10550081 3300006353 Bacteria 698
34 Ga0097620_100002551 3300006931 Bacteria 18483
35 Ga0105251_10000013 3300009011 Bacteria 163226
36 Ga0105240_10000962 3300009093 Bacteria 51334
37 Ga0105245_11373584 3300009098 Bacteria 756
38 Ga0114129_10568869 3300009147 Bacteria 1472
39 Ga0105237_10006489 3300009545 Bacteria 12969
40 Ga0105238_10008338 3300009551 Bacteria 10367
41 Ga0105238_10384305 3300009551 Bacteria 1396
42 Ga0105238_11144676 3300009551 Bacteria 801
43 Ga0157378_10324323 3300013297 Bacteria 1497
44 Ga0197907_10359606 3300020069 Bacteria 745
45 Ga0206353_11075698 3300020082 Bacteria 1516
46 Ga0213872_10000106 3300021361 Bacteria 77503
47 Ga0213872_10000143 3300021361 Bacteria 64736
48 Ga0224712_10080923 3300022467 Bacteria 1340
49 Ga0209563_100003 3300025230 Bacteria 1932942
50 Ga0209677_104340 3300025253 Bacteria 4133
51 Ga0209675_1022199 3300025291 Bacteria 1674
52 Ga0209564_1040746 3300025295 Bacteria 1257
53 Ga0209256_1000007 3300025299 Bacteria 1136599
54 Ga0207713_1000445 3300025735 Bacteria 43504
55 Ga0207695_10032477 3300025913 Bacteria 5711
56 Ga0207695_10660570 3300025913 Bacteria 926
57 Ga0207671_10168837 3300025914 Bacteria 1698
58 Ga0207662_10082318 3300025918 Bacteria 1966
59 Ga0207649_10000383 3300025920 Bacteria 33085
60 Ga0207649_10423327 3300025920 Bacteria 1000
61 Ga0207694_10005685 3300025924 Bacteria 9563
62 Ga0207694_10310940 3300025924 Bacteria 1299
63 Ga0207694_10867487 3300025924 Bacteria 763
64 Ga0207650_10044730 3300025925 Bacteria 3254
65 Ga0207690_10343697 3300025932 Bacteria 1178
66 Ga0207679_10000056 3300025945 Bacteria 108254
67 Ga0207679_10160859 3300025945 Bacteria 1838
68 Ga0207667_10002958 3300025949 Bacteria 21088
69 Ga0207667_10149423 3300025949 Bacteria 2405
70 Ga0207667_10510041 3300025949 Bacteria 1219
71 Ga0207640_10357566 3300025981 Bacteria 1175
72 Ga0207639_10003300 3300026041 Bacteria 10857
73 Ga0207678_10326441 3300026067 Bacteria 1321
74 Ga0207708_10720351 3300026075 Bacteria 854
75 Ga0207674_10184147 3300026116 Bacteria 2039
76 Ga0207675_100070760 3300026118 Bacteria 3260
77 Ga0207675_101503463 3300026118 Bacteria 694
78 Ga0209813_10060477 3300027866 Bacteria 1208
79 Ga0268266_10011142 3300028379 Bacteria 7829
80 Ga0268264_10597680 3300028381 Bacteria 1087
81 Ga0265334_10010119 3300028573 Bacteria 3981
82 Ga0265318_10000121 3300028577 Bacteria 72340
83 Ga0265318_10044568 3300028577 Bacteria 1678
84 Ga0265324_10134990 3300029957 Bacteria 838
85 Ga0307511_10000873 3300030521 Bacteria 32069
86 Ga0265330_10001905 3300031235 Bacteria 11608
87 Ga0265332_10001688 3300031238 Bacteria 12070
88 Ga0265332_10134175 3300031238 Bacteria 1038
89 Ga0265328_10000395 3300031239 Bacteria 20426
90 Ga0265328_10002641 3300031239 Bacteria 8011
91 Ga0265328_10068982 3300031239 Bacteria 1299
92 Ga0265320_10001444 3300031240 Bacteria 17300
93 Ga0265320_10004130 3300031240 Bacteria 9539
94 Ga0265329_10000137 3300031242 Bacteria 35158
95 Ga0265339_10003868 3300031249 Bacteria 10394
96 Ga0265331_10004316 3300031250 Bacteria 8902
97 Ga0265327_10011033 3300031251 Bacteria 6282
98 Ga0265327_10021900 3300031251 Bacteria 3841
99 Ga0265327_10050518 3300031251 Bacteria 2175
100 Ga0265327_10073567 3300031251 Bacteria 1704
101 Ga0265327_10116100 3300031251 Bacteria 1273
102 Ga0265327_10213083 3300031251 Bacteria 871
103 Ga0265316_10041910 3300031344 Bacteria 3660
104 Ga0265316_10079148 3300031344 Bacteria 2522
105 Ga0265316_10231501 3300031344 Bacteria 1360
106 Ga0265316_10411368 3300031344 Bacteria 973
107 Ga0265313_10008528 3300031595 Bacteria 6796
108 Ga0307508_10112042 3300031616 Bacteria 2328
109 Ga0265314_10023816 3300031711 Bacteria 4656
110 Ga0265314_10033067 3300031711 Bacteria 3797
111 Ga0265314_10044147 3300031711 Bacteria 3162
112 Ga0265342_10000584 3300031712 Bacteria 38397
113 Ga0265342_10001069 3300031712 Bacteria 26603
114 Ga0316593_10055578 3300032168 Bacteria 1345
115 Ga0373925_0445620 3300037068 Unclassified 1060
116 Ga0395899_0000506 3300037312 Bacteria 43276
117 Ga0395899_0000932 3300037312 Bacteria 27574
118 Ga0395899_0005670 3300037312 Bacteria 9695
119 Ga0395899_0008437 3300037312 Bacteria 7936
120 Ga0395899_0034205 3300037312 Bacteria 3815
121 Ga0395899_0077869 3300037312 Bacteria 2417
122 Ga0395900_0000171 3300037418 Bacteria 105316
123 Ga0395900_0095069 3300037418 Bacteria 3061
124 Ga0395900_0132349 3300037418 Bacteria 2555
125 Ga0395900_0270921 3300037418 Bacteria 1692
126 Ga0395898_0008607 3300037466 Bacteria 10768
127 Ga0395898_0035755 3300037466 Bacteria 4935
128 Ga0395901_0001324 3300038443 Bacteria 26083
129 Ga0395901_0261998 3300038443 Bacteria 1799
130 Ga0395901_0493388 3300038443 Bacteria 1247
131 Ga0436361_0081808 3300039447 Bacteria 4858
132 Ga0436361_0152690 3300039447 Bacteria 36214
133 Ga0436361_0669746 3300039447 Bacteria 73604
134 Ga0439466_0000288 3300041411 Bacteria 19602
135 Ga0451855_1600169 3300041511 Bacteria 628
136 Ga0451577_0001633 3300042876 Bacteria 29105
137 Ga0451577_0006843 3300042876 Bacteria 11291
138 Ga0451577_0018848 3300042876 Bacteria 6352
139 Ga0451577_0100087 3300042876 Bacteria 2589
140 Ga0451577_0158457 3300042876 Bacteria 2038
141 Ga0451577_0185966 3300042876 Bacteria 1873
142 Ga0451577_0197136 3300042876 Bacteria 1817
143 Ga0466969_0077515 3300044656 Bacteria 1590
144 Ga0466972_0022939 3300044658 Bacteria 3106
145 Ga0466972_0040183 3300044658 Bacteria 2279
146 Ga0466972_0049999 3300044658 Bacteria 2019
147 Ga0466972_0077890 3300044658 Bacteria 1579
148 Ga0453683_0072796 3300044673 Bacteria 2151
149 Ga0466965_0023151 3300044683 Bacteria 2998
150 Ga0466965_0075828 3300044683 Bacteria 1696
151 Ga0466965_0222401 3300044683 Bacteria 1006
152 Ga0466966_0021728 3300044684 Bacteria 4213
153 Ga0466966_0063862 3300044684 Bacteria 2319
154 Ga0466966_0067376 3300044684 Bacteria 2248
155 Ga0466961_0022418 3300044693 Bacteria 4062
156 Ga0466961_0110176 3300044693 Bacteria 1732
157 Ga0453684_0000195 3300044712 Bacteria 265496
158 Ga0453684_0023299 3300044712 Bacteria 9131
159 Ga0453684_0033728 3300044712 Bacteria 7127
160 Ga0453684_0052793 3300044712 Bacteria 5311
161 Ga0453684_0201076 3300044712 Bacteria 2322
162 Ga0453684_0286320 3300044712 Bacteria 1877
163 Ga0453684_0585312 3300044712 Bacteria 1225
164 Ga0453684_0760690 3300044712 Bacteria 1048
165 Ga0466971_0044585 3300044719 Bacteria 1991
166 Ga0466971_0073067 3300044719 Bacteria 1558
167 Ga0466971_0119887 3300044719 Bacteria 1217
168 Ga0466968_0086076 3300044735 Bacteria 1387
169 Ga0466968_0143800 3300044735 Bacteria 1092
170 Ga0466970_0039471 3300044765 Bacteria 2505
171 Ga0466957_0457335 3300044842 Bacteria 880
172 Ga0466960_0155910 3300044901 Bacteria 1223
173 Ga0466959_0016302 3300045049 Bacteria 5426
174 Ga0466959_0031028 3300045049 Bacteria 3956
175 Ga0466959_0249767 3300045049 Bacteria 1223
176 Ga0451576_0000304 3300045051 Bacteria 119160
177 Ga0451576_0001283 3300045051 Bacteria 43698
178 Ga0451576_0003142 3300045051 Bacteria 23135
179 Ga0451576_0003510 3300045051 Bacteria 21433
180 Ga0451576_0005724 3300045051 Bacteria 15483
181 Ga0451576_0009804 3300045051 Bacteria 11067
182 Ga0451576_0080987 3300045051 Bacteria 3377
183 Ga0451576_0095106 3300045051 Bacteria 3099
184 Ga0451576_0210688 3300045051 Bacteria 2029
185 Ga0451576_0231819 3300045051 Bacteria 1929
186 Ga0451576_0266010 3300045051 Bacteria 1792
187 Ga0451576_0395674 3300045051 Bacteria 1448
188 Ga0451576_0443502 3300045051 Bacteria 1362
189 Ga0451576_0555327 3300045051 Bacteria 1206
190 Ga0451576_0613294 3300045051 Bacteria 1143
191 Ga0466967_0157883 3300045976 Bacteria 2126
192 Ga0495605_0003399 3300046474 Bacteria 9488
193 Ga0495584_0125556 3300046491 Bacteria 1300
194 Ga0495607_0183783 3300046501 Bacteria 1046
195 Ga0495583_0000057 3300046506 Bacteria 200688
196 Ga0495583_0111088 3300046506 Bacteria 1161
197 Ga0495606_0010669 3300046507 Bacteria 7595
198 Ga0495606_0031045 3300046507 Bacteria 3720
199 Ga0495616_0106150 3300046513 Bacteria 1310
200 Ga0495644_0000127 3300046523 Bacteria 36626
201 Ga0495644_0001757 3300046523 Bacteria 8743
202 Ga0495648_0020178 3300046524 Bacteria 4659
203 Ga0495642_0055714 3300046528 Bacteria 1632
204 Ga0495609_0002272 3300046538 Bacteria 11983
205 Ga0495609_0004244 3300046538 Bacteria 7918
206 Ga0495633_0002526 3300046558 Bacteria 12862
207 Ga0495668_0016183 3300046616 Bacteria 4338
208 Ga0495611_0011420 3300046648 Bacteria 3765
209 Ga0495625_0027165 3300046660 Bacteria 4314
210 Ga0495625_0245246 3300046660 Bacteria 1164
211 Ga0495659_0000016 3300046664 Bacteria 75867
212 Ga0495659_0000324 3300046664 Bacteria 18834
213 Ga0495671_0000207 3300046692 Bacteria 51661
214 Ga0495660_0013135 3300046810 Bacteria 4799
215 Ga0495672_0000725 3300047320 Bacteria 36302
216 Ga0495683_0009306 3300047323 Bacteria 5234
217 Ga0495687_002676 3300047443 Bacteria 13871
218 Ga0495687_007585 3300047443 Bacteria 6359
219 Ga0495677_0086341 3300047445 Bacteria 1179
220 Ga0495685_000006 3300047447 Bacteria 110665
221 Ga0495673_0004765 3300047469 Bacteria 8402
222 Ga0495686_0221004 3300047472 Bacteria 1077
223 Ga0495626_0151950 3300048091 Bacteria 975
224 Ga0496102_0005632 3300048905 Bacteria 10632
225 Ga0496117_0004546 3300048920 Bacteria 15212
226 Ga0496118_0022107 3300048921 Bacteria 5573
227 Ga0496119_0001051 3300048922 Bacteria 35304
228 Ga0496119_0002509 3300048922 Bacteria 20054
229 Ga0496120_0000146 3300048923 Bacteria 119164
230 Ga0496120_0001717 3300048923 Bacteria 24994
231 Ga0496122_0002639 3300048925 Bacteria 25053
232 Ga0496123_0002156 3300048926 Bacteria 25152
233 Ga0496124_0002332 3300048927 Bacteria 25058
234 Ga0501309_002470 3300049129 Bacteria 1994
235 Ga0495682_0002669 3300049460 Bacteria 8325
236 Ga0501222_000022 3300049662 Bacteria 66333
237 Ga0501279_005988 3300049775 Bacteria 1603
238 nmdc:mga0k408_209708_c1 3300050493 Bacteria 1163
239 nmdc:mga07m45_536767_c1 3300050496 Bacteria 677
240 nmdc:mga05p37_540788_c1 3300050507 Bacteria 1328
241 Ga0500646_0002114 3300053090 Bacteria 5187
242 Ga0500583_0074481 3300053092 Bacteria 1629
243 Ga0500655_020895 3300053133 Bacteria 1225
244 Ga0500637_0187780 3300053178 Bacteria 1182
245 Ga0590071_011755 3300059421 Bacteria 2048
246 Ga0466962_0064108 3300061719 Bacteria 1754
247 Ga0466962_0161846 3300061719 Bacteria 1088
248 Ga0466962_0217350 3300061719 Bacteria 935
249 2644358686 2643221664 Bacteria 7272945
250 2738739593 2738541280 Bacteria 6630198
251 2738846168 2738541300 Bacteria 6675882
252 2739275680 2738543018 Bacteria 6718814
253 2739344724 2738543030 Bacteria 6719714
254 2808855272 2808606361 Bacteria 6136259
255 2808922994 2808606376 Bacteria 6248667
256 2808935152 2808606378 Bacteria 6177535
257 2808945132 2808606380 Bacteria 6248705
258 2808963777 2808606383 Bacteria 6138645
259 2808998665 2808606389 Bacteria 6138126
260 2919134534 2919130084 Bacteria 5301837
261 2929196962 2929195423 Bacteria 5325372
262 639785515 639633007 Bacteria 4376040
263 Ga0451577_0054111
264 rootH1_10034116
265 rootH1_10044832
266 rootH1_10048476
267 rootL2_10000760
268 rootL2_10255970
269 Ga0007409J51694_1070555
270 Ga0055524_1000003
271 Ga0065704_10453154
272 Ga0070658_10227294
273 Ga0070670_100004837
274 Ga0068868_100472744
275 Ga0070687_100031941
276 Ga0070659_100342619
277 Ga0070698_100738814
278 Ga0068853_100001363
279 Ga0070696_100547749
280 Ga0070665_100009168
281 Ga0068855_100001305
282 Ga0068855_100006233
283 Ga0068855_100179328
284 Ga0068855_100592763
285 Ga0068855_101652370
286 Ga0070664_100214298
287 Ga0068859_100002551
288 Ga0068861_100004595
289 Ga0068861_102324493
290 Ga0075365_10720431
291 Ga0075368_10116804
292 Ga0075369_10136709
293 Ga0075366_10181467
294 Ga0075366_10386751
295 Ga0075370_10550081
296 Ga0097620_100002551
297 Ga0105251_10000013
298 Ga0105240_10000962
299 Ga0105245_11373584
300 Ga0114129_10568869
301 Ga0105237_10006489
302 Ga0105238_10008338
303 Ga0105238_10384305
304 Ga0105238_11144676
305 Ga0157378_10324323
306 Ga0197907_10359606
307 Ga0206353_11075698
308 Ga0213872_10000106
309 Ga0213872_10000143
310 Ga0224712_10080923
311 Ga0209563_100003
312 Ga0209677_104340
313 Ga0209675_1022199
314 Ga0209564_1040746
315 Ga0209256_1000007
316 Ga0207713_1000445
317 Ga0207695_10032477
318 Ga0207695_10660570
319 Ga0207671_10168837
320 Ga0207662_10082318
321 Ga0207649_10000383
322 Ga0207649_10423327
323 Ga0207694_10005685
324 Ga0207694_10310940
325 Ga0207694_10867487
326 Ga0207650_10044730
327 Ga0207690_10343697
328 Ga0207679_10000056
329 Ga0207679_10160859
330 Ga0207667_10002958
331 Ga0207667_10149423
332 Ga0207667_10510041
333 Ga0207640_10357566
334 Ga0207639_10003300
335 Ga0207678_10326441
336 Ga0207708_10720351
337 Ga0207674_10184147
338 Ga0207675_100070760
339 Ga0207675_101503463
340 Ga0209813_10060477
341 Ga0268266_10011142
342 Ga0268264_10597680
343 Ga0265334_10010119
344 Ga0265318_10000121
345 Ga0265318_10044568
346 Ga0265324_10134990
347 Ga0307511_10000873
348 Ga0265330_10001905
349 Ga0265332_10001688
350 Ga0265332_10134175
351 Ga0265328_10000395
352 Ga0265328_10002641
353 Ga0265328_10068982
354 Ga0265320_10001444
355 Ga0265320_10004130
356 Ga0265329_10000137
357 Ga0265339_10003868
358 Ga0265331_10004316
359 Ga0265327_10011033
360 Ga0265327_10021900
361 Ga0265327_10050518
362 Ga0265327_10073567
363 Ga0265327_10116100
364 Ga0265327_10213083
365 Ga0265316_10041910
366 Ga0265316_10079148
367 Ga0265316_10231501
368 Ga0265316_10411368
369 Ga0265313_10008528
370 Ga0307508_10112042
371 Ga0265314_10023816
372 Ga0265314_10033067
373 Ga0265314_10044147
374 Ga0265342_10000584
375 Ga0265342_10001069
376 Ga0316593_10055578
377 Ga0373925_0445620
378 Ga0395899_0000506
379 Ga0395899_0000932
380 Ga0395899_0005670
381 Ga0395899_0008437
382 Ga0395899_0034205
383 Ga0395899_0077869
384 Ga0395900_0000171
385 Ga0395900_0095069
386 Ga0395900_0132349
387 Ga0395900_0270921
388 Ga0395898_0008607
389 Ga0395898_0035755
390 Ga0395901_0001324
391 Ga0395901_0261998
392 Ga0395901_0493388
393 Ga0436361_0081808
394 Ga0436361_0152690
395 Ga0436361_0669746
396 Ga0439466_0000288
397 Ga0451855_1600169
398 Ga0451577_0001633
399 Ga0451577_0006843
400 Ga0451577_0018848
401 Ga0451577_0100087
402 Ga0451577_0158457
403 Ga0451577_0185966
404 Ga0451577_0197136
405 Ga0466969_0077515
406 Ga0466972_0022939
407 Ga0466972_0040183
408 Ga0466972_0049999
409 Ga0466972_0077890
410 Ga0453683_0072796
411 Ga0466965_0023151
412 Ga0466965_0075828
413 Ga0466965_0222401
414 Ga0466966_0021728
415 Ga0466966_0063862
416 Ga0466966_0067376
417 Ga0466961_0022418
418 Ga0466961_0110176
419 Ga0453684_0000195
420 Ga0453684_0023299
421 Ga0453684_0033728
422 Ga0453684_0052793
423 Ga0453684_0201076
424 Ga0453684_0286320
425 Ga0453684_0585312
426 Ga0453684_0760690
427 Ga0466971_0044585
428 Ga0466971_0073067
429 Ga0466971_0119887
430 Ga0466968_0086076
431 Ga0466968_0143800
432 Ga0466970_0039471
433 Ga0466957_0457335
434 Ga0466960_0155910
435 Ga0466959_0016302
436 Ga0466959_0031028
437 Ga0466959_0249767
438 Ga0451576_0000304
439 Ga0451576_0001283
440 Ga0451576_0003142
441 Ga0451576_0003510
442 Ga0451576_0005724
443 Ga0451576_0009804
444 Ga0451576_0080987
445 Ga0451576_0095106
446 Ga0451576_0210688
447 Ga0451576_0231819
448 Ga0451576_0266010
449 Ga0451576_0395674
450 Ga0451576_0443502
451 Ga0451576_0555327
452 Ga0451576_0613294
453 Ga0466967_0157883
454 Ga0495605_0003399
455 Ga0495584_0125556
456 Ga0495607_0183783
457 Ga0495583_0000057
458 Ga0495583_0111088
459 Ga0495606_0010669
460 Ga0495606_0031045
461 Ga0495616_0106150
462 Ga0495644_0000127
463 Ga0495644_0001757
464 Ga0495648_0020178
465 Ga0495642_0055714
466 Ga0495609_0002272
467 Ga0495609_0004244
468 Ga0495633_0002526
469 Ga0495668_0016183
470 Ga0495611_0011420
471 Ga0495625_0027165
472 Ga0495625_0245246
473 Ga0495659_0000016
474 Ga0495659_0000324
475 Ga0495671_0000207
476 Ga0495660_0013135
477 Ga0495672_0000725
478 Ga0495683_0009306
479 Ga0495687_002676
480 Ga0495687_007585
481 Ga0495677_0086341
482 Ga0495685_000006
483 Ga0495673_0004765
484 Ga0495686_0221004
485 Ga0495626_0151950
486 Ga0496102_0005632
487 Ga0496117_0004546
488 Ga0496118_0022107
489 Ga0496119_0001051
490 Ga0496119_0002509
491 Ga0496120_0000146
492 Ga0496120_0001717
493 Ga0496122_0002639
494 Ga0496123_0002156
495 Ga0496124_0002332
496 Ga0501309_002470
497 Ga0495682_0002669
498 Ga0501222_000022
499 Ga0501279_005988
500 nmdc:mga0k408_209708_c1
501 nmdc:mga07m45_536767_c1
502 nmdc:mga05p37_540788_c1
503 Ga0500646_0002114
504 Ga0500583_0074481
505 Ga0500655_020895
506 Ga0500637_0187780
507 Ga0590071_011755
508 Ga0466962_0064108
509 Ga0466962_0161846
510 Ga0466962_0217350
511 2644358686
512 2738739593
513 2738846168
514 2739275680
515 2739344724
516 2808855272
517 2808922994
518 2808935152
519 2808945132
520 2808963777
521 2808998665
522 2919134534
523 2929196962
524 639785515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01584

CheW

CheW-like domain

16

157

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qdl-assembly2.cif.gz_B crystal structure of scaffolding protein ttchew from thermoanaerobacter tengcongensis 0.8333 25 168
4jpb-assembly1.cif.gz_W the structure of a ternary complex between chea domains p4 and p5 with chew and with an unzipped fragment of tm14, a chemoreceptor analog from thermotoga maritima. 0.8276 26 167
3ja6-assembly1.cif.gz_F cryo-electron tomography and all-atom molecular dynamics simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling 0.8204 26 170
2qdl-assembly1.cif.gz_A crystal structure of scaffolding protein ttchew from thermoanaerobacter tengcongensis 0.811 25 168
3ja6-assembly1.cif.gz_F cryo-electron tomography and all-atom molecular dynamics simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling 0.7996 26 170
ID Description Score Start End Superfamily
2qdlB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.834 46 116 2.40.50.180
af_P0A964_36_100_2.40.50.180 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.83 46 113 2.40.50.180
af_P0A964_36_100_2.40.50.180 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.8073 46 113 2.40.50.180
2qdlB01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.7991 25 158 2.30.30.40
2qdlB01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.788 25 158 2.30.30.40
ID Description Score Start End GO Terms
AF-A0A5C1QQ67-F1-model_v4 Chemotaxis protein CheW 0.905 26 176 GO:0005829
GO:0006935
GO:0007165
AF-A0A7I9VQJ8-F1-model_v4 Chemotaxis protein CheW 0.898 26 175 GO:0005829
GO:0006935
GO:0007165
AF-A0A0C5W0X1-F1-model_v4 Chemotaxis protein CheW 0.8963 26 171 GO:0005829
GO:0006935
GO:0007165
AF-A0A356ZB51-F1-model_v4 CheW-like domain-containing protein 0.8963 26 164 GO:0005829
GO:0006935
GO:0007165
AF-A0A5P9HNL5-F1-model_v4 Chemotaxis protein CheW 0.896 26 167 GO:0005829
GO:0006935
GO:0007165

Map