F360872

General Info

Members Datasets Scaffolds Average Seq Length
249 145 245 830

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100026215|Ga0307416_1000262152
Length 874
Sequence MQRLPKLTDSMESRYQPREIEEKWQKFWEENKSFQAAQEQGKPKYYVLEMFPYPSGRIHMGHVRNYSIGDVVARYKRMRGYNVLHPMGWDAFGLPAENAAIERGIHPGKWTQENILYMKAQLKRMGLSYDWSREIATCHPEYYRWNQWIFLQFYKRGLAYKKSSLVNWCPSCETVLANEQVIEGVCWRCESTVTQQELDQWFFRITEYAEELLQDLERLPGWPEKVLLMQRNWIGKSVGAEIIFPLVGRAETLKVFTTRPDTVFGATFISLAIEHPLALKLSQGLPQEDAVREFTDTIKQQKSTGRGSEEGEKEGIFTGAYCTNPFTGENIPIYLANFVLMEYGTGAVMAVPAHDQRDFEFARKYGLPIRVVIQPAGSVLRAEDLTEAYVDEGMMVNSGPFSGLSNIDGKEKIAEHLEKEGRGKKAVRYRLRDWGVSRQRYWGTPIPIIYCERCGVMPVPEDQLPVTLPIDVPFTGKGRSPLAASKNFTDVQCPQCGAAARRETDTMDTFVDSSWYYLRYASPRTVTAPFDAKQAEYWMAVDQYIGGVEHAVLHLLYARFFTKALRDVGLAKMDEPFTNLLTQGMVCKETYRCLEHNWLLPTELAGSEKDGWRCPHCTRPVEKGRVEKMSKSKKNIVDPEELVAAYGADTARLFTLFAAPPEKDLEWSDQGVEGASRFLTRLWRFVSQHREMLLVDDADLGQLNGAAELRDLRRMIHRTIKKVTDDIDGRFHFNTAIAAIMELFNALSIAASREGGRLAAPVIRTGMETIIQLLYPFVPHLMSELWQNINKSQPLDQIPWPEYSPEALEEEQLLIVLQVNGKVRGKMTVPADIQRDQVETDALAEPRVKAFIGGKKVQRIVYVPRRLVNIVLEG

Samples

Sample ID Description Type Environment
1 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
2 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
3 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
79 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.39
Metatranscriptomes 0
Isolates 1.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.8
Rhizosphere 95.98
Stem 0
Stem Tuber 0
Unclassified 3.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10000278 3300005290 Bacteria 23625
2 Ga0065712_10005845 3300005290 Bacteria 6805
3 Ga0065715_10000256 3300005293 Bacteria 30993
4 Ga0065707_10082482 3300005295 Bacteria 14604
5 Ga0070658_10043236 3300005327 Bacteria 3640
6 Ga0070670_100000121 3300005331 Bacteria 72344
7 Ga0070691_10002595 3300005341 Bacteria 8061
8 Ga0070661_100009296 3300005344 Bacteria 6799
9 Ga0070692_10000538 3300005345 Bacteria 11774
10 Ga0070669_100014266 3300005353 Bacteria 5653
11 Ga0070671_100009293 3300005355 Bacteria 7895
12 Ga0070703_10002256 3300005406 Bacteria 5600
13 Ga0070701_10003877 3300005438 Bacteria 5973
14 Ga0070711_100028557 3300005439 Bacteria 3672
15 Ga0070694_100001116 3300005444 Bacteria 15360
16 Ga0070694_100003971 3300005444 Bacteria 8848
17 Ga0070707_100046283 3300005468 Bacteria 4163
18 Ga0070698_100006796 3300005471 Bacteria 12401
19 Ga0070699_100003673 3300005518 Bacteria 13595
20 Ga0070699_100016729 3300005518 Bacteria 6298
21 Ga0070697_100004446 3300005536 Bacteria 10769
22 Ga0070672_100045648 3300005543 Bacteria 3391
23 Ga0070686_100044991 3300005544 Bacteria 2778
24 Ga0070696_100035860 3300005546 Bacteria 3416
25 Ga0070704_100002661 3300005549 Bacteria 10086
26 Ga0068855_100001679 3300005563 Bacteria 27705
27 Ga0068857_100009825 3300005577 Bacteria 8312
28 Ga0068854_100000008 3300005578 Bacteria 181750
29 Ga0068856_100013074 3300005614 Bacteria 8039
30 Ga0068856_100017609 3300005614 Bacteria 6924
31 Ga0068856_100020063 3300005614 Bacteria 6490
32 Ga0068859_100067201 3300005617 Bacteria 3619
33 Ga0068860_100069313 3300005843 Bacteria 3352
34 Ga0068862_100016122 3300005844 Bacteria 6216
35 Ga0081455_10043413 3300005937 Bacteria 3932
36 Ga0081540_1001468 3300005983 Bacteria 20353
37 Ga0081539_10029972 3300005985 Bacteria 3387
38 Ga0075428_100008933 3300006844 Bacteria 11121
39 Ga0075428_100104383 3300006844 Bacteria 3090
40 Ga0075430_100000241 3300006846 Bacteria 37749
41 Ga0075430_100006274 3300006846 Bacteria 10028
42 Ga0075430_100025584 3300006846 Bacteria 5023
43 Ga0075431_100000679 3300006847 Bacteria 29116
44 Ga0075431_100003244 3300006847 Bacteria 15753
45 Ga0075431_100006731 3300006847 Bacteria 11414
46 Ga0075431_100007498 3300006847 Bacteria 10862
47 Ga0075431_100008204 3300006847 Bacteria 10438
48 Ga0075433_10039604 3300006852 Bacteria 4076
49 Ga0075434_100007953 3300006871 Bacteria 9826
50 Ga0075429_100001769 3300006880 Bacteria 17891
51 Ga0075429_100010241 3300006880 Bacteria 8116
52 Ga0075429_100094852 3300006880 Bacteria 2602
53 Ga0097620_100067201 3300006931 Bacteria 3619
54 Ga0105240_10072242 3300009093 Bacteria 4265
55 Ga0111539_10015535 3300009094 Bacteria 9466
56 Ga0114129_10000120 3300009147 Bacteria 79454
57 Ga0114129_10000146 3300009147 Bacteria 74508
58 Ga0114129_10005144 3300009147 Bacteria 18410
59 Ga0114129_10005712 3300009147 Bacteria 17625
60 Ga0114129_10037168 3300009147 Bacteria 6875
61 Ga0114129_10056715 3300009147 Bacteria 5485
62 Ga0114129_10062130 3300009147 Bacteria 5219
63 Ga0114129_10068057 3300009147 Bacteria 4966
64 Ga0105242_10030845 3300009176 Bacteria 4282
65 Ga0105239_10014913 3300010375 Bacteria 8615
66 Ga0157373_10036953 3300013100 Bacteria 3504
67 Ga0157374_10000307 3300013296 Bacteria 45273
68 Ga0163162_10016480 3300013306 Bacteria 7219
69 Ga0157379_10000360 3300014968 Bacteria 36579
70 Ga0157376_10001145 3300014969 Bacteria 17405
71 Ga0213872_10009551 3300021361 Bacteria 4651
72 Ga0213874_10004494 3300021377 Bacteria 3191
73 Ga0213876_10002227 3300021384 Bacteria 11437
74 Ga0213875_10000227 3300021388 Bacteria 57383
75 Ga0207653_10005888 3300025885 Bacteria 3825
76 Ga0207645_10000797 3300025907 Bacteria 26413
77 Ga0207707_10005849 3300025912 Bacteria 10748
78 Ga0207657_10001731 3300025919 Bacteria 23521
79 Ga0207646_10000012 3300025922 Bacteria 367049
80 Ga0207646_10009322 3300025922 Bacteria 9709
81 Ga0207646_10042987 3300025922 Bacteria 4059
82 Ga0207664_10031046 3300025929 Bacteria 4084
83 Ga0207706_10001483 3300025933 Bacteria 23387
84 Ga0207667_10000203 3300025949 Bacteria 86134
85 Ga0207667_10004400 3300025949 Bacteria 17261
86 Ga0207640_10000008 3300025981 Bacteria 290578
87 Ga0207678_10030178 3300026067 Bacteria 4733
88 Ga0207678_10038066 3300026067 Bacteria 4181
89 Ga0207708_10015053 3300026075 Bacteria 5798
90 Ga0207702_10008920 3300026078 Bacteria 8454
91 Ga0207683_10002378 3300026121 Bacteria 16428
92 Ga0209966_1000048 3300027695 Bacteria 51459
93 Ga0209974_10000288 3300027876 Bacteria 16457
94 Ga0268265_10006451 3300028380 Bacteria 7954
95 Ga0265338_10000367 3300028800 Bacteria 80983
96 Ga0265325_10002810 3300031241 Bacteria 11618
97 Ga0265331_10023547 3300031250 Bacteria 3127
98 Ga0265327_10006035 3300031251 Bacteria 9830
99 Ga0265342_10005746 3300031712 Bacteria 9377
100 Ga0316576_10002231 3300031727 Bacteria 10951
101 Ga0316576_10010962 3300031727 Bacteria 5912
102 Ga0316578_10011497 3300031728 Bacteria 4635
103 Ga0307405_10023107 3300031731 Bacteria 3528
104 Ga0307409_100001849 3300031995 Bacteria 10761
105 Ga0307416_100026215 3300032002 Bacteria 4291
106 Ga0307416_100034201 3300032002 Bacteria 3865
107 Ga0373931_0011675 3300035691 Bacteria 4244
108 Ga0373935_0009696 3300035692 Bacteria 5764
109 Ga0373935_0017691 3300035692 Bacteria 4328
110 Ga0316584_0019286 3300036712 Bacteria 4930
111 Ga0316584_0039529 3300036712 Bacteria 3512
112 Ga0373925_0004994 3300037068 Bacteria 9958
113 Ga0436364_0446012 3300037853 Bacteria 193523
114 Ga0436364_0456011 3300037853 Bacteria 8675
115 Ga0436365_0581631 3300039437 Bacteria 9837
116 Ga0436360_0146389 3300039438 Bacteria 19091
117 Ga0436361_0080514 3300039447 Bacteria 9149
118 Ga0436361_0564619 3300039447 Bacteria 7477
119 Ga0436361_1153416 3300039447 Bacteria 6845
120 Ga0436361_1179410 3300039447 Bacteria 5951
121 Ga0451577_0000261 3300042876 Bacteria 104084
122 Ga0451577_0025969 3300042876 Bacteria 5308
123 Ga0453683_0000913 3300044673 Bacteria 28175
124 Ga0453683_0001581 3300044673 Bacteria 19270
125 Ga0453683_0002421 3300044673 Bacteria 14504
126 Ga0453683_0004969 3300044673 Bacteria 9344
127 Ga0466966_0034149 3300044684 Bacteria 3291
128 Ga0453684_0000397 3300044712 Bacteria 179262
129 Ga0453684_0000830 3300044712 Bacteria 104293
130 Ga0453684_0002556 3300044712 Bacteria 43728
131 Ga0453684_0004575 3300044712 Bacteria 28876
132 Ga0453684_0010986 3300044712 Bacteria 15304
133 Ga0453684_0016897 3300044712 Bacteria 11355
134 Ga0453684_0024649 3300044712 Bacteria 8778
135 Ga0453684_0031375 3300044712 Bacteria 7471
136 Ga0466959_0003951 3300045049 Bacteria 9849
137 Ga0466967_0000511 3300045976 Bacteria 18940
138 Ga0495629_0000174 3300046459 Bacteria 57286
139 Ga0495580_0000613 3300046472 Bacteria 30187
140 Ga0495634_0036183 3300046642 Bacteria 3377
141 Ga0495635_0003016 3300046663 Bacteria 11568
142 Ga0495647_0002352 3300046681 Bacteria 5938
143 Ga0495658_0000010 3300046683 Bacteria 108086
144 Ga0495613_0022028 3300046689 Bacteria 4750
145 Ga0495581_0003027 3300047315 Bacteria 9625
146 Ga0495672_0006866 3300047320 Bacteria 8687
147 Ga0495680_0000414 3300047322 Bacteria 47700
148 Ga0496112_0010328 3300048915 Bacteria 8467
149 Ga0496112_0015314 3300048915 Bacteria 7151
150 Ga0501033_0047856 3300049570 Bacteria 3178
151 Ga0501033_0056514 3300049570 Bacteria 2900
152 Ga0501034_0073973 3300049571 Bacteria 3416
153 Ga0501036_0000122 3300049572 Bacteria 48784
154 Ga0501036_0007376 3300049572 Bacteria 8959
155 Ga0501036_0009617 3300049572 Bacteria 7952
156 Ga0501038_0004225 3300049574 Bacteria 13345
157 Ga0501038_0013332 3300049574 Bacteria 7497
158 Ga0501039_0008224 3300049575 Bacteria 7952
159 Ga0501039_0027028 3300049575 Bacteria 4411
160 Ga0501040_0000379 3300049576 Bacteria 26179
161 Ga0501040_0000417 3300049576 Bacteria 25145
162 Ga0501040_0016798 3300049576 Bacteria 4852
163 Ga0501040_0017231 3300049576 Bacteria 4795
164 Ga0501041_0001121 3300049577 Bacteria 14690
165 Ga0501041_0004220 3300049577 Bacteria 8319
166 Ga0501041_0013347 3300049577 Bacteria 4868
167 Ga0501041_0026031 3300049577 Bacteria 3516
168 Ga0501042_0012583 3300049578 Bacteria 5736
169 Ga0501042_0026018 3300049578 Bacteria 4112
170 Ga0501042_0036200 3300049578 Bacteria 3501
171 Ga0501046_0019034 3300049580 Bacteria 5699
172 Ga0501046_0030369 3300049580 Bacteria 4385
173 Ga0501046_0036072 3300049580 Bacteria 3981
174 Ga0501047_0006499 3300049581 Bacteria 11003
175 Ga0501047_0055195 3300049581 Bacteria 3842
176 Ga0501048_0003991 3300049582 Bacteria 11204
177 Ga0501068_0018182 3300049584 Bacteria 4070
178 Ga0501069_0022350 3300049585 Bacteria 3440
179 Ga0501070_0017655 3300049586 Bacteria 5989
180 Ga0501071_0000016 3300049587 Bacteria 56789
181 Ga0501072_0000874 3300049588 Bacteria 22074
182 Ga0501072_0005767 3300049588 Bacteria 9425
183 Ga0501072_0007867 3300049588 Bacteria 8097
184 Ga0501072_0008319 3300049588 Bacteria 7880
185 Ga0501074_0006453 3300049590 Bacteria 8470
186 Ga0501075_0000774 3300049591 Bacteria 19960
187 Ga0501075_0003734 3300049591 Bacteria 10236
188 Ga0501075_0005037 3300049591 Bacteria 9021
189 Ga0501075_0020232 3300049591 Bacteria 4836
190 Ga0501076_0000617 3300049592 Bacteria 22782
191 Ga0501076_0003090 3300049592 Bacteria 11594
192 Ga0501076_0003101 3300049592 Bacteria 11572
193 Ga0501076_0016829 3300049592 Bacteria 5550
194 Ga0501077_0004769 3300049593 Bacteria 8241
195 Ga0501077_0021801 3300049593 Bacteria 4056
196 Ga0501079_0002256 3300049741 Bacteria 13905
197 Ga0501079_0011582 3300049741 Bacteria 6732
198 Ga0501080_0000372 3300049742 Bacteria 34540
199 Ga0501080_0001138 3300049742 Bacteria 21900
200 Ga0501080_0036769 3300049742 Bacteria 4571
201 Ga0501081_0000072 3300049743 Bacteria 39157
202 Ga0501081_0001623 3300049743 Bacteria 13893
203 Ga0501081_0002757 3300049743 Bacteria 11135
204 Ga0501081_0052997 3300049743 Bacteria 2800
205 Ga0501035_0051218 3300049822 Bacteria 3697
206 Ga0501044_0006630 3300049823 Bacteria 12768
207 Ga0501045_0001604 3300049824 Bacteria 15117
208 Ga0501045_0005243 3300049824 Bacteria 8966
209 nmdc:mga05p37_10386_c1 3300050507 Bacteria 11054
210 nmdc:mga05p37_11557_c2 3300050507 Bacteria 9248
211 nmdc:mga05p37_2008_c1 3300050507 Bacteria 23754
212 nmdc:mga05p37_3379_c1 3300050507 Bacteria 18626
213 nmdc:mga05p37_5853_c1 3300050507 Bacteria 14454
214 nmdc:mga05p37_7093_c1 3300050507 Bacteria 13215
215 nmdc:mga05p37_718_c1 3300050507 Bacteria 36658
216 nmdc:mga05p37_75296_c1 3300050507 Bacteria 4154
217 nmdc:mga05p37_88561_c1 3300050507 Bacteria 3815
218 nmdc:mga05p37_98680_c2 3300050507 Bacteria 3280
219 nmdc:mga09592_2713_c1 3300050508 Bacteria 14304
220 nmdc:mga09592_97939_c1 3300050508 Bacteria 2510
221 nmdc:mga06r32_11419_c1 3300050510 Bacteria 8001
222 nmdc:mga06r32_12785_c1 3300050510 Bacteria 7590
223 nmdc:mga06r32_1346_c1 3300050510 Bacteria 22176
224 nmdc:mga06r32_23632_c1 3300050510 Bacteria 5690
225 nmdc:mga06r32_50992_c1 3300050510 Bacteria 3960
226 nmdc:mga08y16_26144_c1 3300050511 Bacteria 6156
227 nmdc:mga08y16_69282_c1 3300050511 Bacteria 3677
228 nmdc:mga08y16_70647_c1 3300050511 Bacteria 3639
229 nmdc:mga0n895_18709_c1 3300050512 Bacteria 6418
230 nmdc:mga0n895_37781_c1 3300050512 Bacteria 4673
231 nmdc:mga0n895_41413_c1 3300050512 Bacteria 4478
232 nmdc:mga0n895_739_c1 3300050512 Bacteria 23101
233 nmdc:mga0rr50_19622_c1 3300050513 Bacteria 4569
234 nmdc:mga0a205_1119_c2 3300050515 Bacteria 21656
235 nmdc:mga0a205_29346_c2 3300050515 Bacteria 4100
236 nmdc:mga0a205_48526_c1 3300050515 Bacteria 4097
237 Ga0501084_0000660 3300054114 Bacteria 26279
238 Ga0501084_0001469 3300054114 Bacteria 18716
239 Ga0501084_0009625 3300054114 Bacteria 7993
240 Ga0501084_0031452 3300054114 Bacteria 4437
241 Ga0590075_001449 3300059424 Bacteria 5934
242 Ga0501082_0000834 3300060353 Bacteria 27112
243 Ga0501082_0003797 3300060353 Bacteria 13209
244 Ga0530510_0000010 3300061734 Bacteria 155647
245 Ga0530510_0029480 3300061734 Bacteria 3938

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0055195 Ga0501047_0055195_11_2173 693
2 3300027695 Ga0209966_1000048 Ga0209966_100004813 713
3 3300049577 Ga0501041_0026031 Ga0501041_0026031_1128_3491 730
4 3300046642 Ga0495634_0036183 Ga0495634_0036183_977_3328 735
5 3300021384 Ga0213876_10002227 Ga0213876_100022277 740
6 3300039437 Ga0436365_0581631 Ga0436365_0581631_2852_5176 740
7 3300009176 Ga0105242_10030845 Ga0105242_100308451 743
8 3300037853 Ga0436364_0456011 Ga0436364_0456011_2693_5017 746
9 3300021388 Ga0213875_10000227 Ga0213875_1000022737 747
10 3300036712 Ga0316584_0019286 Ga0316584_0019286_2387_4837 747
11 3300037853 Ga0436364_0446012 Ga0436364_0446012_44275_46599 747
12 3300049571 Ga0501034_0073973 Ga0501034_0073973_12_2339 748
13 3300049581 Ga0501047_0006499 Ga0501047_0006499_2418_4745 748
14 3300049586 Ga0501070_0017655 Ga0501070_0017655_1656_3983 748
15 3300049822 Ga0501035_0051218 Ga0501035_0051218_269_2596 748
16 3300049823 Ga0501044_0006630 Ga0501044_0006630_210_2537 748
17 3300005614 Ga0068856_100020063 Ga0068856_1000200634 749
18 3300039447 Ga0436361_1179410 Ga0436361_1179410_1150_3627 758
19 3300005985 Ga0081539_10029972 Ga0081539_100299722 769
20 3300049576 Ga0501040_0016798 Ga0501040_0016798_1577_4060 769
21 3300021377 Ga0213874_10004494 Ga0213874_100044942 770
22 3300044684 Ga0466966_0034149 Ga0466966_0034149_591_3095 771
23 3300045049 Ga0466959_0003951 Ga0466959_0003951_5708_8212 771
24 3300014968 Ga0157379_10000360 Ga0157379_1000036013 774
25 3300006844 Ga0075428_100104383 Ga0075428_1001043832 777
26 3300049580 Ga0501046_0036072 Ga0501046_0036072_190_2694 777
27 3300049588 Ga0501072_0008319 Ga0501072_0008319_5320_7824 777
28 3300049592 Ga0501076_0016829 Ga0501076_0016829_1245_3749 777
29 3300049743 Ga0501081_0052997 Ga0501081_0052997_73_2577 777
30 3300026067 Ga0207678_10030178 Ga0207678_100301782 778
31 3300050507 nmdc:mga05p37_88561_c1 nmdc:mga05p37_88561_c1_522_3005 778
32 3300006844 Ga0075428_100008933 Ga0075428_1000089334 779
33 3300049572 Ga0501036_0007376 Ga0501036_0007376_1514_4018 779
34 3300049574 Ga0501038_0013332 Ga0501038_0013332_4252_6756 779
35 3300049577 Ga0501041_0013347 Ga0501041_0013347_203_2707 779
36 3300049578 Ga0501042_0026018 Ga0501042_0026018_1246_3750 779
37 3300049580 Ga0501046_0019034 Ga0501046_0019034_2729_5233 779
38 3300049588 Ga0501072_0005767 Ga0501072_0005767_781_3285 779
39 3300049591 Ga0501075_0000774 Ga0501075_0000774_6214_8718 779
40 3300049592 Ga0501076_0000617 Ga0501076_0000617_11216_13720 779
41 3300054114 Ga0501084_0001469 Ga0501084_0001469_11175_13679 779
42 3300061734 Ga0530510_0000010 Ga0530510_0000010_23866_26370 779
43 3300006846 Ga0075430_100006274 Ga0075430_1000062748 780
44 3300006846 Ga0075430_100025584 Ga0075430_1000255844 780
45 3300006847 Ga0075431_100008204 Ga0075431_1000082046 780
46 3300006880 Ga0075429_100001769 Ga0075429_10000176913 780
47 3300006880 Ga0075429_100010241 Ga0075429_1000102415 780
48 3300009147 Ga0114129_10000120 Ga0114129_100001208 780
49 3300044712 Ga0453684_0010986 Ga0453684_0010986_9335_11830 780
50 3300050507 nmdc:mga05p37_3379_c1 nmdc:mga05p37_3379_c1_9297_11834 780
51 3300050508 nmdc:mga09592_2713_c1 nmdc:mga09592_2713_c1_1727_4210 780
52 3300050510 nmdc:mga06r32_12785_c1 nmdc:mga06r32_12785_c1_208_2691 780
53 3300054114 Ga0501084_0031452 Ga0501084_0031452_79_2562 780
54 3300005536 Ga0070697_100004446 Ga0070697_1000044465 781
55 3300005844 Ga0068862_100016122 Ga0068862_1000161224 781
56 3300025922 Ga0207646_10042987 Ga0207646_100429874 781
57 3300028380 Ga0268265_10006451 Ga0268265_100064515 781
58 3300035691 Ga0373931_0011675 Ga0373931_0011675_215_2692 781
59 3300050512 nmdc:mga0n895_18709_c1 nmdc:mga0n895_18709_c1_1875_4352 781
60 3300005341 Ga0070691_10002595 Ga0070691_100025955 782
61 3300005406 Ga0070703_10002256 Ga0070703_100022563 782
62 3300005438 Ga0070701_10003877 Ga0070701_100038775 782
63 3300005577 Ga0068857_100009825 Ga0068857_1000098256 782
64 3300013296 Ga0157374_10000307 Ga0157374_1000030717 782
65 3300025885 Ga0207653_10005888 Ga0207653_100058882 782
66 3300026075 Ga0207708_10015053 Ga0207708_100150533 782
67 3300044712 Ga0453684_0004575 Ga0453684_0004575_18832_21339 782
68 3300005444 Ga0070694_100003971 Ga0070694_1000039714 783
69 3300035692 Ga0373935_0009696 Ga0373935_0009696_2399_4921 783
70 3300037068 Ga0373925_0004994 Ga0373925_0004994_1119_3641 783
71 3300046472 Ga0495580_0000613 Ga0495580_0000613_15237_17759 783
72 3300031727 Ga0316576_10002231 Ga0316576_100022311 784
73 iso_pu_bacteria 3002998708 3003001070 784
74 iso_pu_bacteria 8053945823 8053950255 784
75 3300005471 Ga0070698_100006796 Ga0070698_1000067966 785
76 3300005518 Ga0070699_100003673 Ga0070699_1000036737 785
77 3300005563 Ga0068855_100001679 Ga0068855_10000167910 785
78 3300005578 Ga0068854_100000008 Ga0068854_10000000815 785
79 3300005614 Ga0068856_100017609 Ga0068856_1000176093 785
80 3300025922 Ga0207646_10009322 Ga0207646_100093221 785
81 3300025949 Ga0207667_10000203 Ga0207667_1000020375 785
82 3300025949 Ga0207667_10004400 Ga0207667_100044007 785
83 3300025981 Ga0207640_10000008 Ga0207640_10000008168 785
84 3300026078 Ga0207702_10008920 Ga0207702_100089203 785
85 3300028800 Ga0265338_10000367 Ga0265338_1000036759 785
86 3300031241 Ga0265325_10002810 Ga0265325_100028104 785
87 3300031712 Ga0265342_10005746 Ga0265342_100057465 785
88 3300049570 Ga0501033_0047856 Ga0501033_0047856_266_2770 785
89 3300049572 Ga0501036_0000122 Ga0501036_0000122_16828_19332 785
90 3300049575 Ga0501039_0027028 Ga0501039_0027028_377_2881 785
91 3300049576 Ga0501040_0000379 Ga0501040_0000379_879_3383 785
92 3300049577 Ga0501041_0001121 Ga0501041_0001121_11652_14156 785
93 3300049578 Ga0501042_0036200 Ga0501042_0036200_139_2643 785
94 3300049580 Ga0501046_0030369 Ga0501046_0030369_1726_4230 785
95 3300049582 Ga0501048_0003991 Ga0501048_0003991_1962_4466 785
96 3300049587 Ga0501071_0000016 Ga0501071_0000016_30565_33069 785
97 3300049588 Ga0501072_0007867 Ga0501072_0007867_1185_3689 785
98 3300049590 Ga0501074_0006453 Ga0501074_0006453_1558_4062 785
99 3300049591 Ga0501075_0020232 Ga0501075_0020232_674_3178 785
100 3300049592 Ga0501076_0003090 Ga0501076_0003090_5361_7865 785
101 3300049593 Ga0501077_0004769 Ga0501077_0004769_4975_7479 785
102 3300049741 Ga0501079_0002256 Ga0501079_0002256_6081_8585 785
103 3300049742 Ga0501080_0000372 Ga0501080_0000372_29412_31916 785
104 3300049743 Ga0501081_0000072 Ga0501081_0000072_25218_27722 785
105 3300049824 Ga0501045_0001604 Ga0501045_0001604_11302_13806 785
106 3300054114 Ga0501084_0000660 Ga0501084_0000660_19734_22238 785
107 3300060353 Ga0501082_0000834 Ga0501082_0000834_13596_16100 785
108 3300061734 Ga0530510_0029480 Ga0530510_0029480_1185_3689 785
109 3300005617 Ga0068859_100067201 Ga0068859_1000672012 786
110 3300006931 Ga0097620_100067201 Ga0097620_1000672012 786
111 3300021361 Ga0213872_10009551 Ga0213872_100095513 786
112 3300025929 Ga0207664_10031046 Ga0207664_100310462 786
113 3300039438 Ga0436360_0146389 Ga0436360_0146389_14043_16571 786
114 3300039447 Ga0436361_0080514 Ga0436361_0080514_5258_7741 786
115 3300039447 Ga0436361_0564619 Ga0436361_0564619_1103_3586 786
116 3300039447 Ga0436361_1153416 Ga0436361_1153416_1198_3672 786
117 3300042876 Ga0451577_0025969 Ga0451577_0025969_848_3319 786
118 3300044712 Ga0453684_0016897 Ga0453684_0016897_5792_8263 786
119 3300045976 Ga0466967_0000511 Ga0466967_0000511_200_2686 786
120 3300010375 Ga0105239_10014913 Ga0105239_100149134 787
121 3300031727 Ga0316576_10010962 Ga0316576_100109622 787
122 3300005983 Ga0081540_1001468 Ga0081540_100146816 788
123 iso_pu_bacteria 2857729791 2857730018 788
124 iso_pu_bacteria 2928121344 2928123243 788
125 3300005937 Ga0081455_10043413 Ga0081455_100434132 790
126 3300044712 Ga0453684_0031375 Ga0453684_0031375_1792_4266 791
127 3300047320 Ga0495672_0006866 Ga0495672_0006866_3575_6046 791
128 3300050511 nmdc:mga08y16_69282_c1 nmdc:mga08y16_69282_c1_103_2565 791
129 3300046459 Ga0495629_0000174 Ga0495629_0000174_12601_15063 792
130 3300046663 Ga0495635_0003016 Ga0495635_0003016_5561_8023 792
131 3300046683 Ga0495658_0000010 Ga0495658_0000010_101270_103732 792
132 3300046689 Ga0495613_0022028 Ga0495613_0022028_1114_3576 792
133 3300047315 Ga0495581_0003027 Ga0495581_0003027_2051_4513 792
134 3300047322 Ga0495680_0000414 Ga0495680_0000414_10705_13167 792
135 3300005544 Ga0070686_100044991 Ga0070686_1000449911 793
136 3300006880 Ga0075429_100094852 Ga0075429_1000948521 793
137 3300050508 nmdc:mga09592_97939_c1 nmdc:mga09592_97939_c1_27_2495 793
138 3300050512 nmdc:mga0n895_37781_c1 nmdc:mga0n895_37781_c1_1519_3996 793
139 3300044712 Ga0453684_0024649 Ga0453684_0024649_2280_4769 794
140 3300006847 Ga0075431_100000679 Ga0075431_10000067924 795
141 3300009147 Ga0114129_10000146 Ga0114129_1000014612 795
142 3300049742 Ga0501080_0036769 Ga0501080_0036769_881_3418 795
143 3300050507 nmdc:mga05p37_11557_c2 nmdc:mga05p37_11557_c2_3195_5678 795
144 3300050507 nmdc:mga05p37_718_c1 nmdc:mga05p37_718_c1_31914_34397 795
145 3300050510 nmdc:mga06r32_1346_c1 nmdc:mga06r32_1346_c1_2501_4984 795
146 3300006847 Ga0075431_100007498 Ga0075431_1000074987 796
147 3300014969 Ga0157376_10001145 Ga0157376_1000114510 796
148 3300046681 Ga0495647_0002352 Ga0495647_0002352_2214_4727 796
149 3300050507 nmdc:mga05p37_98680_c2 nmdc:mga05p37_98680_c2_495_2972 796
150 3300050510 nmdc:mga06r32_11419_c1 nmdc:mga06r32_11419_c1_1896_4379 796
151 3300006846 Ga0075430_100000241 Ga0075430_10000024121 797
152 3300044673 Ga0453683_0001581 Ga0453683_0001581_16747_19221 797
153 3300044673 Ga0453683_0002421 Ga0453683_0002421_4232_6733 797
154 3300005345 Ga0070692_10000538 Ga0070692_100005382 798
155 3300005444 Ga0070694_100001116 Ga0070694_1000011162 798
156 3300005549 Ga0070704_100002661 Ga0070704_1000026615 798
157 3300006847 Ga0075431_100006731 Ga0075431_1000067312 798
158 3300009147 Ga0114129_10005712 Ga0114129_100057126 798
159 3300050507 nmdc:mga05p37_2008_c1 nmdc:mga05p37_2008_c1_20676_23183 798
160 3300050510 nmdc:mga06r32_23632_c1 nmdc:mga06r32_23632_c1_2813_5320 798
161 3300005468 Ga0070707_100046283 Ga0070707_1000462832 799
162 3300005518 Ga0070699_100016729 Ga0070699_1000167294 799
163 3300025922 Ga0207646_10000012 Ga0207646_1000001273 799
164 3300044673 Ga0453683_0004969 Ga0453683_0004969_4773_7277 799
165 3300050515 nmdc:mga0a205_48526_c1 nmdc:mga0a205_48526_c1_68_2539 799
166 3300031250 Ga0265331_10023547 Ga0265331_100235472 800
167 3300044712 Ga0453684_0002556 Ga0453684_0002556_37790_40294 800
168 3300031728 Ga0316578_10011497 Ga0316578_100114973 801
169 3300036712 Ga0316584_0039529 Ga0316584_0039529_965_3448 801
170 3300042876 Ga0451577_0000261 Ga0451577_0000261_71155_73650 801
171 3300044712 Ga0453684_0000830 Ga0453684_0000830_30420_32915 801
172 3300044673 Ga0453683_0000913 Ga0453683_0000913_14549_17038 804
173 3300009147 Ga0114129_10005144 Ga0114129_100051447 810
174 3300050507 nmdc:mga05p37_7093_c1 nmdc:mga05p37_7093_c1_2915_5512 810
175 3300031251 Ga0265327_10006035 Ga0265327_100060357 817
176 3300044712 Ga0453684_0000397 Ga0453684_0000397_78438_81026 818
177 3300009147 Ga0114129_10068057 Ga0114129_100680572 826
178 3300050507 nmdc:mga05p37_5853_c1 nmdc:mga05p37_5853_c1_6209_8806 826
179 3300050515 nmdc:mga0a205_1119_c2 nmdc:mga0a205_1119_c2_4399_6996 826
180 3300009147 Ga0114129_10062130 Ga0114129_100621306 833
181 3300050507 nmdc:mga05p37_10386_c1 nmdc:mga05p37_10386_c1_41_2638 833
182 3300006871 Ga0075434_100007953 Ga0075434_1000079535 838
183 3300050512 nmdc:mga0n895_739_c1 nmdc:mga0n895_739_c1_1128_3716 838
184 3300050513 nmdc:mga0rr50_19622_c1 nmdc:mga0rr50_19622_c1_480_3068 838
185 3300059424 Ga0590075_001449 Ga0590075_001449_2292_4886 838
186 3300009147 Ga0114129_10037168 Ga0114129_100371682 839
187 3300025912 Ga0207707_10005849 Ga0207707_100058492 839
188 3300031731 Ga0307405_10023107 Ga0307405_100231072 839
189 3300031995 Ga0307409_100001849 Ga0307409_1000018496 839
190 3300032002 Ga0307416_100026215 Ga0307416_1000262152 839
191 3300032002 Ga0307416_100034201 Ga0307416_1000342013 839
192 3300049576 Ga0501040_0017231 Ga0501040_0017231_2020_4614 839
193 3300049585 Ga0501069_0022350 Ga0501069_0022350_351_2945 839
194 3300005290 Ga0065712_10000278 Ga0065712_1000027815 840
195 3300005290 Ga0065712_10005845 Ga0065712_100058453 840
196 3300005293 Ga0065715_10000256 Ga0065715_100002567 840
197 3300005295 Ga0065707_10082482 Ga0065707_1008248214 840
198 3300005327 Ga0070658_10043236 Ga0070658_100432363 840
199 3300005331 Ga0070670_100000121 Ga0070670_10000012130 840
200 3300005344 Ga0070661_100009296 Ga0070661_1000092965 840
201 3300005353 Ga0070669_100014266 Ga0070669_1000142663 840
202 3300005355 Ga0070671_100009293 Ga0070671_1000092933 840
203 3300005439 Ga0070711_100028557 Ga0070711_1000285573 840
204 3300005543 Ga0070672_100045648 Ga0070672_1000456481 840
205 3300005546 Ga0070696_100035860 Ga0070696_1000358603 840
206 3300005614 Ga0068856_100013074 Ga0068856_1000130743 840
207 3300005843 Ga0068860_100069313 Ga0068860_1000693132 840
208 3300006847 Ga0075431_100003244 Ga0075431_1000032446 840
209 3300006852 Ga0075433_10039604 Ga0075433_100396042 840
210 3300009093 Ga0105240_10072242 Ga0105240_100722422 840
211 3300009094 Ga0111539_10015535 Ga0111539_100155358 840
212 3300009147 Ga0114129_10056715 Ga0114129_100567154 840
213 3300013100 Ga0157373_10036953 Ga0157373_100369532 840
214 3300013306 Ga0163162_10016480 Ga0163162_100164802 840
215 3300025907 Ga0207645_10000797 Ga0207645_1000079722 840
216 3300025919 Ga0207657_10001731 Ga0207657_1000173119 840
217 3300025933 Ga0207706_10001483 Ga0207706_1000148319 840
218 3300026067 Ga0207678_10038066 Ga0207678_100380663 840
219 3300026121 Ga0207683_10002378 Ga0207683_100023788 840
220 3300027876 Ga0209974_10000288 Ga0209974_1000028815 840
221 3300035692 Ga0373935_0017691 Ga0373935_0017691_1386_3983 840
222 3300048915 Ga0496112_0010328 Ga0496112_0010328_162_2756 840
223 3300048915 Ga0496112_0015314 Ga0496112_0015314_318_2906 840
224 3300049570 Ga0501033_0056514 Ga0501033_0056514_186_2783 840
225 3300049572 Ga0501036_0009617 Ga0501036_0009617_5241_7838 840
226 3300049574 Ga0501038_0004225 Ga0501038_0004225_8070_10667 840
227 3300049575 Ga0501039_0008224 Ga0501039_0008224_5100_7697 840
228 3300049576 Ga0501040_0000417 Ga0501040_0000417_18790_21387 840
229 3300049577 Ga0501041_0004220 Ga0501041_0004220_220_2817 840
230 3300049578 Ga0501042_0012583 Ga0501042_0012583_2904_5501 840
231 3300049584 Ga0501068_0018182 Ga0501068_0018182_240_2837 840
232 3300049588 Ga0501072_0000874 Ga0501072_0000874_10565_13162 840
233 3300049591 Ga0501075_0003734 Ga0501075_0003734_113_2710 840
234 3300049591 Ga0501075_0005037 Ga0501075_0005037_1221_3818 840
235 3300049592 Ga0501076_0003101 Ga0501076_0003101_3973_6570 840
236 3300049593 Ga0501077_0021801 Ga0501077_0021801_1204_3801 840
237 3300049741 Ga0501079_0011582 Ga0501079_0011582_246_2843 840
238 3300049742 Ga0501080_0001138 Ga0501080_0001138_13628_16225 840
239 3300049743 Ga0501081_0001623 Ga0501081_0001623_4293_6890 840
240 3300049743 Ga0501081_0002757 Ga0501081_0002757_154_2751 840
241 3300049824 Ga0501045_0005243 Ga0501045_0005243_289_2886 840
242 3300050507 nmdc:mga05p37_75296_c1 nmdc:mga05p37_75296_c1_853_3447 840
243 3300050510 nmdc:mga06r32_50992_c1 nmdc:mga06r32_50992_c1_789_3401 840
244 3300050511 nmdc:mga08y16_26144_c1 nmdc:mga08y16_26144_c1_2595_5192 840
245 3300050511 nmdc:mga08y16_70647_c1 nmdc:mga08y16_70647_c1_435_3023 840
246 3300050512 nmdc:mga0n895_41413_c1 nmdc:mga0n895_41413_c1_1673_4267 840
247 3300050515 nmdc:mga0a205_29346_c2 nmdc:mga0a205_29346_c2_1294_3891 840
248 3300054114 Ga0501084_0009625 Ga0501084_0009625_155_2752 840
249 3300060353 Ga0501082_0003797 Ga0501082_0003797_4700_7297 840

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

231

418

0.98

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

45

200

0.92

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

23

237

0.87

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

616

668

0.87

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

710

840

0.87

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

410

594

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ziu-assembly2.cif.gz_B crystal structure of mycoplasma mobile leucyl-trna synthetase with leu-ams in the active site 0.8731 4 775
3ziu-assembly2.cif.gz_B crystal structure of mycoplasma mobile leucyl-trna synthetase with leu-ams in the active site 0.8599 4 775
4k48-assembly1.cif.gz_A structure of the streptococcus pneumoniae leucyl-trna synthetase editing domain 0.8462 228 396
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.8326 229 364
2aji-assembly2.cif.gz_B crystal structure of the editing domain of e. coli leucyl-trna synthetase complexes with isoleucine 0.8179 229 396
ID Description Score Start End Superfamily
af_Q54ET5_379_608_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.978 408 553 3.40.50.620
af_Q2FXH2_743_805_3.10.20.590 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9724 777 839 3.10.20.590
af_P11325_419_606_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9592 408 553 3.40.50.620
af_Q2FXH2_743_805_3.10.20.590 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9577 777 839 3.10.20.590
3zjtA05 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9544 779 839 3.10.20.590
ID Description Score Start End GO Terms
AF-A0A5C8BSK8-F1-model_v4 deleted 0.9916 5 130
AF-A0A3D5EM55-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) 0.9851 1 141 GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A7V8DEC9-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) 0.9844 4 126 GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A2P8WBG7-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) 0.9786 1 133 GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A2D6QME9-F1-model_v4 deleted 0.9783 1 202

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pLDDT pTM Quality
81.24 0.72 High
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Predicted Structure (AlphaFold2)

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