F368167

General Info

Members Datasets Scaffolds Average Seq Length
258 194 516 281

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10011216|Ga0307515_100112168
Length 310
Sequence MSPEALSLWLSPPVLGLLGLCIGSFLNVVVHRLPRMMERDWWTDFAEQLSDGELFKRCFGHEPSKALQTTATELAKEVDGLGTYGLSKPRSACPACGHQIAWHENIPVFGWLRLRGRCSACKTKISPRYPLLELLTGALFAAAGWRFGAQPVALLWCALLAALVALAAIDWDTTMLPDSITLPLLWAGVAAASLGWTVPLGSAVWGAIVGYLSLWSVYKLYKAATGKEGMGYGDFKLLAALGAWLGWQAILPIILMSSVIGAVVGITMKFTSGLRQGGYVPFGPFLAGGGVVVVLAGTERVLGWIGQVGQ

Samples

Sample ID Description Type Environment
1 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
36 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
45 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
46 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
50 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
51 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
52 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
53 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
54 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
55 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
78 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
97 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
98 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
99 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
100 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
101 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
102 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
103 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
104 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
105 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
106 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
107 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
108 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
109 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
110 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
111 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
112 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
124 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
125 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
126 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
127 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
130 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
136 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
157 3300049678 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
165 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
166 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
169 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
170 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
173 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
174 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
175 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
176 2547132374 Acidovorax radicis N35 Isolate Unclassified
177 2643221570 Acidovorax sp. Root568 Isolate Unclassified
178 2643221596 Acidovorax sp. Root70 Isolate Unclassified
179 2643221609 Acidovorax sp. Root217 Isolate Unclassified
180 2643221611 Acidovorax sp. Root219 Isolate Unclassified
181 2643221652 Acidovorax sp. Root402 Isolate Unclassified
182 2643221717 Acidovorax sp. Root267 Isolate Unclassified
183 2721755523 Delftia sp. HK171 Isolate Unclassified
184 2738543012 Acidovorax sp. CF301 Isolate Unclassified
185 2816332133 Acidovorax radicis 2721A Isolate Unclassified
186 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
187 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
188 2842733646 Variovorax sp. R-72446 Isolate Unclassified
189 2842747753 Variovorax sp. R-72060 Isolate Unclassified
190 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
191 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
192 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
193 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
194 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.25
Metatranscriptomes 0
Isolates 7.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.91
Nodule 0.78
Rhizoplane 4.65
Rhizosphere 50.39
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307515_10011216 3300028794 Bacteria 17021
2 JGI25155J39150_1000022 3300002704 Bacteria 142950
3 JGI25156J39149_1000005 3300002705 Bacteria 263980
4 JGI25154J39366_1000017 3300002738 Bacteria 252448
5 JGI25157J39369_1000003 3300002741 Bacteria 274935
6 JGI25159J45721_1000990 3300002987 Bacteria 12274
7 JGI25159J45721_1001144 3300002987 Bacteria 11340
8 JGI25151J46595_10004588 3300003187 Bacteria 7277
9 JGI25151J46595_10005037 3300003187 Bacteria 6877
10 JGI25151J46595_10006929 3300003187 Bacteria 5622
11 JGI25160J50197_1000273 3300003354 Bacteria 38119
12 JGI25160J50197_1020880 3300003354 Bacteria 1962
13 JGI25161J50226_1000095 3300003374 Bacteria 72343
14 Ga0055526_1003397 3300003771 Bacteria 10133
15 Ga0055526_1006825 3300003771 Bacteria 6091
16 Ga0055537_1000483 3300003773 Bacteria 24708
17 Ga0055524_1000073 3300003775 Bacteria 123033
18 Ga0055536_1001517 3300003781 Bacteria 13926
19 Ga0055534_1000363 3300003784 Bacteria 28579
20 Ga0055534_1000994 3300003784 Bacteria 12461
21 Ga0055528_1000289 3300003790 Bacteria 42964
22 Ga0055530_10001136 3300003791 Bacteria 20712
23 Ga0055540_1000037 3300003792 Bacteria 162957
24 Ga0055531_10000112 3300003794 Bacteria 89016
25 Ga0055543_1000218 3300004625 Bacteria 46120
26 Ga0065165_1004909 3300005262 Bacteria 7899
27 Ga0065165_1006006 3300005262 Bacteria 6546
28 Ga0065165_1017615 3300005262 Bacteria 2623
29 Ga0070670_100037553 3300005331 Bacteria 4167
30 Ga0070660_100319795 3300005339 Bacteria 1275
31 Ga0070669_100182852 3300005353 Bacteria 1641
32 Ga0070675_100263121 3300005354 Bacteria 1512
33 Ga0070667_100016935 3300005367 Bacteria 6031
34 Ga0070714_100373004 3300005435 Bacteria 1344
35 Ga0070678_100035198 3300005456 Bacteria 3494
36 Ga0070707_100416079 3300005468 Bacteria 1305
37 Ga0070679_100031861 3300005530 Bacteria 5212
38 Ga0068853_100096468 3300005539 Bacteria 2609
39 Ga0075364_10001615 3300006051 Bacteria 12330
40 Ga0075362_10034404 3300006177 Bacteria 2209
41 Ga0075366_10001345 3300006195 Bacteria 12278
42 Ga0075366_10032030 3300006195 Bacteria 3095
43 Ga0075370_10004682 3300006353 Bacteria 6675
44 Ga0079104_1000055 3300006946 Bacteria 166522
45 Ga0105250_10005158 3300009092 Bacteria 5895
46 Ga0105240_10017122 3300009093 Bacteria 9784
47 Ga0105238_10037817 3300009551 Bacteria 4904
48 Ga0157326_1000855 3300012513 Bacteria 3510
49 Ga0157370_10200031 3300013104 Bacteria 1853
50 Ga0163163_10397545 3300014325 Bacteria 1436
51 Ga0182008_10003127 3300014497 Bacteria 10128
52 Ga0182008_10008708 3300014497 Bacteria 5519
53 Ga0182006_1074256 3300015261 Bacteria 1253
54 Ga0182007_10002485 3300015262 Bacteria 9137
55 Ga0182005_1009742 3300015265 Bacteria 2781
56 Ga0183362_10003 3300015683 Bacteria 977584
57 Ga0163161_10473179 3300017792 Bacteria 1016
58 Ga0163161_10541086 3300017792 Bacteria 953
59 Ga0213872_10005728 3300021361 Bacteria 6327
60 Ga0209435_100002 3300025206 Bacteria 794178
61 Ga0209436_108220 3300025208 Bacteria 2098
62 Ga0207425_1001420 3300025245 Bacteria 10049
63 Ga0207425_1001487 3300025245 Bacteria 9742
64 Ga0209646_1000001 3300025246 Bacteria 3092932
65 Ga0209026_1000001 3300025250 Bacteria 1228671
66 Ga0209759_1000001 3300025256 Bacteria 2799452
67 Ga0209565_1000128 3300025263 Bacteria 108959
68 Ga0209565_1000708 3300025263 Bacteria 20409
69 Ga0209673_1000008 3300025273 Bacteria 626013
70 Ga0209130_1000072 3300025284 Bacteria 175726
71 Ga0209130_1000315 3300025284 Bacteria 56958
72 Ga0209675_1000221 3300025291 Bacteria 59141
73 Ga0209676_1000023 3300025292 Bacteria 589732
74 Ga0209676_1004490 3300025292 Bacteria 7750
75 Ga0209025_1003614 3300025294 Bacteria 14402
76 Ga0209025_1008309 3300025294 Bacteria 7491
77 Ga0209564_1000435 3300025295 Bacteria 72434
78 Ga0209564_1000998 3300025295 Bacteria 35364
79 Ga0209564_1009909 3300025295 Bacteria 4462
80 Ga0209758_1002271 3300025297 Bacteria 19909
81 Ga0209050_1000022 3300025298 Bacteria 565239
82 Ga0209050_1004091 3300025298 Bacteria 10194
83 Ga0209256_1000001 3300025299 Bacteria 2166974
84 Ga0207426_1000319 3300025302 Bacteria 92696
85 Ga0207426_1002802 3300025302 Bacteria 10454
86 Ga0209051_1000013 3300025303 Bacteria 565239
87 Ga0209257_1000042 3300025304 Bacteria 537149
88 Ga0209257_1013217 3300025304 Bacteria 3704
89 Ga0207696_1002665 3300025711 Bacteria 8578
90 Ga0207688_10193392 3300025901 Bacteria 1218
91 Ga0207695_10098096 3300025913 Bacteria 2930
92 Ga0207694_10053585 3300025924 Bacteria 3128
93 Ga0207709_10000111 3300025935 Bacteria 127580
94 Ga0207639_10047459 3300026041 Bacteria 3246
95 Ga0207639_10240326 3300026041 Bacteria 1574
96 Ga0207641_10079679 3300026088 Bacteria 2840
97 Ga0207648_10479476 3300026089 Bacteria 1136
98 Ga0207683_10025014 3300026121 Bacteria 5148
99 Ga0209281_1000007 3300027111 Bacteria 938265
100 Ga0209970_1000052 3300027614 Bacteria 15551
101 Ga0209974_10003409 3300027876 Bacteria 5743
102 Ga0307515_10000084 3300028794 Bacteria 221434
103 Ga0307515_10004716 3300028794 Bacteria 27939
104 Ga0265331_10119536 3300031250 Bacteria 1205
105 Ga0265327_10022316 3300031251 Bacteria 3789
106 Ga0307513_10000117 3300031456 Bacteria 110951
107 Ga0307513_10002745 3300031456 Bacteria 24211
108 Ga0307513_10007534 3300031456 Bacteria 14084
109 Ga0307408_100000557 3300031548 Bacteria 32161
110 Ga0307408_100008274 3300031548 Bacteria 6865
111 Ga0307408_100058690 3300031548 Bacteria 2798
112 Ga0307514_10000319 3300031649 Bacteria 115327
113 Ga0265314_10004112 3300031711 Bacteria 13711
114 Ga0265314_10015650 3300031711 Bacteria 6013
115 Ga0307516_10006887 3300031730 Bacteria 13236
116 Ga0307516_10167041 3300031730 Bacteria 1944
117 Ga0307406_10004659 3300031901 Bacteria 7474
118 Ga0307406_10074274 3300031901 Bacteria 2238
119 Ga0307416_100783526 3300032002 Bacteria 1048
120 Ga0307411_10246971 3300032005 Bacteria 1401
121 Ga0395899_0015907 3300037312 Bacteria 5736
122 Ga0395900_0006372 3300037418 Bacteria 12301
123 Ga0395900_0059937 3300037418 Bacteria 3917
124 Ga0395900_0533610 3300037418 Bacteria 1120
125 Ga0395898_0002933 3300037466 Bacteria 19401
126 Ga0395898_0041859 3300037466 Bacteria 4522
127 Ga0395898_0111329 3300037466 Bacteria 2624
128 Ga0395905_0000088 3300037471 Bacteria 152506
129 Ga0395905_0002271 3300037471 Bacteria 21567
130 Ga0395905_0011982 3300037471 Bacteria 8361
131 Ga0395905_0041358 3300037471 Bacteria 4325
132 Ga0395905_0070961 3300037471 Bacteria 3265
133 Ga0395905_0077866 3300037471 Bacteria 3106
134 Ga0395905_0227472 3300037471 Bacteria 1744
135 Ga0395905_0375018 3300037471 Bacteria 1316
136 Ga0395901_0031376 3300038443 Bacteria 5479
137 Ga0395901_0156202 3300038443 Bacteria 2396
138 Ga0395901_0245695 3300038443 Bacteria 1865
139 Ga0436361_0268202 3300039447 Bacteria 49775
140 Ga0439436_0006903 3300041404 Bacteria 3488
141 Ga0439461_0005902 3300041410 Bacteria 2113
142 Ga0439466_0004576 3300041411 Bacteria 5314
143 Ga0439465_0004027 3300041413 Bacteria 4788
144 Ga0439465_0042561 3300041413 Bacteria 1472
145 Ga0451791_1778689 3300041451 Bacteria 1199
146 Ga0451795_1393326 3300041456 Bacteria 932
147 Ga0451800_1453377 3300041459 Bacteria 1410
148 Ga0439431_0000937 3300041997 Bacteria 6335
149 Ga0439433_0000594 3300041999 Bacteria 6892
150 Ga0439442_003175 3300042002 Bacteria 3252
151 Ga0439445_0001370 3300042004 Bacteria 5280
152 Ga0439445_0077692 3300042004 Bacteria 925
153 Ga0439449_0014551 3300042007 Bacteria 2957
154 Ga0439449_0070586 3300042007 Bacteria 1287
155 Ga0439452_007286 3300042010 Bacteria 3396
156 Ga0439462_0001708 3300042015 Bacteria 4960
157 Ga0450923_021786 3300042125 Bacteria 1251
158 Ga0439446_0018263 3300042156 Bacteria 1963
159 Ga0439434_0008768 3300042435 Bacteria 2971
160 Ga0451577_0000276 3300042876 Bacteria 99531
161 Ga0451577_0054146 3300042876 Bacteria 3582
162 Ga0466972_0032685 3300044658 Bacteria 2554
163 Ga0453683_0004322 3300044673 Bacteria 10116
164 Ga0466965_0121579 3300044683 Bacteria 1349
165 Ga0466966_0001826 3300044684 Bacteria 13814
166 Ga0453684_0000891 3300044712 Bacteria 99637
167 Ga0453684_0138636 3300044712 Bacteria 2908
168 Ga0466970_0050108 3300044765 Bacteria 2227
169 Ga0466957_0017735 3300044842 Bacteria 4175
170 Ga0466959_0008784 3300045049 Bacteria 7158
171 Ga0451576_0002533 3300045051 Bacteria 27062
172 Ga0451576_0083228 3300045051 Bacteria 3329
173 Ga0495639_0008624 3300046475 Bacteria 4373
174 Ga0495618_0381550 3300046514 Bacteria 865
175 Ga0495663_0020622 3300046525 Bacteria 1892
176 Ga0495642_0008956 3300046528 Bacteria 3831
177 Ga0495642_0018032 3300046528 Bacteria 2760
178 Ga0495654_0001848 3300046530 Bacteria 14113
179 Ga0495597_0001155 3300046542 Bacteria 19882
180 Ga0495633_0000563 3300046558 Bacteria 36212
181 Ga0495633_0110077 3300046558 Bacteria 1277
182 Ga0495656_0000090 3300046615 Bacteria 39387
183 Ga0495656_0037218 3300046615 Bacteria 2008
184 Ga0495658_0307560 3300046683 Bacteria 1003
185 Ga0495613_0206579 3300046689 Bacteria 1383
186 Ga0495624_0235464 3300046690 Bacteria 1109
187 Ga0495680_0185964 3300047322 Bacteria 1497
188 Ga0495685_035876 3300047447 Bacteria 1703
189 Ga0495593_0119360 3300047673 Bacteria 1343
190 Ga0496101_0001103 3300048904 Bacteria 16042
191 Ga0496104_0106842 3300048907 Bacteria 2682
192 Ga0496105_0012402 3300048908 Bacteria 6747
193 Ga0496106_0018085 3300048909 Bacteria 5211
194 Ga0496107_0087133 3300048910 Bacteria 2280
195 Ga0496109_0080534 3300048912 Bacteria 3000
196 Ga0496110_0085528 3300048913 Bacteria 2814
197 Ga0496112_0204126 3300048915 Bacteria 1935
198 Ga0496114_0223156 3300048917 Bacteria 1654
199 Ga0496116_0113131 3300048919 Bacteria 1589
200 Ga0496122_0006247 3300048925 Bacteria 13779
201 Ga0496122_0060438 3300048925 Bacteria 2790
202 Ga0496122_0062674 3300048925 Bacteria 2720
203 Ga0496123_0000274 3300048926 Bacteria 101783
204 Ga0496123_0020148 3300048926 Bacteria 5228
205 Ga0496124_0131319 3300048927 Bacteria 1989
206 Ga0496124_0265969 3300048927 Bacteria 1259
207 Ga0496124_0374412 3300048927 Bacteria 998
208 Ga0496125_0006034 3300048928 Bacteria 13252
209 Ga0496125_0264348 3300048928 Bacteria 1076
210 Ga0501031_0027336 3300049568 Bacteria 3720
211 Ga0501031_0063309 3300049568 Bacteria 2410
212 Ga0501036_0133519 3300049572 Bacteria 2095
213 Ga0501038_0058836 3300049574 Bacteria 3293
214 Ga0501043_0230294 3300049579 Bacteria 1431
215 Ga0501073_0300150 3300049589 Bacteria 1108
216 Ga0501223_000534 3300049663 Bacteria 9173
217 Ga0501248_004808 3300049678 Bacteria 1038
218 Ga0501035_0020638 3300049822 Bacteria 6052
219 Ga0501044_0071043 3300049823 Bacteria 3540
220 nmdc:mga03683_143975_c1 3300050489 Bacteria 1073
221 nmdc:mga03683_14981_c1 3300050489 Bacteria 2883
222 nmdc:mga00v17_13382_c1 3300050491 Bacteria 4554
223 nmdc:mga0k408_1875_c1 3300050493 Bacteria 11271
224 nmdc:mga0k408_8289_c1 3300050493 Bacteria 5575
225 nmdc:mga07m45_90293_c1 3300050496 Bacteria 1755
226 Ga0500644_0000720 3300053088 Bacteria 11694
227 Ga0500646_0071552 3300053090 Bacteria 1041
228 Ga0500651_0100316 3300053093 Bacteria 1775
229 Ga0500641_0067299 3300053096 Bacteria 1501
230 Ga0500593_003259 3300053117 Bacteria 6110
231 Ga0500594_0047743 3300053118 Bacteria 1195
232 Ga0500628_002616 3300053129 Bacteria 2967
233 Ga0500559_0083562 3300053136 Bacteria 1454
234 Ga0500573_0078863 3300053140 Bacteria 1873
235 Ga0500645_003758 3300053730 Bacteria 6050
236 Ga0500645_031864 3300053730 Bacteria 1583
237 Ga0500645_045402 3300053730 Bacteria 1291
238 Ga0500661_003454 3300055283 Bacteria 2964
239 2511244618 2511231002 Bacteria 5042903
240 2548499040 2547132374 Bacteria 5530232
241 2643867755 2643221570 Bacteria 5103772
242 2643991618 2643221596 Bacteria 5006805
243 2644062211 2643221609 Bacteria 6756331
244 2644071399 2643221611 Bacteria 6820941
245 2644293364 2643221652 Bacteria 5140275
246 2644648497 2643221717 Bacteria 5676132
247 2722881973 2721755523 Bacteria 6430384
248 2739245822 2738543012 Bacteria 7115078
249 2816470516 2816332133 Bacteria 7249298
250 2839141866 2839138175 Bacteria 6549354
251 2842718708 2842718218 Bacteria 4560148
252 2842736377 2842733646 Bacteria 5716726
253 2842748885 2842747753 Bacteria 5578255
254 2881103120 2881101125 Bacteria 4590519
255 2885196951 2885192300 Bacteria 5882526
256 2928120643 2928115317 Bacteria 6477646
257 2932424030 2932422444 Bacteria 4678430
258 2974320412 2974320154 Bacteria 4571377
259 Ga0307515_10011216
260 JGI25155J39150_1000022
261 JGI25156J39149_1000005
262 JGI25154J39366_1000017
263 JGI25157J39369_1000003
264 JGI25159J45721_1000990
265 JGI25159J45721_1001144
266 JGI25151J46595_10004588
267 JGI25151J46595_10005037
268 JGI25151J46595_10006929
269 JGI25160J50197_1000273
270 JGI25160J50197_1020880
271 JGI25161J50226_1000095
272 Ga0055526_1003397
273 Ga0055526_1006825
274 Ga0055537_1000483
275 Ga0055524_1000073
276 Ga0055536_1001517
277 Ga0055534_1000363
278 Ga0055534_1000994
279 Ga0055528_1000289
280 Ga0055530_10001136
281 Ga0055540_1000037
282 Ga0055531_10000112
283 Ga0055543_1000218
284 Ga0065165_1004909
285 Ga0065165_1006006
286 Ga0065165_1017615
287 Ga0070670_100037553
288 Ga0070660_100319795
289 Ga0070669_100182852
290 Ga0070675_100263121
291 Ga0070667_100016935
292 Ga0070714_100373004
293 Ga0070678_100035198
294 Ga0070707_100416079
295 Ga0070679_100031861
296 Ga0068853_100096468
297 Ga0075364_10001615
298 Ga0075362_10034404
299 Ga0075366_10001345
300 Ga0075366_10032030
301 Ga0075370_10004682
302 Ga0079104_1000055
303 Ga0105250_10005158
304 Ga0105240_10017122
305 Ga0105238_10037817
306 Ga0157326_1000855
307 Ga0157370_10200031
308 Ga0163163_10397545
309 Ga0182008_10003127
310 Ga0182008_10008708
311 Ga0182006_1074256
312 Ga0182007_10002485
313 Ga0182005_1009742
314 Ga0183362_10003
315 Ga0163161_10473179
316 Ga0163161_10541086
317 Ga0213872_10005728
318 Ga0209435_100002
319 Ga0209436_108220
320 Ga0207425_1001420
321 Ga0207425_1001487
322 Ga0209646_1000001
323 Ga0209026_1000001
324 Ga0209759_1000001
325 Ga0209565_1000128
326 Ga0209565_1000708
327 Ga0209673_1000008
328 Ga0209130_1000072
329 Ga0209130_1000315
330 Ga0209675_1000221
331 Ga0209676_1000023
332 Ga0209676_1004490
333 Ga0209025_1003614
334 Ga0209025_1008309
335 Ga0209564_1000435
336 Ga0209564_1000998
337 Ga0209564_1009909
338 Ga0209758_1002271
339 Ga0209050_1000022
340 Ga0209050_1004091
341 Ga0209256_1000001
342 Ga0207426_1000319
343 Ga0207426_1002802
344 Ga0209051_1000013
345 Ga0209257_1000042
346 Ga0209257_1013217
347 Ga0207696_1002665
348 Ga0207688_10193392
349 Ga0207695_10098096
350 Ga0207694_10053585
351 Ga0207709_10000111
352 Ga0207639_10047459
353 Ga0207639_10240326
354 Ga0207641_10079679
355 Ga0207648_10479476
356 Ga0207683_10025014
357 Ga0209281_1000007
358 Ga0209970_1000052
359 Ga0209974_10003409
360 Ga0307515_10000084
361 Ga0307515_10004716
362 Ga0265331_10119536
363 Ga0265327_10022316
364 Ga0307513_10000117
365 Ga0307513_10002745
366 Ga0307513_10007534
367 Ga0307408_100000557
368 Ga0307408_100008274
369 Ga0307408_100058690
370 Ga0307514_10000319
371 Ga0265314_10004112
372 Ga0265314_10015650
373 Ga0307516_10006887
374 Ga0307516_10167041
375 Ga0307406_10004659
376 Ga0307406_10074274
377 Ga0307416_100783526
378 Ga0307411_10246971
379 Ga0395899_0015907
380 Ga0395900_0006372
381 Ga0395900_0059937
382 Ga0395900_0533610
383 Ga0395898_0002933
384 Ga0395898_0041859
385 Ga0395898_0111329
386 Ga0395905_0000088
387 Ga0395905_0002271
388 Ga0395905_0011982
389 Ga0395905_0041358
390 Ga0395905_0070961
391 Ga0395905_0077866
392 Ga0395905_0227472
393 Ga0395905_0375018
394 Ga0395901_0031376
395 Ga0395901_0156202
396 Ga0395901_0245695
397 Ga0436361_0268202
398 Ga0439436_0006903
399 Ga0439461_0005902
400 Ga0439466_0004576
401 Ga0439465_0004027
402 Ga0439465_0042561
403 Ga0451791_1778689
404 Ga0451795_1393326
405 Ga0451800_1453377
406 Ga0439431_0000937
407 Ga0439433_0000594
408 Ga0439442_003175
409 Ga0439445_0001370
410 Ga0439445_0077692
411 Ga0439449_0014551
412 Ga0439449_0070586
413 Ga0439452_007286
414 Ga0439462_0001708
415 Ga0450923_021786
416 Ga0439446_0018263
417 Ga0439434_0008768
418 Ga0451577_0000276
419 Ga0451577_0054146
420 Ga0466972_0032685
421 Ga0453683_0004322
422 Ga0466965_0121579
423 Ga0466966_0001826
424 Ga0453684_0000891
425 Ga0453684_0138636
426 Ga0466970_0050108
427 Ga0466957_0017735
428 Ga0466959_0008784
429 Ga0451576_0002533
430 Ga0451576_0083228
431 Ga0495639_0008624
432 Ga0495618_0381550
433 Ga0495663_0020622
434 Ga0495642_0008956
435 Ga0495642_0018032
436 Ga0495654_0001848
437 Ga0495597_0001155
438 Ga0495633_0000563
439 Ga0495633_0110077
440 Ga0495656_0000090
441 Ga0495656_0037218
442 Ga0495658_0307560
443 Ga0495613_0206579
444 Ga0495624_0235464
445 Ga0495680_0185964
446 Ga0495685_035876
447 Ga0495593_0119360
448 Ga0496101_0001103
449 Ga0496104_0106842
450 Ga0496105_0012402
451 Ga0496106_0018085
452 Ga0496107_0087133
453 Ga0496109_0080534
454 Ga0496110_0085528
455 Ga0496112_0204126
456 Ga0496114_0223156
457 Ga0496116_0113131
458 Ga0496122_0006247
459 Ga0496122_0060438
460 Ga0496122_0062674
461 Ga0496123_0000274
462 Ga0496123_0020148
463 Ga0496124_0131319
464 Ga0496124_0265969
465 Ga0496124_0374412
466 Ga0496125_0006034
467 Ga0496125_0264348
468 Ga0501031_0027336
469 Ga0501031_0063309
470 Ga0501036_0133519
471 Ga0501038_0058836
472 Ga0501043_0230294
473 Ga0501073_0300150
474 Ga0501223_000534
475 Ga0501248_004808
476 Ga0501035_0020638
477 Ga0501044_0071043
478 nmdc:mga03683_143975_c1
479 nmdc:mga03683_14981_c1
480 nmdc:mga00v17_13382_c1
481 nmdc:mga0k408_1875_c1
482 nmdc:mga0k408_8289_c1
483 nmdc:mga07m45_90293_c1
484 Ga0500644_0000720
485 Ga0500646_0071552
486 Ga0500651_0100316
487 Ga0500641_0067299
488 Ga0500593_003259
489 Ga0500594_0047743
490 Ga0500628_002616
491 Ga0500559_0083562
492 Ga0500573_0078863
493 Ga0500645_003758
494 Ga0500645_031864
495 Ga0500645_045402
496 Ga0500661_003454
497 2511244618
498 2548499040
499 2643867755
500 2643991618
501 2644062211
502 2644071399
503 2644293364
504 2644648497
505 2722881973
506 2739245822
507 2816470516
508 2839141866
509 2842718708
510 2842736377
511 2842748885
512 2881103120
513 2885196951
514 2928120643
515 2932424030
516 2974320412

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06750

A24_N_bact

Bacterial Peptidase A24 N-terminal domain

17

147

0.98

PF01478

Peptidase_A24

Type IV leader peptidase family

157

266

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2npd-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.2876 9 277
4nh2-assembly1.cif.gz_A crystal structure of amtb from e. coli bound to phosphatidylglycerol 0.2858 9 283
4nh2-assembly1.cif.gz_A crystal structure of amtb from e. coli bound to phosphatidylglycerol 0.2794 9 283
2npd-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.2781 9 277
2npg-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.2703 9 277
ID Description Score Start End Superfamily
af_P25960_74_220_1.20.120.1220 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.9314 125 268 1.20.120.1220
af_Q46836_122_264_1.20.120.1220 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.9215 124 271 1.20.120.1220
af_Q46836_122_264_1.20.120.1220 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.9093 124 271 1.20.120.1220
af_P25960_74_220_1.20.120.1220 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.8894 125 268 1.20.120.1220
af_I6Y9M6_1_137_1.20.120.1220 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.826 128 270 1.20.120.1220
ID Description Score Start End GO Terms
AF-A0A661DUQ6-F1-model_v4 Prepilin peptidase 0.9708 7 189 GO:0004190
GO:0005886
GO:0006465
AF-A0A258Q137-F1-model_v4 Prepilin leader peptidase/N-methyltransferase (EC 2.1.1.-) (EC 3.4.23.43) 0.9691 6 246 GO:0004190
GO:0005886
GO:0006465
GO:0008168
GO:0032259
AF-A0A7R8ZXY4-F1-model_v4 Prepilin peptidase A24 N-terminal domain-containing protein 0.9691 7 160 GO:0004190
GO:0005886
GO:0006465
AF-A0A2T4CW43-F1-model_v4 deleted 0.9655 9 226
AF-A0A7U6G2A9-F1-model_v4 deleted 0.9637 7 169

Map