F360756
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 249 | 137 | 498 | 409 |
Family's Representative Sequence
| Representative Sequence | 3300013307|Ga0157372_10323880|Ga0157372_103238802 |
| Length | 455 |
| Sequence | LIPHKVHSIFSDDFRLTLISLGNSSKYDNSPYWTIPTLNLLLFETMRILYINHYAGSPRYGMEYRPYYLAREWVRMGNDVHIIGSSQSHIRSRQPQLAGQHRLDETIDGVQYTWFQTPKYSGNGIGRVRNMASFVSRLCFESKRIATSFNPDVVIASSTYPMDIWPAHRIAKMAGAKLVFEIHDLWPLTPMELGGMSRWHPFIMVLQAAEDDAYRHADTIASMLPKVHDYVESRGASRARLHIVPNGVDPCEWAAGGAELQPNVEVTLSAIRDAGNFVIGYAGTHGVSNSLHTLLDAAALMRDEKVAFVLVGGGPEKTGLQRRAQLEQSQNVHFIDLIAKEQIPALLRRFDIAYIGWQRQSLYRFGIAPNKLMDYMMAARPVLHAVEAGNDPVGEAGCGLTVAPENPAVVAQGIRNLLALSPADRQAMGLRGKRFVMNNHTYPILSERFLAACCS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 2 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 3 | 3300003574 | Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 4 | 3300003575 | Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 5 | 3300003577 | Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Rhizosphere |
| 6 | 3300003693 | Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 13 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 14 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 15 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 16 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 17 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 22 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 23 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 24 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 30 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 31 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 32 | 3300030736 | Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 | Metagenome | Rhizosphere |
| 33 | 3300030745 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 | Metagenome | Rhizosphere |
| 34 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 35 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 36 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 37 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 38 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 39 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 40 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 41 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 42 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 43 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 44 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 45 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 46 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 47 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 48 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 49 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 50 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 51 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 52 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 53 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 54 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 55 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 114 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 115 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 116 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 117 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 118 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 119 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 120 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 121 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 124 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 125 | 3300049682 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought | Metagenome | Rhizosphere |
| 126 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 2547132103 | Chromobacterium sp. C-61 | Isolate | Rhizosphere |
| 128 | 2643221544 | Pelomonas sp. Root1444 | Isolate | Unclassified |
| 129 | 2643221556 | Massilia sp. Root1485 | Isolate | Unclassified |
| 130 | 2643221684 | Massilia sp. Root133 | Isolate | Unclassified |
| 131 | 2843690924 | Chromobacterium rhizoryzae JP2-74 | Isolate | Rhizosphere |
| 132 | 2846033681 | Chromobacterium sinusclupearum MWU13-2610 | Isolate | Rhizosphere |
| 133 | 2846037992 | Chromobacterium alticapitis MWU14-2602 | Isolate | Rhizosphere |
| 134 | 2857553236 | Duganella sp. R-74557 | Isolate | Unclassified |
| 135 | 2919476304 | Duganella sp. 3397 | Isolate | Unclassified |
| 136 | 2998344455 | Vogesella urethralis SLBN-145 | Isolate | Rhizosphere |
| 137 | 8047673197 | Telluria mixta LMG 11547 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.98 |
| Metatranscriptomes | 1.61 |
| Isolates | 4.42 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0.8 |
| Rhizoplane | 3.21 |
| Rhizosphere | 90.76 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.02 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0157372_10323880 | 3300013307 | Bacteria | 1794 |
| 2 | rootL2_10008121 | 3300003322 | Bacteria | 27005 |
| 3 | rootL2_10023350 | 3300003322 | Bacteria | 20853 |
| 4 | Ga0007410J51695_1051508 | 3300003574 | Bacteria | 3919 |
| 5 | Ga0007409J51694_1010661 | 3300003575 | Bacteria | 7598 |
| 6 | Ga0007416J51690_1008758 | 3300003577 | Bacteria | 11267 |
| 7 | Ga0032354_1014295 | 3300003693 | Bacteria | 10928 |
| 8 | Ga0070658_10014967 | 3300005327 | Bacteria | 6209 |
| 9 | Ga0070659_100008224 | 3300005366 | Bacteria | 7618 |
| 10 | Ga0070707_100164770 | 3300005468 | Unclassified | 2160 |
| 11 | Ga0070699_100006305 | 3300005518 | Bacteria | 10347 |
| 12 | Ga0070665_100172121 | 3300005548 | Bacteria | 2166 |
| 13 | Ga0068855_100029331 | 3300005563 | Bacteria | 6579 |
| 14 | Ga0068852_100045428 | 3300005616 | Bacteria | 3736 |
| 15 | Ga0068860_100119314 | 3300005843 | Bacteria | 2525 |
| 16 | Ga0075434_100185119 | 3300006871 | Unclassified | 2103 |
| 17 | Ga0079104_1005913 | 3300006946 | Bacteria | 4755 |
| 18 | Ga0105244_10058737 | 3300009036 | Bacteria | 1940 |
| 19 | Ga0114129_10172023 | 3300009147 | Unclassified | 2952 |
| 20 | Ga0105241_10009473 | 3300009174 | Bacteria | 7155 |
| 21 | Ga0105242_10001583 | 3300009176 | Bacteria | 17891 |
| 22 | Ga0157372_10021117 | 3300013307 | Bacteria | 7032 |
| 23 | Ga0182006_1000029 | 3300015261 | Bacteria | 247579 |
| 24 | Ga0182005_1000012 | 3300015265 | Bacteria | 396944 |
| 25 | Ga0213872_10000978 | 3300021361 | Bacteria | 19957 |
| 26 | Ga0213872_10044165 | 3300021361 | Bacteria | 2029 |
| 27 | Ga0207705_10008062 | 3300025909 | Bacteria | 7721 |
| 28 | Ga0207657_10002528 | 3300025919 | Bacteria | 19794 |
| 29 | Ga0207686_10011808 | 3300025934 | Bacteria | 4791 |
| 30 | Ga0207667_10001620 | 3300025949 | Bacteria | 28303 |
| 31 | Ga0207698_10048550 | 3300026142 | Bacteria | 3224 |
| 32 | Ga0209281_1003031 | 3300027111 | Bacteria | 5925 |
| 33 | Ga0307515_10000180 | 3300028794 | Bacteria | 156173 |
| 34 | Ga0316177_1110341 | 3300030731 | Bacteria | 6844 |
| 35 | Ga0316180_1134049 | 3300030736 | Bacteria | 12015 |
| 36 | Ga0316182_1348082 | 3300030745 | Bacteria | 2497 |
| 37 | Ga0316182_1424482 | 3300030745 | Bacteria | 2040 |
| 38 | Ga0307513_10033801 | 3300031456 | Bacteria | 5744 |
| 39 | Ga0373928_0005504 | 3300035084 | Bacteria | 2422 |
| 40 | Ga0373932_0004235 | 3300035112 | Bacteria | 3407 |
| 41 | Ga0395899_0000725 | 3300037312 | Bacteria | 32983 |
| 42 | Ga0395899_0002451 | 3300037312 | Bacteria | 15073 |
| 43 | Ga0395899_0143024 | 3300037312 | Bacteria | 1701 |
| 44 | Ga0395900_0006909 | 3300037418 | Bacteria | 11776 |
| 45 | Ga0395900_0030011 | 3300037418 | Bacteria | 5580 |
| 46 | Ga0395900_0145858 | 3300037418 | Bacteria | 2420 |
| 47 | Ga0395905_0003380 | 3300037471 | Bacteria | 17096 |
| 48 | Ga0395905_0096040 | 3300037471 | Bacteria | 2782 |
| 49 | Ga0395901_0144634 | 3300038443 | Bacteria | 2499 |
| 50 | Ga0436361_0401959 | 3300039447 | Bacteria | 5011 |
| 51 | Ga0436361_0428529 | 3300039447 | Bacteria | 5123 |
| 52 | Ga0436361_0563588 | 3300039447 | Bacteria | 97448 |
| 53 | Ga0451577_0006484 | 3300042876 | Bacteria | 11657 |
| 54 | Ga0466969_0000978 | 3300044656 | Bacteria | 15403 |
| 55 | Ga0466972_0121392 | 3300044658 | Bacteria | 1232 |
| 56 | Ga0453683_0026710 | 3300044673 | Bacteria | 3665 |
| 57 | Ga0466965_0024043 | 3300044683 | Bacteria | 2946 |
| 58 | Ga0466966_0024738 | 3300044684 | Bacteria | 3928 |
| 59 | Ga0466966_0047142 | 3300044684 | Bacteria | 2749 |
| 60 | Ga0466961_0069440 | 3300044693 | Bacteria | 2236 |
| 61 | Ga0466961_0191195 | 3300044693 | Bacteria | 1268 |
| 62 | Ga0466963_0167330 | 3300044694 | Bacteria | 1532 |
| 63 | Ga0453684_0032854 | 3300044712 | Bacteria | 7248 |
| 64 | Ga0466957_0082573 | 3300044842 | Bacteria | 2003 |
| 65 | Ga0466959_0003388 | 3300045049 | Bacteria | 10416 |
| 66 | Ga0466959_0121836 | 3300045049 | Bacteria | 1853 |
| 67 | Ga0466967_0027375 | 3300045976 | Bacteria | 4741 |
| 68 | Ga0495627_000007 | 3300046453 | Bacteria | 575915 |
| 69 | Ga0495627_000255 | 3300046453 | Bacteria | 54602 |
| 70 | Ga0495629_0007659 | 3300046459 | Bacteria | 7950 |
| 71 | Ga0495629_0039293 | 3300046459 | Bacteria | 3330 |
| 72 | Ga0495650_0018047 | 3300046471 | Bacteria | 3519 |
| 73 | Ga0495582_0006022 | 3300046473 | Bacteria | 6760 |
| 74 | Ga0495605_0000024 | 3300046474 | Bacteria | 236016 |
| 75 | Ga0495605_0000236 | 3300046474 | Bacteria | 67212 |
| 76 | Ga0495605_0030663 | 3300046474 | Bacteria | 2755 |
| 77 | Ga0495584_0018274 | 3300046491 | Bacteria | 3564 |
| 78 | Ga0495584_0025761 | 3300046491 | Bacteria | 2981 |
| 79 | Ga0495585_0000699 | 3300046492 | Bacteria | 30438 |
| 80 | Ga0495585_0004781 | 3300046492 | Bacteria | 8714 |
| 81 | Ga0495594_0002110 | 3300046499 | Bacteria | 10356 |
| 82 | Ga0495596_0003350 | 3300046500 | Bacteria | 8145 |
| 83 | Ga0495596_0013245 | 3300046500 | Bacteria | 3505 |
| 84 | Ga0495607_0002598 | 3300046501 | Bacteria | 14524 |
| 85 | Ga0495607_0004489 | 3300046501 | Bacteria | 10240 |
| 86 | Ga0495607_0005828 | 3300046501 | Bacteria | 8763 |
| 87 | Ga0495607_0006249 | 3300046501 | Bacteria | 8402 |
| 88 | Ga0495583_0001721 | 3300046506 | Bacteria | 21012 |
| 89 | Ga0495583_0015638 | 3300046506 | Bacteria | 4116 |
| 90 | Ga0495583_0027107 | 3300046506 | Bacteria | 2830 |
| 91 | Ga0495606_0003596 | 3300046507 | Bacteria | 16329 |
| 92 | Ga0495606_0004700 | 3300046507 | Bacteria | 13482 |
| 93 | Ga0495616_0000567 | 3300046513 | Bacteria | 27995 |
| 94 | Ga0495616_0002830 | 3300046513 | Bacteria | 11322 |
| 95 | Ga0495616_0005264 | 3300046513 | Bacteria | 7982 |
| 96 | Ga0495631_0006699 | 3300046518 | Bacteria | 5915 |
| 97 | Ga0495631_0010465 | 3300046518 | Bacteria | 4586 |
| 98 | Ga0495631_0023513 | 3300046518 | Unclassified | 2855 |
| 99 | Ga0495631_0028165 | 3300046518 | Bacteria | 2564 |
| 100 | Ga0495631_0055008 | 3300046518 | Bacteria | 1734 |
| 101 | Ga0495632_0000203 | 3300046519 | Bacteria | 60607 |
| 102 | Ga0495643_0001166 | 3300046522 | Bacteria | 25657 |
| 103 | Ga0495643_0004586 | 3300046522 | Bacteria | 9620 |
| 104 | Ga0495643_0006608 | 3300046522 | Bacteria | 7618 |
| 105 | Ga0495644_0003515 | 3300046523 | Bacteria | 6198 |
| 106 | Ga0495644_0005589 | 3300046523 | Bacteria | 4905 |
| 107 | Ga0495644_0017548 | 3300046523 | Bacteria | 2736 |
| 108 | Ga0495644_0029246 | 3300046523 | Bacteria | 2082 |
| 109 | Ga0495648_0000290 | 3300046524 | Bacteria | 57025 |
| 110 | Ga0495648_0005983 | 3300046524 | Bacteria | 9999 |
| 111 | Ga0495648_0057774 | 3300046524 | Unclassified | 2324 |
| 112 | Ga0495648_0059879 | 3300046524 | Bacteria | 2269 |
| 113 | Ga0495648_0105094 | 3300046524 | Bacteria | 1549 |
| 114 | Ga0495666_0000736 | 3300046526 | Bacteria | 15031 |
| 115 | Ga0495666_0000824 | 3300046526 | Bacteria | 14342 |
| 116 | Ga0495666_0012050 | 3300046526 | Bacteria | 4315 |
| 117 | Ga0495666_0040991 | 3300046526 | Bacteria | 2243 |
| 118 | Ga0495642_0000550 | 3300046528 | Bacteria | 18877 |
| 119 | Ga0495642_0001516 | 3300046528 | Bacteria | 10321 |
| 120 | Ga0495642_0007889 | 3300046528 | Bacteria | 4078 |
| 121 | Ga0495642_0044079 | 3300046528 | Unclassified | 1820 |
| 122 | Ga0495652_0020211 | 3300046529 | Bacteria | 5919 |
| 123 | Ga0495654_0023258 | 3300046530 | Bacteria | 3210 |
| 124 | Ga0495654_0025081 | 3300046530 | Bacteria | 3074 |
| 125 | Ga0495654_0053967 | 3300046530 | Unclassified | 1951 |
| 126 | Ga0495665_0066163 | 3300046531 | Bacteria | 1907 |
| 127 | Ga0495665_0117294 | 3300046531 | Bacteria | 1394 |
| 128 | Ga0495586_0003616 | 3300046535 | Bacteria | 8284 |
| 129 | Ga0495586_0014525 | 3300046535 | Bacteria | 4183 |
| 130 | Ga0495586_0022089 | 3300046535 | Bacteria | 3395 |
| 131 | Ga0495609_0000554 | 3300046538 | Bacteria | 29545 |
| 132 | Ga0495609_0002030 | 3300046538 | Bacteria | 12756 |
| 133 | Ga0495609_0008055 | 3300046538 | Bacteria | 5195 |
| 134 | Ga0495597_0000219 | 3300046542 | Bacteria | 52473 |
| 135 | Ga0495597_0002570 | 3300046542 | Bacteria | 11347 |
| 136 | Ga0495597_0004754 | 3300046542 | Bacteria | 7347 |
| 137 | Ga0495597_0012237 | 3300046542 | Bacteria | 4145 |
| 138 | Ga0495622_0003018 | 3300046557 | Bacteria | 7982 |
| 139 | Ga0495622_0004162 | 3300046557 | Bacteria | 6749 |
| 140 | Ga0495622_0049315 | 3300046557 | Bacteria | 1954 |
| 141 | Ga0495633_0002490 | 3300046558 | Bacteria | 12982 |
| 142 | Ga0495633_0013352 | 3300046558 | Bacteria | 4332 |
| 143 | Ga0495633_0024643 | 3300046558 | Bacteria | 2970 |
| 144 | Ga0495633_0034679 | 3300046558 | Bacteria | 2425 |
| 145 | Ga0495633_0059154 | 3300046558 | Bacteria | 1798 |
| 146 | Ga0495656_0000016 | 3300046615 | Bacteria | 122424 |
| 147 | Ga0495668_0001547 | 3300046616 | Bacteria | 21809 |
| 148 | Ga0495668_0001603 | 3300046616 | Bacteria | 21205 |
| 149 | Ga0495668_0049663 | 3300046616 | Bacteria | 2326 |
| 150 | Ga0495611_0005643 | 3300046648 | Bacteria | 5337 |
| 151 | Ga0495611_0063896 | 3300046648 | Bacteria | 1676 |
| 152 | Ga0495625_0013638 | 3300046660 | Bacteria | 6520 |
| 153 | Ga0495625_0026677 | 3300046660 | Bacteria | 4361 |
| 154 | Ga0495625_0036332 | 3300046660 | Bacteria | 3622 |
| 155 | Ga0495625_0078260 | 3300046660 | Bacteria | 2308 |
| 156 | Ga0495659_0000027 | 3300046664 | Bacteria | 68298 |
| 157 | Ga0495659_0008004 | 3300046664 | Bacteria | 3354 |
| 158 | Ga0495661_0000882 | 3300046665 | Bacteria | 27670 |
| 159 | Ga0495661_0000956 | 3300046665 | Bacteria | 26186 |
| 160 | Ga0495661_0002000 | 3300046665 | Bacteria | 16087 |
| 161 | Ga0495661_0019651 | 3300046665 | Bacteria | 4423 |
| 162 | Ga0495661_0020417 | 3300046665 | Bacteria | 4323 |
| 163 | Ga0495661_0023851 | 3300046665 | Bacteria | 3965 |
| 164 | Ga0495661_0085880 | 3300046665 | Bacteria | 1802 |
| 165 | Ga0495661_0115268 | 3300046665 | Bacteria | 1492 |
| 166 | Ga0495588_0006180 | 3300046674 | Bacteria | 5379 |
| 167 | Ga0495588_0016096 | 3300046674 | Bacteria | 3609 |
| 168 | Ga0495588_0088722 | 3300046674 | Unclassified | 1619 |
| 169 | Ga0495646_0048221 | 3300046680 | Bacteria | 2589 |
| 170 | Ga0495613_0072338 | 3300046689 | Bacteria | 2513 |
| 171 | Ga0495613_0198548 | 3300046689 | Bacteria | 1415 |
| 172 | Ga0495624_0010731 | 3300046690 | Bacteria | 6312 |
| 173 | Ga0495670_0000317 | 3300046691 | Bacteria | 22950 |
| 174 | Ga0495670_0000845 | 3300046691 | Bacteria | 14804 |
| 175 | Ga0495670_0027638 | 3300046691 | Bacteria | 2812 |
| 176 | Ga0495671_0000812 | 3300046692 | Bacteria | 22323 |
| 177 | Ga0495671_0023499 | 3300046692 | Bacteria | 3220 |
| 178 | Ga0495649_0034084 | 3300046694 | Bacteria | 2802 |
| 179 | Ga0495589_0000598 | 3300046794 | Bacteria | 24527 |
| 180 | Ga0495589_0005703 | 3300046794 | Bacteria | 6563 |
| 181 | Ga0495660_0000173 | 3300046810 | Bacteria | 69912 |
| 182 | Ga0495660_0000285 | 3300046810 | Bacteria | 47026 |
| 183 | Ga0495660_0001243 | 3300046810 | Bacteria | 17732 |
| 184 | Ga0495660_0008898 | 3300046810 | Bacteria | 5867 |
| 185 | Ga0495660_0043680 | 3300046810 | Bacteria | 2470 |
| 186 | Ga0495581_0001884 | 3300047315 | Bacteria | 11734 |
| 187 | Ga0495581_0005692 | 3300047315 | Bacteria | 7226 |
| 188 | Ga0495581_0076409 | 3300047315 | Bacteria | 1937 |
| 189 | Ga0495604_0115174 | 3300047317 | Bacteria | 1954 |
| 190 | Ga0495636_0023567 | 3300047318 | Bacteria | 2492 |
| 191 | Ga0495674_0048064 | 3300047319 | Bacteria | 3778 |
| 192 | Ga0495672_0002856 | 3300047320 | Bacteria | 15354 |
| 193 | Ga0495672_0012364 | 3300047320 | Bacteria | 5959 |
| 194 | Ga0495676_0000100 | 3300047321 | Bacteria | 65339 |
| 195 | Ga0495676_0056625 | 3300047321 | Bacteria | 3099 |
| 196 | Ga0495680_0009597 | 3300047322 | Bacteria | 8691 |
| 197 | Ga0495683_0012564 | 3300047323 | Bacteria | 4446 |
| 198 | Ga0495683_0025800 | 3300047323 | Bacteria | 3010 |
| 199 | Ga0495683_0056506 | 3300047323 | Unclassified | 1952 |
| 200 | Ga0495687_000012 | 3300047443 | Bacteria | 391586 |
| 201 | Ga0495687_000279 | 3300047443 | Bacteria | 67230 |
| 202 | Ga0495687_050489 | 3300047443 | Bacteria | 1772 |
| 203 | Ga0495675_0012826 | 3300047444 | Bacteria | 5280 |
| 204 | Ga0495677_0000514 | 3300047445 | Bacteria | 16255 |
| 205 | Ga0495677_0010667 | 3300047445 | Bacteria | 3366 |
| 206 | Ga0495677_0014801 | 3300047445 | Bacteria | 2837 |
| 207 | Ga0495677_0016666 | 3300047445 | Bacteria | 2666 |
| 208 | Ga0495681_0000146 | 3300047470 | Bacteria | 59891 |
| 209 | Ga0495681_0000251 | 3300047470 | Bacteria | 43835 |
| 210 | Ga0495681_0015251 | 3300047470 | Bacteria | 4354 |
| 211 | Ga0495681_0040130 | 3300047470 | Bacteria | 2281 |
| 212 | Ga0495593_0010799 | 3300047673 | Bacteria | 5264 |
| 213 | Ga0495593_0015877 | 3300047673 | Bacteria | 4254 |
| 214 | Ga0495602_0027391 | 3300048088 | Bacteria | 5476 |
| 215 | Ga0495614_0002132 | 3300048089 | Bacteria | 8759 |
| 216 | Ga0495614_0050511 | 3300048089 | Bacteria | 1781 |
| 217 | Ga0495626_0000038 | 3300048091 | Bacteria | 175936 |
| 218 | Ga0495626_0000386 | 3300048091 | Bacteria | 45608 |
| 219 | Ga0496102_0000343 | 3300048905 | Bacteria | 56826 |
| 220 | Ga0496102_0000598 | 3300048905 | Bacteria | 37839 |
| 221 | Ga0496102_0232326 | 3300048905 | Bacteria | 1739 |
| 222 | Ga0496107_0170838 | 3300048910 | Bacteria | 1613 |
| 223 | Ga0496110_0000070 | 3300048913 | Bacteria | 51596 |
| 224 | Ga0496111_0030946 | 3300048914 | Bacteria | 3809 |
| 225 | Ga0496115_0008818 | 3300048918 | Bacteria | 7472 |
| 226 | Ga0496115_0010839 | 3300048918 | Bacteria | 6820 |
| 227 | Ga0496122_0008999 | 3300048925 | Bacteria | 10612 |
| 228 | Ga0496123_0003216 | 3300048926 | Bacteria | 18608 |
| 229 | Ga0496124_0004425 | 3300048927 | Bacteria | 16389 |
| 230 | Ga0496124_0088988 | 3300048927 | Bacteria | 2522 |
| 231 | Ga0495678_000004 | 3300049459 | Bacteria | 532920 |
| 232 | Ga0495678_001164 | 3300049459 | Bacteria | 21704 |
| 233 | Ga0495678_010510 | 3300049459 | Bacteria | 4496 |
| 234 | Ga0501047_0001396 | 3300049581 | Bacteria | 23683 |
| 235 | Ga0501222_003482 | 3300049662 | Bacteria | 2148 |
| 236 | Ga0501249_004407 | 3300049679 | Bacteria | 2860 |
| 237 | Ga0501252_000053 | 3300049682 | Bacteria | 5883 |
| 238 | Ga0501044_0143691 | 3300049823 | Unclassified | 2373 |
| 239 | 2547373796 | 2547132103 | Bacteria | 5115736 |
| 240 | 2643744926 | 2643221544 | Bacteria | 5886209 |
| 241 | 2643802816 | 2643221556 | Bacteria | 7251154 |
| 242 | 2644472321 | 2643221684 | Bacteria | 7145183 |
| 243 | 2843691428 | 2843690924 | Bacteria | 5169057 |
| 244 | 2846034437 | 2846033681 | Bacteria | 4377894 |
| 245 | 2846041539 | 2846037992 | Bacteria | 4526407 |
| 246 | 2857554716 | 2857553236 | Bacteria | 6166726 |
| 247 | 2919480110 | 2919476304 | Bacteria | 5888696 |
| 248 | 2998345459 | 2998344455 | Bacteria | 4222996 |
| 249 | 8047678583 | 8047673197 | Bacteria | 7395230 |
| 250 | Ga0157372_10323880 | |||
| 251 | rootL2_10008121 | |||
| 252 | rootL2_10023350 | |||
| 253 | Ga0007410J51695_1051508 | |||
| 254 | Ga0007409J51694_1010661 | |||
| 255 | Ga0007416J51690_1008758 | |||
| 256 | Ga0032354_1014295 | |||
| 257 | Ga0070658_10014967 | |||
| 258 | Ga0070659_100008224 | |||
| 259 | Ga0070707_100164770 | |||
| 260 | Ga0070699_100006305 | |||
| 261 | Ga0070665_100172121 | |||
| 262 | Ga0068855_100029331 | |||
| 263 | Ga0068852_100045428 | |||
| 264 | Ga0068860_100119314 | |||
| 265 | Ga0075434_100185119 | |||
| 266 | Ga0079104_1005913 | |||
| 267 | Ga0105244_10058737 | |||
| 268 | Ga0114129_10172023 | |||
| 269 | Ga0105241_10009473 | |||
| 270 | Ga0105242_10001583 | |||
| 271 | Ga0157372_10021117 | |||
| 272 | Ga0182006_1000029 | |||
| 273 | Ga0182005_1000012 | |||
| 274 | Ga0213872_10000978 | |||
| 275 | Ga0213872_10044165 | |||
| 276 | Ga0207705_10008062 | |||
| 277 | Ga0207657_10002528 | |||
| 278 | Ga0207686_10011808 | |||
| 279 | Ga0207667_10001620 | |||
| 280 | Ga0207698_10048550 | |||
| 281 | Ga0209281_1003031 | |||
| 282 | Ga0307515_10000180 | |||
| 283 | Ga0316177_1110341 | |||
| 284 | Ga0316180_1134049 | |||
| 285 | Ga0316182_1348082 | |||
| 286 | Ga0316182_1424482 | |||
| 287 | Ga0307513_10033801 | |||
| 288 | Ga0373928_0005504 | |||
| 289 | Ga0373932_0004235 | |||
| 290 | Ga0395899_0000725 | |||
| 291 | Ga0395899_0002451 | |||
| 292 | Ga0395899_0143024 | |||
| 293 | Ga0395900_0006909 | |||
| 294 | Ga0395900_0030011 | |||
| 295 | Ga0395900_0145858 | |||
| 296 | Ga0395905_0003380 | |||
| 297 | Ga0395905_0096040 | |||
| 298 | Ga0395901_0144634 | |||
| 299 | Ga0436361_0401959 | |||
| 300 | Ga0436361_0428529 | |||
| 301 | Ga0436361_0563588 | |||
| 302 | Ga0451577_0006484 | |||
| 303 | Ga0466969_0000978 | |||
| 304 | Ga0466972_0121392 | |||
| 305 | Ga0453683_0026710 | |||
| 306 | Ga0466965_0024043 | |||
| 307 | Ga0466966_0024738 | |||
| 308 | Ga0466966_0047142 | |||
| 309 | Ga0466961_0069440 | |||
| 310 | Ga0466961_0191195 | |||
| 311 | Ga0466963_0167330 | |||
| 312 | Ga0453684_0032854 | |||
| 313 | Ga0466957_0082573 | |||
| 314 | Ga0466959_0003388 | |||
| 315 | Ga0466959_0121836 | |||
| 316 | Ga0466967_0027375 | |||
| 317 | Ga0495627_000007 | |||
| 318 | Ga0495627_000255 | |||
| 319 | Ga0495629_0007659 | |||
| 320 | Ga0495629_0039293 | |||
| 321 | Ga0495650_0018047 | |||
| 322 | Ga0495582_0006022 | |||
| 323 | Ga0495605_0000024 | |||
| 324 | Ga0495605_0000236 | |||
| 325 | Ga0495605_0030663 | |||
| 326 | Ga0495584_0018274 | |||
| 327 | Ga0495584_0025761 | |||
| 328 | Ga0495585_0000699 | |||
| 329 | Ga0495585_0004781 | |||
| 330 | Ga0495594_0002110 | |||
| 331 | Ga0495596_0003350 | |||
| 332 | Ga0495596_0013245 | |||
| 333 | Ga0495607_0002598 | |||
| 334 | Ga0495607_0004489 | |||
| 335 | Ga0495607_0005828 | |||
| 336 | Ga0495607_0006249 | |||
| 337 | Ga0495583_0001721 | |||
| 338 | Ga0495583_0015638 | |||
| 339 | Ga0495583_0027107 | |||
| 340 | Ga0495606_0003596 | |||
| 341 | Ga0495606_0004700 | |||
| 342 | Ga0495616_0000567 | |||
| 343 | Ga0495616_0002830 | |||
| 344 | Ga0495616_0005264 | |||
| 345 | Ga0495631_0006699 | |||
| 346 | Ga0495631_0010465 | |||
| 347 | Ga0495631_0023513 | |||
| 348 | Ga0495631_0028165 | |||
| 349 | Ga0495631_0055008 | |||
| 350 | Ga0495632_0000203 | |||
| 351 | Ga0495643_0001166 | |||
| 352 | Ga0495643_0004586 | |||
| 353 | Ga0495643_0006608 | |||
| 354 | Ga0495644_0003515 | |||
| 355 | Ga0495644_0005589 | |||
| 356 | Ga0495644_0017548 | |||
| 357 | Ga0495644_0029246 | |||
| 358 | Ga0495648_0000290 | |||
| 359 | Ga0495648_0005983 | |||
| 360 | Ga0495648_0057774 | |||
| 361 | Ga0495648_0059879 | |||
| 362 | Ga0495648_0105094 | |||
| 363 | Ga0495666_0000736 | |||
| 364 | Ga0495666_0000824 | |||
| 365 | Ga0495666_0012050 | |||
| 366 | Ga0495666_0040991 | |||
| 367 | Ga0495642_0000550 | |||
| 368 | Ga0495642_0001516 | |||
| 369 | Ga0495642_0007889 | |||
| 370 | Ga0495642_0044079 | |||
| 371 | Ga0495652_0020211 | |||
| 372 | Ga0495654_0023258 | |||
| 373 | Ga0495654_0025081 | |||
| 374 | Ga0495654_0053967 | |||
| 375 | Ga0495665_0066163 | |||
| 376 | Ga0495665_0117294 | |||
| 377 | Ga0495586_0003616 | |||
| 378 | Ga0495586_0014525 | |||
| 379 | Ga0495586_0022089 | |||
| 380 | Ga0495609_0000554 | |||
| 381 | Ga0495609_0002030 | |||
| 382 | Ga0495609_0008055 | |||
| 383 | Ga0495597_0000219 | |||
| 384 | Ga0495597_0002570 | |||
| 385 | Ga0495597_0004754 | |||
| 386 | Ga0495597_0012237 | |||
| 387 | Ga0495622_0003018 | |||
| 388 | Ga0495622_0004162 | |||
| 389 | Ga0495622_0049315 | |||
| 390 | Ga0495633_0002490 | |||
| 391 | Ga0495633_0013352 | |||
| 392 | Ga0495633_0024643 | |||
| 393 | Ga0495633_0034679 | |||
| 394 | Ga0495633_0059154 | |||
| 395 | Ga0495656_0000016 | |||
| 396 | Ga0495668_0001547 | |||
| 397 | Ga0495668_0001603 | |||
| 398 | Ga0495668_0049663 | |||
| 399 | Ga0495611_0005643 | |||
| 400 | Ga0495611_0063896 | |||
| 401 | Ga0495625_0013638 | |||
| 402 | Ga0495625_0026677 | |||
| 403 | Ga0495625_0036332 | |||
| 404 | Ga0495625_0078260 | |||
| 405 | Ga0495659_0000027 | |||
| 406 | Ga0495659_0008004 | |||
| 407 | Ga0495661_0000882 | |||
| 408 | Ga0495661_0000956 | |||
| 409 | Ga0495661_0002000 | |||
| 410 | Ga0495661_0019651 | |||
| 411 | Ga0495661_0020417 | |||
| 412 | Ga0495661_0023851 | |||
| 413 | Ga0495661_0085880 | |||
| 414 | Ga0495661_0115268 | |||
| 415 | Ga0495588_0006180 | |||
| 416 | Ga0495588_0016096 | |||
| 417 | Ga0495588_0088722 | |||
| 418 | Ga0495646_0048221 | |||
| 419 | Ga0495613_0072338 | |||
| 420 | Ga0495613_0198548 | |||
| 421 | Ga0495624_0010731 | |||
| 422 | Ga0495670_0000317 | |||
| 423 | Ga0495670_0000845 | |||
| 424 | Ga0495670_0027638 | |||
| 425 | Ga0495671_0000812 | |||
| 426 | Ga0495671_0023499 | |||
| 427 | Ga0495649_0034084 | |||
| 428 | Ga0495589_0000598 | |||
| 429 | Ga0495589_0005703 | |||
| 430 | Ga0495660_0000173 | |||
| 431 | Ga0495660_0000285 | |||
| 432 | Ga0495660_0001243 | |||
| 433 | Ga0495660_0008898 | |||
| 434 | Ga0495660_0043680 | |||
| 435 | Ga0495581_0001884 | |||
| 436 | Ga0495581_0005692 | |||
| 437 | Ga0495581_0076409 | |||
| 438 | Ga0495604_0115174 | |||
| 439 | Ga0495636_0023567 | |||
| 440 | Ga0495674_0048064 | |||
| 441 | Ga0495672_0002856 | |||
| 442 | Ga0495672_0012364 | |||
| 443 | Ga0495676_0000100 | |||
| 444 | Ga0495676_0056625 | |||
| 445 | Ga0495680_0009597 | |||
| 446 | Ga0495683_0012564 | |||
| 447 | Ga0495683_0025800 | |||
| 448 | Ga0495683_0056506 | |||
| 449 | Ga0495687_000012 | |||
| 450 | Ga0495687_000279 | |||
| 451 | Ga0495687_050489 | |||
| 452 | Ga0495675_0012826 | |||
| 453 | Ga0495677_0000514 | |||
| 454 | Ga0495677_0010667 | |||
| 455 | Ga0495677_0014801 | |||
| 456 | Ga0495677_0016666 | |||
| 457 | Ga0495681_0000146 | |||
| 458 | Ga0495681_0000251 | |||
| 459 | Ga0495681_0015251 | |||
| 460 | Ga0495681_0040130 | |||
| 461 | Ga0495593_0010799 | |||
| 462 | Ga0495593_0015877 | |||
| 463 | Ga0495602_0027391 | |||
| 464 | Ga0495614_0002132 | |||
| 465 | Ga0495614_0050511 | |||
| 466 | Ga0495626_0000038 | |||
| 467 | Ga0495626_0000386 | |||
| 468 | Ga0496102_0000343 | |||
| 469 | Ga0496102_0000598 | |||
| 470 | Ga0496102_0232326 | |||
| 471 | Ga0496107_0170838 | |||
| 472 | Ga0496110_0000070 | |||
| 473 | Ga0496111_0030946 | |||
| 474 | Ga0496115_0008818 | |||
| 475 | Ga0496115_0010839 | |||
| 476 | Ga0496122_0008999 | |||
| 477 | Ga0496123_0003216 | |||
| 478 | Ga0496124_0004425 | |||
| 479 | Ga0496124_0088988 | |||
| 480 | Ga0495678_000004 | |||
| 481 | Ga0495678_001164 | |||
| 482 | Ga0495678_010510 | |||
| 483 | Ga0501047_0001396 | |||
| 484 | Ga0501222_003482 | |||
| 485 | Ga0501249_004407 | |||
| 486 | Ga0501252_000053 | |||
| 487 | Ga0501044_0143691 | |||
| 488 | 2547373796 | |||
| 489 | 2643744926 | |||
| 490 | 2643802816 | |||
| 491 | 2644472321 | |||
| 492 | 2843691428 | |||
| 493 | 2846034437 | |||
| 494 | 2846041539 | |||
| 495 | 2857554716 | |||
| 496 | 2919480110 | |||
| 497 | 2998345459 | |||
| 498 | 8047678583 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3qhp-assembly1.cif.gz_A | crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori | 0.8105 | 232 | 393 |
| 3qhp-assembly1.cif.gz_A | crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori | 0.7875 | 232 | 393 |
| 6tvp-assembly1.cif.gz_B | structure of mycobacterium smegmatis alpha-maltose-1-phosphate synthase glgm | 0.7796 | 1 | 408 |
| 5d01-assembly1.cif.gz_B | crystal structure of bsha from b. subtilis complexed with n-acetylglucosaminyl-malate | 0.7761 | 2 | 408 |
| 3mbo-assembly1.cif.gz_B | crystal structure of the glycosyltransferase babsha bound with udp and l-malate | 0.7655 | 2 | 408 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2G1J7_226_391_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8776 | 234 | 393 | 3.40.50.2000 |
| af_Q84QB1_230_385_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8673 | 231 | 392 | 3.40.50.2000 |
| af_Q2G0L3_321_481_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8647 | 236 | 393 | 3.40.50.2000 |
| 4x6lA03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8536 | 231 | 393 | 3.40.50.2000 |
| af_Q58577_179_333_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8531 | 232 | 393 | 3.40.50.2000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7S7AXF3-F1-model_v4 | Glycosyltransferase | 0.9881 | 234 | 407 |
GO:0009103
GO:0016757 GO:0045226 |
| AF-A0A366G054-F1-model_v4 | Glycosyl transferase family 1 | 0.9674 | 199 | 407 |
GO:0016757
|
| AF-A0A3S0WZP6-F1-model_v4 | Glycosyltransferase WbuB | 0.9656 | 1 | 407 |
GO:0016757
|
| AF-A0A354DEB0-F1-model_v4 | Glycosyltransferase WbuB | 0.9645 | 1 | 241 |
GO:0016740
|
| AF-A0A7S7AXF3-F1-model_v4 | Glycosyltransferase | 0.9608 | 234 | 407 |
GO:0009103
GO:0016757 GO:0045226 |