F364239

General Info

Members Datasets Scaffolds Average Seq Length
253 201 161 367

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0275602|Ga0395898_0275602_192_1412
Length 406
Sequence VTDWRAPQIAASYRALSIPTSNGFRIVQSTETERRRMTRVLITGGAGFIGSHAAATLLDAGYEVRLFDNLAPQVHGPHRQPPSYLPRDVELIIGDITDAPALDRALRGTDMVLHLASSVGVGQSMYDIEPYVRTNELGTAVLLQAIARRAVGRLVVASSMSVYGEGACRSCDGAIMAPNERSIDQLRRDEWELRDSRGRLLEPVPTPETKQPALSSIYALNKYAQERMCLIVGNAYRIPTVALRLFNVYGPHQALSNPYTGVLAIFAARLLNRRPPMVFEDGLQRRDFVHVHDVARACLLALETERTGDVFNVGSGESRTIVSIARDLARTMGCPELAPTITGQYRAGDIRHCFADLEKSRSLLGFNPQVAFEDGLEELARYVVDQIAEDHAEAARHELLQRGLVA

Samples

Sample ID Description Type Environment
1 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
2 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
3 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
4 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
5 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
6 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
7 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
8 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
9 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
10 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
11 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
12 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
13 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
14 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
15 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
16 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
17 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
18 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
19 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
20 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
21 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
22 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
23 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
24 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
25 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
26 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
27 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
28 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
29 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
30 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
31 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
32 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
33 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
34 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
35 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
36 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
37 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
38 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
39 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
40 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
41 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
42 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
43 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
44 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
45 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
46 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
47 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
48 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
49 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
50 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
51 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
52 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
53 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
54 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
55 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
56 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
57 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
58 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
59 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
60 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
61 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
62 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
63 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
64 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
65 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
66 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
67 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
68 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
69 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
70 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
71 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
72 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
73 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
74 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
75 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
76 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
77 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
78 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
79 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
80 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
81 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
82 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
90 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
91 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
92 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
93 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
94 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
95 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
96 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
107 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
108 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
109 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
110 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
128 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
129 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
132 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
136 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
137 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
138 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
139 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
142 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
160 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
163 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
172 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
173 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
176 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
177 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
178 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
179 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
180 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
181 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
182 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
183 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
184 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
185 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
186 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
187 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
188 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
189 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
190 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
191 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
192 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
193 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
194 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
195 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
196 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
197 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
198 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
199 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
200 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
201 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 63.24
Metatranscriptomes 0.4
Isolates 36.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.56
Nodule 36.36
Rhizoplane 1.98
Rhizosphere 45.45
Stem 0
Stem Tuber 0
Unclassified 12.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1005173 3300000546 Bacteria 1429
2 rootH1_10115292 3300003323 Bacteria 2635
3 Ga0055539_1005689 3300003752 Bacteria 1610
4 Ga0070658_10055310 3300005327 Bacteria 3224
5 Ga0070658_10148414 3300005327 Unclassified 1962
6 Ga0070660_100016463 3300005339 Bacteria 5366
7 Ga0070714_100296254 3300005435 Bacteria 1507
8 Ga0070663_100030089 3300005455 Bacteria 3718
9 Ga0070679_100070651 3300005530 Bacteria 3483
10 Ga0070679_100122391 3300005530 Bacteria 2586
11 Ga0070679_100129215 3300005530 Bacteria 2508
12 Ga0068855_100007273 3300005563 Bacteria 13418
13 Ga0068856_100005888 3300005614 Bacteria 12087
14 Ga0068856_100032973 3300005614 Bacteria 5072
15 Ga0068852_100007038 3300005616 Bacteria 8192
16 Ga0068852_100040146 3300005616 Bacteria 3946
17 Ga0075436_100057723 3300006914 Bacteria 2680
18 Ga0099824_1017765 3300006942 Bacteria 6053
19 Ga0099824_1020083 3300006942 Bacteria 5013
20 Ga0099822_1046273 3300006943 Bacteria 2043
21 Ga0099823_1031266 3300006944 Bacteria 4403
22 Ga0105238_10126995 3300009551 Bacteria 2529
23 Ga0105239_10020517 3300010375 Bacteria 7288
24 Ga0157373_10053920 3300013100 Unclassified 2858
25 Ga0157370_10187473 3300013104 Bacteria 1920
26 Ga0157369_10020332 3300013105 Bacteria 7421
27 Ga0157374_10005439 3300013296 Bacteria 10699
28 Ga0157372_10009253 3300013307 Bacteria 10477
29 Ga0157372_10026443 3300013307 Bacteria 6314
30 Ga0214544_1000004 3300021320 Bacteria 455869
31 Ga0214542_1000001 3300021321 Bacteria 1018696
32 Ga0214545_1000001 3300021324 Bacteria 1092817
33 Ga0214543_1000006 3300021327 Bacteria 443395
34 Ga0213874_10005058 3300021377 Bacteria 3051
35 Ga0213874_10027044 3300021377 Bacteria 1629
36 Ga0213876_10001901 3300021384 Bacteria 12562
37 Ga0213876_10047509 3300021384 Bacteria 2269
38 Ga0224712_10008499 3300022467 Bacteria 3047
39 Ga0209677_100828 3300025253 Bacteria 15410
40 Ga0209455_1002604 3300025272 Bacteria 6861
41 Ga0209455_1004876 3300025272 Bacteria 4271
42 Ga0209758_1003453 3300025297 Bacteria 14335
43 Ga0207705_10086142 3300025909 Bacteria 2296
44 Ga0207705_10117912 3300025909 Unclassified 1967
45 Ga0207657_10052983 3300025919 Unclassified 3518
46 Ga0207652_10013845 3300025921 Bacteria 6527
47 Ga0207652_10052399 3300025921 Bacteria 3502
48 Ga0207667_10094803 3300025949 Bacteria 3081
49 Ga0207702_10006939 3300026078 Bacteria 9698
50 Ga0207702_10229509 3300026078 Bacteria 1734
51 Ga0207674_10121275 3300026116 Bacteria 2582
52 Ga0207698_10118581 3300026142 Bacteria 2235
53 Ga0207698_10177953 3300026142 Bacteria 1880
54 Ga0209389_1000010 3300027296 Bacteria 223892
55 Ga0209389_1000216 3300027296 Bacteria 40414
56 Ga0209589_1000016 3300027357 Bacteria 223788
57 Ga0209489_100016 3300027361 Bacteria 223873
58 Ga0209489_102145 3300027361 Bacteria 40414
59 Ga0265340_10014952 3300031247 Bacteria 4042
60 Ga0265339_10002813 3300031249 Bacteria 12363
61 Ga0307405_10030900 3300031731 Bacteria 3146
62 Ga0307406_10044369 3300031901 Bacteria 2786
63 Ga0307412_10065134 3300031911 Bacteria 2465
64 Ga0373933_0111423 3300035724 Bacteria 1707
65 Ga0395899_0001185 3300037312 Bacteria 22977
66 Ga0395899_0047710 3300037312 Bacteria 3188
67 Ga0395900_0000394 3300037418 Bacteria 63170
68 Ga0395900_0002652 3300037418 Bacteria 19546
69 Ga0395900_0137307 3300037418 Bacteria 2505
70 Ga0395898_0001615 3300037466 Bacteria 30637
71 Ga0395898_0006497 3300037466 Bacteria 12489
72 Ga0395898_0275602 3300037466 Bacteria 1604
73 Ga0395898_0289565 3300037466 Bacteria 1562
74 Ga0436364_0145236 3300037853 Bacteria 6852
75 Ga0436364_0402830 3300037853 Bacteria 2352
76 Ga0436364_0794765 3300037853 Bacteria 162685
77 Ga0436364_1442014 3300037853 Bacteria 3534
78 Ga0395901_0045487 3300038443 Bacteria 4555
79 Ga0395901_0234731 3300038443 Bacteria 1914
80 Ga0395901_0339232 3300038443 Bacteria 1553
81 Ga0395901_0344082 3300038443 Bacteria 1540
82 Ga0436365_0403425 3300039437 Bacteria 50449
83 Ga0436365_0455576 3300039437 Bacteria 4287
84 Ga0436365_1812682 3300039437 Bacteria 3400
85 Ga0436361_1121085 3300039447 Bacteria 5442
86 Ga0436363_1216276 3300039450 Bacteria 4303
87 Ga0436363_1333305 3300039450 Bacteria 5286
88 Ga0451853_3108758 3300041512 Bacteria 2094
89 Ga0466972_0000149 3300044658 Bacteria 56799
90 Ga0466972_0000502 3300044658 Bacteria 19583
91 Ga0466966_0001034 3300044684 Bacteria 17813
92 Ga0466961_0000009 3300044693 Bacteria 139001
93 Ga0466961_0058157 3300044693 Bacteria 2460
94 Ga0466961_0086286 3300044693 Bacteria 1984
95 Ga0466963_0008245 3300044694 Bacteria 6244
96 Ga0466963_0022761 3300044694 Bacteria 3972
97 Ga0466963_0238549 3300044694 Bacteria 1275
98 Ga0466964_0046194 3300044706 Bacteria 1774
99 Ga0466971_0040384 3300044719 Bacteria 2096
100 Ga0466957_0019066 3300044842 Bacteria 4034
101 Ga0466957_0070671 3300044842 Bacteria 2157
102 Ga0466957_0172002 3300044842 Bacteria 1411
103 Ga0466960_0023600 3300044901 Bacteria 2764
104 Ga0466959_0002728 3300045049 Bacteria 11359
105 Ga0451576_0052506 3300045051 Bacteria 4271
106 Ga0466967_0020374 3300045976 Bacteria 5358
107 Ga0466967_0039484 3300045976 Bacteria 4059
108 Ga0466967_0060042 3300045976 Bacteria 3368
109 Ga0466967_0130559 3300045976 Bacteria 2332
110 Ga0466967_0478740 3300045976 Bacteria 1219
111 Ga0495617_066973 3300046452 Bacteria 1183
112 Ga0495590_0000721 3300046457 Bacteria 15128
113 Ga0495590_0004450 3300046457 Bacteria 5653
114 Ga0495638_0001239 3300046460 Bacteria 24050
115 Ga0495584_0004610 3300046491 Bacteria 7390
116 Ga0495584_0021692 3300046491 Bacteria 3261
117 Ga0495584_0054575 3300046491 Bacteria 2011
118 Ga0495596_0032681 3300046500 Bacteria 2074
119 Ga0495606_0001733 3300046507 Bacteria 28021
120 Ga0495606_0097846 3300046507 Bacteria 1792
121 Ga0495610_0013168 3300046512 Bacteria 4929
122 Ga0495632_0000379 3300046519 Bacteria 42470
123 Ga0495632_0006239 3300046519 Bacteria 7707
124 Ga0495643_0001666 3300046522 Bacteria 19506
125 Ga0495597_0005526 3300046542 Bacteria 6685
126 Ga0495668_0001340 3300046616 Bacteria 24198
127 Ga0495668_0015590 3300046616 Bacteria 4434
128 Ga0495668_0033183 3300046616 Bacteria 2901
129 Ga0495625_0000382 3300046660 Bacteria 67633
130 Ga0495625_0155779 3300046660 Bacteria 1533
131 Ga0495669_0002413 3300046684 Bacteria 7655
132 Ga0495671_0034530 3300046692 Bacteria 2571
133 Ga0495649_0000693 3300046694 Bacteria 27497
134 Ga0495589_0004075 3300046794 Bacteria 7831
135 Ga0495677_0043800 3300047445 Bacteria 1641
136 Ga0495686_0063878 3300047472 Bacteria 2280
137 Ga0495626_0050867 3300048091 Bacteria 1913
138 Ga0496100_0001256 3300048903 Bacteria 12372
139 Ga0496105_0033019 3300048908 Bacteria 4249
140 Ga0496110_0085498 3300048913 Bacteria 2815
141 Ga0496112_0087405 3300048915 Bacteria 3084
142 Ga0496112_0173528 3300048915 Bacteria 2121
143 Ga0496119_0054179 3300048922 Bacteria 2444
144 Ga0496121_0017212 3300048924 Bacteria 7402
145 Ga0496124_0028371 3300048927 Bacteria 5008
146 Ga0496125_0062753 3300048928 Bacteria 2968
147 Ga0495682_0025632 3300049460 Bacteria 2194
148 Ga0501042_0194756 3300049578 Bacteria 1462
149 Ga0501047_0137564 3300049581 Bacteria 2322
150 Ga0501070_0005760 3300049586 Bacteria 10566
151 Ga0501073_0014612 3300049589 Bacteria 5705
152 Ga0501074_0045351 3300049590 Bacteria 3181
153 Ga0501080_0010310 3300049742 Bacteria 8545
154 Ga0501044_0033097 3300049823 Bacteria 5432
155 Ga0501044_0089882 3300049823 Bacteria 3099
156 Ga0495601_0211232 3300053077 Bacteria 1268
157 Ga0500556_0013948 3300053104 Bacteria 2444
158 Ga0500562_005659 3300053108 Bacteria 3145
159 Ga0500658_0033165 3300053134 Bacteria 2029
160 Ga0500616_0000036 3300053153 Bacteria 390769
161 Ga0466962_0130942 3300061719 Bacteria 1212

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300061719 Ga0466962_0130942 Ga0466962_0130942_28_918 296
2 3300037853 Ga0436364_0145236 Ga0436364_0145236_812_1843 340
3 3300005327 Ga0070658_10148414 Ga0070658_101484142 342
4 3300005614 Ga0068856_100005888 Ga0068856_1000058887 342
5 3300022467 Ga0224712_10008499 Ga0224712_100084993 342
6 3300025909 Ga0207705_10117912 Ga0207705_101179122 342
7 3300025919 Ga0207657_10052983 Ga0207657_100529832 342
8 3300026078 Ga0207702_10006939 Ga0207702_100069394 342
9 iso_pu_bacteria 8019629233 8019636742 343
10 3300045976 Ga0466967_0478740 Ga0466967_0478740_153_1208 351
11 3300025297 Ga0209758_1003453 Ga0209758_10034532 353
12 3300044684 Ga0466966_0001034 Ga0466966_0001034_13567_14679 353
13 3300044693 Ga0466961_0000009 Ga0466961_0000009_87045_88157 353
14 3300045049 Ga0466959_0002728 Ga0466959_0002728_9699_10811 353
15 3300053104 Ga0500556_0013948 Ga0500556_0013948_1061_2173 353
16 3300048908 Ga0496105_0033019 Ga0496105_0033019_1984_3051 354
17 3300005455 Ga0070663_100030089 Ga0070663_1000300894 357
18 3300039437 Ga0436365_1812682 Ga0436365_1812682_761_1873 357
19 3300005327 Ga0070658_10055310 Ga0070658_100553102 358
20 3300005616 Ga0068852_100040146 Ga0068852_1000401462 358
21 3300025909 Ga0207705_10086142 Ga0207705_100861422 358
22 3300031247 Ga0265340_10014952 Ga0265340_100149523 358
23 3300031249 Ga0265339_10002813 Ga0265339_100028132 358
24 3300041512 Ga0451853_3108758 Ga0451853_3108758_347_1459 358
25 3300044658 Ga0466972_0000149 Ga0466972_0000149_6615_7727 358
26 3300026142 Ga0207698_10118581 Ga0207698_101185812 359
27 3300037312 Ga0395899_0047710 Ga0395899_0047710_1126_2238 359
28 3300037418 Ga0395900_0000394 Ga0395900_0000394_36819_37931 359
29 3300037466 Ga0395898_0006497 Ga0395898_0006497_6131_7243 359
30 3300038443 Ga0395901_0234731 Ga0395901_0234731_290_1402 359
31 3300037853 Ga0436364_0402830 Ga0436364_0402830_510_1661 360
32 3300006942 Ga0099824_1017765 Ga0099824_10177656 362
33 3300006944 Ga0099823_1031266 Ga0099823_10312664 362
34 3300027296 Ga0209389_1000216 Ga0209389_10002169 362
35 3300027361 Ga0209489_102145 Ga0209489_1021459 362
36 3300044693 Ga0466961_0086286 Ga0466961_0086286_410_1522 362
37 iso_pu_bacteria 2671180139 2671694300 365
38 3300046452 Ga0495617_066973 Ga0495617_066973_73_1173 366
39 iso_pu_bacteria 2507262055 2507510796 366
40 iso_pu_bacteria 2508501009 2508544595 366
41 iso_pu_bacteria 2508501042 2508693964 366
42 iso_pu_bacteria 2508501128 2509152021 366
43 iso_pu_bacteria 2513237092 2513622654 366
44 iso_pu_bacteria 2513237098 2513671272 366
45 iso_pu_bacteria 2513237161 2514017333 366
46 iso_pu_bacteria 2515154112 2515628059 366
47 iso_pu_bacteria 2617270735 2617351227 366
48 iso_pu_bacteria 2617270741 2617378498 366
49 iso_pu_bacteria 2824679649 2824680366 366
50 iso_pu_bacteria 2824704595 2824706013 366
51 iso_pu_bacteria 2824732956 2824737891 366
52 iso_pu_bacteria 2824746037 2824748452 366
53 iso_pu_bacteria 2824753945 2824758873 366
54 iso_pu_bacteria 2824763712 2824769344 366
55 iso_pu_bacteria 2838122688 2838122746 366
56 iso_pu_bacteria 2841941048 2841946205 366
57 iso_pu_bacteria 2841949485 2841950998 366
58 iso_pu_bacteria 2841966195 2841973391 366
59 iso_pu_bacteria 2841974524 2841982521 366
60 iso_pu_bacteria 2841983080 2841988813 366
61 iso_pu_bacteria 2874590934 2874592459 366
62 iso_pu_bacteria 2874645413 2874650152 366
63 iso_pu_bacteria 2876771140 2876775321 366
64 iso_pu_bacteria 2876818435 2876826326 366
65 iso_pu_bacteria 2879074833 2879079591 366
66 iso_pu_bacteria 2879099564 2879102428 366
67 iso_pu_bacteria 2879127579 2879129270 366
68 iso_pu_bacteria 2879142872 2879144912 366
69 iso_pu_bacteria 2881364244 2881368208 366
70 iso_pu_bacteria 2881665667 2881667721 366
71 iso_pu_bacteria 2903768456 2903768688 366
72 iso_pu_bacteria 2904711408 2904720137 366
73 iso_pu_bacteria 2908775508 2908780741 366
74 iso_pu_bacteria 2922386360 2922390368 366
75 iso_pu_bacteria 2922393267 2922397494 366
76 iso_pu_bacteria 2932784394 2932792262 366
77 iso_pu_bacteria 2932818245 2932826367 366
78 iso_pu_bacteria 2932828146 2932836413 366
79 iso_pu_bacteria 2935608549 2935612422 366
80 iso_pu_bacteria 2935648319 2935650256 366
81 iso_pu_bacteria 2935656913 2935658403 366
82 iso_pu_bacteria 2935703347 2935711202 366
83 iso_pu_bacteria 2935769743 2935775332 366
84 iso_pu_bacteria 2935777560 2935779466 366
85 iso_pu_bacteria 2935785616 2935791470 366
86 iso_pu_bacteria 2935793552 2935799782 366
87 iso_pu_bacteria 2935819856 2935823911 366
88 iso_pu_bacteria 2935847175 2935852942 366
89 iso_pu_bacteria 2935908558 2935913400 366
90 iso_pu_bacteria 2935916978 2935923297 366
91 iso_pu_bacteria 2935926038 2935931283 366
92 iso_pu_bacteria 2935934488 2935935565 366
93 iso_pu_bacteria 2935942939 2935947131 366
94 iso_pu_bacteria 2935951376 2935953774 366
95 iso_pu_bacteria 2935967501 2935968800 366
96 iso_pu_bacteria 2935975950 2935979454 366
97 iso_pu_bacteria 2935984226 2935985966 366
98 iso_pu_bacteria 2936011229 2936013185 366
99 iso_pu_bacteria 2936019824 2936021728 366
100 iso_pu_bacteria 2936028420 2936030478 366
101 iso_pu_bacteria 2936046547 2936047922 366
102 iso_pu_bacteria 2936055302 2936057923 366
103 iso_pu_bacteria 8016522445 8016530856 366
104 iso_pu_bacteria 8016530956 8016536148 366
105 iso_pu_bacteria 8016548790 8016552808 366
106 iso_pu_bacteria 8016557553 8016561187 366
107 iso_pu_bacteria 8016595262 8016599045 366
108 iso_pu_bacteria 8016603502 8016612011 366
109 iso_pu_bacteria 8016613128 8016621794 366
110 iso_pu_bacteria 8016622563 8016628055 366
111 iso_pu_bacteria 8016630954 8016637720 366
112 iso_pu_bacteria 8017057580 8017067118 366
113 iso_pu_bacteria 8019530166 8019535873 366
114 iso_pu_bacteria 8019538911 8019543605 366
115 iso_pu_bacteria 8019547302 8019555167 366
116 iso_pu_bacteria 8019576017 8019586083 366
117 iso_pu_bacteria 8019586578 8019586826 366
118 iso_pu_bacteria 8019597564 8019607766 366
119 iso_pu_bacteria 8019608314 8019608797 366
120 iso_pu_bacteria 8019619141 8019625542 366
121 iso_pu_bacteria 8019638758 8019642879 366
122 iso_pu_bacteria 8019659431 8019664548 366
123 iso_pu_bacteria 8019668869 8019674133 366
124 iso_pu_bacteria 8019678201 8019681986 366
125 iso_pu_bacteria 8019687851 8019694480 366
126 iso_pu_bacteria 8056681323 8056682772 366
127 iso_pu_bacteria 8056689827 8056693244 366
128 3300005435 Ga0070714_100296254 Ga0070714_1002962542 368
129 3300005530 Ga0070679_100070651 Ga0070679_1000706514 368
130 3300005530 Ga0070679_100129215 Ga0070679_1001292152 368
131 3300013307 Ga0157372_10009253 Ga0157372_1000925311 368
132 3300021377 Ga0213874_10005058 Ga0213874_100050583 368
133 3300025921 Ga0207652_10013845 Ga0207652_100138454 368
134 3300025921 Ga0207652_10052399 Ga0207652_100523992 368
135 3300035724 Ga0373933_0111423 Ga0373933_0111423_133_1245 368
136 3300037853 Ga0436364_1442014 Ga0436364_1442014_306_1418 368
137 3300039450 Ga0436363_1216276 Ga0436363_1216276_1618_2730 368
138 3300003323 rootH1_10115292 rootH1_101152922 369
139 3300005339 Ga0070660_100016463 Ga0070660_1000164633 369
140 3300013100 Ga0157373_10053920 Ga0157373_100539202 369
141 3300013104 Ga0157370_10187473 Ga0157370_101874732 369
142 3300013105 Ga0157369_10020332 Ga0157369_100203325 369
143 3300013296 Ga0157374_10005439 Ga0157374_100054397 369
144 3300013307 Ga0157372_10026443 Ga0157372_100264436 369
145 3300037853 Ga0436364_0794765 Ga0436364_0794765_138452_139567 369
146 3300039447 Ga0436361_1121085 Ga0436361_1121085_857_1966 369
147 3300044693 Ga0466961_0058157 Ga0466961_0058157_1212_2324 369
148 3300044694 Ga0466963_0238549 Ga0466963_0238549_131_1246 369
149 3300044842 Ga0466957_0070671 Ga0466957_0070671_660_1772 369
150 3300044842 Ga0466957_0172002 Ga0466957_0172002_37_1152 369
151 3300048903 Ga0496100_0001256 Ga0496100_0001256_3934_5133 369
152 3300048915 Ga0496112_0087405 Ga0496112_0087405_371_1483 369
153 3300049578 Ga0501042_0194756 Ga0501042_0194756_13_1155 369
154 3300053077 Ga0495601_0211232 Ga0495601_0211232_130_1242 369
155 3300000546 LJNas_1005173 LJNas_10051731 370
156 3300003752 Ga0055539_1005689 Ga0055539_10056892 370
157 3300005530 Ga0070679_100122391 Ga0070679_1001223912 370
158 3300005563 Ga0068855_100007273 Ga0068855_1000072733 370
159 3300005614 Ga0068856_100032973 Ga0068856_1000329735 370
160 3300005616 Ga0068852_100007038 Ga0068852_1000070388 370
161 3300006914 Ga0075436_100057723 Ga0075436_1000577232 370
162 3300006942 Ga0099824_1020083 Ga0099824_10200834 370
163 3300006943 Ga0099822_1046273 Ga0099822_10462732 370
164 3300009551 Ga0105238_10126995 Ga0105238_101269952 370
165 3300010375 Ga0105239_10020517 Ga0105239_100205173 370
166 3300021320 Ga0214544_1000004 Ga0214544_1000004126 370
167 3300021321 Ga0214542_1000001 Ga0214542_1000001227 370
168 3300021324 Ga0214545_1000001 Ga0214545_1000001294 370
169 3300021327 Ga0214543_1000006 Ga0214543_1000006291 370
170 3300021377 Ga0213874_10027044 Ga0213874_100270442 370
171 3300021384 Ga0213876_10001901 Ga0213876_100019012 370
172 3300021384 Ga0213876_10047509 Ga0213876_100475092 370
173 3300025253 Ga0209677_100828 Ga0209677_1008282 370
174 3300025272 Ga0209455_1002604 Ga0209455_10026046 370
175 3300025272 Ga0209455_1004876 Ga0209455_10048762 370
176 3300025949 Ga0207667_10094803 Ga0207667_100948032 370
177 3300026078 Ga0207702_10229509 Ga0207702_102295091 370
178 3300026116 Ga0207674_10121275 Ga0207674_101212753 370
179 3300026142 Ga0207698_10177953 Ga0207698_101779532 370
180 3300027296 Ga0209389_1000010 Ga0209389_100001036 370
181 3300027357 Ga0209589_1000016 Ga0209589_1000016178 370
182 3300027361 Ga0209489_100016 Ga0209489_10001636 370
183 3300031731 Ga0307405_10030900 Ga0307405_100309002 370
184 3300031901 Ga0307406_10044369 Ga0307406_100443692 370
185 3300031911 Ga0307412_10065134 Ga0307412_100651342 370
186 3300037312 Ga0395899_0001185 Ga0395899_0001185_10249_11367 370
187 3300037418 Ga0395900_0002652 Ga0395900_0002652_9701_10819 370
188 3300037418 Ga0395900_0137307 Ga0395900_0137307_207_1319 370
189 3300037466 Ga0395898_0001615 Ga0395898_0001615_20237_21355 370
190 3300037466 Ga0395898_0275602 Ga0395898_0275602_192_1412 370
191 3300037466 Ga0395898_0289565 Ga0395898_0289565_234_1346 370
192 3300038443 Ga0395901_0045487 Ga0395901_0045487_2062_3180 370
193 3300038443 Ga0395901_0339232 Ga0395901_0339232_159_1271 370
194 3300038443 Ga0395901_0344082 Ga0395901_0344082_314_1426 370
195 3300039437 Ga0436365_0403425 Ga0436365_0403425_17589_18701 370
196 3300039437 Ga0436365_0455576 Ga0436365_0455576_2235_3347 370
197 3300039450 Ga0436363_1333305 Ga0436363_1333305_4085_5197 370
198 3300044658 Ga0466972_0000502 Ga0466972_0000502_3235_4347 370
199 3300044694 Ga0466963_0008245 Ga0466963_0008245_1587_2699 370
200 3300044694 Ga0466963_0022761 Ga0466963_0022761_78_1190 370
201 3300044706 Ga0466964_0046194 Ga0466964_0046194_102_1214 370
202 3300044719 Ga0466971_0040384 Ga0466971_0040384_864_1976 370
203 3300044842 Ga0466957_0019066 Ga0466957_0019066_1766_2878 370
204 3300044901 Ga0466960_0023600 Ga0466960_0023600_311_1423 370
205 3300045051 Ga0451576_0052506 Ga0451576_0052506_2922_4040 370
206 3300045976 Ga0466967_0020374 Ga0466967_0020374_3026_4138 370
207 3300045976 Ga0466967_0039484 Ga0466967_0039484_2222_3334 370
208 3300045976 Ga0466967_0060042 Ga0466967_0060042_2036_3148 370
209 3300045976 Ga0466967_0130559 Ga0466967_0130559_237_1349 370
210 3300046457 Ga0495590_0000721 Ga0495590_0000721_5355_6467 370
211 3300046457 Ga0495590_0004450 Ga0495590_0004450_451_1563 370
212 3300046460 Ga0495638_0001239 Ga0495638_0001239_15042_16154 370
213 3300046491 Ga0495584_0004610 Ga0495584_0004610_5713_6825 370
214 3300046491 Ga0495584_0021692 Ga0495584_0021692_1386_2498 370
215 3300046491 Ga0495584_0054575 Ga0495584_0054575_790_1902 370
216 3300046500 Ga0495596_0032681 Ga0495596_0032681_852_1964 370
217 3300046507 Ga0495606_0001733 Ga0495606_0001733_19662_20774 370
218 3300046507 Ga0495606_0097846 Ga0495606_0097846_300_1412 370
219 3300046512 Ga0495610_0013168 Ga0495610_0013168_520_1632 370
220 3300046519 Ga0495632_0000379 Ga0495632_0000379_23422_24534 370
221 3300046519 Ga0495632_0006239 Ga0495632_0006239_1037_2149 370
222 3300046522 Ga0495643_0001666 Ga0495643_0001666_5289_6401 370
223 3300046542 Ga0495597_0005526 Ga0495597_0005526_3850_4962 370
224 3300046616 Ga0495668_0001340 Ga0495668_0001340_683_1795 370
225 3300046616 Ga0495668_0015590 Ga0495668_0015590_1338_2450 370
226 3300046616 Ga0495668_0033183 Ga0495668_0033183_189_1301 370
227 3300046660 Ga0495625_0000382 Ga0495625_0000382_53385_54497 370
228 3300046660 Ga0495625_0155779 Ga0495625_0155779_184_1296 370
229 3300046684 Ga0495669_0002413 Ga0495669_0002413_2179_3291 370
230 3300046692 Ga0495671_0034530 Ga0495671_0034530_94_1206 370
231 3300046694 Ga0495649_0000693 Ga0495649_0000693_18489_19601 370
232 3300046794 Ga0495589_0004075 Ga0495589_0004075_4964_6076 370
233 3300047445 Ga0495677_0043800 Ga0495677_0043800_317_1429 370
234 3300047472 Ga0495686_0063878 Ga0495686_0063878_578_1690 370
235 3300048091 Ga0495626_0050867 Ga0495626_0050867_412_1524 370
236 3300048913 Ga0496110_0085498 Ga0496110_0085498_73_1185 370
237 3300048915 Ga0496112_0173528 Ga0496112_0173528_686_1798 370
238 3300048922 Ga0496119_0054179 Ga0496119_0054179_147_1259 370
239 3300048924 Ga0496121_0017212 Ga0496121_0017212_1847_2989 370
240 3300048927 Ga0496124_0028371 Ga0496124_0028371_2874_3986 370
241 3300048928 Ga0496125_0062753 Ga0496125_0062753_574_1686 370
242 3300049460 Ga0495682_0025632 Ga0495682_0025632_412_1524 370
243 3300049581 Ga0501047_0137564 Ga0501047_0137564_204_1316 370
244 3300049586 Ga0501070_0005760 Ga0501070_0005760_1109_2221 370
245 3300049589 Ga0501073_0014612 Ga0501073_0014612_2143_3255 370
246 3300049590 Ga0501074_0045351 Ga0501074_0045351_2044_3156 370
247 3300049742 Ga0501080_0010310 Ga0501080_0010310_2387_3499 370
248 3300049823 Ga0501044_0033097 Ga0501044_0033097_426_1538 370
249 3300049823 Ga0501044_0089882 Ga0501044_0089882_1190_2302 370
250 3300053108 Ga0500562_005659 Ga0500562_005659_1503_2615 370
251 3300053134 Ga0500658_0033165 Ga0500658_0033165_666_1778 370
252 3300053153 Ga0500616_0000036 Ga0500616_0000036_95813_96925 370
253 iso_pu_bacteria 2857524615 2857529571 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

40

180

0.95

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

198

314

0.92

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

40

165

0.9

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

41

172

0.9

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

198

379

0.89

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

41

184

0.87

PF13460

NAD_binding_10

NAD(P)H-binding

44

194

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dnt-assembly1.cif.gz_A-2 udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid 0.9231 2 350
6wja-assembly1.cif.gz_A udp-glcnac c4-epimerase mutant s121a/y146f from pseudomonas protegens in complex with udp-galnac 0.9161 3 345
6wjb-assembly1.cif.gz_A udp-glcnac c4-epimerase from pseudomonas protegens in complex with nad and udp-glcnac 0.9151 3 345
6dnt-assembly1.cif.gz_A-2 udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid 0.9089 2 350
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.9057 3 348
ID Description Score Start End Superfamily
af_L7N670_2_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9426 3 344 3.40.50.720
af_L7N670_2_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9372 3 344 3.40.50.720
af_P72050_1_314_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9267 3 350 3.40.50.720
af_A0A0R0KMW5_231_418_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9163 169 346 3.40.50.720
4zrnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9145 3 278 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A537M5A6-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9883 186 370
AF-A0A250KYI1-F1-model_v4 UDP-galactose 4-epimerase 0.9839 1 370
AF-X5Y8N8-F1-model_v4 Dehydratase 0.9837 1 370
AF-A0A1E4AFP6-F1-model_v4 Nucleoside-diphosphate-sugar epimerase 0.9815 1 370
AF-A0A250KYI1-F1-model_v4 UDP-galactose 4-epimerase 0.9813 1 370

Feature Viewer

pLDDT pTM Quality
90.65 0.91 High
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Predicted Structure (AlphaFold2)

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