F367076

General Info

Members Datasets Scaffolds Average Seq Length
257 170 514 119

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_101217976|Ga0070674_1012179762
Length 139
Sequence MPRVKRGTVRRAKRKKLLARAKGYYANKSKLYRAAKESVDTALKYAFVGRRRKKRDFRTLWIVRINAAAREHGLTYSQLMAGLKAAGVTLDRKMLADVAVNEPASFASIAGQAKAAKPLATPRPVRAEKKTVKVREARA

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
161 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
162 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300059626 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 173R_CD_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.67
Metatranscriptomes 1.95
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.61
Nodule 0
Rhizoplane 0
Rhizosphere 90.66
Stem 0
Stem Tuber 0
Unclassified 8.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_101217976 3300005356 Bacteria 669
2 SwRhRL2b_contig_1762462 2162886007 Bacteria 256265
3 Ga0058860_11498992 3300004801 Bacteria 785
4 Ga0065704_10000188 3300005289 Bacteria 267216
5 Ga0065707_10000848 3300005295 Bacteria 17075
6 Ga0070690_101302132 3300005330 Bacteria 582
7 Ga0070677_10144128 3300005333 Unclassified 1102
8 Ga0068869_101120312 3300005334 Bacteria 689
9 Ga0068869_102157368 3300005334 Bacteria 501
10 Ga0070680_100335703 3300005336 Bacteria 1284
11 Ga0070680_100742838 3300005336 Bacteria 845
12 Ga0070692_10453490 3300005345 Bacteria 821
13 Ga0070668_100575096 3300005347 Bacteria 983
14 Ga0070668_100737355 3300005347 Bacteria 871
15 Ga0070669_100192304 3300005353 Bacteria 1601
16 Ga0070669_100468958 3300005353 Bacteria 1040
17 Ga0070669_101026837 3300005353 Bacteria 708
18 Ga0070675_100374071 3300005354 Bacteria 1267
19 Ga0070675_100631185 3300005354 Bacteria 973
20 Ga0070674_101395482 3300005356 Bacteria 627
21 Ga0070673_100012766 3300005364 Bacteria 5780
22 Ga0070667_100135619 3300005367 Bacteria 2152
23 Ga0070667_101914867 3300005367 Bacteria 558
24 Ga0070705_100613870 3300005440 Bacteria 843
25 Ga0070700_100005533 3300005441 Bacteria 6703
26 Ga0070694_100000647 3300005444 Bacteria 19232
27 Ga0070708_100701263 3300005445 Bacteria 953
28 Ga0070678_100717321 3300005456 Unclassified 902
29 Ga0070681_10253788 3300005458 Bacteria 1671
30 Ga0070681_11147242 3300005458 Bacteria 698
31 Ga0070685_10314813 3300005466 Bacteria 1059
32 Ga0070698_100366308 3300005471 Bacteria 1373
33 Ga0070698_100751855 3300005471 Bacteria 918
34 Ga0070672_100602499 3300005543 Unclassified 957
35 Ga0070695_100213626 3300005545 Bacteria 1386
36 Ga0070696_101128398 3300005546 Bacteria 660
37 Ga0070665_100580542 3300005548 Unclassified 1134
38 Ga0070704_100088641 3300005549 Bacteria 2299
39 Ga0070704_100107025 3300005549 Bacteria 2120
40 Ga0070704_100854504 3300005549 Bacteria 816
41 Ga0070664_101257869 3300005564 Bacteria 699
42 Ga0068859_100943974 3300005617 Bacteria 946
43 Ga0068859_101206914 3300005617 Bacteria 833
44 Ga0075365_10242456 3300006038 Bacteria 1266
45 Ga0075368_10018761 3300006042 Bacteria 2603
46 Ga0075363_100004992 3300006048 Bacteria 5870
47 Ga0075363_100156927 3300006048 Bacteria 1287
48 Ga0075364_10001891 3300006051 Bacteria 11624
49 Ga0070716_100088363 3300006173 Bacteria 1869
50 Ga0070712_100092327 3300006175 Bacteria 2220
51 Ga0075367_10008585 3300006178 Bacteria 5300
52 Ga0075369_10000184 3300006186 Bacteria 17989
53 Ga0075427_10000421 3300006194 Bacteria 4807
54 Ga0097621_100216814 3300006237 Bacteria 1666
55 Ga0097621_101442946 3300006237 Bacteria 652
56 Ga0075370_10009478 3300006353 Bacteria 5059
57 Ga0068871_100057991 3300006358 Bacteria 3152
58 Ga0068871_100341691 3300006358 Bacteria 1322
59 Ga0075428_100520377 3300006844 Bacteria 1272
60 Ga0075428_100757841 3300006844 Bacteria 1033
61 Ga0075428_101993845 3300006844 Bacteria 602
62 Ga0075430_100113422 3300006846 Bacteria 2259
63 Ga0075431_100016005 3300006847 Bacteria 7611
64 Ga0075431_100075390 3300006847 Bacteria 3481
65 Ga0075431_100826794 3300006847 Bacteria 898
66 Ga0075431_101033660 3300006847 Bacteria 788
67 Ga0075433_10011523 3300006852 Bacteria 7120
68 Ga0075433_10041585 3300006852 Bacteria 3983
69 Ga0075433_10158647 3300006852 Bacteria 2013
70 Ga0075434_100009073 3300006871 Bacteria 9263
71 Ga0075434_100366928 3300006871 Bacteria 1461
72 Ga0075434_100414415 3300006871 Bacteria 1368
73 Ga0075429_100015055 3300006880 Bacteria 6706
74 Ga0075429_100789088 3300006880 Bacteria 832
75 Ga0097620_100943899 3300006931 Bacteria 946
76 Ga0097620_101206697 3300006931 Bacteria 833
77 Ga0075435_100324665 3300007076 Bacteria 1317
78 Ga0099794_10028149 3300007265 Bacteria 2612
79 Ga0105240_10000096 3300009093 Bacteria 179543
80 Ga0105240_10032083 3300009093 Bacteria 6803
81 Ga0105240_12217194 3300009093 Unclassified 569
82 Ga0111539_10085669 3300009094 Bacteria 3703
83 Ga0111539_10095487 3300009094 Bacteria 3492
84 Ga0111539_11325531 3300009094 Bacteria 835
85 Ga0111539_11395996 3300009094 Bacteria 812
86 Ga0105247_10094623 3300009101 Bacteria 1901
87 Ga0114129_10070684 3300009147 Bacteria 4867
88 Ga0114129_11227965 3300009147 Unclassified 932
89 Ga0114129_11680639 3300009147 Bacteria 775
90 Ga0114129_11791422 3300009147 Bacteria 747
91 Ga0114129_12289509 3300009147 Unclassified 649
92 Ga0114129_12486539 3300009147 Bacteria 619
93 Ga0105242_10232109 3300009176 Bacteria 1654
94 Ga0105242_10550042 3300009176 Bacteria 1106
95 Ga0105248_10752616 3300009177 Bacteria 1099
96 Ga0105248_11573996 3300009177 Bacteria 744
97 Ga0105248_12865144 3300009177 Bacteria 550
98 Ga0105237_10029167 3300009545 Bacteria 5612
99 Ga0105249_10520783 3300009553 Bacteria 1236
100 Ga0157378_10220894 3300013297 Bacteria 1801
101 Ga0157378_10977084 3300013297 Bacteria 880
102 Ga0157372_11553924 3300013307 Unclassified 762
103 Ga0157375_10262000 3300013308 Bacteria 1890
104 Ga0157375_10341220 3300013308 Bacteria 1663
105 Ga0157375_11995616 3300013308 Bacteria 690
106 Ga0157380_10097987 3300014326 Bacteria 2435
107 Ga0157380_11199849 3300014326 Bacteria 802
108 Ga0157379_10000111 3300014968 Bacteria 56459
109 Ga0157376_10000972 3300014969 Bacteria 18685
110 Ga0157376_10528817 3300014969 Bacteria 1164
111 Ga0157376_12659965 3300014969 Bacteria 540
112 Ga0182005_1133201 3300015265 Bacteria 714
113 Ga0213876_10037079 3300021384 Bacteria 2572
114 Ga0207682_10127328 3300025893 Unclassified 1134
115 Ga0207682_10508683 3300025893 Bacteria 570
116 Ga0207699_10811807 3300025906 Bacteria 688
117 Ga0207645_10359174 3300025907 Unclassified 976
118 Ga0207707_10222068 3300025912 Bacteria 1645
119 Ga0207695_11341917 3300025913 Unclassified 595
120 Ga0207693_10091543 3300025915 Bacteria 2384
121 Ga0207660_11369330 3300025917 Bacteria 574
122 Ga0207681_10182198 3300025923 Bacteria 1601
123 Ga0207650_10988396 3300025925 Unclassified 716
124 Ga0207659_10228282 3300025926 Bacteria 1500
125 Ga0207687_10302238 3300025927 Bacteria 1289
126 Ga0207664_10172675 3300025929 Bacteria 1851
127 Ga0207644_10387613 3300025931 Bacteria 1140
128 Ga0207686_10196879 3300025934 Bacteria 1440
129 Ga0207711_11934484 3300025941 Bacteria 533
130 Ga0207689_11575902 3300025942 Bacteria 547
131 Ga0207651_10045434 3300025960 Bacteria 2946
132 Ga0207712_12016890 3300025961 Bacteria 516
133 Ga0207658_10173384 3300025986 Bacteria 1779
134 Ga0207658_10970857 3300025986 Bacteria 775
135 Ga0207703_11961247 3300026035 Bacteria 562
136 Ga0207708_10133843 3300026075 Bacteria 1940
137 Ga0207708_11506508 3300026075 Bacteria 591
138 Ga0207641_10207297 3300026088 Bacteria 1811
139 Ga0207641_11807600 3300026088 Bacteria 613
140 Ga0207648_10704808 3300026089 Bacteria 936
141 Ga0207675_100434949 3300026118 Bacteria 1298
142 Ga0209981_1053397 3300027378 Bacteria 614
143 Ga0209813_10003453 3300027866 Bacteria 3700
144 Ga0207428_10400659 3300027907 Bacteria 1005
145 Ga0268265_10106516 3300028380 Bacteria 2277
146 Ga0268264_10771387 3300028381 Bacteria 959
147 Ga0265336_10097767 3300028666 Bacteria 875
148 Ga0265338_10257188 3300028800 Bacteria 1285
149 Ga0316578_10553150 3300031728 Bacteria 676
150 Ga0307409_101275986 3300031995 Bacteria 759
151 Ga0307416_100785575 3300032002 Bacteria 1047
152 Ga0307416_100813519 3300032002 Bacteria 1031
153 Ga0307411_10939322 3300032005 Unclassified 771
154 Ga0316586_1060309 3300033527 Bacteria 689
155 Ga0316588_1213558 3300033528 Unclassified 507
156 Ga0373958_0214545 3300034819 Bacteria 509
157 Ga0373931_0900185 3300035691 Bacteria 595
158 Ga0373935_0053347 3300035692 Bacteria 2572
159 Ga0373927_0350074 3300035695 Bacteria 973
160 Ga0373947_0009585 3300035725 Bacteria 5558
161 Ga0373947_0850196 3300035725 Bacteria 623
162 Ga0373937_1124633 3300036401 Bacteria 734
163 Ga0373925_0051440 3300037068 Bacteria 3075
164 Ga0436364_0698565 3300037853 Unclassified 1694
165 Ga0436364_1093553 3300037853 Bacteria 4031
166 Ga0436365_0412618 3300039437 Bacteria 2424
167 Ga0436365_1439892 3300039437 Bacteria 2573
168 Ga0451577_0007612 3300042876 Bacteria 10623
169 Ga0451577_0010429 3300042876 Bacteria 8886
170 Ga0451577_0306096 3300042876 Bacteria 1440
171 Ga0451577_0397456 3300042876 Unclassified 1251
172 Ga0451577_1678670 3300042876 Bacteria 559
173 Ga0466969_0014883 3300044656 Bacteria 4083
174 Ga0466963_0005404 3300044694 Bacteria 7481
175 Ga0453684_0732227 3300044712 Bacteria 1072
176 Ga0453684_0938751 3300044712 Bacteria 924
177 Ga0466968_0174458 3300044735 Bacteria 997
178 Ga0466959_0124839 3300045049 Bacteria 1827
179 Ga0451576_0529025 3300045051 Bacteria 1239
180 Ga0451576_1587694 3300045051 Bacteria 679
181 Ga0451576_1963135 3300045051 Bacteria 603
182 Ga0466958_0007332 3300045836 Bacteria 6058
183 Ga0466967_1880570 3300045976 Bacteria 595
184 Ga0495580_0001954 3300046472 Bacteria 18094
185 Ga0495580_0143848 3300046472 Bacteria 1653
186 Ga0495586_0011238 3300046535 Bacteria 4760
187 Ga0495598_0220202 3300046537 Bacteria 693
188 Ga0496126_0063141 3300048929 Bacteria 3321
189 Ga0501034_0006500 3300049571 Bacteria 12575
190 Ga0501034_0041901 3300049571 Bacteria 4633
191 Ga0501034_0197456 3300049571 Bacteria 1971
192 Ga0501034_0404497 3300049571 Bacteria 1287
193 Ga0501036_0545952 3300049572 Bacteria 963
194 Ga0501036_1041074 3300049572 Bacteria 669
195 Ga0501037_0045844 3300049573 Bacteria 3208
196 Ga0501038_0436414 3300049574 Bacteria 1009
197 Ga0501039_0153160 3300049575 Bacteria 1811
198 Ga0501040_1242065 3300049576 Bacteria 541
199 Ga0501043_0285566 3300049579 Bacteria 1264
200 Ga0501046_0997639 3300049580 Bacteria 581
201 Ga0501048_0433915 3300049582 Bacteria 940
202 Ga0501048_0499476 3300049582 Unclassified 872
203 Ga0501068_0004409 3300049584 Bacteria 7655
204 Ga0501069_0294801 3300049585 Bacteria 950
205 Ga0501070_0010845 3300049586 Bacteria 7698
206 Ga0501070_0223640 3300049586 Bacteria 1543
207 Ga0501071_0000061 3300049587 Bacteria 37719
208 Ga0501071_0037900 3300049587 Bacteria 3444
209 Ga0501072_0017462 3300049588 Bacteria 5513
210 Ga0501073_0026008 3300049589 Bacteria 4194
211 Ga0501073_0354464 3300049589 Bacteria 1013
212 Ga0501074_0077391 3300049590 Bacteria 2387
213 Ga0501074_0170447 3300049590 Bacteria 1554
214 Ga0501074_0405475 3300049590 Bacteria 967
215 Ga0501076_0058164 3300049592 Bacteria 3072
216 Ga0501077_0397843 3300049593 Bacteria 880
217 Ga0501079_0535348 3300049741 Unclassified 921
218 Ga0501080_0003929 3300049742 Bacteria 13161
219 Ga0501080_0452346 3300049742 Bacteria 1151
220 Ga0501081_1137541 3300049743 Bacteria 591
221 Ga0501083_0063774 3300049744 Bacteria 2457
222 Ga0501083_0630318 3300049744 Bacteria 697
223 Ga0501044_0391374 3300049823 Bacteria 1304
224 nmdc:mga03n38_25866_c1 3300050490 Bacteria 2417
225 nmdc:mga00v17_112_c1 3300050491 Bacteria 48527
226 nmdc:mga00v17_11468_c1 3300050491 Bacteria 4871
227 nmdc:mga0yw44_110_c1 3300050492 Bacteria 28754
228 nmdc:mga06z11_109320_c1 3300050494 Bacteria 1529
229 nmdc:mga04h51_4909_c1 3300050495 Bacteria 3368
230 nmdc:mga07m45_647_c2 3300050496 Bacteria 5366
231 nmdc:mga05p37_125934_c1 3300050507 Bacteria 3146
232 nmdc:mga05p37_1299075_c1 3300050507 Bacteria 742
233 nmdc:mga05p37_1575555_c1 3300050507 Unclassified 649
234 nmdc:mga09592_111413_c1 3300050508 Bacteria 2348
235 nmdc:mga09592_1241721_c1 3300050508 Bacteria 614
236 nmdc:mga09592_421757_c1 3300050508 Bacteria 1152
237 nmdc:mga06r32_101058_c1 3300050510 Unclassified 2830
238 nmdc:mga08y16_1099102_c1 3300050511 Bacteria 770
239 nmdc:mga08y16_128305_c1 3300050511 Bacteria 2638
240 nmdc:mga08y16_194513_c1 3300050511 Bacteria 2103
241 nmdc:mga0n895_131313_c1 3300050512 Bacteria 2530
242 nmdc:mga0n895_1393889_c1 3300050512 Bacteria 670
243 nmdc:mga0n895_571343_c1 3300050512 Bacteria 1135
244 nmdc:mga0rr50_160301_c1 3300050513 Bacteria 1825
245 nmdc:mga08x19_411426_c1 3300050514 Bacteria 949
246 nmdc:mga0a205_189166_c1 3300050515 Bacteria 1951
247 nmdc:mga0a205_26_c2 3300050515 Bacteria 68852
248 nmdc:mga0a205_95493_c1 3300050515 Bacteria 2871
249 nmdc:mga0a205_9840_c1 3300050515 Bacteria 8772
250 nmdc:mga0sz30_24_c4 3300050516 Bacteria 37630
251 Ga0501084_0257374 3300054114 Bacteria 1473
252 Ga0501084_1584427 3300054114 Unclassified 548
253 Ga0587077_175782 3300059493 Bacteria 577
254 Ga0587115_054673 3300059626 Bacteria 656
255 Ga0501082_1200934 3300060353 Bacteria 663
256 Ga0466962_0049484 3300061719 Bacteria 2009
257 2844854900 2844852863 Bacteria 3849151
258 Ga0070674_101217976
259 SwRhRL2b_contig_1762462
260 Ga0058860_11498992
261 Ga0065704_10000188
262 Ga0065707_10000848
263 Ga0070690_101302132
264 Ga0070677_10144128
265 Ga0068869_101120312
266 Ga0068869_102157368
267 Ga0070680_100335703
268 Ga0070680_100742838
269 Ga0070692_10453490
270 Ga0070668_100575096
271 Ga0070668_100737355
272 Ga0070669_100192304
273 Ga0070669_100468958
274 Ga0070669_101026837
275 Ga0070675_100374071
276 Ga0070675_100631185
277 Ga0070674_101395482
278 Ga0070673_100012766
279 Ga0070667_100135619
280 Ga0070667_101914867
281 Ga0070705_100613870
282 Ga0070700_100005533
283 Ga0070694_100000647
284 Ga0070708_100701263
285 Ga0070678_100717321
286 Ga0070681_10253788
287 Ga0070681_11147242
288 Ga0070685_10314813
289 Ga0070698_100366308
290 Ga0070698_100751855
291 Ga0070672_100602499
292 Ga0070695_100213626
293 Ga0070696_101128398
294 Ga0070665_100580542
295 Ga0070704_100088641
296 Ga0070704_100107025
297 Ga0070704_100854504
298 Ga0070664_101257869
299 Ga0068859_100943974
300 Ga0068859_101206914
301 Ga0075365_10242456
302 Ga0075368_10018761
303 Ga0075363_100004992
304 Ga0075363_100156927
305 Ga0075364_10001891
306 Ga0070716_100088363
307 Ga0070712_100092327
308 Ga0075367_10008585
309 Ga0075369_10000184
310 Ga0075427_10000421
311 Ga0097621_100216814
312 Ga0097621_101442946
313 Ga0075370_10009478
314 Ga0068871_100057991
315 Ga0068871_100341691
316 Ga0075428_100520377
317 Ga0075428_100757841
318 Ga0075428_101993845
319 Ga0075430_100113422
320 Ga0075431_100016005
321 Ga0075431_100075390
322 Ga0075431_100826794
323 Ga0075431_101033660
324 Ga0075433_10011523
325 Ga0075433_10041585
326 Ga0075433_10158647
327 Ga0075434_100009073
328 Ga0075434_100366928
329 Ga0075434_100414415
330 Ga0075429_100015055
331 Ga0075429_100789088
332 Ga0097620_100943899
333 Ga0097620_101206697
334 Ga0075435_100324665
335 Ga0099794_10028149
336 Ga0105240_10000096
337 Ga0105240_10032083
338 Ga0105240_12217194
339 Ga0111539_10085669
340 Ga0111539_10095487
341 Ga0111539_11325531
342 Ga0111539_11395996
343 Ga0105247_10094623
344 Ga0114129_10070684
345 Ga0114129_11227965
346 Ga0114129_11680639
347 Ga0114129_11791422
348 Ga0114129_12289509
349 Ga0114129_12486539
350 Ga0105242_10232109
351 Ga0105242_10550042
352 Ga0105248_10752616
353 Ga0105248_11573996
354 Ga0105248_12865144
355 Ga0105237_10029167
356 Ga0105249_10520783
357 Ga0157378_10220894
358 Ga0157378_10977084
359 Ga0157372_11553924
360 Ga0157375_10262000
361 Ga0157375_10341220
362 Ga0157375_11995616
363 Ga0157380_10097987
364 Ga0157380_11199849
365 Ga0157379_10000111
366 Ga0157376_10000972
367 Ga0157376_10528817
368 Ga0157376_12659965
369 Ga0182005_1133201
370 Ga0213876_10037079
371 Ga0207682_10127328
372 Ga0207682_10508683
373 Ga0207699_10811807
374 Ga0207645_10359174
375 Ga0207707_10222068
376 Ga0207695_11341917
377 Ga0207693_10091543
378 Ga0207660_11369330
379 Ga0207681_10182198
380 Ga0207650_10988396
381 Ga0207659_10228282
382 Ga0207687_10302238
383 Ga0207664_10172675
384 Ga0207644_10387613
385 Ga0207686_10196879
386 Ga0207711_11934484
387 Ga0207689_11575902
388 Ga0207651_10045434
389 Ga0207712_12016890
390 Ga0207658_10173384
391 Ga0207658_10970857
392 Ga0207703_11961247
393 Ga0207708_10133843
394 Ga0207708_11506508
395 Ga0207641_10207297
396 Ga0207641_11807600
397 Ga0207648_10704808
398 Ga0207675_100434949
399 Ga0209981_1053397
400 Ga0209813_10003453
401 Ga0207428_10400659
402 Ga0268265_10106516
403 Ga0268264_10771387
404 Ga0265336_10097767
405 Ga0265338_10257188
406 Ga0316578_10553150
407 Ga0307409_101275986
408 Ga0307416_100785575
409 Ga0307416_100813519
410 Ga0307411_10939322
411 Ga0316586_1060309
412 Ga0316588_1213558
413 Ga0373958_0214545
414 Ga0373931_0900185
415 Ga0373935_0053347
416 Ga0373927_0350074
417 Ga0373947_0009585
418 Ga0373947_0850196
419 Ga0373937_1124633
420 Ga0373925_0051440
421 Ga0436364_0698565
422 Ga0436364_1093553
423 Ga0436365_0412618
424 Ga0436365_1439892
425 Ga0451577_0007612
426 Ga0451577_0010429
427 Ga0451577_0306096
428 Ga0451577_0397456
429 Ga0451577_1678670
430 Ga0466969_0014883
431 Ga0466963_0005404
432 Ga0453684_0732227
433 Ga0453684_0938751
434 Ga0466968_0174458
435 Ga0466959_0124839
436 Ga0451576_0529025
437 Ga0451576_1587694
438 Ga0451576_1963135
439 Ga0466958_0007332
440 Ga0466967_1880570
441 Ga0495580_0001954
442 Ga0495580_0143848
443 Ga0495586_0011238
444 Ga0495598_0220202
445 Ga0496126_0063141
446 Ga0501034_0006500
447 Ga0501034_0041901
448 Ga0501034_0197456
449 Ga0501034_0404497
450 Ga0501036_0545952
451 Ga0501036_1041074
452 Ga0501037_0045844
453 Ga0501038_0436414
454 Ga0501039_0153160
455 Ga0501040_1242065
456 Ga0501043_0285566
457 Ga0501046_0997639
458 Ga0501048_0433915
459 Ga0501048_0499476
460 Ga0501068_0004409
461 Ga0501069_0294801
462 Ga0501070_0010845
463 Ga0501070_0223640
464 Ga0501071_0000061
465 Ga0501071_0037900
466 Ga0501072_0017462
467 Ga0501073_0026008
468 Ga0501073_0354464
469 Ga0501074_0077391
470 Ga0501074_0170447
471 Ga0501074_0405475
472 Ga0501076_0058164
473 Ga0501077_0397843
474 Ga0501079_0535348
475 Ga0501080_0003929
476 Ga0501080_0452346
477 Ga0501081_1137541
478 Ga0501083_0063774
479 Ga0501083_0630318
480 Ga0501044_0391374
481 nmdc:mga03n38_25866_c1
482 nmdc:mga00v17_112_c1
483 nmdc:mga00v17_11468_c1
484 nmdc:mga0yw44_110_c1
485 nmdc:mga06z11_109320_c1
486 nmdc:mga04h51_4909_c1
487 nmdc:mga07m45_647_c2
488 nmdc:mga05p37_125934_c1
489 nmdc:mga05p37_1299075_c1
490 nmdc:mga05p37_1575555_c1
491 nmdc:mga09592_111413_c1
492 nmdc:mga09592_1241721_c1
493 nmdc:mga09592_421757_c1
494 nmdc:mga06r32_101058_c1
495 nmdc:mga08y16_1099102_c1
496 nmdc:mga08y16_128305_c1
497 nmdc:mga08y16_194513_c1
498 nmdc:mga0n895_131313_c1
499 nmdc:mga0n895_1393889_c1
500 nmdc:mga0n895_571343_c1
501 nmdc:mga0rr50_160301_c1
502 nmdc:mga08x19_411426_c1
503 nmdc:mga0a205_189166_c1
504 nmdc:mga0a205_26_c2
505 nmdc:mga0a205_95493_c1
506 nmdc:mga0a205_9840_c1
507 nmdc:mga0sz30_24_c4
508 Ga0501084_0257374
509 Ga0501084_1584427
510 Ga0587077_175782
511 Ga0587115_054673
512 Ga0501082_1200934
513 Ga0466962_0049484
514 2844854900

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00453

Ribosomal_L20

Ribosomal protein L20

3

109

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gyz-assembly1.cif.gz_A bacterial ribosomal protein l20 from aquifex aeolicus 0.8617 61 114
7pkt-assembly1.cif.gz_o large subunit of the chlamydomonas reinhardtii mitoribosome 0.8529 14 113
6xyw-assembly1.cif.gz_Aq structure of the plant mitochondrial ribosome 0.8465 13 113
4v48-assembly1.cif.gz_AO real space refined coordinates of the 30s and 50s subunits fitted into the low resolution cryo-em map of the initiation-like state of e. coli 70s ribosome 0.8459 51 113
8apo-assembly1.cif.gz_Ao structure of the mitochondrial ribosome from polytomella magna with trnas bound to the a and p sites 0.8426 14 114
ID Description Score Start End Superfamily
2ghjD02 Mainly Alpha;Orthogonal Bundle;c-terminal domain of poly(a) binding protein;Ribosomal protein L20, C-terminal domain 0.9398 53 113 1.10.1900.20
2ghjB02 Mainly Alpha;Orthogonal Bundle;c-terminal domain of poly(a) binding protein;Ribosomal protein L20, C-terminal domain 0.918 58 113 1.10.1900.20
1gyzA00 Mainly Alpha;Orthogonal Bundle;c-terminal domain of poly(a) binding protein;Ribosomal protein L20, C-terminal domain 0.8617 61 114 1.10.1900.20
2ghjD02 Mainly Alpha;Orthogonal Bundle;c-terminal domain of poly(a) binding protein;Ribosomal protein L20, C-terminal domain 0.8236 53 113 1.10.1900.20
1gyzA00 Mainly Alpha;Orthogonal Bundle;c-terminal domain of poly(a) binding protein;Ribosomal protein L20, C-terminal domain 0.7753 61 114 1.10.1900.20
ID Description Score Start End GO Terms
AF-A0A3D5Q9G8-F1-model_v4 Large ribosomal subunit protein bL20 (50S ribosomal protein L20) 0.9831 54 113 GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A0E0N241-F1-model_v4 Large ribosomal subunit protein bL20c 0.9777 58 113 GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A2N8FNS0-F1-model_v4 deleted 0.9768 55 113
AF-A0A2D8YKH1-F1-model_v4 deleted 0.9766 58 113
AF-A0A1D6ND47-F1-model_v4 Large ribosomal subunit protein bL20c 0.9757 58 113 GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904

Map