F360744

General Info

Members Datasets Scaffolds Average Seq Length
249 185 229 317

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10069743|Ga0157370_100697432
Length 348
Sequence MYRNGYFSANYQSCHASFPVSQSVALITNSVNAVTMPHLSIVIPVYKAEFFLDELYLRLKTTLESITVDFEILLVEDCGGDSSWRMIERLAEADPRVRGIQFSRNFGQHYGITAGLDYCQGDWVVVMDCDLQDRPEEISRLYAKAQEGYDVVLARRGLRRDPLLKRSTSWLFYKVFSYLADIEYDGETGNFRIMSRKVVDNFRHMREQLRFFGAMVQWMGFPTSSIEVEHAERLKGKSTYTFAMLWKLAAETTIAHSDKPLRLAVHLGFLMAFFAFSYGTYILGHAILYGSPVIGWSSIIVSLYFIGGIIIAILGVLGIYLGKTFDESKKRPLYIVKRVTFDGYNSPH

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
4 2643221645 Massilia sp. Root351 Isolate Unclassified
5 2643221664 Massilia sp. Root418 Isolate Unclassified
6 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
7 2738541280 Massilia sp. GV090 Isolate Unclassified
8 2738541297 Duganella sp. GV083 Isolate Unclassified
9 2738541300 Massilia sp. GV016 Isolate Unclassified
10 2738541357 Duganella sp. GV053 Isolate Unclassified
11 2738543003 Duganella sp. GV066 Isolate Unclassified
12 2738543018 Massilia sp. GV045 Isolate Unclassified
13 2738543026 Duganella sp. GV089 Isolate Unclassified
14 2738543029 Duganella sp. GV039 Isolate Unclassified
15 2738543030 Massilia sp. GV097 Isolate Unclassified
16 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
17 2821131069 Duganella sp. 1224 Isolate Unclassified
18 2842711865 Duganella sp. R-73148 Isolate Unclassified
19 2857558681 Duganella sp. R-74565 Isolate Unclassified
20 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
21 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
22 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
23 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
24 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
25 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
26 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
29 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
30 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
33 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
34 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
35 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
36 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
39 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
40 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
41 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
42 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
43 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
44 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
47 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
52 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
53 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
54 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
58 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
61 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
62 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
67 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
75 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
76 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
81 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
84 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
124 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
125 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
126 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
135 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
136 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
137 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
138 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
139 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
140 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
146 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
147 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
148 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
151 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
152 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
162 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
180 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
181 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.97
Metatranscriptomes 0
Isolates 8.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.02
Nodule 0.4
Rhizoplane 1.2
Rhizosphere 80.72
Stem 0
Stem Tuber 0
Unclassified 11.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_7370400 2162886011 Unclassified 3321
2 MBSR1b_contig_3160370 2162886012 Bacteria 7032
3 MBSR1b_contig_7283055 2162886012 Bacteria 7032
4 JGI25162J39368_1000234 3300002737 Bacteria 55812
5 JGI25163J39215_1000054 3300002771 Bacteria 51474
6 JGI25164J39214_1000183 3300002772 Bacteria 55812
7 JGI25165J46597_1000334 3300003214 Bacteria 55812
8 rootH1_10091845 3300003316 Bacteria 6744
9 Ga0055526_1000110 3300003771 Bacteria 72034
10 Ga0065712_10069755 3300005290 Bacteria 6754
11 Ga0065715_10090497 3300005293 Bacteria 6908
12 Ga0070658_10008012 3300005327 Bacteria 8498
13 Ga0070658_10064371 3300005327 Bacteria 2991
14 Ga0070683_100005055 3300005329 Bacteria 10952
15 Ga0068869_100029339 3300005334 Bacteria 3853
16 Ga0070680_100051384 3300005336 Bacteria 3363
17 Ga0070682_100024906 3300005337 Bacteria 3566
18 Ga0070689_100106145 3300005340 Bacteria 2228
19 Ga0070661_100002007 3300005344 Bacteria 14082
20 Ga0070692_10023003 3300005345 Bacteria 3050
21 Ga0070659_100017683 3300005366 Bacteria 5369
22 Ga0070701_10016671 3300005438 Bacteria 3420
23 Ga0070711_100031183 3300005439 Bacteria 3536
24 Ga0070700_100011403 3300005441 Bacteria 4924
25 Ga0070694_100117175 3300005444 Bacteria 1906
26 Ga0070707_100139407 3300005468 Bacteria 2360
27 Ga0070679_100300260 3300005530 Unclassified 1556
28 Ga0070684_100010436 3300005535 Bacteria 7359
29 Ga0070693_100049433 3300005547 Bacteria 2399
30 Ga0070665_100178075 3300005548 Unclassified 2127
31 Ga0070704_100002584 3300005549 Bacteria 10211
32 Ga0068855_100023636 3300005563 Bacteria 7361
33 Ga0068855_100246484 3300005563 Bacteria 1994
34 Ga0070664_100048476 3300005564 Bacteria 3590
35 Ga0068857_100020007 3300005577 Bacteria 5884
36 Ga0068854_100005995 3300005578 Bacteria 7696
37 Ga0068856_100007609 3300005614 Bacteria 10573
38 Ga0068856_100180590 3300005614 Unclassified 2123
39 Ga0068852_100013548 3300005616 Bacteria 6242
40 Ga0068859_100060395 3300005617 Bacteria 3820
41 Ga0068861_100020355 3300005719 Bacteria 4752
42 Ga0068861_100044337 3300005719 Bacteria 3344
43 Ga0068851_10011033 3300005834 Bacteria 4229
44 Ga0068862_100086858 3300005844 Bacteria 2720
45 Ga0075365_10034518 3300006038 Bacteria 3266
46 Ga0075365_10072247 3300006038 Bacteria 2324
47 Ga0075364_10031168 3300006051 Unclassified 3426
48 Ga0075432_10004095 3300006058 Bacteria 4975
49 Ga0075432_10026735 3300006058 Bacteria 1983
50 Ga0075431_100339884 3300006847 Unclassified 1511
51 Ga0075434_100005631 3300006871 Bacteria 11422
52 Ga0097620_100060395 3300006931 Bacteria 3820
53 Ga0075435_100180593 3300007076 Unclassified 1783
54 Ga0105244_10001597 3300009036 Bacteria 18004
55 Ga0105244_10016253 3300009036 Bacteria 4243
56 Ga0105244_10023816 3300009036 Bacteria 3350
57 Ga0105240_10008966 3300009093 Bacteria 14219
58 Ga0105243_10006904 3300009148 Bacteria 8749
59 Ga0105243_10110809 3300009148 Bacteria 2296
60 Ga0105241_10089846 3300009174 Bacteria 2421
61 Ga0105248_10123542 3300009177 Bacteria 2920
62 Ga0105238_10011612 3300009551 Bacteria 8872
63 Ga0105238_10511377 3300009551 Bacteria 1203
64 Ga0157373_10028458 3300013100 Bacteria 4032
65 Ga0157373_10041310 3300013100 Bacteria 3299
66 Ga0157371_10067104 3300013102 Bacteria 2540
67 Ga0157370_10069743 3300013104 Bacteria 3319
68 Ga0157370_10131954 3300013104 Bacteria 2330
69 Ga0157369_10016476 3300013105 Bacteria 8312
70 Ga0157374_10042190 3300013296 Bacteria 4207
71 Ga0157374_10265914 3300013296 Bacteria 1690
72 Ga0157372_10012064 3300013307 Bacteria 9203
73 Ga0157372_10025872 3300013307 Bacteria 6382
74 Ga0157372_10745270 3300013307 Bacteria 1139
75 Ga0157372_10861870 3300013307 Bacteria 1051
76 Ga0157375_10039228 3300013308 Bacteria 4556
77 Ga0213872_10003541 3300021361 Bacteria 8614
78 Ga0213872_10004427 3300021361 Bacteria 7461
79 Ga0213872_10004570 3300021361 Bacteria 7312
80 Ga0209760_100033 3300025207 Bacteria 136583
81 Ga0207427_100174 3300025231 Bacteria 70353
82 Ga0209437_100002 3300025233 Bacteria 1574801
83 Ga0209233_1000004 3300025261 Bacteria 1574798
84 Ga0209564_1000038 3300025295 Bacteria 414357
85 Ga0207697_10081506 3300025315 Unclassified 1363
86 Ga0207655_1021550 3300025728 Bacteria 3266
87 Ga0207705_10019013 3300025909 Bacteria 4914
88 Ga0207695_10005426 3300025913 Bacteria 16918
89 Ga0207663_10045347 3300025916 Bacteria 2704
90 Ga0207660_10129057 3300025917 Bacteria 1922
91 Ga0207652_10259070 3300025921 Unclassified 1569
92 Ga0207690_10017822 3300025932 Bacteria 4345
93 Ga0207706_10109919 3300025933 Unclassified 2425
94 Ga0207709_10011581 3300025935 Bacteria 4864
95 Ga0207711_10287649 3300025941 Bacteria 1515
96 Ga0207661_10023558 3300025944 Bacteria 4653
97 Ga0207679_10011359 3300025945 Bacteria 5763
98 Ga0207667_10163403 3300025949 Unclassified 2289
99 Ga0207708_10020968 3300026075 Bacteria 4931
100 Ga0207702_10021984 3300026078 Bacteria 5284
101 Ga0207674_10028278 3300026116 Bacteria 5918
102 Ga0207675_100016010 3300026118 Bacteria 7000
103 Ga0207675_100036112 3300026118 Bacteria 4609
104 Ga0207698_10128058 3300026142 Bacteria 2163
105 Ga0207428_10007863 3300027907 Bacteria 9698
106 Ga0207428_10008406 3300027907 Bacteria 9322
107 Ga0207428_10045895 3300027907 Bacteria 3516
108 Ga0268266_10075195 3300028379 Bacteria 2934
109 Ga0268265_10069175 3300028380 Bacteria 2740
110 Ga0265336_10002017 3300028666 Bacteria 8669
111 Ga0307515_10000010 3300028794 Bacteria 651586
112 Ga0265338_10006516 3300028800 Bacteria 14843
113 Ga0316181_1067667 3300030744 Bacteria 3172
114 Ga0307408_100000043 3300031548 Bacteria 170358
115 Ga0265314_10014477 3300031711 Bacteria 6307
116 Ga0307406_10000190 3300031901 Bacteria 36607
117 Ga0307412_10002896 3300031911 Bacteria 9509
118 Ga0307414_10008764 3300032004 Bacteria 5766
119 Ga0307414_10009602 3300032004 Bacteria 5566
120 Ga0395899_0000426 3300037312 Bacteria 48742
121 Ga0395899_0009903 3300037312 Bacteria 7311
122 Ga0395899_0113219 3300037312 Bacteria 1949
123 Ga0395899_0164189 3300037312 Bacteria 1567
124 Ga0395900_0000686 3300037418 Bacteria 45163
125 Ga0395900_0000752 3300037418 Bacteria 43126
126 Ga0395900_0010834 3300037418 Bacteria 9327
127 Ga0395900_0065686 3300037418 Bacteria 3727
128 Ga0395900_0561840 3300037418 Unclassified 1084
129 Ga0395898_0001811 3300037466 Bacteria 27628
130 Ga0395898_0004065 3300037466 Bacteria 16067
131 Ga0395898_0355888 3300037466 Bacteria 1396
132 Ga0395901_0004071 3300038443 Bacteria 14730
133 Ga0395901_0022436 3300038443 Bacteria 6470
134 Ga0436365_0743893 3300039437 Bacteria 4999
135 Ga0436361_0066364 3300039447 Bacteria 4180
136 Ga0436361_0901369 3300039447 Bacteria 7493
137 Ga0436361_1009709 3300039447 Bacteria 25382
138 Ga0439465_0000410 3300041413 Bacteria 12488
139 Ga0451855_0901403 3300041511 Bacteria 8857
140 Ga0439445_0000516 3300042004 Bacteria 7802
141 Ga0439445_0038298 3300042004 Bacteria 1267
142 Ga0453683_0030036 3300044673 Bacteria 3436
143 Ga0453683_0036561 3300044673 Bacteria 3091
144 Ga0453684_0000273 3300044712 Bacteria 222658
145 Ga0453684_0010371 3300044712 Bacteria 15947
146 Ga0453684_0014451 3300044712 Bacteria 12628
147 Ga0451576_0426394 3300045051 Bacteria 1392
148 Ga0495627_008844 3300046453 Bacteria 3737
149 Ga0495638_0109336 3300046460 Bacteria 1644
150 Ga0495650_0000154 3300046471 Bacteria 156130
151 Ga0495650_0000696 3300046471 Bacteria 43354
152 Ga0495650_0033696 3300046471 Bacteria 2276
153 Ga0495585_0001976 3300046492 Bacteria 15273
154 Ga0495606_0000576 3300046507 Bacteria 58266
155 Ga0495606_0000982 3300046507 Bacteria 41525
156 Ga0495606_0002810 3300046507 Bacteria 19380
157 Ga0495606_0017513 3300046507 Bacteria 5412
158 Ga0495637_0000223 3300046520 Bacteria 43805
159 Ga0495643_0000098 3300046522 Bacteria 145645
160 Ga0495643_0000239 3300046522 Bacteria 82416
161 Ga0495643_0004443 3300046522 Bacteria 9799
162 Ga0495648_0012628 3300046524 Bacteria 6284
163 Ga0495642_0018246 3300046528 Bacteria 2745
164 Ga0495654_0000004 3300046530 Bacteria 515304
165 Ga0495654_0001921 3300046530 Bacteria 13791
166 Ga0495654_0003368 3300046530 Bacteria 9845
167 Ga0495654_0083591 3300046530 Bacteria 1492
168 Ga0495609_0000545 3300046538 Bacteria 29804
169 Ga0495609_0025911 3300046538 Bacteria 2686
170 Ga0495597_0000239 3300046542 Bacteria 49769
171 Ga0495597_0000496 3300046542 Bacteria 32885
172 Ga0495597_0007041 3300046542 Bacteria 5761
173 Ga0495597_0010549 3300046542 Bacteria 4509
174 Ga0495668_0000049 3300046616 Bacteria 217657
175 Ga0495668_0001787 3300046616 Bacteria 19644
176 Ga0495625_0021008 3300046660 Bacteria 5033
177 Ga0495659_0000046 3300046664 Bacteria 55591
178 Ga0495661_0152870 3300046665 Bacteria 1245
179 Ga0495670_0000159 3300046691 Bacteria 29368
180 Ga0495671_0000070 3300046692 Bacteria 97889
181 Ga0495671_0000243 3300046692 Bacteria 47019
182 Ga0495671_0011103 3300046692 Bacteria 4971
183 Ga0495649_0002117 3300046694 Bacteria 14248
184 Ga0495649_0183761 3300046694 Bacteria 1090
185 Ga0495660_0010955 3300046810 Bacteria 5270
186 Ga0495672_0000184 3300047320 Bacteria 91103
187 Ga0495672_0000789 3300047320 Bacteria 34364
188 Ga0495672_0004268 3300047320 Bacteria 11798
189 Ga0495687_000732 3300047443 Bacteria 36155
190 Ga0495679_003538 3300047446 Bacteria 7465
191 Ga0495673_0000017 3300047469 Bacteria 574970
192 Ga0495673_0000037 3300047469 Bacteria 307717
193 Ga0495686_0000069 3300047472 Bacteria 217778
194 Ga0495686_0000461 3300047472 Bacteria 61097
195 Ga0495686_0008142 3300047472 Bacteria 7746
196 Ga0496102_0065639 3300048905 Bacteria 3327
197 Ga0496103_0048809 3300048906 Bacteria 2617
198 Ga0496115_0275783 3300048918 Bacteria 1381
199 Ga0496116_0000146 3300048919 Bacteria 142528
200 Ga0496116_0026372 3300048919 Bacteria 4253
201 Ga0496117_0002949 3300048920 Bacteria 20571
202 Ga0496118_0031654 3300048921 Bacteria 4379
203 Ga0496119_0121138 3300048922 Bacteria 1438
204 Ga0496123_0003363 3300048926 Bacteria 18084
205 Ga0496124_0292212 3300048927 Bacteria 1182
206 Ga0496126_0001412 3300048929 Bacteria 38001
207 Ga0495678_001151 3300049459 Bacteria 21949
208 Ga0501034_0116847 3300049571 Bacteria 2655
209 Ga0501037_0009901 3300049573 Bacteria 6993
210 Ga0501038_0084763 3300049574 Bacteria 2666
211 Ga0501039_0000561 3300049575 Bacteria 26874
212 Ga0501041_0000566 3300049577 Bacteria 19241
213 Ga0501071_0006215 3300049587 Bacteria 7747
214 Ga0501072_0048500 3300049588 Bacteria 3345
215 Ga0501075_0000221 3300049591 Bacteria 30230
216 Ga0501076_0000882 3300049592 Bacteria 19497
217 Ga0501079_0181366 3300049741 Bacteria 1643
218 Ga0501080_0004150 3300049742 Bacteria 12844
219 Ga0501081_0000368 3300049743 Bacteria 24573
220 Ga0501269_000031 3300049766 Bacteria 44939
221 Ga0501035_0055758 3300049822 Bacteria 3528
222 Ga0501045_0020629 3300049824 Bacteria 4709
223 nmdc:mga00v17_136042_c1 3300050491 Unclassified 1573
224 nmdc:mga00v17_50081_c1 3300050491 Bacteria 2536
225 nmdc:mga06r32_370267_c1 3300050510 Unclassified 1416
226 nmdc:mga0n895_7447_c1 3300050512 Bacteria 9394
227 nmdc:mga0rr50_32408_c1 3300050513 Unclassified 3723
228 Ga0501082_0078619 3300060353 Bacteria 2845
229 Ga0530510_0025053 3300061734 Bacteria 4265

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039437 Ga0436365_0743893 Ga0436365_0743893_1586_2614 262
2 3300044673 Ga0453683_0030036 Ga0453683_0030036_2429_3418 276
3 3300048918 Ga0496115_0275783 Ga0496115_0275783_275_1222 281
4 3300002771 JGI25163J39215_1000054 JGI25163J39215_100005434 283
5 3300025207 Ga0209760_100033 Ga0209760_100033125 289
6 3300025233 Ga0209437_100002 Ga0209437_10000226 289
7 3300025261 Ga0209233_1000004 Ga0209233_10000041400 289
8 3300037312 Ga0395899_0113219 Ga0395899_0113219_985_1908 292
9 3300037418 Ga0395900_0065686 Ga0395900_0065686_1567_2490 292
10 3300005337 Ga0070682_100024906 Ga0070682_1000249063 293
11 3300044712 Ga0453684_0014451 Ga0453684_0014451_3850_4791 294
12 3300046492 Ga0495585_0001976 Ga0495585_0001976_327_1223 294
13 3300046691 Ga0495670_0000159 Ga0495670_0000159_15749_16645 294
14 3300046530 Ga0495654_0083591 Ga0495654_0083591_10_924 296
15 iso_pu_bacteria 2728369107 2729200903 298
16 3300005548 Ga0070665_100178075 Ga0070665_1001780752 299
17 3300028379 Ga0268266_10075195 Ga0268266_100751953 299
18 3300048926 Ga0496123_0003363 Ga0496123_0003363_4209_5132 299
19 iso_pu_bacteria 2775506739 2775674433 300
20 iso_pu_bacteria 2919097161 2919098049 300
21 3300037312 Ga0395899_0009903 Ga0395899_0009903_4533_5447 303
22 3300037418 Ga0395900_0000752 Ga0395900_0000752_16870_17784 303
23 3300037466 Ga0395898_0004065 Ga0395898_0004065_93_1007 303
24 3300038443 Ga0395901_0004071 Ga0395901_0004071_3276_4190 303
25 3300005327 Ga0070658_10008012 Ga0070658_100080126 304
26 3300005530 Ga0070679_100300260 Ga0070679_1003002601 304
27 3300005563 Ga0068855_100246484 Ga0068855_1002464842 304
28 3300013104 Ga0157370_10131954 Ga0157370_101319542 304
29 3300013307 Ga0157372_10745270 Ga0157372_107452701 304
30 3300013307 Ga0157372_10861870 Ga0157372_108618702 304
31 3300013308 Ga0157375_10039228 Ga0157375_100392284 304
32 3300025909 Ga0207705_10019013 Ga0207705_100190133 304
33 3300025921 Ga0207652_10259070 Ga0207652_102590701 304
34 3300031911 Ga0307412_10002896 Ga0307412_100028965 304
35 3300037312 Ga0395899_0000426 Ga0395899_0000426_30807_31724 304
36 3300037418 Ga0395900_0000686 Ga0395900_0000686_4767_5684 304
37 3300037466 Ga0395898_0001811 Ga0395898_0001811_11581_12498 304
38 3300038443 Ga0395901_0022436 Ga0395901_0022436_2563_3480 304
39 3300041413 Ga0439465_0000410 Ga0439465_0000410_4380_5297 304
40 3300042004 Ga0439445_0000516 Ga0439445_0000516_4146_5063 304
41 3300042004 Ga0439445_0038298 Ga0439445_0038298_109_1026 304
42 3300046453 Ga0495627_008844 Ga0495627_008844_967_1884 304
43 3300046460 Ga0495638_0109336 Ga0495638_0109336_10_927 304
44 3300046522 Ga0495643_0004443 Ga0495643_0004443_5903_6820 304
45 3300047472 Ga0495686_0000069 Ga0495686_0000069_100678_101595 304
46 3300049766 Ga0501269_000031 Ga0501269_000031_13706_14623 304
47 3300009093 Ga0105240_10008966 Ga0105240_100089664 305
48 3300009551 Ga0105238_10511377 Ga0105238_105113771 305
49 3300013100 Ga0157373_10041310 Ga0157373_100413104 305
50 3300025913 Ga0207695_10005426 Ga0207695_100054269 305
51 3300049571 Ga0501034_0116847 Ga0501034_0116847_55_1020 305
52 3300028794 Ga0307515_10000010 Ga0307515_1000001029 306
53 3300032004 Ga0307414_10008764 Ga0307414_100087641 306
54 3300044673 Ga0453683_0036561 Ga0453683_0036561_890_1810 306
55 iso_pu_bacteria 2917070673 2917072937 306
56 iso_pu_bacteria 2935353572 2935359365 306
57 3300013307 Ga0157372_10025872 Ga0157372_100258725 307
58 3300028666 Ga0265336_10002017 Ga0265336_100020174 307
59 3300003771 Ga0055526_1000110 Ga0055526_100011028 308
60 3300009036 Ga0105244_10016253 Ga0105244_100162535 308
61 3300025295 Ga0209564_1000038 Ga0209564_1000038263 308
62 3300025728 Ga0207655_1021550 Ga0207655_10215502 308
63 3300028800 Ga0265338_10006516 Ga0265338_100065169 308
64 3300032004 Ga0307414_10009602 Ga0307414_100096022 308
65 3300046507 Ga0495606_0000576 Ga0495606_0000576_19155_20105 308
66 3300046616 Ga0495668_0001787 Ga0495668_0001787_1629_2579 308
67 3300046665 Ga0495661_0152870 Ga0495661_0152870_248_1198 308
68 3300046692 Ga0495671_0011103 Ga0495671_0011103_1520_2470 308
69 3300048919 Ga0496116_0026372 Ga0496116_0026372_2035_2985 308
70 3300048922 Ga0496119_0121138 Ga0496119_0121138_446_1396 308
71 3300048927 Ga0496124_0292212 Ga0496124_0292212_82_1032 308
72 iso_pu_bacteria 2738541300 2738846232 308
73 iso_pu_bacteria 2738543018 2739275119 308
74 iso_pu_bacteria 2738543030 2739344163 308
75 iso_pu_bacteria 2857558681 2857561071 308
76 3300005336 Ga0070680_100051384 Ga0070680_1000513842 309
77 3300006038 Ga0075365_10072247 Ga0075365_100722472 309
78 3300025917 Ga0207660_10129057 Ga0207660_101290572 309
79 3300046471 Ga0495650_0000696 Ga0495650_0000696_15025_15978 309
80 3300046530 Ga0495654_0003368 Ga0495654_0003368_1026_1979 309
81 3300046542 Ga0495597_0010549 Ga0495597_0010549_2461_3414 309
82 3300046664 Ga0495659_0000046 Ga0495659_0000046_3576_4529 309
83 3300046692 Ga0495671_0000243 Ga0495671_0000243_30390_31343 309
84 3300046810 Ga0495660_0010955 Ga0495660_0010955_4302_5255 309
85 3300047320 Ga0495672_0000184 Ga0495672_0000184_78084_79037 309
86 3300047446 Ga0495679_003538 Ga0495679_003538_3510_4463 309
87 iso_pu_bacteria 2643221645 2644250946 309
88 iso_pu_bacteria 2738541297 2738825399 309
89 iso_pu_bacteria 2738541357 2739149196 309
90 iso_pu_bacteria 2738543003 2739191115 309
91 iso_pu_bacteria 2738543026 2739317592 309
92 iso_pu_bacteria 2738543029 2739335833 309
93 iso_pu_bacteria 2821131069 2821133997 309
94 3300005327 Ga0070658_10064371 Ga0070658_100643713 310
95 3300005329 Ga0070683_100005055 Ga0070683_1000050555 310
96 3300005344 Ga0070661_100002007 Ga0070661_1000020075 310
97 3300005366 Ga0070659_100017683 Ga0070659_1000176835 310
98 3300005468 Ga0070707_100139407 Ga0070707_1001394072 310
99 3300005535 Ga0070684_100010436 Ga0070684_1000104365 310
100 3300005547 Ga0070693_100049433 Ga0070693_1000494332 310
101 3300005564 Ga0070664_100048476 Ga0070664_1000484763 310
102 3300005577 Ga0068857_100020007 Ga0068857_1000200075 310
103 3300005578 Ga0068854_100005995 Ga0068854_1000059953 310
104 3300005614 Ga0068856_100007609 Ga0068856_1000076095 310
105 3300005616 Ga0068852_100013548 Ga0068852_1000135485 310
106 3300005834 Ga0068851_10011033 Ga0068851_100110333 310
107 3300006847 Ga0075431_100339884 Ga0075431_1003398841 310
108 3300009036 Ga0105244_10001597 Ga0105244_100015973 310
109 3300009174 Ga0105241_10089846 Ga0105241_100898462 310
110 3300009551 Ga0105238_10011612 Ga0105238_100116126 310
111 3300013100 Ga0157373_10028458 Ga0157373_100284583 310
112 3300013102 Ga0157371_10067104 Ga0157371_100671042 310
113 3300013105 Ga0157369_10016476 Ga0157369_100164766 310
114 3300013296 Ga0157374_10042190 Ga0157374_100421903 310
115 3300013307 Ga0157372_10012064 Ga0157372_100120643 310
116 3300025932 Ga0207690_10017822 Ga0207690_100178223 310
117 3300025944 Ga0207661_10023558 Ga0207661_100235584 310
118 3300025945 Ga0207679_10011359 Ga0207679_100113592 310
119 3300026116 Ga0207674_10028278 Ga0207674_100282782 310
120 3300026142 Ga0207698_10128058 Ga0207698_101280582 310
121 3300050510 nmdc:mga06r32_370267_c1 nmdc:mga06r32_370267_c1_45_1016 310
122 3300003316 rootH1_10091845 rootH1_100918455 311
123 3300005563 Ga0068855_100023636 Ga0068855_1000236362 311
124 3300009177 Ga0105248_10123542 Ga0105248_101235421 311
125 3300013296 Ga0157374_10265914 Ga0157374_102659143 311
126 3300021361 Ga0213872_10003541 Ga0213872_100035414 311
127 3300025941 Ga0207711_10287649 Ga0207711_102876491 311
128 3300025949 Ga0207667_10163403 Ga0207667_101634032 311
129 3300039447 Ga0436361_0066364 Ga0436361_0066364_2214_3167 311
130 3300045051 Ga0451576_0426394 Ga0451576_0426394_349_1296 311
131 3300049573 Ga0501037_0009901 Ga0501037_0009901_968_1909 311
132 3300049574 Ga0501038_0084763 Ga0501038_0084763_1311_2252 311
133 3300049575 Ga0501039_0000561 Ga0501039_0000561_13281_14222 311
134 3300049577 Ga0501041_0000566 Ga0501041_0000566_7008_7949 311
135 3300049587 Ga0501071_0006215 Ga0501071_0006215_2767_3708 311
136 3300049588 Ga0501072_0048500 Ga0501072_0048500_163_1104 311
137 3300049591 Ga0501075_0000221 Ga0501075_0000221_20637_21578 311
138 3300049592 Ga0501076_0000882 Ga0501076_0000882_6032_6973 311
139 3300049741 Ga0501079_0181366 Ga0501079_0181366_314_1255 311
140 3300049742 Ga0501080_0004150 Ga0501080_0004150_4343_5284 311
141 3300049743 Ga0501081_0000368 Ga0501081_0000368_6240_7181 311
142 3300049822 Ga0501035_0055758 Ga0501035_0055758_1006_1947 311
143 3300049824 Ga0501045_0020629 Ga0501045_0020629_1809_2750 311
144 3300060353 Ga0501082_0078619 Ga0501082_0078619_344_1285 311
145 3300061734 Ga0530510_0025053 Ga0530510_0025053_2897_3838 311
146 iso_pu_bacteria 2548876994 2550694824 311
147 3300002737 JGI25162J39368_1000234 JGI25162J39368_100023433 312
148 3300002772 JGI25164J39214_1000183 JGI25164J39214_100018333 312
149 3300003214 JGI25165J46597_1000334 JGI25165J46597_100033433 312
150 3300006051 Ga0075364_10031168 Ga0075364_100311682 312
151 3300009148 Ga0105243_10006904 Ga0105243_100069047 312
152 3300025231 Ga0207427_100174 Ga0207427_10017426 312
153 3300025935 Ga0207709_10011581 Ga0207709_100115814 312
154 3300030744 Ga0316181_1067667 Ga0316181_10676674 312
155 3300041511 Ga0451855_0901403 Ga0451855_0901403_5411_6361 312
156 3300046507 Ga0495606_0017513 Ga0495606_0017513_998_1948 312
157 3300046522 Ga0495643_0000098 Ga0495643_0000098_51893_52846 312
158 3300046542 Ga0495597_0000496 Ga0495597_0000496_31840_32793 312
159 3300046542 Ga0495597_0007041 Ga0495597_0007041_2685_3635 312
160 3300046616 Ga0495668_0000049 Ga0495668_0000049_33612_34565 312
161 3300046694 Ga0495649_0002117 Ga0495649_0002117_6385_7338 312
162 3300047320 Ga0495672_0000789 Ga0495672_0000789_31846_32799 312
163 3300047469 Ga0495673_0000037 Ga0495673_0000037_117191_118144 312
164 3300047472 Ga0495686_0008142 Ga0495686_0008142_3304_4257 312
165 3300048919 Ga0496116_0000146 Ga0496116_0000146_63514_64464 312
166 3300048920 Ga0496117_0002949 Ga0496117_0002949_12407_13357 312
167 3300048921 Ga0496118_0031654 Ga0496118_0031654_1887_2837 312
168 3300049459 Ga0495678_001151 Ga0495678_001151_11221_12174 312
169 3300050491 nmdc:mga00v17_136042_c1 nmdc:mga00v17_136042_c1_271_1257 312
170 3300021361 Ga0213872_10004427 Ga0213872_100044273 313
171 3300031711 Ga0265314_10014477 Ga0265314_100144772 313
172 3300039447 Ga0436361_1009709 Ga0436361_1009709_16815_17771 313
173 3300046471 Ga0495650_0033696 Ga0495650_0033696_102_1058 313
174 3300046522 Ga0495643_0000239 Ga0495643_0000239_40382_41347 313
175 3300046524 Ga0495648_0012628 Ga0495648_0012628_4118_5080 313
176 3300046538 Ga0495609_0000545 Ga0495609_0000545_26231_27196 313
177 3300046538 Ga0495609_0025911 Ga0495609_0025911_1684_2646 313
178 3300046542 Ga0495597_0000239 Ga0495597_0000239_40855_41820 313
179 3300046660 Ga0495625_0021008 Ga0495625_0021008_1356_2309 313
180 3300047443 Ga0495687_000732 Ga0495687_000732_8121_9086 313
181 3300047469 Ga0495673_0000017 Ga0495673_0000017_340395_341351 313
182 3300048929 Ga0496126_0001412 Ga0496126_0001412_5782_6738 313
183 iso_pu_bacteria 2842711865 2842717881 313
184 3300044712 Ga0453684_0000273 Ga0453684_0000273_52264_53217 314
185 3300046520 Ga0495637_0000223 Ga0495637_0000223_32595_33548 314
186 3300046530 Ga0495654_0000004 Ga0495654_0000004_386421_387374 314
187 3300047472 Ga0495686_0000461 Ga0495686_0000461_19287_20246 314
188 iso_pu_bacteria 2643221664 2644356359 314
189 iso_pu_bacteria 2738541280 2738739000 314
190 3300005614 Ga0068856_100180590 Ga0068856_1001805903 315
191 3300005719 Ga0068861_100044337 Ga0068861_1000443373 315
192 3300006058 Ga0075432_10004095 Ga0075432_100040954 315
193 3300006058 Ga0075432_10026735 Ga0075432_100267353 315
194 3300009036 Ga0105244_10023816 Ga0105244_100238162 315
195 3300026078 Ga0207702_10021984 Ga0207702_100219843 315
196 3300026118 Ga0207675_100036112 Ga0207675_1000361123 315
197 3300027907 Ga0207428_10007863 Ga0207428_1000786310 315
198 3300027907 Ga0207428_10008406 Ga0207428_100084069 315
199 3300027907 Ga0207428_10045895 Ga0207428_100458953 315
200 3300037312 Ga0395899_0164189 Ga0395899_0164189_487_1479 315
201 3300037418 Ga0395900_0010834 Ga0395900_0010834_7739_8731 315
202 3300037466 Ga0395898_0355888 Ga0395898_0355888_300_1292 315
203 3300044712 Ga0453684_0010371 Ga0453684_0010371_1922_2899 315
204 3300046530 Ga0495654_0001921 Ga0495654_0001921_8348_9361 315
205 3300046694 Ga0495649_0183761 Ga0495649_0183761_63_1076 315
206 3300047320 Ga0495672_0004268 Ga0495672_0004268_5346_6359 315
207 3300048905 Ga0496102_0065639 Ga0496102_0065639_2274_3257 315
208 3300050491 nmdc:mga00v17_50081_c1 nmdc:mga00v17_50081_c1_967_1986 315
209 3300005334 Ga0068869_100029339 Ga0068869_1000293393 316
210 3300005340 Ga0070689_100106145 Ga0070689_1001061453 316
211 3300005345 Ga0070692_10023003 Ga0070692_100230032 316
212 3300005438 Ga0070701_10016671 Ga0070701_100166712 316
213 3300005441 Ga0070700_100011403 Ga0070700_1000114032 316
214 3300005444 Ga0070694_100117175 Ga0070694_1001171752 316
215 3300005549 Ga0070704_100002584 Ga0070704_10000258410 316
216 3300005617 Ga0068859_100060395 Ga0068859_1000603952 316
217 3300005719 Ga0068861_100020355 Ga0068861_1000203553 316
218 3300005844 Ga0068862_100086858 Ga0068862_1000868582 316
219 3300006931 Ga0097620_100060395 Ga0097620_1000603954 316
220 3300009148 Ga0105243_10110809 Ga0105243_101108092 316
221 3300021361 Ga0213872_10004570 Ga0213872_100045703 316
222 3300026075 Ga0207708_10020968 Ga0207708_100209682 316
223 3300026118 Ga0207675_100016010 Ga0207675_1000160103 316
224 3300028380 Ga0268265_10069175 Ga0268265_100691752 316
225 3300039447 Ga0436361_0901369 Ga0436361_0901369_5512_6480 316
226 3300046471 Ga0495650_0000154 Ga0495650_0000154_7810_8784 316
227 3300046507 Ga0495606_0000982 Ga0495606_0000982_37698_38672 316
228 3300046507 Ga0495606_0002810 Ga0495606_0002810_15113_16081 316
229 3300046528 Ga0495642_0018246 Ga0495642_0018246_1620_2594 316
230 3300005439 Ga0070711_100031183 Ga0070711_1000311832 317
231 3300006038 Ga0075365_10034518 Ga0075365_100345183 317
232 3300013104 Ga0157370_10069743 Ga0157370_100697432 317
233 3300025916 Ga0207663_10045347 Ga0207663_100453474 317
234 3300031548 Ga0307408_100000043 Ga0307408_10000004352 317
235 3300031901 Ga0307406_10000190 Ga0307406_100001904 317
236 3300048906 Ga0496103_0048809 Ga0496103_0048809_82_1098 317
237 3300037418 Ga0395900_0561840 Ga0395900_0561840_35_1072 318
238 3300046692 Ga0495671_0000070 Ga0495671_0000070_18396_19373 318
239 2162886011 MRS1b_contig_7370400 MRS1b_0002.00003360 319
240 2162886012 MBSR1b_contig_3160370 MBSR1b_0592.00008140 319
241 2162886012 MBSR1b_contig_7283055 MBSR1b_0325.00002260 319
242 3300005290 Ga0065712_10069755 Ga0065712_100697554 319
243 3300005293 Ga0065715_10090497 Ga0065715_100904975 319
244 3300006871 Ga0075434_100005631 Ga0075434_1000056313 319
245 3300007076 Ga0075435_100180593 Ga0075435_1001805932 319
246 3300025315 Ga0207697_10081506 Ga0207697_100815062 319
247 3300025933 Ga0207706_10109919 Ga0207706_101099193 319
248 3300050512 nmdc:mga0n895_7447_c1 nmdc:mga0n895_7447_c1_1580_2539 319
249 3300050513 nmdc:mga0rr50_32408_c1 nmdc:mga0rr50_32408_c1_1167_2126 319

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

40

203

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ekp-assembly1.cif.gz_A structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.8152 9 312
5eke-assembly1.cif.gz_A structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (f215a mutant) 0.8091 9 312
5ekp-assembly1.cif.gz_B structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.7972 9 312
5ekp-assembly1.cif.gz_A structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.7822 9 312
5eke-assembly1.cif.gz_C structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (f215a mutant) 0.777 9 319
ID Description Score Start End Superfamily
af_Q2G2T7_1_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9437 11 211 3.90.550.10
af_P77293_1_188_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9406 11 195 3.90.550.10
af_P9WMX5_1_216_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9331 11 225 3.90.550.10
af_P77293_1_188_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9214 11 195 3.90.550.10
af_P9WMX5_1_216_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9208 11 225 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A520IPY6-F1-model_v4 Glycosyltransferase 0.9799 9 123 GO:0005886
GO:0016757
AF-A0A7C5FNM4-F1-model_v4 Glycosyltransferase 0.9798 9 118 GO:0005886
GO:0016757
AF-A0A350UYC4-F1-model_v4 Glycosyltransferase 0.9765 10 191 GO:0005886
GO:0016757
AF-A0A7C4KIH1-F1-model_v4 Glycosyltransferase 0.9662 9 123 GO:0005886
GO:0016757
AF-A0A2N2SBJ6-F1-model_v4 Glycosyltransferase 0.9636 15 191 GO:0005886
GO:0016757

Feature Viewer

pLDDT pTM Quality
80.19 0.7 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map