F369906

General Info

Members Datasets Scaffolds Average Seq Length
260 201 238 236

Family's Representative Sequence

Representative Sequence 3300049744|Ga0501083_0045468|Ga0501083_0045468_263_1084
Length 273
Sequence MANKKVFPTVADAFADLKSKGVLRDGMTVMVGGFGLCGIPEKLIGALRDSGVKGLTCISNNAGVDDFGLGLLLQTRQIKKMISSYVGENANFEGQFLKGELEVEFNPQGTLAERIRAGGAGIPAFYTATGVGTPVAAGKEIREFYRPSDDTAHHNRTPLGTSGKYEEMAGRVGPRPESHARRREHVLETGLYADLALVKAHTADGFGNLVYRKTARNFNPMMATAAAFVIAEVERIVEMGELDGDAIHTPGSYVDRVVKTVPEKRIEQRTVSK

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2643221736 Bosea sp. Root483D1 Isolate Unclassified
3 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
4 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
5 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
6 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
7 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
8 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
9 2841760612 Bosea sp. Tri-49 Isolate Nodule
10 2844104063 Bosea sp. Tri-39 Isolate Nodule
11 2851182111 Bosea sp. Tri-44 Isolate Nodule
12 2851246043 Bosea sp. Tri-54 Isolate Nodule
13 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
14 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
15 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
16 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
17 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
18 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
19 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
20 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
21 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
22 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
106 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
107 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
108 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
124 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
138 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049518 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control Metagenome Rhizosphere
154 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
160 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
161 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
162 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
163 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
164 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
165 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
166 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
167 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
175 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
176 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
177 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
178 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
179 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
180 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
181 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
182 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
183 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
184 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
185 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
186 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
187 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
188 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
189 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
190 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
191 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
192 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
193 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
194 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
195 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
196 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
197 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
198 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
201 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.15
Metatranscriptomes 0.38
Isolates 8.46

Biome Distribution

Category Percentage (%)
Aerial Root 1.15
Bulb 0
Endosphere 13.46
Nodule 1.92
Rhizoplane 1.54
Rhizosphere 66.15
Stem 0
Stem Tuber 0
Unclassified 15.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10070132 3300005289 Bacteria 1955461
2 Ga0070690_100001086 3300005330 Bacteria 13964
3 Ga0070689_100030359 3300005340 Bacteria 4102
4 Ga0070689_100088909 3300005340 Bacteria 2432
5 Ga0070671_100058986 3300005355 Bacteria 3194
6 Ga0070674_100201153 3300005356 Bacteria 1538
7 Ga0070674_100405640 3300005356 Bacteria 1115
8 Ga0070659_100004330 3300005366 Bacteria 10137
9 Ga0070701_10082781 3300005438 Bacteria 1741
10 Ga0070700_100184481 3300005441 Bacteria 1454
11 Ga0070663_100008882 3300005455 Bacteria 6204
12 Ga0070706_100163395 3300005467 Bacteria 2079
13 Ga0070698_100001718 3300005471 Bacteria 24414
14 Ga0070699_100314564 3300005518 Bacteria 1406
15 Ga0070679_100694218 3300005530 Bacteria 960
16 Ga0070684_100717100 3300005535 Bacteria 933
17 Ga0070697_100389528 3300005536 Bacteria 1208
18 Ga0068853_100061022 3300005539 Bacteria 3260
19 Ga0070665_100001572 3300005548 Bacteria 26326
20 Ga0068857_100069658 3300005577 Bacteria 3132
21 Ga0068854_100057970 3300005578 Bacteria 2794
22 Ga0068854_100195908 3300005578 Bacteria 1585
23 Ga0068856_100523161 3300005614 Bacteria 1207
24 Ga0068852_100016110 3300005616 Bacteria 5819
25 Ga0068864_100551613 3300005618 Bacteria 1114
26 Ga0075370_10073632 3300006353 Bacteria 1956
27 Ga0068871_100170355 3300006358 Bacteria 1866
28 Ga0075429_100011552 3300006880 Bacteria 7658
29 Ga0075429_100015777 3300006880 Bacteria 6543
30 Ga0075429_100044469 3300006880 Bacteria 3863
31 Ga0075435_100097266 3300007076 Bacteria 2436
32 Ga0105240_10408201 3300009093 Bacteria 1528
33 Ga0105245_10000219 3300009098 Bacteria 54553
34 Ga0105241_10006871 3300009174 Bacteria 8371
35 Ga0105248_10010303 3300009177 Bacteria 10291
36 Ga0105248_10718076 3300009177 Bacteria 1128
37 Ga0105237_10862460 3300009545 Bacteria 912
38 Ga0105238_10058929 3300009551 Bacteria 3848
39 Ga0105249_10007917 3300009553 Bacteria 9261
40 Ga0105249_10107953 3300009553 Bacteria 2627
41 Ga0157374_10183346 3300013296 Bacteria 2046
42 Ga0157374_10485208 3300013296 Bacteria 1239
43 Ga0157374_11025813 3300013296 Bacteria 844
44 Ga0157372_10730169 3300013307 Unclassified 1152
45 Ga0157379_10830986 3300014968 Bacteria 873
46 Ga0157376_10005149 3300014969 Bacteria 9117
47 Ga0207656_10169725 3300025321 Bacteria 1042
48 Ga0207643_10121027 3300025908 Bacteria 1551
49 Ga0207705_10298570 3300025909 Bacteria 1235
50 Ga0207684_10355397 3300025910 Bacteria 1261
51 Ga0207654_10001249 3300025911 Bacteria 13541
52 Ga0207695_10005110 3300025913 Bacteria 17571
53 Ga0207671_10002440 3300025914 Bacteria 19899
54 Ga0207660_10226523 3300025917 Bacteria 1469
55 Ga0207657_10016757 3300025919 Bacteria 7054
56 Ga0207646_10446220 3300025922 Bacteria 1167
57 Ga0207694_10044470 3300025924 Bacteria 3429
58 Ga0207687_10000074 3300025927 Bacteria 73639
59 Ga0207690_10000052 3300025932 Bacteria 106112
60 Ga0207706_10014213 3300025933 Bacteria 7216
61 Ga0207670_10006517 3300025936 Bacteria 6481
62 Ga0207670_10036295 3300025936 Bacteria 3204
63 Ga0207670_10123312 3300025936 Bacteria 1887
64 Ga0207689_10562026 3300025942 Bacteria 958
65 Ga0207712_10027516 3300025961 Bacteria 3798
66 Ga0207712_10074652 3300025961 Bacteria 2449
67 Ga0207640_10018210 3300025981 Bacteria 4123
68 Ga0207658_10150256 3300025986 Bacteria 1897
69 Ga0207703_10023300 3300026035 Bacteria 4863
70 Ga0207639_10009300 3300026041 Bacteria 6776
71 Ga0207678_10010220 3300026067 Bacteria 8238
72 Ga0207708_10205613 3300026075 Bacteria 1572
73 Ga0207702_10170967 3300026078 Bacteria 1993
74 Ga0207641_10017641 3300026088 Bacteria 5846
75 Ga0207641_10714954 3300026088 Bacteria 987
76 Ga0207648_10349214 3300026089 Bacteria 1333
77 Ga0207676_10743887 3300026095 Bacteria 953
78 Ga0207674_10114069 3300026116 Bacteria 2675
79 Ga0207683_10003617 3300026121 Bacteria 13454
80 Ga0207698_10016454 3300026142 Bacteria 4986
81 Ga0209998_10010000 3300027717 Bacteria 1965
82 Ga0268266_10002674 3300028379 Bacteria 18751
83 Ga0268265_10889408 3300028380 Bacteria 874
84 Ga0268264_10396787 3300028381 Bacteria 1325
85 Ga0307517_10060772 3300028786 Bacteria 3588
86 Ga0307515_10007755 3300028794 Bacteria 21128
87 Ga0265338_10191572 3300028800 Bacteria 1549
88 Ga0265332_10001813 3300031238 Bacteria 11488
89 Ga0307513_10088520 3300031456 Bacteria 3164
90 Ga0307513_10147129 3300031456 Bacteria 2272
91 Ga0307509_10059028 3300031507 Bacteria 4060
92 Ga0307509_10066129 3300031507 Bacteria 3794
93 Ga0307509_10122660 3300031507 Bacteria 2573
94 Ga0307509_10168736 3300031507 Bacteria 2072
95 Ga0307508_10035759 3300031616 Bacteria 4475
96 Ga0316578_10093947 3300031728 Bacteria 1794
97 Ga0307516_10005782 3300031730 Bacteria 14650
98 Ga0307516_10028363 3300031730 Bacteria 5665
99 Ga0307516_10102590 3300031730 Bacteria 2675
100 Ga0307405_10237367 3300031731 Bacteria 1348
101 Ga0307406_10002926 3300031901 Bacteria 9297
102 Ga0307507_10030485 3300033179 Bacteria 5689
103 Ga0307510_10002345 3300033180 Bacteria 21401
104 Ga0307510_10016230 3300033180 Bacteria 8795
105 Ga0373949_0000841 3300035090 Bacteria 9797
106 Ga0373939_0015980 3300035114 Bacteria 1973
107 Ga0373961_0000145 3300035241 Bacteria 34776
108 Ga0316582_0045569 3300036647 Bacteria 2762
109 Ga0395899_0030471 3300037312 Bacteria 4057
110 Ga0395900_0010640 3300037418 Bacteria 9408
111 Ga0395898_0101103 3300037466 Bacteria 2769
112 Ga0395905_0245957 3300037471 Bacteria 1671
113 Ga0395901_0061867 3300038443 Bacteria 3895
114 Ga0395901_0310639 3300038443 Bacteria 1633
115 Ga0395901_0318793 3300038443 Bacteria 1609
116 Ga0436365_0682862 3300039437 Bacteria 1101
117 Ga0451853_3066747 3300041512 Bacteria 1051
118 Ga0466967_0213720 3300045976 Bacteria 1830
119 Ga0495627_000235 3300046453 Bacteria 58405
120 Ga0495627_000960 3300046453 Bacteria 19741
121 Ga0495629_0293209 3300046459 Bacteria 1115
122 Ga0495638_0000016 3300046460 Bacteria 396505
123 Ga0495650_0001769 3300046471 Bacteria 19623
124 Ga0495650_0054536 3300046471 Bacteria 1631
125 Ga0495650_0131260 3300046471 Bacteria 913
126 Ga0495607_0011691 3300046501 Bacteria 5827
127 Ga0495610_0000391 3300046512 Bacteria 45340
128 Ga0495610_0238935 3300046512 Bacteria 725
129 Ga0495616_0000015 3300046513 Bacteria 187751
130 Ga0495620_0029639 3300046515 Bacteria 2530
131 Ga0495632_0000053 3300046519 Bacteria 131977
132 Ga0495632_0004464 3300046519 Bacteria 9504
133 Ga0495643_0000298 3300046522 Bacteria 69615
134 Ga0495648_0000013 3300046524 Bacteria 289090
135 Ga0495648_0000629 3300046524 Bacteria 37651
136 Ga0495663_0000012 3300046525 Bacteria 157546
137 Ga0495597_0000849 3300046542 Bacteria 24017
138 Ga0495622_0005838 3300046557 Bacteria 5713
139 Ga0495633_0013312 3300046558 Bacteria 4339
140 Ga0495633_0013388 3300046558 Bacteria 4325
141 Ga0495656_0000775 3300046615 Bacteria 10287
142 Ga0495670_0227098 3300046691 Bacteria 992
143 Ga0495671_0000018 3300046692 Bacteria 291470
144 Ga0495636_0009476 3300047318 Bacteria 3837
145 Ga0495687_129970 3300047443 Bacteria 893
146 Ga0495673_0000130 3300047469 Bacteria 138192
147 Ga0495673_0086073 3300047469 Bacteria 1292
148 Ga0495681_0000991 3300047470 Bacteria 21719
149 Ga0495681_0108269 3300047470 Bacteria 1206
150 Ga0495686_0005948 3300047472 Bacteria 9495
151 Ga0495686_0020722 3300047472 Bacteria 4382
152 Ga0495686_0103783 3300047472 Bacteria 1712
153 Ga0495593_0004044 3300047673 Bacteria 8738
154 Ga0496110_0001520 3300048913 Bacteria 16833
155 Ga0496110_0002393 3300048913 Bacteria 14054
156 Ga0496111_0063381 3300048914 Bacteria 2681
157 Ga0496114_0102059 3300048917 Bacteria 2450
158 Ga0496116_0000116 3300048919 Bacteria 172374
159 Ga0496117_0077799 3300048920 Bacteria 2193
160 Ga0496118_0024688 3300048921 Bacteria 5179
161 Ga0496121_0000252 3300048924 Bacteria 113870
162 Ga0496121_0017971 3300048924 Bacteria 7169
163 Ga0496121_0054659 3300048924 Bacteria 3334
164 Ga0496122_0001468 3300048925 Bacteria 37962
165 Ga0496122_0007490 3300048925 Bacteria 12111
166 Ga0496122_0151313 3300048925 Bacteria 1432
167 Ga0496123_0000938 3300048926 Bacteria 45526
168 Ga0496124_0000003 3300048927 Bacteria 1300161
169 Ga0496125_0009138 3300048928 Bacteria 10252
170 Ga0496126_0030749 3300048929 Bacteria 5083
171 Ga0496126_0088203 3300048929 Bacteria 2733
172 Ga0496126_0170076 3300048929 Bacteria 1857
173 Ga0501295_042331 3300049518 Bacteria 949
174 Ga0501314_000629 3300049530 Bacteria 2250
175 Ga0501047_0013290 3300049581 Bacteria 7797
176 Ga0501069_0044775 3300049585 Bacteria 2450
177 Ga0501069_0243762 3300049585 Bacteria 1048
178 Ga0501070_0197653 3300049586 Bacteria 1651
179 Ga0501077_0018336 3300049593 Bacteria 4429
180 Ga0501209_087218 3300049656 Bacteria 905
181 Ga0501223_000049 3300049663 Bacteria 40988
182 Ga0501224_000007 3300049664 Bacteria 127654
183 Ga0501227_013370 3300049665 Bacteria 1807
184 Ga0501230_002238 3300049667 Bacteria 2446
185 Ga0501233_004215 3300049668 Bacteria 2623
186 Ga0501233_016687 3300049668 Bacteria 1526
187 Ga0501233_098603 3300049668 Unclassified 770
188 Ga0501235_008560 3300049669 Bacteria 2233
189 Ga0501225_0000055 3300049705 Bacteria 38821
190 Ga0501225_0031714 3300049705 Bacteria 1454
191 Ga0501234_001748 3300049707 Bacteria 3413
192 Ga0501079_0193704 3300049741 Unclassified 1587
193 Ga0501081_0069763 3300049743 Bacteria 2449
194 Ga0501081_0114267 3300049743 Bacteria 1918
195 Ga0501083_0030633 3300049744 Bacteria 3695
196 Ga0501083_0045468 3300049744 Bacteria 2970
197 Ga0501044_0007825 3300049823 Bacteria 11746
198 Ga0501044_0466853 3300049823 Bacteria 1167
199 Ga0501226_000025 3300049853 Bacteria 91197
200 nmdc:mga09592_101706_c1 3300050508 Bacteria 2462
201 nmdc:mga09592_10544_c1 3300050508 Bacteria 6281
202 nmdc:mga09592_4496_c1 3300050508 Bacteria 11282
203 Ga0500643_000719 3300053087 Bacteria 21806
204 Ga0500643_001906 3300053087 Bacteria 11339
205 Ga0500644_0000141 3300053088 Bacteria 44378
206 Ga0500566_0001959 3300053094 Bacteria 12129
207 Ga0500566_0037978 3300053094 Bacteria 2788
208 Ga0500566_0130361 3300053094 Bacteria 1346
209 Ga0500640_002393 3300053095 Bacteria 6192
210 Ga0500554_000106 3300053102 Bacteria 16101
211 Ga0500554_071247 3300053102 Bacteria 1132
212 Ga0500555_001237 3300053103 Bacteria 8216
213 Ga0500562_056002 3300053108 Bacteria 1057
214 Ga0500569_009413 3300053109 Bacteria 2270
215 Ga0500572_001048 3300053111 Bacteria 8235
216 Ga0500595_000138 3300053119 Bacteria 47841
217 Ga0500595_005711 3300053119 Bacteria 5387
218 Ga0500607_000058 3300053121 Bacteria 77958
219 Ga0500608_005292 3300053122 Bacteria 5110
220 Ga0500614_000401 3300053123 Bacteria 11285
221 Ga0500614_000571 3300053123 Bacteria 9521
222 Ga0500642_0045077 3300053130 Bacteria 1923
223 Ga0500652_100270 3300053131 Bacteria 1211
224 Ga0500655_029874 3300053133 Bacteria 1047
225 Ga0500559_0006035 3300053136 Bacteria 5496
226 Ga0500559_0008857 3300053136 Bacteria 4383
227 Ga0500559_0008903 3300053136 Bacteria 4370
228 Ga0500559_0257121 3300053136 Bacteria 822
229 Ga0500590_002225 3300053148 Bacteria 8483
230 Ga0500604_0045371 3300053151 Bacteria 1341
231 Ga0500616_0000147 3300053153 Bacteria 119392
232 Ga0500622_0086221 3300053156 Bacteria 1565
233 Ga0500636_0025591 3300053177 Bacteria 3489
234 Ga0500637_0103231 3300053178 Bacteria 1653
235 Ga0500645_001441 3300053730 Bacteria 12052
236 Ga0500596_000581 3300053735 Bacteria 6986
237 Ga0501084_0633757 3300054114 Bacteria 903
238 Ga0501082_0064907 3300060353 Bacteria 3144

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049668 Ga0501233_098603 Ga0501233_098603_137_733 196
2 3300048929 Ga0496126_0030749 Ga0496126_0030749_3316_3942 207
3 3300046471 Ga0495650_0131260 Ga0495650_0131260_48_734 208
4 3300047470 Ga0495681_0108269 Ga0495681_0108269_470_1156 208
5 3300046512 Ga0495610_0238935 Ga0495610_0238935_71_715 212
6 3300049585 Ga0501069_0243762 Ga0501069_0243762_378_1022 212
7 3300049593 Ga0501077_0018336 Ga0501077_0018336_2796_3476 212
8 3300049656 Ga0501209_087218 Ga0501209_087218_237_884 212
9 3300049741 Ga0501079_0193704 Ga0501079_0193704_812_1492 212
10 3300049743 Ga0501081_0114267 Ga0501081_0114267_857_1537 212
11 3300053136 Ga0500559_0257121 Ga0500559_0257121_20_676 212
12 3300009177 Ga0105248_10010303 Ga0105248_100103038 219
13 3300041512 Ga0451853_3066747 Ga0451853_3066747_16_684 221
14 3300049518 Ga0501295_042331 Ga0501295_042331_249_929 223
15 3300060353 Ga0501082_0064907 Ga0501082_0064907_2096_2782 226
16 iso_pu_bacteria 2512564014 2512644223 226
17 iso_pu_bacteria 2917699015 2917701047 226
18 iso_pu_bacteria 2929239360 2929245375 226
19 3300005535 Ga0070684_100717100 Ga0070684_1007171002 227
20 iso_pu_bacteria 2643221736 2644746205 227
21 iso_pu_bacteria 2738541275 2738712280 227
22 iso_pu_bacteria 2738541301 2738850705 227
23 iso_pu_bacteria 2738541304 2738866434 227
24 iso_pu_bacteria 2738543022 2739298952 227
25 iso_pu_bacteria 2738543033 2739360630 227
26 iso_pu_bacteria 2841760612 2841761882 227
27 iso_pu_bacteria 2844104063 2844104907 227
28 iso_pu_bacteria 2851182111 2851184868 227
29 iso_pu_bacteria 2851246043 2851247895 227
30 iso_pu_bacteria 2917699015 2917703586 227
31 iso_pu_bacteria 2928027323 2928029212 227
32 iso_pu_bacteria 2928100450 2928102795 227
33 iso_pu_bacteria 2928959182 2928961854 227
34 iso_pu_bacteria 2984555340 2984555346 227
35 iso_pu_bacteria 2984564862 2984566515 227
36 iso_pu_bacteria 2993356040 2993357554 227
37 iso_pu_bacteria 8057529695 8057529951 227
38 iso_pu_bacteria 2775507255 2778126556 228
39 3300005330 Ga0070690_100001086 Ga0070690_1000010863 230
40 3300005340 Ga0070689_100030359 Ga0070689_1000303596 230
41 3300005340 Ga0070689_100088909 Ga0070689_1000889092 230
42 3300005355 Ga0070671_100058986 Ga0070671_1000589864 230
43 3300005356 Ga0070674_100201153 Ga0070674_1002011532 230
44 3300005356 Ga0070674_100405640 Ga0070674_1004056402 230
45 3300005438 Ga0070701_10082781 Ga0070701_100827812 230
46 3300005441 Ga0070700_100184481 Ga0070700_1001844812 230
47 3300005455 Ga0070663_100008882 Ga0070663_1000088823 230
48 3300005467 Ga0070706_100163395 Ga0070706_1001633953 230
49 3300005471 Ga0070698_100001718 Ga0070698_10000171823 230
50 3300005518 Ga0070699_100314564 Ga0070699_1003145642 230
51 3300005530 Ga0070679_100694218 Ga0070679_1006942182 230
52 3300005536 Ga0070697_100389528 Ga0070697_1003895282 230
53 3300005539 Ga0068853_100061022 Ga0068853_1000610223 230
54 3300005548 Ga0070665_100001572 Ga0070665_10000157230 230
55 3300005577 Ga0068857_100069658 Ga0068857_1000696583 230
56 3300005578 Ga0068854_100057970 Ga0068854_1000579703 230
57 3300005614 Ga0068856_100523161 Ga0068856_1005231612 230
58 3300005616 Ga0068852_100016110 Ga0068852_1000161102 230
59 3300005618 Ga0068864_100551613 Ga0068864_1005516132 230
60 3300006353 Ga0075370_10073632 Ga0075370_100736322 230
61 3300006880 Ga0075429_100011552 Ga0075429_1000115524 230
62 3300006880 Ga0075429_100015777 Ga0075429_1000157774 230
63 3300006880 Ga0075429_100044469 Ga0075429_1000444693 230
64 3300007076 Ga0075435_100097266 Ga0075435_1000972662 230
65 3300009093 Ga0105240_10408201 Ga0105240_104082012 230
66 3300009098 Ga0105245_10000219 Ga0105245_1000021912 230
67 3300009174 Ga0105241_10006871 Ga0105241_100068719 230
68 3300009177 Ga0105248_10718076 Ga0105248_107180762 230
69 3300009545 Ga0105237_10862460 Ga0105237_108624602 230
70 3300009551 Ga0105238_10058929 Ga0105238_100589293 230
71 3300009553 Ga0105249_10007917 Ga0105249_100079176 230
72 3300009553 Ga0105249_10107953 Ga0105249_101079534 230
73 3300013296 Ga0157374_10183346 Ga0157374_101833463 230
74 3300013296 Ga0157374_10485208 Ga0157374_104852082 230
75 3300013296 Ga0157374_11025813 Ga0157374_110258132 230
76 3300013307 Ga0157372_10730169 Ga0157372_107301692 230
77 3300014968 Ga0157379_10830986 Ga0157379_108309861 230
78 3300014969 Ga0157376_10005149 Ga0157376_100051492 230
79 3300025908 Ga0207643_10121027 Ga0207643_101210272 230
80 3300025910 Ga0207684_10355397 Ga0207684_103553972 230
81 3300025911 Ga0207654_10001249 Ga0207654_100012491 230
82 3300025917 Ga0207660_10226523 Ga0207660_102265232 230
83 3300025922 Ga0207646_10446220 Ga0207646_104462202 230
84 3300025924 Ga0207694_10044470 Ga0207694_100444703 230
85 3300025927 Ga0207687_10000074 Ga0207687_1000007416 230
86 3300025936 Ga0207670_10006517 Ga0207670_100065173 230
87 3300025936 Ga0207670_10036295 Ga0207670_100362952 230
88 3300025936 Ga0207670_10123312 Ga0207670_101233123 230
89 3300025942 Ga0207689_10562026 Ga0207689_105620262 230
90 3300025961 Ga0207712_10027516 Ga0207712_100275163 230
91 3300025961 Ga0207712_10074652 Ga0207712_100746522 230
92 3300025981 Ga0207640_10018210 Ga0207640_100182103 230
93 3300025986 Ga0207658_10150256 Ga0207658_101502562 230
94 3300026041 Ga0207639_10009300 Ga0207639_100093003 230
95 3300026067 Ga0207678_10010220 Ga0207678_100102205 230
96 3300026075 Ga0207708_10205613 Ga0207708_102056132 230
97 3300026078 Ga0207702_10170967 Ga0207702_101709672 230
98 3300026088 Ga0207641_10017641 Ga0207641_100176412 230
99 3300026088 Ga0207641_10714954 Ga0207641_107149542 230
100 3300026089 Ga0207648_10349214 Ga0207648_103492142 230
101 3300026095 Ga0207676_10743887 Ga0207676_107438872 230
102 3300026116 Ga0207674_10114069 Ga0207674_101140693 230
103 3300026121 Ga0207683_10003617 Ga0207683_100036175 230
104 3300026142 Ga0207698_10016454 Ga0207698_100164543 230
105 3300027717 Ga0209998_10010000 Ga0209998_100100003 230
106 3300028379 Ga0268266_10002674 Ga0268266_100026744 230
107 3300028380 Ga0268265_10889408 Ga0268265_108894082 230
108 3300028381 Ga0268264_10396787 Ga0268264_103967872 230
109 3300028786 Ga0307517_10060772 Ga0307517_100607723 230
110 3300028794 Ga0307515_10007755 Ga0307515_1000775513 230
111 3300028800 Ga0265338_10191572 Ga0265338_101915723 230
112 3300031456 Ga0307513_10147129 Ga0307513_101471292 230
113 3300031507 Ga0307509_10059028 Ga0307509_100590283 230
114 3300031507 Ga0307509_10066129 Ga0307509_100661295 230
115 3300031507 Ga0307509_10122660 Ga0307509_101226602 230
116 3300031507 Ga0307509_10168736 Ga0307509_101687362 230
117 3300031616 Ga0307508_10035759 Ga0307508_100357597 230
118 3300031730 Ga0307516_10028363 Ga0307516_100283632 230
119 3300031730 Ga0307516_10102590 Ga0307516_101025902 230
120 3300031731 Ga0307405_10237367 Ga0307405_102373671 230
121 3300031901 Ga0307406_10002926 Ga0307406_100029263 230
122 3300033179 Ga0307507_10030485 Ga0307507_100304854 230
123 3300035090 Ga0373949_0000841 Ga0373949_0000841_2476_3189 230
124 3300035114 Ga0373939_0015980 Ga0373939_0015980_1153_1866 230
125 3300035241 Ga0373961_0000145 Ga0373961_0000145_7682_8395 230
126 3300037312 Ga0395899_0030471 Ga0395899_0030471_1498_2208 230
127 3300037418 Ga0395900_0010640 Ga0395900_0010640_1749_2459 230
128 3300037466 Ga0395898_0101103 Ga0395898_0101103_987_1697 230
129 3300037471 Ga0395905_0245957 Ga0395905_0245957_267_980 230
130 3300038443 Ga0395901_0061867 Ga0395901_0061867_1937_2647 230
131 3300038443 Ga0395901_0310639 Ga0395901_0310639_545_1255 230
132 3300038443 Ga0395901_0318793 Ga0395901_0318793_463_1173 230
133 3300039437 Ga0436365_0682862 Ga0436365_0682862_108_815 230
134 3300045976 Ga0466967_0213720 Ga0466967_0213720_978_1694 230
135 3300046453 Ga0495627_000235 Ga0495627_000235_33730_34437 230
136 3300046453 Ga0495627_000960 Ga0495627_000960_6488_7195 230
137 3300046459 Ga0495629_0293209 Ga0495629_0293209_261_1079 230
138 3300046460 Ga0495638_0000016 Ga0495638_0000016_209974_210684 230
139 3300046471 Ga0495650_0001769 Ga0495650_0001769_12519_13226 230
140 3300046471 Ga0495650_0054536 Ga0495650_0054536_364_1077 230
141 3300046501 Ga0495607_0011691 Ga0495607_0011691_3909_4616 230
142 3300046512 Ga0495610_0000391 Ga0495610_0000391_5327_6034 230
143 3300046513 Ga0495616_0000015 Ga0495616_0000015_46108_46818 230
144 3300046515 Ga0495620_0029639 Ga0495620_0029639_944_1651 230
145 3300046519 Ga0495632_0000053 Ga0495632_0000053_29499_30206 230
146 3300046519 Ga0495632_0004464 Ga0495632_0004464_2183_2890 230
147 3300046522 Ga0495643_0000298 Ga0495643_0000298_9309_10016 230
148 3300046524 Ga0495648_0000013 Ga0495648_0000013_185822_186532 230
149 3300046525 Ga0495663_0000012 Ga0495663_0000012_101779_102486 230
150 3300046558 Ga0495633_0013312 Ga0495633_0013312_2209_2916 230
151 3300046558 Ga0495633_0013388 Ga0495633_0013388_1424_2131 230
152 3300046691 Ga0495670_0227098 Ga0495670_0227098_47_754 230
153 3300046692 Ga0495671_0000018 Ga0495671_0000018_188357_189067 230
154 3300047469 Ga0495673_0000130 Ga0495673_0000130_34872_35582 230
155 3300047469 Ga0495673_0086073 Ga0495673_0086073_541_1248 230
156 3300047470 Ga0495681_0000991 Ga0495681_0000991_12547_13254 230
157 3300047472 Ga0495686_0020722 Ga0495686_0020722_928_1641 230
158 3300047472 Ga0495686_0103783 Ga0495686_0103783_514_1221 230
159 3300048917 Ga0496114_0102059 Ga0496114_0102059_1552_2289 230
160 3300048919 Ga0496116_0000116 Ga0496116_0000116_138732_139439 230
161 3300048925 Ga0496122_0001468 Ga0496122_0001468_12634_13341 230
162 3300048926 Ga0496123_0000938 Ga0496123_0000938_11884_12591 230
163 3300048928 Ga0496125_0009138 Ga0496125_0009138_3104_3811 230
164 3300049530 Ga0501314_000629 Ga0501314_000629_280_990 230
165 3300049581 Ga0501047_0013290 Ga0501047_0013290_3045_3755 230
166 3300049585 Ga0501069_0044775 Ga0501069_0044775_1068_1781 230
167 3300049586 Ga0501070_0197653 Ga0501070_0197653_439_1152 230
168 3300049663 Ga0501223_000049 Ga0501223_000049_3057_3767 230
169 3300049664 Ga0501224_000007 Ga0501224_000007_37426_38136 230
170 3300049665 Ga0501227_013370 Ga0501227_013370_200_916 230
171 3300049667 Ga0501230_002238 Ga0501230_002238_762_1478 230
172 3300049668 Ga0501233_004215 Ga0501233_004215_732_1442 230
173 3300049668 Ga0501233_016687 Ga0501233_016687_416_1132 230
174 3300049669 Ga0501235_008560 Ga0501235_008560_772_1482 230
175 3300049705 Ga0501225_0000055 Ga0501225_0000055_773_1483 230
176 3300049705 Ga0501225_0031714 Ga0501225_0031714_79_795 230
177 3300049707 Ga0501234_001748 Ga0501234_001748_1666_2376 230
178 3300049743 Ga0501081_0069763 Ga0501081_0069763_790_1503 230
179 3300049744 Ga0501083_0030633 Ga0501083_0030633_2707_3528 230
180 3300049744 Ga0501083_0045468 Ga0501083_0045468_263_1084 230
181 3300049823 Ga0501044_0007825 Ga0501044_0007825_7817_8527 230
182 3300049853 Ga0501226_000025 Ga0501226_000025_53056_53766 230
183 3300050508 nmdc:mga09592_101706_c1 nmdc:mga09592_101706_c1_1565_2275 230
184 3300050508 nmdc:mga09592_10544_c1 nmdc:mga09592_10544_c1_1520_2230 230
185 3300050508 nmdc:mga09592_4496_c1 nmdc:mga09592_4496_c1_4296_5018 230
186 3300053094 Ga0500566_0001959 Ga0500566_0001959_6541_7254 230
187 3300053094 Ga0500566_0130361 Ga0500566_0130361_340_1059 230
188 3300053095 Ga0500640_002393 Ga0500640_002393_1513_2226 230
189 3300053102 Ga0500554_000106 Ga0500554_000106_6503_7216 230
190 3300053111 Ga0500572_001048 Ga0500572_001048_2619_3332 230
191 3300053119 Ga0500595_000138 Ga0500595_000138_15744_16457 230
192 3300053123 Ga0500614_000401 Ga0500614_000401_4086_4799 230
193 3300053130 Ga0500642_0045077 Ga0500642_0045077_935_1648 230
194 3300053131 Ga0500652_100270 Ga0500652_100270_166_888 230
195 3300053136 Ga0500559_0008857 Ga0500559_0008857_2289_3002 230
196 3300053153 Ga0500616_0000147 Ga0500616_0000147_85470_86249 230
197 3300053156 Ga0500622_0086221 Ga0500622_0086221_666_1388 230
198 3300053730 Ga0500645_001441 Ga0500645_001441_4823_5536 230
199 3300054114 Ga0501084_0633757 Ga0501084_0633757_125_838 230
200 3300005289 Ga0065704_10070132 Ga0065704_10070132322 231
201 3300005366 Ga0070659_100004330 Ga0070659_10000433011 231
202 3300005578 Ga0068854_100195908 Ga0068854_1001959082 231
203 3300006358 Ga0068871_100170355 Ga0068871_1001703552 231
204 3300025321 Ga0207656_10169725 Ga0207656_101697252 231
205 3300025909 Ga0207705_10298570 Ga0207705_102985702 231
206 3300025913 Ga0207695_10005110 Ga0207695_100051102 231
207 3300025914 Ga0207671_10002440 Ga0207671_1000244018 231
208 3300025919 Ga0207657_10016757 Ga0207657_100167572 231
209 3300025932 Ga0207690_10000052 Ga0207690_1000005285 231
210 3300025933 Ga0207706_10014213 Ga0207706_100142138 231
211 3300026035 Ga0207703_10023300 Ga0207703_100233003 231
212 3300031238 Ga0265332_10001813 Ga0265332_100018137 231
213 3300031456 Ga0307513_10088520 Ga0307513_100885201 231
214 3300031728 Ga0316578_10093947 Ga0316578_100939472 231
215 3300031730 Ga0307516_10005782 Ga0307516_100057823 231
216 3300033180 Ga0307510_10002345 Ga0307510_1000234517 231
217 3300033180 Ga0307510_10016230 Ga0307510_100162306 231
218 3300036647 Ga0316582_0045569 Ga0316582_0045569_1755_2471 231
219 3300046524 Ga0495648_0000629 Ga0495648_0000629_30461_31174 231
220 3300046542 Ga0495597_0000849 Ga0495597_0000849_1386_2102 231
221 3300046557 Ga0495622_0005838 Ga0495622_0005838_3703_4419 231
222 3300046615 Ga0495656_0000775 Ga0495656_0000775_4496_5191 231
223 3300047318 Ga0495636_0009476 Ga0495636_0009476_1832_2527 231
224 3300047443 Ga0495687_129970 Ga0495687_129970_23_739 231
225 3300047472 Ga0495686_0005948 Ga0495686_0005948_370_1080 231
226 3300047673 Ga0495593_0004044 Ga0495593_0004044_2740_3456 231
227 3300048913 Ga0496110_0001520 Ga0496110_0001520_9840_10535 231
228 3300048913 Ga0496110_0002393 Ga0496110_0002393_10886_11584 231
229 3300048914 Ga0496111_0063381 Ga0496111_0063381_372_1070 231
230 3300048920 Ga0496117_0077799 Ga0496117_0077799_1024_1734 231
231 3300048921 Ga0496118_0024688 Ga0496118_0024688_1926_2636 231
232 3300048924 Ga0496121_0000252 Ga0496121_0000252_101906_102622 231
233 3300048924 Ga0496121_0017971 Ga0496121_0017971_6290_7000 231
234 3300048924 Ga0496121_0054659 Ga0496121_0054659_132_833 231
235 3300048925 Ga0496122_0007490 Ga0496122_0007490_5940_6650 231
236 3300048925 Ga0496122_0151313 Ga0496122_0151313_161_862 231
237 3300048927 Ga0496124_0000003 Ga0496124_0000003_1235867_1236565 231
238 3300048929 Ga0496126_0088203 Ga0496126_0088203_1605_2351 231
239 3300048929 Ga0496126_0170076 Ga0496126_0170076_203_916 231
240 3300049823 Ga0501044_0466853 Ga0501044_0466853_346_1056 231
241 3300053087 Ga0500643_000719 Ga0500643_000719_16268_16978 231
242 3300053087 Ga0500643_001906 Ga0500643_001906_25_741 231
243 3300053088 Ga0500644_0000141 Ga0500644_0000141_30423_31136 231
244 3300053094 Ga0500566_0037978 Ga0500566_0037978_811_1527 231
245 3300053102 Ga0500554_071247 Ga0500554_071247_401_1120 231
246 3300053103 Ga0500555_001237 Ga0500555_001237_4870_5586 231
247 3300053108 Ga0500562_056002 Ga0500562_056002_172_882 231
248 3300053109 Ga0500569_009413 Ga0500569_009413_416_1132 231
249 3300053119 Ga0500595_005711 Ga0500595_005711_999_1715 231
250 3300053121 Ga0500607_000058 Ga0500607_000058_70945_71655 231
251 3300053122 Ga0500608_005292 Ga0500608_005292_3848_4564 231
252 3300053123 Ga0500614_000571 Ga0500614_000571_6238_6954 231
253 3300053133 Ga0500655_029874 Ga0500655_029874_274_969 231
254 3300053136 Ga0500559_0006035 Ga0500559_0006035_1804_2514 231
255 3300053136 Ga0500559_0008903 Ga0500559_0008903_167_880 231
256 3300053148 Ga0500590_002225 Ga0500590_002225_5621_6337 231
257 3300053151 Ga0500604_0045371 Ga0500604_0045371_454_1164 231
258 3300053177 Ga0500636_0025591 Ga0500636_0025591_743_1459 231
259 3300053178 Ga0500637_0103231 Ga0500637_0103231_796_1512 231
260 3300053735 Ga0500596_000581 Ga0500596_000581_1987_2703 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01144

CoA_trans

Coenzyme A transferase

17

260

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dbn-assembly2.cif.gz_E crystal structure of atoda complex 0.9686 4 215
3dlx-assembly2.cif.gz_C crystal structure of human 3-oxoacid coa transferase 1 0.9631 4 226
4kgb-assembly1.cif.gz_A structure of succinyl-coa: 3-ketoacid coa transferase from drosophila melanogaster 0.9624 4 226
3oxo-assembly3.cif.gz_F succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.9618 4 226
3oxo-assembly4.cif.gz_H succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.9617 4 226
ID Description Score Start End Superfamily
5dbnA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.9664 2 215 3.40.1080.10
2nrbB01 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.9658 4 217 3.40.1080.10
5dbnA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.9533 2 215 3.40.1080.10
af_A4I5L9_2_259_3.40.1080.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.937 5 231 3.40.1080.10
af_Q4E2P8_5_264_3.40.1080.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.9338 3 231 3.40.1080.10
ID Description Score Start End GO Terms
AF-A0A3N7E1Y6-F1-model_v4 Succinyl-CoA--3-ketoacid-CoA transferase 0.9876 102 198 GO:0008410
AF-A0A442JCK8-F1-model_v4 CoA transferase subunit A 0.9866 20 216 GO:0008410
AF-A0A645ERY8-F1-model_v4 Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A (EC 2.8.3.5) 0.9852 63 218 GO:0008260
AF-A0A439VDF8-F1-model_v4 CoA transferase subunit A 0.9848 3 216 GO:0008410
AF-A0A2X3F3S6-F1-model_v4 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.9839 65 184 GO:0008260

Feature Viewer

pLDDT pTM Quality
91.51 0.88 High
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Predicted Structure (AlphaFold2)

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