F362152

General Info

Members Datasets Scaffolds Average Seq Length
251 185 229 371

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100309411|Ga0070683_1003094112
Length 402
Sequence VRTRLRTELGVLDTFFGRFNDIVGPVFFSMPQKYIPVNEPLLDGNEKQYLIQCIDTGWISSDGPFIKQFEESMARRVGRKHGIAVCNGSVALDAAVVALGIGPGDEVILPTFTIISCAAAIVRAGATPIFVDCDRSTWNMDVAHVEARITPRTKAIMVVHIYGLPVDMDPVFTLAARHGLKVIEDAAEAHGQTYKNQPCGSFGDISTFSFYPNKHVTTGEGGMLLTDDDGLAERCRSLRNLCFQSKRRFVHEELGWNFRMSNLQAALGVAQLERLDEFAARKRQMGKRYMELLRDAKGLQLPIERTDYAENIFWVLGVVLRDEVPFDAAEAMRRLDSAGIGTRPFFWPMHEQPIFRKAGWFKSDSCPVAENIARRGFYLPSGLAITDEQIERVAATVLTTIG

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
3 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
4 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
5 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
6 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
7 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
8 2738541302 Pedobacter sp. CF074 Isolate Unclassified
9 2791355256 Rhizobium sp. M10 Isolate Nodule
10 2831426010 Nostoc sp. 106C Isolate Unclassified
11 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
12 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
13 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
14 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
15 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
16 2936381700 Rhizobium chutanense C16 Isolate Unclassified
17 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
21 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
22 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
27 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
100 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
101 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
108 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
120 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
126 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
127 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
135 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
136 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
137 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
138 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
139 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
140 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
141 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
142 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
143 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
162 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
171 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
172 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
173 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
174 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
175 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
179 8005382845 Rhizobium sp. R634 Isolate Nodule
180 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
181 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
182 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
183 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
184 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
185 8024501048 Rhizobium sp. H4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.24
Metatranscriptomes 0
Isolates 8.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.19
Nodule 4.38
Rhizoplane 3.98
Rhizosphere 79.28
Stem 0
Stem Tuber 0
Unclassified 9.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_3566687 2162886012 Unclassified 1283
2 JGI24739J22299_10000313 3300001989 Bacteria 16571
3 rootH1_10027324 3300003323 Bacteria 28607
4 Ga0055540_1000111 3300003792 Bacteria 88263
5 Ga0065714_10069259 3300005288 Bacteria 4272
6 Ga0065704_10125653 3300005289 Bacteria 1700
7 Ga0065707_10083533 3300005295 Bacteria 8842
8 Ga0065707_10087902 3300005295 Unclassified 4848
9 Ga0070658_10000192 3300005327 Bacteria 54044
10 Ga0070683_100309411 3300005329 Bacteria 1503
11 Ga0070670_100331932 3300005331 Bacteria 1334
12 Ga0070688_100085526 3300005365 Bacteria 2050
13 Ga0070709_10011300 3300005434 Unclassified 4971
14 Ga0070713_100000323 3300005436 Bacteria 31221
15 Ga0070708_100024030 3300005445 Bacteria 5190
16 Ga0070708_100164185 3300005445 Bacteria 2071
17 Ga0068867_100255237 3300005459 Bacteria 1427
18 Ga0070706_100113923 3300005467 Bacteria 2518
19 Ga0070707_100001703 3300005468 Bacteria 21201
20 Ga0070698_100008355 3300005471 Bacteria 11188
21 Ga0070698_100166671 3300005471 Bacteria 2145
22 Ga0070699_100056887 3300005518 Bacteria 3387
23 Ga0070697_100004692 3300005536 Bacteria 10479
24 Ga0070695_100113267 3300005545 Bacteria 1844
25 Ga0070696_100030431 3300005546 Bacteria 3695
26 Ga0068855_100008895 3300005563 Bacteria 12140
27 Ga0068855_100032245 3300005563 Bacteria 6256
28 Ga0081455_10000778 3300005937 Bacteria 41016
29 Ga0070717_10036821 3300006028 Bacteria 3971
30 Ga0070712_100000964 3300006175 Bacteria 17325
31 Ga0097621_100145260 3300006237 Bacteria 2030
32 Ga0068871_100130013 3300006358 Bacteria 2134
33 Ga0105240_10041388 3300009093 Bacteria 5881
34 Ga0111539_10182301 3300009094 Bacteria 2452
35 Ga0114129_10134785 3300009147 Bacteria 3389
36 Ga0105248_10108511 3300009177 Bacteria 3130
37 Ga0105248_10369691 3300009177 Bacteria 1614
38 Ga0105237_10026516 3300009545 Bacteria 5923
39 Ga0105238_10022972 3300009551 Bacteria 6358
40 Ga0105239_10004043 3300010375 Bacteria 17736
41 Ga0157370_10001266 3300013104 Bacteria 31553
42 Ga0157370_10055832 3300013104 Bacteria 3760
43 Ga0157370_10233513 3300013104 Bacteria 1702
44 Ga0157369_10166990 3300013105 Bacteria 2320
45 Ga0157378_10015531 3300013297 Bacteria 6670
46 Ga0163162_10000099 3300013306 Bacteria 78696
47 Ga0163162_10101834 3300013306 Bacteria 2964
48 Ga0157375_10181852 3300013308 Bacteria 2254
49 Ga0163163_10010041 3300014325 Bacteria 8493
50 Ga0163163_10104245 3300014325 Unclassified 2861
51 Ga0182008_10001185 3300014497 Bacteria 17968
52 Ga0182008_10059656 3300014497 Bacteria 1882
53 Ga0163161_10000287 3300017792 Bacteria 44102
54 Ga0213872_10036472 3300021361 Bacteria 2247
55 Ga0209026_1012538 3300025250 Bacteria 1473
56 Ga0209673_1001115 3300025273 Bacteria 29920
57 Ga0209676_1018255 3300025292 Bacteria 2452
58 Ga0207426_1003033 3300025302 Bacteria 9714
59 Ga0209051_1000084 3300025303 Bacteria 190324
60 Ga0209257_1004073 3300025304 Bacteria 11723
61 Ga0207713_1033247 3300025735 Bacteria 2255
62 Ga0207680_10185028 3300025903 Bacteria 1411
63 Ga0207647_10018311 3300025904 Bacteria 4741
64 Ga0207705_10001365 3300025909 Bacteria 19526
65 Ga0207693_10010365 3300025915 Bacteria 7565
66 Ga0207693_10132258 3300025915 Bacteria 1961
67 Ga0207646_10000744 3300025922 Bacteria 42374
68 Ga0207694_10035459 3300025924 Bacteria 3827
69 Ga0207700_10001186 3300025928 Bacteria 14977
70 Ga0207667_10008507 3300025949 Bacteria 12186
71 Ga0207667_10056505 3300025949 Bacteria 4123
72 Ga0207678_10177573 3300026067 Bacteria 1818
73 Ga0207648_10345430 3300026089 Unclassified 1341
74 Ga0209974_10026714 3300027876 Bacteria 1910
75 Ga0265319_1005215 3300028563 Bacteria 6274
76 Ga0307515_10000011 3300028794 Bacteria 633903
77 Ga0265320_10001847 3300031240 Bacteria 15027
78 Ga0265327_10000188 3300031251 Bacteria 130649
79 Ga0265327_10014437 3300031251 Bacteria 5167
80 Ga0265316_10012638 3300031344 Bacteria 7559
81 Ga0265313_10006190 3300031595 Bacteria 8574
82 Ga0265314_10003243 3300031711 Bacteria 15904
83 Ga0265314_10029057 3300031711 Bacteria 4113
84 Ga0316576_10007953 3300031727 Bacteria 6715
85 Ga0307405_10134078 3300031731 Bacteria 1716
86 Ga0307413_10007650 3300031824 Bacteria 5040
87 Ga0307410_10081950 3300031852 Bacteria 2268
88 Ga0307407_10105620 3300031903 Bacteria 1757
89 Ga0307414_10157469 3300032004 Bacteria 1800
90 Ga0307411_10025753 3300032005 Bacteria 3530
91 Ga0307411_10073733 3300032005 Bacteria 2323
92 Ga0373934_0037063 3300035086 Bacteria 1920
93 Ga0373933_0000404 3300035724 Bacteria 27329
94 Ga0316582_0077092 3300036647 Unclassified 2169
95 Ga0395905_0012304 3300037471 Bacteria 8237
96 Ga0395905_0045641 3300037471 Bacteria 4110
97 Ga0436364_1168190 3300037853 Bacteria 1341
98 Ga0395901_0001787 3300038443 Bacteria 22178
99 Ga0436361_0204432 3300039447 Bacteria 5218
100 Ga0436361_0619195 3300039447 Bacteria 2867
101 Ga0451835_1056244 3300041492 Bacteria 3327
102 Ga0451845_0849214 3300041501 Bacteria 2359
103 Ga0451843_0140760 3300041509 Bacteria 2815
104 Ga0451577_0000106 3300042876 Bacteria 184359
105 Ga0451577_0000549 3300042876 Bacteria 61207
106 Ga0451577_0000638 3300042876 Bacteria 55899
107 Ga0451577_0010752 3300042876 Bacteria 8709
108 Ga0451577_0045562 3300042876 Unclassified 3926
109 Ga0451577_0150590 3300042876 Bacteria 2093
110 Ga0451577_0178001 3300042876 Bacteria 1917
111 Ga0451577_0461681 3300042876 Bacteria 1153
112 Ga0453683_0000347 3300044673 Bacteria 56122
113 Ga0453683_0008487 3300044673 Bacteria 6892
114 Ga0453683_0030216 3300044673 Unclassified 3426
115 Ga0453683_0033131 3300044673 Unclassified 3258
116 Ga0453684_0000314 3300044712 Bacteria 205428
117 Ga0453684_0000477 3300044712 Bacteria 158917
118 Ga0453684_0000765 3300044712 Bacteria 111511
119 Ga0453684_0000980 3300044712 Bacteria 93444
120 Ga0453684_0001644 3300044712 Bacteria 60704
121 Ga0453684_0007080 3300044712 Bacteria 20939
122 Ga0453684_0018103 3300044712 Bacteria 10845
123 Ga0453684_0066614 3300044712 Unclassified 4585
124 Ga0451576_0018579 3300045051 Bacteria 7612
125 Ga0451576_0056374 3300045051 Bacteria 4109
126 Ga0451576_0137103 3300045051 Bacteria 2552
127 Ga0451576_0208507 3300045051 Bacteria 2041
128 Ga0451576_0319893 3300045051 Unclassified 1623
129 Ga0451576_0488832 3300045051 Unclassified 1293
130 Ga0451576_0529646 3300045051 Bacteria 1238
131 Ga0495592_0022293 3300046454 Bacteria 4818
132 Ga0495603_0011396 3300046455 Bacteria 5384
133 Ga0495590_0000847 3300046457 Bacteria 13825
134 Ga0495629_0004959 3300046459 Bacteria 9983
135 Ga0495629_0032416 3300046459 Bacteria 3700
136 Ga0495641_0002576 3300046461 Bacteria 14231
137 Ga0495651_0039483 3300046462 Bacteria 3675
138 Ga0495653_0003138 3300046463 Bacteria 13241
139 Ga0495580_0065976 3300046472 Bacteria 2534
140 Ga0495580_0067203 3300046472 Bacteria 2508
141 Ga0495582_0008727 3300046473 Bacteria 5589
142 Ga0495662_0005315 3300046476 Bacteria 6454
143 Ga0495664_0004112 3300046477 Bacteria 7943
144 Ga0495664_0006874 3300046477 Bacteria 6296
145 Ga0495664_0023510 3300046477 Bacteria 3577
146 Ga0495594_0019474 3300046499 Bacteria 3606
147 Ga0495606_0061672 3300046507 Bacteria 2397
148 Ga0495618_0025628 3300046514 Bacteria 3660
149 Ga0495620_0035996 3300046515 Bacteria 2219
150 Ga0495628_0087542 3300046516 Bacteria 2414
151 Ga0495628_0232618 3300046516 Bacteria 1381
152 Ga0495630_0001043 3300046517 Bacteria 19080
153 Ga0495630_0386166 3300046517 Bacteria 1072
154 Ga0495648_0001045 3300046524 Bacteria 28091
155 Ga0495652_0004611 3300046529 Bacteria 13137
156 Ga0495652_0096016 3300046529 Bacteria 2414
157 Ga0495665_0000127 3300046531 Bacteria 36226
158 Ga0495665_0070562 3300046531 Unclassified 1841
159 Ga0495640_0017242 3300046533 Bacteria 5385
160 Ga0495586_0041847 3300046535 Bacteria 2467
161 Ga0495586_0088632 3300046535 Bacteria 1707
162 Ga0495587_0030394 3300046536 Bacteria 3276
163 Ga0495597_0027397 3300046542 Bacteria 2613
164 Ga0495645_0076155 3300046543 Bacteria 2414
165 Ga0495645_0100699 3300046543 Bacteria 2054
166 Ga0495634_0010293 3300046642 Bacteria 6854
167 Ga0495625_0003740 3300046660 Bacteria 14805
168 Ga0495635_0023768 3300046663 Bacteria 4270
169 Ga0495661_0003373 3300046665 Bacteria 11833
170 Ga0495588_0002415 3300046674 Bacteria 7994
171 Ga0495599_0013142 3300046678 Bacteria 5116
172 Ga0495623_0014316 3300046679 Bacteria 5134
173 Ga0495646_0011762 3300046680 Bacteria 5564
174 Ga0495646_0022334 3300046680 Bacteria 3992
175 Ga0495669_0030848 3300046684 Bacteria 2353
176 Ga0495613_0251196 3300046689 Bacteria 1234
177 Ga0495624_0004643 3300046690 Bacteria 10007
178 Ga0495624_0019654 3300046690 Bacteria 4503
179 Ga0495600_0055591 3300046809 Bacteria 2585
180 Ga0495581_0001677 3300047315 Bacteria 12340
181 Ga0495604_0036955 3300047317 Bacteria 3848
182 Ga0495604_0048521 3300047317 Bacteria 3302
183 Ga0495674_0095491 3300047319 Bacteria 2534
184 Ga0495672_0038263 3300047320 Bacteria 2928
185 Ga0495680_0008996 3300047322 Bacteria 9023
186 Ga0495680_0033003 3300047322 Bacteria 4195
187 Ga0495680_0066732 3300047322 Bacteria 2753
188 Ga0495683_0006016 3300047323 Bacteria 6665
189 Ga0495675_0022603 3300047444 Bacteria 4009
190 Ga0495679_009727 3300047446 Bacteria 3826
191 Ga0495684_0040602 3300047471 Bacteria 3566
192 Ga0495593_0001235 3300047673 Bacteria 14957
193 Ga0495593_0003152 3300047673 Bacteria 9900
194 Ga0495593_0019578 3300047673 Bacteria 3794
195 Ga0495593_0046106 3300047673 Bacteria 2324
196 Ga0495602_0010631 3300048088 Bacteria 9549
197 Ga0495602_0057304 3300048088 Bacteria 3419
198 Ga0495602_0117021 3300048088 Bacteria 2152
199 Ga0495614_0037490 3300048089 Bacteria 2079
200 Ga0496101_0123524 3300048904 Bacteria 1959
201 Ga0496102_0010210 3300048905 Bacteria 8070
202 Ga0496102_0249274 3300048905 Bacteria 1674
203 Ga0496104_0137909 3300048907 Bacteria 2344
204 Ga0496104_0182679 3300048907 Bacteria 2008
205 Ga0496109_0058212 3300048912 Bacteria 3530
206 Ga0496109_0172608 3300048912 Bacteria 2029
207 Ga0496109_0214995 3300048912 Bacteria 1808
208 Ga0496110_0174905 3300048913 Bacteria 1948
209 Ga0496112_0298641 3300048915 Bacteria 1556
210 Ga0496116_0046919 3300048919 Bacteria 2912
211 Ga0496117_0114361 3300048920 Bacteria 1673
212 Ga0496118_0144698 3300048921 Bacteria 1499
213 Ga0496121_0027339 3300048924 Bacteria 5339
214 Ga0496121_0034968 3300048924 Bacteria 4510
215 Ga0496124_0024941 3300048927 Bacteria 5425
216 Ga0496125_0111517 3300048928 Bacteria 1979
217 Ga0501034_0001481 3300049571 Bacteria 31010
218 Ga0501046_0004029 3300049580 Bacteria 13408
219 Ga0501047_0031527 3300049581 Bacteria 5112
220 Ga0501250_002511 3300049680 Bacteria 1669
221 Ga0501257_009136 3300049686 Bacteria 2234
222 Ga0501259_007421 3300049688 Bacteria 1755
223 Ga0501080_0062557 3300049742 Bacteria 3464
224 Ga0501080_0190910 3300049742 Unclassified 1882
225 Ga0501081_0271326 3300049743 Bacteria 1241
226 Ga0501280_008074 3300049776 Bacteria 1467
227 nmdc:mga05p37_398354_c1 3300050507 Bacteria 1608
228 Ga0500641_0073419 3300053096 Bacteria 1443
229 Ga0500616_0015343 3300053153 Bacteria 4383

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0319893 Ga0451576_0319893_634_1605 297
2 3300039447 Ga0436361_0619195 Ga0436361_0619195_1598_2605 305
3 3300037853 Ga0436364_1168190 Ga0436364_1168190_342_1322 326
4 3300042876 Ga0451577_0461681 Ga0451577_0461681_71_1102 330
5 3300046517 Ga0495630_0386166 Ga0495630_0386166_59_1060 330
6 3300046542 Ga0495597_0027397 Ga0495597_0027397_1592_2593 330
7 3300046689 Ga0495613_0251196 Ga0495613_0251196_216_1217 330
8 3300048921 Ga0496118_0144698 Ga0496118_0144698_16_1017 330
9 3300042876 Ga0451577_0000638 Ga0451577_0000638_40003_41121 341
10 3300044712 Ga0453684_0000765 Ga0453684_0000765_15241_16359 341
11 3300021361 Ga0213872_10036472 Ga0213872_100364722 342
12 3300039447 Ga0436361_0204432 Ga0436361_0204432_1390_2520 342
13 3300046680 Ga0495646_0011762 Ga0495646_0011762_17_1060 344
14 3300005563 Ga0068855_100008895 Ga0068855_1000088954 352
15 3300025949 Ga0207667_10008507 Ga0207667_100085074 352
16 3300035086 Ga0373934_0037063 Ga0373934_0037063_653_1771 353
17 3300035724 Ga0373933_0000404 Ga0373933_0000404_13248_14366 353
18 3300048912 Ga0496109_0058212 Ga0496109_0058212_1844_2905 353
19 3300048915 Ga0496112_0298641 Ga0496112_0298641_68_1129 353
20 3300049742 Ga0501080_0190910 Ga0501080_0190910_117_1235 353
21 3300003323 rootH1_10027324 rootH1_1002732427 355
22 3300038443 Ga0395901_0001787 Ga0395901_0001787_15270_16388 359
23 3300053153 Ga0500616_0015343 Ga0500616_0015343_2672_3787 359
24 3300031824 Ga0307413_10007650 Ga0307413_100076505 362
25 3300032005 Ga0307411_10073733 Ga0307411_100737332 362
26 iso_pu_bacteria 2585427687 2586207865 362
27 iso_pu_bacteria 2738541302 2738852155 362
28 3300017792 Ga0163161_10000287 Ga0163161_1000028724 364
29 iso_pu_bacteria 2512047030 2512352171 365
30 iso_pu_bacteria 2513237093 2513632185 365
31 iso_pu_bacteria 2513237162 2514021022 365
32 iso_pu_bacteria 2515154114 2515642869 365
33 iso_pu_bacteria 2517287029 2517409561 365
34 iso_pu_bacteria 2791355256 2793295172 365
35 iso_pu_bacteria 2838016132 2838020326 365
36 iso_pu_bacteria 2885270888 2885278494 365
37 iso_pu_bacteria 2904445276 2904446827 365
38 iso_pu_bacteria 2936381700 2936383785 365
39 iso_pu_bacteria 8005382845 8005387258 365
40 iso_pu_bacteria 8005497431 8005498700 365
41 iso_pu_bacteria 8005556819 8005560673 365
42 iso_pu_bacteria 8005619151 8005619895 365
43 iso_pu_bacteria 8005668836 8005670111 365
44 iso_pu_bacteria 8018163183 8018167857 365
45 iso_pu_bacteria 8024501048 8024501562 365
46 3300013104 Ga0157370_10001266 Ga0157370_100012669 366
47 3300005288 Ga0065714_10069259 Ga0065714_100692594 367
48 3300009094 Ga0111539_10182301 Ga0111539_101823012 367
49 3300013104 Ga0157370_10055832 Ga0157370_100558322 367
50 3300013104 Ga0157370_10233513 Ga0157370_102335132 367
51 3300013306 Ga0163162_10000099 Ga0163162_1000009940 367
52 3300013306 Ga0163162_10101834 Ga0163162_101018343 367
53 3300014497 Ga0182008_10001185 Ga0182008_100011855 367
54 3300048907 Ga0496104_0137909 Ga0496104_0137909_515_1618 367
55 3300048927 Ga0496124_0024941 Ga0496124_0024941_2315_3430 367
56 3300049571 Ga0501034_0001481 Ga0501034_0001481_1333_2445 367
57 3300049776 Ga0501280_008074 Ga0501280_008074_214_1338 367
58 iso_pu_bacteria 2831426010 2831430277 367
59 iso_pu_bacteria 2842722452 2842725400 367
60 iso_pu_bacteria 2848694841 2848700450 367
61 3300005445 Ga0070708_100164185 Ga0070708_1001641852 368
62 3300005468 Ga0070707_100001703 Ga0070707_1000017038 368
63 3300005471 Ga0070698_100008355 Ga0070698_1000083555 368
64 3300005536 Ga0070697_100004692 Ga0070697_10000469211 368
65 3300006028 Ga0070717_10036821 Ga0070717_100368213 368
66 3300006237 Ga0097621_100145260 Ga0097621_1001452602 368
67 3300006358 Ga0068871_100130013 Ga0068871_1001300132 368
68 3300014325 Ga0163163_10104245 Ga0163163_101042454 368
69 3300025915 Ga0207693_10132258 Ga0207693_101322582 368
70 3300025922 Ga0207646_10000744 Ga0207646_1000074444 368
71 3300028563 Ga0265319_1005215 Ga0265319_10052154 368
72 3300031240 Ga0265320_10001847 Ga0265320_100018478 368
73 3300031595 Ga0265313_10006190 Ga0265313_100061902 368
74 3300044673 Ga0453683_0008487 Ga0453683_0008487_2480_3646 368
75 3300044673 Ga0453683_0033131 Ga0453683_0033131_442_1629 368
76 2162886012 MBSR1b_contig_3566687 MBSR1b_0127.00002230 369
77 3300001989 JGI24739J22299_10000313 JGI24739J22299_100003136 369
78 3300003792 Ga0055540_1000111 Ga0055540_100011139 369
79 3300005289 Ga0065704_10125653 Ga0065704_101256532 369
80 3300005295 Ga0065707_10083533 Ga0065707_100835335 369
81 3300005295 Ga0065707_10087902 Ga0065707_100879022 369
82 3300005327 Ga0070658_10000192 Ga0070658_100001927 369
83 3300005329 Ga0070683_100309411 Ga0070683_1003094112 369
84 3300005331 Ga0070670_100331932 Ga0070670_1003319322 369
85 3300005365 Ga0070688_100085526 Ga0070688_1000855261 369
86 3300005434 Ga0070709_10011300 Ga0070709_100113005 369
87 3300005436 Ga0070713_100000323 Ga0070713_1000003238 369
88 3300005445 Ga0070708_100024030 Ga0070708_1000240303 369
89 3300005459 Ga0068867_100255237 Ga0068867_1002552372 369
90 3300005467 Ga0070706_100113923 Ga0070706_1001139232 369
91 3300005471 Ga0070698_100166671 Ga0070698_1001666712 369
92 3300005518 Ga0070699_100056887 Ga0070699_1000568873 369
93 3300005545 Ga0070695_100113267 Ga0070695_1001132672 369
94 3300005546 Ga0070696_100030431 Ga0070696_1000304312 369
95 3300005563 Ga0068855_100032245 Ga0068855_1000322457 369
96 3300005937 Ga0081455_10000778 Ga0081455_1000077817 369
97 3300006175 Ga0070712_100000964 Ga0070712_1000009645 369
98 3300009093 Ga0105240_10041388 Ga0105240_100413883 369
99 3300009147 Ga0114129_10134785 Ga0114129_101347854 369
100 3300009177 Ga0105248_10108511 Ga0105248_101085113 369
101 3300009177 Ga0105248_10369691 Ga0105248_103696912 369
102 3300009545 Ga0105237_10026516 Ga0105237_100265161 369
103 3300009551 Ga0105238_10022972 Ga0105238_100229721 369
104 3300010375 Ga0105239_10004043 Ga0105239_1000404312 369
105 3300013105 Ga0157369_10166990 Ga0157369_101669902 369
106 3300013297 Ga0157378_10015531 Ga0157378_100155316 369
107 3300013308 Ga0157375_10181852 Ga0157375_101818522 369
108 3300014325 Ga0163163_10010041 Ga0163163_100100418 369
109 3300014497 Ga0182008_10059656 Ga0182008_100596563 369
110 3300025250 Ga0209026_1012538 Ga0209026_10125382 369
111 3300025273 Ga0209673_1001115 Ga0209673_100111524 369
112 3300025292 Ga0209676_1018255 Ga0209676_10182552 369
113 3300025302 Ga0207426_1003033 Ga0207426_10030333 369
114 3300025303 Ga0209051_1000084 Ga0209051_100008495 369
115 3300025304 Ga0209257_1004073 Ga0209257_10040732 369
116 3300025735 Ga0207713_1033247 Ga0207713_10332473 369
117 3300025903 Ga0207680_10185028 Ga0207680_101850281 369
118 3300025904 Ga0207647_10018311 Ga0207647_100183113 369
119 3300025909 Ga0207705_10001365 Ga0207705_100013657 369
120 3300025915 Ga0207693_10010365 Ga0207693_100103655 369
121 3300025924 Ga0207694_10035459 Ga0207694_100354591 369
122 3300025928 Ga0207700_10001186 Ga0207700_1000118611 369
123 3300025949 Ga0207667_10056505 Ga0207667_100565055 369
124 3300026067 Ga0207678_10177573 Ga0207678_101775732 369
125 3300026089 Ga0207648_10345430 Ga0207648_103454302 369
126 3300027876 Ga0209974_10026714 Ga0209974_100267142 369
127 3300028794 Ga0307515_10000011 Ga0307515_10000011491 369
128 3300031251 Ga0265327_10000188 Ga0265327_100001889 369
129 3300031251 Ga0265327_10014437 Ga0265327_100144375 369
130 3300031344 Ga0265316_10012638 Ga0265316_100126387 369
131 3300031711 Ga0265314_10003243 Ga0265314_100032439 369
132 3300031711 Ga0265314_10029057 Ga0265314_100290573 369
133 3300031727 Ga0316576_10007953 Ga0316576_100079536 369
134 3300031731 Ga0307405_10134078 Ga0307405_101340781 369
135 3300031852 Ga0307410_10081950 Ga0307410_100819502 369
136 3300031903 Ga0307407_10105620 Ga0307407_101056202 369
137 3300032004 Ga0307414_10157469 Ga0307414_101574692 369
138 3300032005 Ga0307411_10025753 Ga0307411_100257532 369
139 3300036647 Ga0316582_0077092 Ga0316582_0077092_394_1512 369
140 3300037471 Ga0395905_0012304 Ga0395905_0012304_2711_3835 369
141 3300037471 Ga0395905_0045641 Ga0395905_0045641_842_1966 369
142 3300041492 Ga0451835_1056244 Ga0451835_1056244_1736_2845 369
143 3300041501 Ga0451845_0849214 Ga0451845_0849214_772_1881 369
144 3300041509 Ga0451843_0140760 Ga0451843_0140760_301_1410 369
145 3300042876 Ga0451577_0000106 Ga0451577_0000106_146253_147362 369
146 3300042876 Ga0451577_0000549 Ga0451577_0000549_17026_18174 369
147 3300042876 Ga0451577_0010752 Ga0451577_0010752_4416_5543 369
148 3300042876 Ga0451577_0045562 Ga0451577_0045562_1292_2482 369
149 3300042876 Ga0451577_0150590 Ga0451577_0150590_30_1139 369
150 3300042876 Ga0451577_0178001 Ga0451577_0178001_321_1466 369
151 3300044673 Ga0453683_0000347 Ga0453683_0000347_32257_33378 369
152 3300044673 Ga0453683_0030216 Ga0453683_0030216_1627_2769 369
153 3300044712 Ga0453684_0000314 Ga0453684_0000314_23400_24509 369
154 3300044712 Ga0453684_0000477 Ga0453684_0000477_14992_16179 369
155 3300044712 Ga0453684_0000980 Ga0453684_0000980_56111_57220 369
156 3300044712 Ga0453684_0001644 Ga0453684_0001644_41878_43026 369
157 3300044712 Ga0453684_0007080 Ga0453684_0007080_13744_14868 369
158 3300044712 Ga0453684_0018103 Ga0453684_0018103_1603_2721 369
159 3300044712 Ga0453684_0066614 Ga0453684_0066614_1627_2736 369
160 3300045051 Ga0451576_0018579 Ga0451576_0018579_2695_3816 369
161 3300045051 Ga0451576_0056374 Ga0451576_0056374_1269_2417 369
162 3300045051 Ga0451576_0137103 Ga0451576_0137103_1413_2528 369
163 3300045051 Ga0451576_0208507 Ga0451576_0208507_561_1688 369
164 3300045051 Ga0451576_0488832 Ga0451576_0488832_27_1169 369
165 3300045051 Ga0451576_0529646 Ga0451576_0529646_39_1160 369
166 3300046454 Ga0495592_0022293 Ga0495592_0022293_2276_3406 369
167 3300046455 Ga0495603_0011396 Ga0495603_0011396_1428_2558 369
168 3300046457 Ga0495590_0000847 Ga0495590_0000847_2797_3915 369
169 3300046459 Ga0495629_0004959 Ga0495629_0004959_1383_2513 369
170 3300046459 Ga0495629_0032416 Ga0495629_0032416_1163_2281 369
171 3300046461 Ga0495641_0002576 Ga0495641_0002576_1125_2255 369
172 3300046462 Ga0495651_0039483 Ga0495651_0039483_1813_2943 369
173 3300046463 Ga0495653_0003138 Ga0495653_0003138_3273_4391 369
174 3300046472 Ga0495580_0065976 Ga0495580_0065976_709_1839 369
175 3300046472 Ga0495580_0067203 Ga0495580_0067203_1275_2393 369
176 3300046473 Ga0495582_0008727 Ga0495582_0008727_2827_3957 369
177 3300046476 Ga0495662_0005315 Ga0495662_0005315_1318_2448 369
178 3300046477 Ga0495664_0004112 Ga0495664_0004112_4579_5697 369
179 3300046477 Ga0495664_0006874 Ga0495664_0006874_709_1839 369
180 3300046477 Ga0495664_0023510 Ga0495664_0023510_2113_3231 369
181 3300046499 Ga0495594_0019474 Ga0495594_0019474_1890_3020 369
182 3300046507 Ga0495606_0061672 Ga0495606_0061672_1167_2285 369
183 3300046514 Ga0495618_0025628 Ga0495618_0025628_2089_3219 369
184 3300046515 Ga0495620_0035996 Ga0495620_0035996_174_1292 369
185 3300046516 Ga0495628_0087542 Ga0495628_0087542_709_1839 369
186 3300046516 Ga0495628_0232618 Ga0495628_0232618_230_1348 369
187 3300046517 Ga0495630_0001043 Ga0495630_0001043_7396_8514 369
188 3300046524 Ga0495648_0001045 Ga0495648_0001045_2827_3957 369
189 3300046529 Ga0495652_0004611 Ga0495652_0004611_9965_11083 369
190 3300046529 Ga0495652_0096016 Ga0495652_0096016_709_1839 369
191 3300046531 Ga0495665_0000127 Ga0495665_0000127_7049_8167 369
192 3300046531 Ga0495665_0070562 Ga0495665_0070562_693_1817 369
193 3300046533 Ga0495640_0017242 Ga0495640_0017242_2810_3940 369
194 3300046535 Ga0495586_0041847 Ga0495586_0041847_629_1759 369
195 3300046535 Ga0495586_0088632 Ga0495586_0088632_233_1351 369
196 3300046536 Ga0495587_0030394 Ga0495587_0030394_1438_2568 369
197 3300046543 Ga0495645_0076155 Ga0495645_0076155_709_1839 369
198 3300046543 Ga0495645_0100699 Ga0495645_0100699_554_1672 369
199 3300046642 Ga0495634_0010293 Ga0495634_0010293_1809_2939 369
200 3300046660 Ga0495625_0003740 Ga0495625_0003740_10378_11487 369
201 3300046663 Ga0495635_0023768 Ga0495635_0023768_547_1677 369
202 3300046665 Ga0495661_0003373 Ga0495661_0003373_8168_9298 369
203 3300046674 Ga0495588_0002415 Ga0495588_0002415_801_1931 369
204 3300046678 Ga0495599_0013142 Ga0495599_0013142_966_2096 369
205 3300046679 Ga0495623_0014316 Ga0495623_0014316_1696_2814 369
206 3300046680 Ga0495646_0022334 Ga0495646_0022334_2055_3173 369
207 3300046684 Ga0495669_0030848 Ga0495669_0030848_1120_2238 369
208 3300046690 Ga0495624_0004643 Ga0495624_0004643_8169_9299 369
209 3300046690 Ga0495624_0019654 Ga0495624_0019654_2851_3969 369
210 3300046809 Ga0495600_0055591 Ga0495600_0055591_703_1833 369
211 3300047315 Ga0495581_0001677 Ga0495581_0001677_3170_4300 369
212 3300047317 Ga0495604_0036955 Ga0495604_0036955_706_1824 369
213 3300047317 Ga0495604_0048521 Ga0495604_0048521_1464_2594 369
214 3300047319 Ga0495674_0095491 Ga0495674_0095491_709_1839 369
215 3300047320 Ga0495672_0038263 Ga0495672_0038263_1072_2190 369
216 3300047322 Ga0495680_0008996 Ga0495680_0008996_188_1306 369
217 3300047322 Ga0495680_0033003 Ga0495680_0033003_2825_3955 369
218 3300047322 Ga0495680_0066732 Ga0495680_0066732_651_1769 369
219 3300047323 Ga0495683_0006016 Ga0495683_0006016_3400_4518 369
220 3300047444 Ga0495675_0022603 Ga0495675_0022603_1686_2816 369
221 3300047446 Ga0495679_009727 Ga0495679_009727_785_1903 369
222 3300047471 Ga0495684_0040602 Ga0495684_0040602_240_1370 369
223 3300047673 Ga0495593_0001235 Ga0495593_0001235_2251_3369 369
224 3300047673 Ga0495593_0003152 Ga0495593_0003152_709_1839 369
225 3300047673 Ga0495593_0019578 Ga0495593_0019578_1444_2562 369
226 3300047673 Ga0495593_0046106 Ga0495593_0046106_1082_2200 369
227 3300048088 Ga0495602_0010631 Ga0495602_0010631_3814_4932 369
228 3300048088 Ga0495602_0057304 Ga0495602_0057304_833_1951 369
229 3300048088 Ga0495602_0117021 Ga0495602_0117021_314_1444 369
230 3300048089 Ga0495614_0037490 Ga0495614_0037490_709_1839 369
231 3300048904 Ga0496101_0123524 Ga0496101_0123524_361_1479 369
232 3300048905 Ga0496102_0010210 Ga0496102_0010210_6119_7237 369
233 3300048905 Ga0496102_0249274 Ga0496102_0249274_132_1250 369
234 3300048907 Ga0496104_0182679 Ga0496104_0182679_249_1367 369
235 3300048912 Ga0496109_0172608 Ga0496109_0172608_892_2010 369
236 3300048912 Ga0496109_0214995 Ga0496109_0214995_632_1750 369
237 3300048913 Ga0496110_0174905 Ga0496110_0174905_805_1923 369
238 3300048919 Ga0496116_0046919 Ga0496116_0046919_695_1813 369
239 3300048920 Ga0496117_0114361 Ga0496117_0114361_194_1312 369
240 3300048924 Ga0496121_0027339 Ga0496121_0027339_3693_4811 369
241 3300048924 Ga0496121_0034968 Ga0496121_0034968_927_2042 369
242 3300048928 Ga0496125_0111517 Ga0496125_0111517_553_1671 369
243 3300049580 Ga0501046_0004029 Ga0501046_0004029_10880_12013 369
244 3300049581 Ga0501047_0031527 Ga0501047_0031527_2660_3793 369
245 3300049680 Ga0501250_002511 Ga0501250_002511_249_1367 369
246 3300049686 Ga0501257_009136 Ga0501257_009136_323_1441 369
247 3300049688 Ga0501259_007421 Ga0501259_007421_455_1573 369
248 3300049742 Ga0501080_0062557 Ga0501080_0062557_1907_3031 369
249 3300049743 Ga0501081_0271326 Ga0501081_0271326_26_1150 369
250 3300050507 nmdc:mga05p37_398354_c1 nmdc:mga05p37_398354_c1_247_1362 369
251 3300053096 Ga0500641_0073419 Ga0500641_0073419_180_1307 369

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

40

398

0.96

PF00155

Aminotran_1_2

Aminotransferase class I and II

54

162

0.91

PF01212

Beta_elim_lyase

Beta-eliminating lyase

60

317

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dr4-assembly1.cif.gz_A gdp-perosamine synthase k186a mutant from caulobacter crescentus with bound sugar ligand 0.9711 4 369
3bn1-assembly2.cif.gz_C crystal structure of gdp-perosamine synthase 0.9662 2 369
3dr4-assembly1.cif.gz_A gdp-perosamine synthase k186a mutant from caulobacter crescentus with bound sugar ligand 0.9658 4 369
3bn1-assembly2.cif.gz_C crystal structure of gdp-perosamine synthase 0.9636 2 369
4oca-assembly1.cif.gz_A-2 cryatal structure of arnb k188a complexted with plp and udp-ara4n 0.9617 2 367
ID Description Score Start End Superfamily
3bn1B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9752 1 241 3.40.640.10
af_L0T6V0_4_199_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9676 1 195 3.40.640.10
3bn1B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9631 1 241 3.40.640.10
af_L0T6V0_4_199_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.958 1 195 3.40.640.10
1mdxA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9534 1 240 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A246F2R5-F1-model_v4 Aminotransferase DegT 0.9858 1 126 GO:0000271
GO:0008483
GO:0030170
AF-X1L0T4-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9837 37 158 GO:0000271
GO:0008483
GO:0030170
AF-A0A0M9E7E7-F1-model_v4 Perosamine synthetase 0.9834 1 149 GO:0000271
GO:0008483
GO:0030170
AF-A0A658NNU7-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9816 35 125 GO:0000271
GO:0008483
GO:0030170
AF-A0A0G0DK08-F1-model_v4 DegT/DnrJ/EryC1/StrS aminotransferase 0.9784 1 184 GO:0000271
GO:0008483
GO:0030170

Feature Viewer

pLDDT pTM Quality
96.16 0.93 High
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Predicted Structure (AlphaFold2)

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