F361914

General Info

Members Datasets Scaffolds Average Seq Length
250 200 500 322

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0048611|Ga0496122_0048611_1874_2917
Length 347
Sequence MKKSAIHRASRGVNCMRRSIAAAMLVPFLGLAGTFAAPGVALAADDAATYPSRVVTIVVPFPAGGATDITGRLLAEGLSKKWGQSVVVENRPGAGGNLGSEVVARAAPDGYSIILGVTGSHGINTSLYSNMRYHPLKDFEPVTQATLYPNAIVVNNEVPANNLQELIALLKADPGKYSYGSDGNGTASHLGMEMLRSKGHFPIAHIPYRGSTPMITDLIGGQIQVGITGLPAVQAYVKSGKLKMIAVTTAERFPSAPDYPTVAEQGFPGFSAPPWSGFFVPKGTPKPIIDKLSADMRSVMEQPDTKAKMLAAGSEFTPSTPEQFRAFVDSEITKWAEAVKISGAKVD

Samples

Sample ID Description Type Environment
1 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
49 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
73 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
100 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
101 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
102 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
103 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
167 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
168 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
169 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
170 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
172 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
173 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
174 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
179 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
180 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
181 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
182 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
183 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
184 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
185 2643221569 Achromobacter sp. Root565 Isolate Unclassified
186 2643221570 Acidovorax sp. Root568 Isolate Unclassified
187 2643221594 Achromobacter sp. Root170 Isolate Unclassified
188 2643221596 Acidovorax sp. Root70 Isolate Unclassified
189 2643221621 Achromobacter sp. Root83 Isolate Unclassified
190 2643221652 Acidovorax sp. Root402 Isolate Unclassified
191 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
192 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
193 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
194 2858950400 Achromobacter sp. K91 Isolate Unclassified
195 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
196 2929520902 Variovorax beijingensis 502 Isolate Unclassified
197 2941479691
198 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
199 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
200 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.8
Metatranscriptomes 0
Isolates 9.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.4
Nodule 0
Rhizoplane 4.8
Rhizosphere 54.4
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496122_0048611 3300048925 Bacteria 3258
2 JGI25153J46596_10004149 3300003215 Bacteria 7870
3 rootL2_10003010 3300003322 Bacteria 1314
4 JGI25404J52841_10000997 3300003659 Bacteria 4650
5 Ga0070670_100226082 3300005331 Bacteria 1628
6 Ga0070677_10104434 3300005333 Bacteria 1255
7 Ga0070680_100007168 3300005336 Bacteria 8497
8 Ga0070680_100015027 3300005336 Bacteria 6060
9 Ga0070669_100189938 3300005353 Bacteria 1611
10 Ga0070671_100201413 3300005355 Bacteria 1688
11 Ga0070673_100128758 3300005364 Bacteria 2121
12 Ga0070688_100170835 3300005365 Bacteria 1500
13 Ga0070667_100316894 3300005367 Bacteria 1407
14 Ga0070714_100070428 3300005435 Bacteria 3023
15 Ga0070713_100117516 3300005436 Bacteria 2327
16 Ga0070700_100181554 3300005441 Bacteria 1465
17 Ga0070662_100176956 3300005457 Bacteria 1679
18 Ga0070697_100333573 3300005536 Bacteria 1308
19 Ga0070686_100043058 3300005544 Bacteria 2831
20 Ga0070664_100215248 3300005564 Bacteria 1717
21 Ga0068859_100118269 3300005617 Bacteria 2716
22 Ga0068864_100012357 3300005618 Bacteria 7057
23 Ga0068858_100004813 3300005842 Bacteria 13224
24 Ga0068860_100104519 3300005843 Bacteria 2704
25 Ga0081455_10002333 3300005937 Bacteria 22645
26 Ga0081540_1002942 3300005983 Bacteria 13695
27 Ga0081539_10000785 3300005985 Bacteria 61844
28 Ga0070717_10023790 3300006028 Bacteria 4858
29 Ga0070717_10351041 3300006028 Bacteria 1319
30 Ga0075365_10002166 3300006038 Bacteria 9453
31 Ga0075365_10043297 3300006038 Bacteria 2947
32 Ga0075365_10062512 3300006038 Bacteria 2490
33 Ga0075365_10066823 3300006038 Bacteria 2413
34 Ga0075368_10024973 3300006042 Bacteria 2291
35 Ga0075368_10037280 3300006042 Bacteria 1901
36 Ga0075363_100008874 3300006048 Bacteria 4705
37 Ga0075364_10075406 3300006051 Bacteria 2225
38 Ga0070716_100035012 3300006173 Bacteria 2758
39 Ga0075362_10075711 3300006177 Bacteria 1544
40 Ga0075366_10007144 3300006195 Bacteria 6151
41 Ga0075366_10051087 3300006195 Unclassified 2456
42 Ga0075366_10130496 3300006195 Bacteria 1516
43 Ga0075436_100180069 3300006914 Bacteria 1494
44 Ga0097620_100118268 3300006931 Bacteria 2716
45 Ga0075435_100303272 3300007076 Bacteria 1366
46 Ga0114129_10521006 3300009147 Bacteria 1550
47 Ga0105243_10065598 3300009148 Bacteria 2917
48 Ga0105248_10040399 3300009177 Bacteria 5229
49 Ga0105237_10157923 3300009545 Bacteria 2265
50 Ga0105249_10621206 3300009553 Bacteria 1136
51 Ga0105246_10100535 3300011119 Bacteria 2104
52 Ga0157370_10011918 3300013104 Bacteria 9065
53 Ga0163163_10004833 3300014325 Bacteria 11574
54 Ga0182008_10026405 3300014497 Bacteria 2945
55 Ga0163161_10002943 3300017792 Bacteria 12066
56 Ga0224572_1016793 3300024225 Bacteria 1404
57 Ga0209676_1007300 3300025292 Bacteria 5228
58 Ga0209758_1000074 3300025297 Bacteria 275577
59 Ga0209758_1002427 3300025297 Bacteria 19052
60 Ga0209050_1002122 3300025298 Bacteria 18066
61 Ga0207682_10132003 3300025893 Bacteria 1115
62 Ga0207642_10082296 3300025899 Bacteria 1567
63 Ga0207649_10079332 3300025920 Bacteria 2121
64 Ga0207649_10101169 3300025920 Bacteria 1908
65 Ga0207650_10426571 3300025925 Bacteria 1101
66 Ga0207700_10018360 3300025928 Bacteria 4697
67 Ga0207664_10020576 3300025929 Bacteria 4894
68 Ga0207644_10019642 3300025931 Bacteria 4588
69 Ga0207706_10065874 3300025933 Bacteria 3189
70 Ga0207706_10087286 3300025933 Bacteria 2743
71 Ga0207709_10068924 3300025935 Bacteria 2237
72 Ga0207709_10129864 3300025935 Bacteria 1715
73 Ga0207669_10053930 3300025937 Bacteria 2426
74 Ga0207669_10127196 3300025937 Bacteria 1743
75 Ga0207665_10007438 3300025939 Bacteria 7243
76 Ga0207711_10010491 3300025941 Bacteria 7694
77 Ga0207703_10004273 3300026035 Bacteria 11752
78 Ga0207703_10289157 3300026035 Bacteria 1491
79 Ga0207639_10153441 3300026041 Bacteria 1932
80 Ga0207708_10249694 3300026075 Bacteria 1429
81 Ga0207676_10019248 3300026095 Bacteria 4977
82 Ga0209813_10032133 3300027866 Bacteria 1553
83 Ga0268266_10140935 3300028379 Bacteria 2164
84 Ga0307517_10000392 3300028786 Bacteria 74887
85 Ga0307515_10000572 3300028794 Bacteria 86935
86 Ga0307515_10278013 3300028794 Bacteria 1385
87 Ga0307511_10000086 3300030521 Bacteria 77931
88 Ga0307512_10170450 3300030522 Bacteria 1249
89 Ga0265327_10065035 3300031251 Bacteria 1846
90 Ga0307513_10022141 3300031456 Bacteria 7477
91 Ga0307513_10121725 3300031456 Bacteria 2575
92 Ga0307513_10169802 3300031456 Bacteria 2060
93 Ga0307408_100037497 3300031548 Bacteria 3415
94 Ga0307514_10036740 3300031649 Bacteria 3892
95 Ga0265314_10019348 3300031711 Bacteria 5276
96 Ga0265342_10051057 3300031712 Bacteria 2468
97 Ga0307412_10005088 3300031911 Bacteria 7355
98 Ga0307412_10006316 3300031911 Bacteria 6692
99 Ga0307416_100240022 3300032002 Bacteria 1755
100 Ga0307507_10047722 3300033179 Bacteria 4177
101 Ga0307507_10124896 3300033179 Bacteria 2041
102 Ga0373946_0052468 3300035171 Bacteria 1710
103 Ga0373935_0033774 3300035692 Bacteria 3186
104 Ga0373927_0170676 3300035695 Bacteria 1426
105 Ga0373947_0060723 3300035725 Bacteria 2296
106 Ga0395900_0381917 3300037418 Bacteria 1376
107 Ga0395905_0000428 3300037471 Bacteria 58781
108 Ga0395905_0109665 3300037471 Bacteria 2591
109 Ga0395905_0190221 3300037471 Bacteria 1925
110 Ga0395901_0267312 3300038443 Bacteria 1779
111 Ga0436365_1368459 3300039437 Bacteria 1592
112 Ga0451577_0017632 3300042876 Bacteria 6593
113 Ga0453684_0229182 3300044712 Bacteria 2146
114 Ga0495592_0029803 3300046454 Bacteria 4130
115 Ga0495592_0094697 3300046454 Bacteria 2137
116 Ga0495606_0002467 3300046507 Bacteria 21441
117 Ga0495610_0065735 3300046512 Bacteria 1710
118 Ga0495616_0002525 3300046513 Bacteria 12097
119 Ga0495628_0030628 3300046516 Bacteria 4356
120 Ga0495630_0067916 3300046517 Bacteria 2680
121 Ga0495631_0001338 3300046518 Bacteria 15069
122 Ga0495637_0027656 3300046520 Bacteria 2534
123 Ga0495637_0040007 3300046520 Bacteria 2020
124 Ga0495663_0050621 3300046525 Bacteria 1285
125 Ga0495621_0084738 3300046539 Bacteria 1187
126 Ga0495633_0078325 3300046558 Bacteria 1539
127 Ga0495667_0235429 3300046559 Bacteria 1167
128 Ga0495656_0041947 3300046615 Bacteria 1914
129 Ga0495668_0081630 3300046616 Bacteria 1774
130 Ga0495634_0021586 3300046642 Bacteria 4548
131 Ga0495625_0017370 3300046660 Bacteria 5634
132 Ga0495588_0061410 3300046674 Bacteria 1946
133 Ga0495588_0079973 3300046674 Bacteria 1706
134 Ga0495671_0016187 3300046692 Bacteria 3987
135 Ga0495660_0050945 3300046810 Bacteria 2254
136 Ga0495674_0186406 3300047319 Bacteria 1726
137 Ga0495676_0009307 3300047321 Bacteria 8955
138 Ga0495685_024065 3300047447 Bacteria 2096
139 Ga0495684_0017213 3300047471 Bacteria 5564
140 Ga0495593_0003947 3300047673 Bacteria 8857
141 Ga0495602_0066364 3300048088 Bacteria 3109
142 Ga0495602_0214778 3300048088 Bacteria 1457
143 Ga0496101_0068170 3300048904 Bacteria 2600
144 Ga0496102_0194876 3300048905 Bacteria 1909
145 Ga0496104_0012511 3300048907 Bacteria 7630
146 Ga0496105_0010915 3300048908 Bacteria 7156
147 Ga0496108_0024568 3300048911 Bacteria 4963
148 Ga0496109_0095539 3300048912 Bacteria 2752
149 Ga0496111_0011944 3300048914 Bacteria 5869
150 Ga0496111_0195565 3300048914 Bacteria 1503
151 Ga0496113_0064524 3300048916 Bacteria 2769
152 Ga0496114_0029737 3300048917 Bacteria 4491
153 Ga0496116_0012926 3300048919 Bacteria 6775
154 Ga0496117_0015157 3300048920 Bacteria 6594
155 Ga0496118_0012559 3300048921 Bacteria 8113
156 Ga0496119_0013777 3300048922 Bacteria 6400
157 Ga0496119_0073958 3300048922 Bacteria 1986
158 Ga0496121_0001265 3300048924 Bacteria 43624
159 Ga0496121_0031344 3300048924 Bacteria 4859
160 Ga0496122_0000350 3300048925 Bacteria 99606
161 Ga0496122_0057885 3300048925 Bacteria 2874
162 Ga0496123_0000747 3300048926 Bacteria 52598
163 Ga0496123_0013575 3300048926 Bacteria 6821
164 Ga0496124_0000004 3300048927 Bacteria 976131
165 Ga0496124_0000085 3300048927 Bacteria 203358
166 Ga0496124_0028885 3300048927 Bacteria 4951
167 Ga0496124_0132676 3300048927 Bacteria 1977
168 Ga0496124_0141540 3300048927 Bacteria 1897
169 Ga0496125_0000105 3300048928 Bacteria 200717
170 Ga0496125_0027544 3300048928 Bacteria 5150
171 Ga0496125_0155321 3300048928 Bacteria 1564
172 Ga0501032_0015110 3300049569 Bacteria 5452
173 Ga0501033_0084730 3300049570 Bacteria 2322
174 Ga0501034_0009541 3300049571 Bacteria 10159
175 Ga0501036_0001361 3300049572 Bacteria 18750
176 Ga0501037_0005389 3300049573 Bacteria 9312
177 Ga0501038_0012526 3300049574 Bacteria 7750
178 Ga0501039_0014984 3300049575 Bacteria 5930
179 Ga0501043_0007883 3300049579 Bacteria 8419
180 Ga0501046_0017389 3300049580 Bacteria 6002
181 Ga0501048_0014681 3300049582 Bacteria 5795
182 Ga0501067_0000887 3300049583 Bacteria 16114
183 Ga0501069_0009438 3300049585 Bacteria 5148
184 Ga0501071_0032419 3300049587 Bacteria 3710
185 Ga0501072_0117862 3300049588 Bacteria 2115
186 Ga0501073_0004035 3300049589 Bacteria 11033
187 Ga0501074_0093551 3300049590 Bacteria 2152
188 Ga0501083_0146564 3300049744 Bacteria 1546
189 Ga0501035_0073843 3300049822 Bacteria 3017
190 Ga0501044_0004447 3300049823 Bacteria 15680
191 Ga0501044_0225262 3300049823 Bacteria 1824
192 Ga0501045_0002804 3300049824 Bacteria 11908
193 nmdc:mga03683_154573_c1 3300050489 Unclassified 1037
194 nmdc:mga03n38_128174_c1 3300050490 Unclassified 1255
195 nmdc:mga03n38_21660_c1 3300050490 Bacteria 2590
196 nmdc:mga0yw44_28790_c1 3300050492 Bacteria 3200
197 nmdc:mga0yw44_33855_c1 3300050492 Bacteria 2989
198 nmdc:mga0yw44_6057_c1 3300050492 Bacteria 5797
199 nmdc:mga0yw44_65098_c1 3300050492 Bacteria 2245
200 nmdc:mga0k408_2419_c1 3300050493 Bacteria 9933
201 nmdc:mga0k408_33721_c1 3300050493 Bacteria 2929
202 nmdc:mga04h51_9805_c1 3300050495 Bacteria 2610
203 nmdc:mga07m45_179979_c1 3300050496 Bacteria 1229
204 Ga0495601_0006858 3300053077 Bacteria 6671
205 Ga0500610_0000409 3300053079 Bacteria 13147
206 Ga0500610_0001385 3300053079 Bacteria 8224
207 Ga0495619_0013188 3300053085 Bacteria 5209
208 Ga0500646_0000193 3300053090 Bacteria 18346
209 Ga0500651_0000015 3300053093 Bacteria 161416
210 Ga0500641_0022105 3300053096 Bacteria 2432
211 Ga0500562_014274 3300053108 Bacteria 2034
212 Ga0500569_006403 3300053109 Bacteria 2584
213 Ga0500571_000008 3300053110 Bacteria 87309
214 Ga0500593_000327 3300053117 Bacteria 19196
215 Ga0500595_024996 3300053119 Bacteria 2078
216 Ga0500607_002118 3300053121 Bacteria 16516
217 Ga0500626_031117 3300053128 Bacteria 2409
218 Ga0500642_0098068 3300053130 Bacteria 1360
219 Ga0500559_0035101 3300053136 Bacteria 2164
220 Ga0500561_0026809 3300053137 Bacteria 1415
221 Ga0500568_0000620 3300053139 Bacteria 25622
222 Ga0500586_000393 3300053145 Bacteria 8742
223 Ga0500590_001784 3300053148 Bacteria 9082
224 Ga0500604_0003634 3300053151 Bacteria 4149
225 Ga0500627_0000151 3300053158 Bacteria 20432
226 Ga0500636_0005718 3300053177 Bacteria 7111
227 Ga0500637_0032523 3300053178 Bacteria 2909
228 2599904892 2599185292 Bacteria 6290804
229 2599905082 2599185292 Bacteria 6290804
230 2643860473 2643221569 Bacteria 6064337
231 2643866006 2643221570 Bacteria 5103772
232 2643981120 2643221594 Bacteria 5811388
233 2643981662 2643221594 Bacteria 5811388
234 2643994004 2643221596 Bacteria 5006805
235 2644119790 2643221621 Bacteria 6212786
236 2644120947 2643221621 Bacteria 6212786
237 2644292818 2643221652 Bacteria 5140275
238 2809034988 2808606395 Bacteria 6020352
239 2809035570 2808606395 Bacteria 6020352
240 2857539153 2857537821 Bacteria 5248181
241 2857542970 2857542790 Bacteria 5326616
242 2857546188 2857542790 Bacteria 5326616
243 2858954459 2858950400 Bacteria 6783797
244 2858956007 2858950400 Bacteria 6783797
245 2928084569 2928084124 Bacteria 7159212
246 2929524236 2929520902 Bacteria 6765052
247 2941483802
248 2945972643 2945972063 Bacteria 6086495
249 2945985634 2945984333 Bacteria 7358892
250 2990714059 2990710928 Bacteria 5002431
251 Ga0496122_0048611
252 JGI25153J46596_10004149
253 rootL2_10003010
254 JGI25404J52841_10000997
255 Ga0070670_100226082
256 Ga0070677_10104434
257 Ga0070680_100007168
258 Ga0070680_100015027
259 Ga0070669_100189938
260 Ga0070671_100201413
261 Ga0070673_100128758
262 Ga0070688_100170835
263 Ga0070667_100316894
264 Ga0070714_100070428
265 Ga0070713_100117516
266 Ga0070700_100181554
267 Ga0070662_100176956
268 Ga0070697_100333573
269 Ga0070686_100043058
270 Ga0070664_100215248
271 Ga0068859_100118269
272 Ga0068864_100012357
273 Ga0068858_100004813
274 Ga0068860_100104519
275 Ga0081455_10002333
276 Ga0081540_1002942
277 Ga0081539_10000785
278 Ga0070717_10023790
279 Ga0070717_10351041
280 Ga0075365_10002166
281 Ga0075365_10043297
282 Ga0075365_10062512
283 Ga0075365_10066823
284 Ga0075368_10024973
285 Ga0075368_10037280
286 Ga0075363_100008874
287 Ga0075364_10075406
288 Ga0070716_100035012
289 Ga0075362_10075711
290 Ga0075366_10007144
291 Ga0075366_10051087
292 Ga0075366_10130496
293 Ga0075436_100180069
294 Ga0097620_100118268
295 Ga0075435_100303272
296 Ga0114129_10521006
297 Ga0105243_10065598
298 Ga0105248_10040399
299 Ga0105237_10157923
300 Ga0105249_10621206
301 Ga0105246_10100535
302 Ga0157370_10011918
303 Ga0163163_10004833
304 Ga0182008_10026405
305 Ga0163161_10002943
306 Ga0224572_1016793
307 Ga0209676_1007300
308 Ga0209758_1000074
309 Ga0209758_1002427
310 Ga0209050_1002122
311 Ga0207682_10132003
312 Ga0207642_10082296
313 Ga0207649_10079332
314 Ga0207649_10101169
315 Ga0207650_10426571
316 Ga0207700_10018360
317 Ga0207664_10020576
318 Ga0207644_10019642
319 Ga0207706_10065874
320 Ga0207706_10087286
321 Ga0207709_10068924
322 Ga0207709_10129864
323 Ga0207669_10053930
324 Ga0207669_10127196
325 Ga0207665_10007438
326 Ga0207711_10010491
327 Ga0207703_10004273
328 Ga0207703_10289157
329 Ga0207639_10153441
330 Ga0207708_10249694
331 Ga0207676_10019248
332 Ga0209813_10032133
333 Ga0268266_10140935
334 Ga0307517_10000392
335 Ga0307515_10000572
336 Ga0307515_10278013
337 Ga0307511_10000086
338 Ga0307512_10170450
339 Ga0265327_10065035
340 Ga0307513_10022141
341 Ga0307513_10121725
342 Ga0307513_10169802
343 Ga0307408_100037497
344 Ga0307514_10036740
345 Ga0265314_10019348
346 Ga0265342_10051057
347 Ga0307412_10005088
348 Ga0307412_10006316
349 Ga0307416_100240022
350 Ga0307507_10047722
351 Ga0307507_10124896
352 Ga0373946_0052468
353 Ga0373935_0033774
354 Ga0373927_0170676
355 Ga0373947_0060723
356 Ga0395900_0381917
357 Ga0395905_0000428
358 Ga0395905_0109665
359 Ga0395905_0190221
360 Ga0395901_0267312
361 Ga0436365_1368459
362 Ga0451577_0017632
363 Ga0453684_0229182
364 Ga0495592_0029803
365 Ga0495592_0094697
366 Ga0495606_0002467
367 Ga0495610_0065735
368 Ga0495616_0002525
369 Ga0495628_0030628
370 Ga0495630_0067916
371 Ga0495631_0001338
372 Ga0495637_0027656
373 Ga0495637_0040007
374 Ga0495663_0050621
375 Ga0495621_0084738
376 Ga0495633_0078325
377 Ga0495667_0235429
378 Ga0495656_0041947
379 Ga0495668_0081630
380 Ga0495634_0021586
381 Ga0495625_0017370
382 Ga0495588_0061410
383 Ga0495588_0079973
384 Ga0495671_0016187
385 Ga0495660_0050945
386 Ga0495674_0186406
387 Ga0495676_0009307
388 Ga0495685_024065
389 Ga0495684_0017213
390 Ga0495593_0003947
391 Ga0495602_0066364
392 Ga0495602_0214778
393 Ga0496101_0068170
394 Ga0496102_0194876
395 Ga0496104_0012511
396 Ga0496105_0010915
397 Ga0496108_0024568
398 Ga0496109_0095539
399 Ga0496111_0011944
400 Ga0496111_0195565
401 Ga0496113_0064524
402 Ga0496114_0029737
403 Ga0496116_0012926
404 Ga0496117_0015157
405 Ga0496118_0012559
406 Ga0496119_0013777
407 Ga0496119_0073958
408 Ga0496121_0001265
409 Ga0496121_0031344
410 Ga0496122_0000350
411 Ga0496122_0057885
412 Ga0496123_0000747
413 Ga0496123_0013575
414 Ga0496124_0000004
415 Ga0496124_0000085
416 Ga0496124_0028885
417 Ga0496124_0132676
418 Ga0496124_0141540
419 Ga0496125_0000105
420 Ga0496125_0027544
421 Ga0496125_0155321
422 Ga0501032_0015110
423 Ga0501033_0084730
424 Ga0501034_0009541
425 Ga0501036_0001361
426 Ga0501037_0005389
427 Ga0501038_0012526
428 Ga0501039_0014984
429 Ga0501043_0007883
430 Ga0501046_0017389
431 Ga0501048_0014681
432 Ga0501067_0000887
433 Ga0501069_0009438
434 Ga0501071_0032419
435 Ga0501072_0117862
436 Ga0501073_0004035
437 Ga0501074_0093551
438 Ga0501083_0146564
439 Ga0501035_0073843
440 Ga0501044_0004447
441 Ga0501044_0225262
442 Ga0501045_0002804
443 nmdc:mga03683_154573_c1
444 nmdc:mga03n38_128174_c1
445 nmdc:mga03n38_21660_c1
446 nmdc:mga0yw44_28790_c1
447 nmdc:mga0yw44_33855_c1
448 nmdc:mga0yw44_6057_c1
449 nmdc:mga0yw44_65098_c1
450 nmdc:mga0k408_2419_c1
451 nmdc:mga0k408_33721_c1
452 nmdc:mga04h51_9805_c1
453 nmdc:mga07m45_179979_c1
454 Ga0495601_0006858
455 Ga0500610_0000409
456 Ga0500610_0001385
457 Ga0495619_0013188
458 Ga0500646_0000193
459 Ga0500651_0000015
460 Ga0500641_0022105
461 Ga0500562_014274
462 Ga0500569_006403
463 Ga0500571_000008
464 Ga0500593_000327
465 Ga0500595_024996
466 Ga0500607_002118
467 Ga0500626_031117
468 Ga0500642_0098068
469 Ga0500559_0035101
470 Ga0500561_0026809
471 Ga0500568_0000620
472 Ga0500586_000393
473 Ga0500590_001784
474 Ga0500604_0003634
475 Ga0500627_0000151
476 Ga0500636_0005718
477 Ga0500637_0032523
478 2599904892
479 2599905082
480 2643860473
481 2643866006
482 2643981120
483 2643981662
484 2643994004
485 2644119790
486 2644120947
487 2644292818
488 2809034988
489 2809035570
490 2857539153
491 2857542970
492 2857546188
493 2858954459
494 2858956007
495 2928084569
496 2929524236
497 2941483802
498 2945972643
499 2945985634
500 2990714059

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

70

343

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.959 37 330
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.9546 39 327
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9504 35 330
7ndr-assembly1.cif.gz_E crystal structure of tphc in an open conformation 0.9499 38 327
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9496 37 330
ID Description Score Start End Superfamily
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9314 35 330 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9261 35 330 3.40.190.150
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9256 134 250 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9255 35 330 3.40.190.150
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9221 134 250 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A375FQQ0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9704 73 330
AF-A0A853GVT4-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9667 45 330
AF-A0A536SS29-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9659 44 330
AF-A0A2N4SUF0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9642 44 330
AF-A0A4V2UYF0-F1-model_v4 Tripartite-type tricarboxylate transporter receptor subunit TctC 0.963 56 328

Map