F360620

General Info

Members Datasets Scaffolds Average Seq Length
249 189 498 382

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10000833|Ga0081539_1000083315
Length 424
Sequence MNATGRSAGGAAAGTREPATGGLMSVWDDVVGQEAAVAVLDRAARAASGGIGGDGPGVEASGMTHAWLLTGPPGSGRSTAARAFAAALQCPDAGCGTCHECRTALSGAHADVTLVATEHVQLRVDDVRPLVTLAQQRPAGGRWRVIVIEDADRLNDVSGNVLLKALEEPPPRTVWLLCAPSPEDVLPTIRSRCRRIGLRVPPPADVAALLVRRDGVDPALAAYAARAAQSHIGLARRLATDEGARIRRRDVLRLPGQLRGVGAAVLAAGQLVEVAGEESKAATGERDAAERADLLRSLGAEGAATLPPAVRAQVRQLEENQKRRATRAQRDVLDRALVDLLSLYRDVLMLQVGAASADEPAGGTGVVSLVNAELINELEGLARASTPEQSVRRMEAIGEARERIGANVAPLLAVEALMVQLRPR

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
34 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
52 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
75 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
76 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
77 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
78 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
79 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
80 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
81 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
82 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
83 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
84 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
85 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
86 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
87 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
99 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
100 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
115 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
116 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
162 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
169 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
170 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
171 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
172 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
173 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
174 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
175 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
176 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
177 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
178 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
179 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
180 2808606394 Promicromonospora sp. C35 Isolate Unclassified
181 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
182 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
183 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
184 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
185 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
186 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
187 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
188 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
189 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.76
Metatranscriptomes 0.8
Isolates 8.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.81
Nodule 0
Rhizoplane 6.43
Rhizosphere 79.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10000833 3300005985 Bacteria 59275
2 JGI24740J21852_10017855 3300001979 Bacteria 2529
3 JGI24737J22298_10007920 3300001990 Bacteria 3575
4 JGI25152J39213_1000335 3300002773 Bacteria 29846
5 JGI25151J46595_10009113 3300003187 Bacteria 4727
6 rootH2_10049943 3300003320 Bacteria 4232
7 Ga0070668_100128838 3300005347 Bacteria 2029
8 Ga0070663_100020019 3300005455 Bacteria 4421
9 Ga0070679_100032433 3300005530 Bacteria 5167
10 Ga0070679_100343786 3300005530 Bacteria 1440
11 Ga0070697_100014235 3300005536 Bacteria 6250
12 Ga0070665_100126060 3300005548 Bacteria 2563
13 Ga0068855_100021952 3300005563 Bacteria 7653
14 Ga0068854_100006968 3300005578 Bacteria 7210
15 Ga0068856_100228084 3300005614 Bacteria 1878
16 Ga0068852_100005627 3300005616 Bacteria 8988
17 Ga0068863_100214446 3300005841 Bacteria 1854
18 Ga0081455_10102609 3300005937 Bacteria 2292
19 Ga0081539_10010546 3300005985 Bacteria 7482
20 Ga0105244_10013311 3300009036 Bacteria 4815
21 Ga0105244_10029434 3300009036 Bacteria 2935
22 Ga0105240_10082476 3300009093 Bacteria 3949
23 Ga0105245_10091258 3300009098 Bacteria 2803
24 Ga0105241_10013221 3300009174 Bacteria 6050
25 Ga0105237_10052656 3300009545 Bacteria 4085
26 Ga0105238_10036333 3300009551 Bacteria 5007
27 Ga0105238_10281991 3300009551 Bacteria 1643
28 Ga0105246_10005419 3300011119 Bacteria 7769
29 Ga0105246_10022861 3300011119 Bacteria 4040
30 Ga0157370_10229561 3300013104 Bacteria 1718
31 Ga0157369_10005662 3300013105 Bacteria 14514
32 Ga0157369_10043469 3300013105 Bacteria 4897
33 Ga0157374_10083906 3300013296 Bacteria 3027
34 Ga0157372_10166274 3300013307 Bacteria 2551
35 Ga0163163_10041467 3300014325 Bacteria 4501
36 Ga0157377_10110103 3300014745 Bacteria 1654
37 Ga0206353_10116920 3300020082 Bacteria 2373
38 Ga0224712_10000876 3300022467 Bacteria 6445
39 Ga0207425_1007163 3300025245 Bacteria 2973
40 Ga0209129_1000112 3300025258 Bacteria 148742
41 Ga0209025_1000250 3300025294 Bacteria 126596
42 Ga0207647_10064856 3300025904 Bacteria 2218
43 Ga0207705_10002348 3300025909 Bacteria 14626
44 Ga0207695_10001544 3300025913 Bacteria 37922
45 Ga0207671_10000122 3300025914 Bacteria 119512
46 Ga0207657_10164340 3300025919 Bacteria 1801
47 Ga0207652_10029374 3300025921 Bacteria 4596
48 Ga0207694_10003715 3300025924 Bacteria 12091
49 Ga0207709_10034068 3300025935 Bacteria 2998
50 Ga0207689_10072686 3300025942 Bacteria 2825
51 Ga0207667_10036153 3300025949 Bacteria 5295
52 Ga0207678_10032637 3300026067 Bacteria 4537
53 Ga0207702_10202405 3300026078 Bacteria 1841
54 Ga0207683_10294803 3300026121 Bacteria 1483
55 Ga0207698_10264950 3300026142 Bacteria 1581
56 Ga0268266_10096238 3300028379 Bacteria 2601
57 Ga0265334_10001199 3300028573 Bacteria 12702
58 Ga0307517_10101025 3300028786 Bacteria 2274
59 Ga0307515_10217924 3300028794 Bacteria 1735
60 Ga0265340_10001883 3300031247 Bacteria 11950
61 Ga0307513_10000123 3300031456 Bacteria 108854
62 Ga0307408_100008044 3300031548 Bacteria 6971
63 Ga0307408_100020072 3300031548 Bacteria 4505
64 Ga0307408_100043093 3300031548 Bacteria 3210
65 Ga0307408_100118418 3300031548 Bacteria 2047
66 Ga0316579_10000125 3300031691 Bacteria 21049
67 Ga0307405_10060087 3300031731 Bacteria 2397
68 Ga0307405_10116725 3300031731 Bacteria 1818
69 Ga0307413_10064940 3300031824 Bacteria 2270
70 Ga0307410_10006867 3300031852 Bacteria 6181
71 Ga0307410_10047560 3300031852 Bacteria 2867
72 Ga0307406_10075704 3300031901 Bacteria 2221
73 Ga0307407_10022998 3300031903 Bacteria 3245
74 Ga0307412_10022586 3300031911 Bacteria 3859
75 Ga0307409_100155038 3300031995 Bacteria 1994
76 Ga0307416_100045934 3300032002 Bacteria 3443
77 Ga0307414_10142098 3300032004 Bacteria 1881
78 Ga0307415_100014774 3300032126 Bacteria 4602
79 Ga0307510_10051562 3300033180 Bacteria 4350
80 Ga0395899_0002613 3300037312 Bacteria 14527
81 Ga0395899_0033234 3300037312 Bacteria 3874
82 Ga0395899_0115018 3300037312 Bacteria 1931
83 Ga0395900_0028153 3300037418 Bacteria 5755
84 Ga0395900_0039234 3300037418 Bacteria 4879
85 Ga0395900_0123805 3300037418 Bacteria 2652
86 Ga0395898_0011750 3300037466 Bacteria 9077
87 Ga0395898_0040604 3300037466 Bacteria 4600
88 Ga0395898_0040757 3300037466 Bacteria 4590
89 Ga0395898_0516457 3300037466 Bacteria 1136
90 Ga0395905_0036637 3300037471 Bacteria 4608
91 Ga0395905_0048906 3300037471 Bacteria 3962
92 Ga0395901_0012739 3300038443 Bacteria 8531
93 Ga0395901_0183215 3300038443 Bacteria 2196
94 Ga0395901_0381292 3300038443 Bacteria 1451
95 Ga0400485_12178 3300038735 Bacteria 5975
96 Ga0400488_22886 3300038741 Bacteria 7348
97 Ga0400486_12115 3300038742 Bacteria 2657
98 Ga0400486_14206 3300038742 Bacteria 11118
99 Ga0436363_1558596 3300039450 Bacteria 1946
100 Ga0439438_014233 3300041405 Bacteria 2372
101 Ga0439439_0010454 3300041406 Bacteria 2219
102 Ga0451843_0275239 3300041509 Bacteria 3089
103 Ga0451853_3366934 3300041512 Bacteria 1896
104 Ga0439433_0001175 3300041999 Bacteria 5369
105 Ga0439442_000041 3300042002 Bacteria 29264
106 Ga0439442_000269 3300042002 Bacteria 12687
107 Ga0439452_006423 3300042010 Bacteria 3683
108 Ga0439457_000304 3300042014 Bacteria 13579
109 Ga0450908_000671 3300042184 Bacteria 6596
110 Ga0450909_001349 3300042185 Bacteria 3411
111 Ga0439434_0000784 3300042435 Bacteria 9149
112 Ga0466969_0000150 3300044656 Bacteria 37676
113 Ga0466969_0056925 3300044656 Bacteria 1907
114 Ga0466965_0007570 3300044683 Bacteria 4995
115 Ga0466965_0052538 3300044683 Bacteria 2024
116 Ga0466961_0016860 3300044693 Bacteria 4694
117 Ga0466963_0073168 3300044694 Bacteria 2310
118 Ga0466971_0049294 3300044719 Bacteria 1895
119 Ga0466970_0010764 3300044765 Bacteria 4650
120 Ga0466959_0000562 3300045049 Bacteria 21561
121 Ga0466959_0111490 3300045049 Bacteria 1952
122 Ga0466958_0028583 3300045836 Bacteria 3306
123 Ga0466967_0158184 3300045976 Bacteria 2125
124 Ga0466967_0321783 3300045976 Bacteria 1492
125 Ga0466967_0346295 3300045976 Bacteria 1438
126 Ga0466967_0477589 3300045976 Bacteria 1221
127 Ga0495627_018818 3300046453 Bacteria 2323
128 Ga0495592_0066478 3300046454 Bacteria 2638
129 Ga0495641_0060647 3300046461 Bacteria 1709
130 Ga0495651_0000402 3300046462 Bacteria 33417
131 Ga0495580_0027874 3300046472 Bacteria 4108
132 Ga0495582_0068700 3300046473 Bacteria 1958
133 Ga0495585_0021051 3300046492 Bacteria 3746
134 Ga0495618_0080593 3300046514 Bacteria 2077
135 Ga0495628_0014246 3300046516 Bacteria 6671
136 Ga0495628_0107348 3300046516 Bacteria 2149
137 Ga0495652_0000199 3300046529 Bacteria 69104
138 Ga0495652_0003205 3300046529 Bacteria 16313
139 Ga0495640_0142265 3300046533 Bacteria 1546
140 Ga0495645_0027682 3300046543 Bacteria 4118
141 Ga0495622_0024107 3300046557 Bacteria 2840
142 Ga0495667_0102116 3300046559 Bacteria 1855
143 Ga0495635_0004388 3300046663 Bacteria 9771
144 Ga0495657_0245361 3300046675 Bacteria 1080
145 Ga0495600_0010894 3300046809 Bacteria 5655
146 Ga0495604_0027468 3300047317 Bacteria 4526
147 Ga0495672_0083577 3300047320 Bacteria 1773
148 Ga0495602_0016884 3300048088 Bacteria 7326
149 Ga0496102_0178506 3300048905 Bacteria 2000
150 Ga0496103_0023407 3300048906 Bacteria 3724
151 Ga0496104_0048432 3300048907 Bacteria 4007
152 Ga0496108_0010959 3300048911 Bacteria 7363
153 Ga0496108_0054414 3300048911 Bacteria 3358
154 Ga0496109_0047601 3300048912 Bacteria 3899
155 Ga0496110_0025882 3300048913 Bacteria 5017
156 Ga0496110_0089222 3300048913 Bacteria 2755
157 Ga0496111_0003930 3300048914 Bacteria 9320
158 Ga0496111_0015256 3300048914 Bacteria 5270
159 Ga0496112_0019113 3300048915 Bacteria 6458
160 Ga0496112_0039948 3300048915 Bacteria 4586
161 Ga0496112_0056955 3300048915 Bacteria 3848
162 Ga0496113_0014484 3300048916 Bacteria 5382
163 Ga0496113_0230403 3300048916 Bacteria 1477
164 Ga0496114_0285476 3300048917 Bacteria 1456
165 Ga0496117_0009615 3300048920 Bacteria 8952
166 Ga0496118_0046795 3300048921 Bacteria 3360
167 Ga0496119_0041804 3300048922 Bacteria 2914
168 Ga0496122_0000583 3300048925 Bacteria 74712
169 Ga0496125_0000069 3300048928 Bacteria 246981
170 Ga0496125_0001310 3300048928 Bacteria 36829
171 Ga0496126_0015792 3300048929 Bacteria 7584
172 Ga0501031_0020074 3300049568 Bacteria 4355
173 Ga0501031_0022240 3300049568 Bacteria 4131
174 Ga0501032_0003866 3300049569 Bacteria 11370
175 Ga0501032_0140368 3300049569 Bacteria 1591
176 Ga0501033_0034455 3300049570 Bacteria 3798
177 Ga0501033_0070536 3300049570 Bacteria 2567
178 Ga0501034_0003523 3300049571 Bacteria 17774
179 Ga0501034_0071286 3300049571 Bacteria 3485
180 Ga0501036_0006977 3300049572 Bacteria 9192
181 Ga0501036_0366525 3300049572 Bacteria 1203
182 Ga0501037_0007249 3300049573 Bacteria 8102
183 Ga0501037_0043249 3300049573 Bacteria 3311
184 Ga0501038_0004127 3300049574 Bacteria 13516
185 Ga0501038_0014635 3300049574 Bacteria 7149
186 Ga0501039_0124528 3300049575 Bacteria 2021
187 Ga0501040_0006209 3300049576 Bacteria 7751
188 Ga0501040_0011472 3300049576 Bacteria 5802
189 Ga0501042_0012729 3300049578 Bacteria 5707
190 Ga0501042_0036852 3300049578 Bacteria 3470
191 Ga0501046_0021815 3300049580 Bacteria 5279
192 Ga0501046_0112022 3300049580 Bacteria 2084
193 Ga0501047_0000016 3300049581 Bacteria 284621
194 Ga0501047_0016587 3300049581 Bacteria 7033
195 Ga0501048_0017462 3300049582 Bacteria 5284
196 Ga0501048_0030299 3300049582 Bacteria 3914
197 Ga0501068_0050694 3300049584 Bacteria 2509
198 Ga0501071_0003893 3300049587 Bacteria 9407
199 Ga0501071_0013801 3300049587 Bacteria 5513
200 Ga0501072_0015705 3300049588 Bacteria 5803
201 Ga0501073_0117895 3300049589 Bacteria 1840
202 Ga0501073_0186156 3300049589 Bacteria 1437
203 Ga0501074_0031737 3300049590 Bacteria 3827
204 Ga0501075_0029543 3300049591 Bacteria 4054
205 Ga0501075_0043199 3300049591 Bacteria 3380
206 Ga0501075_0138520 3300049591 Bacteria 1854
207 Ga0501076_0029753 3300049592 Bacteria 4249
208 Ga0501077_0027407 3300049593 Bacteria 3618
209 Ga0501079_0037365 3300049741 Bacteria 3743
210 Ga0501080_0035437 3300049742 Bacteria 4657
211 Ga0501035_0050864 3300049822 Bacteria 3712
212 Ga0501044_0023291 3300049823 Bacteria 6588
213 Ga0501044_0139449 3300049823 Bacteria 2413
214 Ga0501045_0011761 3300049824 Bacteria 6150
215 Ga0501045_0034729 3300049824 Bacteria 3661
216 Ga0495601_0035001 3300053077 Bacteria 3133
217 Ga0495601_0117448 3300053077 Bacteria 1726
218 Ga0495612_0002993 3300053078 Bacteria 7012
219 Ga0495655_0003270 3300053083 Bacteria 2658
220 Ga0495619_0111746 3300053085 Bacteria 1868
221 Ga0500616_0000349 3300053153 Bacteria 65897
222 Ga0500616_0000770 3300053153 Bacteria 36895
223 Ga0501084_0016521 3300054114 Bacteria 6129
224 Ga0501082_0024291 3300060353 Bacteria 5225
225 Ga0501082_0191990 3300060353 Bacteria 1776
226 Ga0466962_0000070 3300061719 Bacteria 42462
227 Ga0530510_0016709 3300061734 Bacteria 5195
228 Ga0530510_0019520 3300061734 Bacteria 4812
229 2555231911 2554235227 Bacteria 3637389
230 2655031362 2654587600 Bacteria 3911798
231 2729906872 2728369276 Bacteria 5610032
232 2731907301 2731639228 Bacteria 4187555
233 2738697084 2738541272 Bacteria 6848551
234 2739324252 2738543027 Bacteria 6409078
235 2739607089 2739367654 Bacteria 6049412
236 2760305009 2758568522 Bacteria 5953541
237 2760621163 2758568621 Bacteria 5967089
238 2799186564 2799112218 Bacteria 4315149
239 2808872735 2808606365 Bacteria 4301966
240 2809025964 2808606394 Bacteria 6248540
241 2810363076 2808606700 Bacteria 3482157
242 2816422858 2816332119 Bacteria 8120218
243 2839989058 2839986021 Bacteria 3685650
244 2844851629 2844849076 Bacteria 4091819
245 2887445539 2887443736 Bacteria 4426037
246 2919054759 2919051321 Bacteria 4210889
247 2932431190 2932431166 Bacteria 4215299
248 2945944562 2945941187 Bacteria 4682474
249 8056579953 8056579771 Bacteria 5840325
250 Ga0081539_10000833
251 JGI24740J21852_10017855
252 JGI24737J22298_10007920
253 JGI25152J39213_1000335
254 JGI25151J46595_10009113
255 rootH2_10049943
256 Ga0070668_100128838
257 Ga0070663_100020019
258 Ga0070679_100032433
259 Ga0070679_100343786
260 Ga0070697_100014235
261 Ga0070665_100126060
262 Ga0068855_100021952
263 Ga0068854_100006968
264 Ga0068856_100228084
265 Ga0068852_100005627
266 Ga0068863_100214446
267 Ga0081455_10102609
268 Ga0081539_10010546
269 Ga0105244_10013311
270 Ga0105244_10029434
271 Ga0105240_10082476
272 Ga0105245_10091258
273 Ga0105241_10013221
274 Ga0105237_10052656
275 Ga0105238_10036333
276 Ga0105238_10281991
277 Ga0105246_10005419
278 Ga0105246_10022861
279 Ga0157370_10229561
280 Ga0157369_10005662
281 Ga0157369_10043469
282 Ga0157374_10083906
283 Ga0157372_10166274
284 Ga0163163_10041467
285 Ga0157377_10110103
286 Ga0206353_10116920
287 Ga0224712_10000876
288 Ga0207425_1007163
289 Ga0209129_1000112
290 Ga0209025_1000250
291 Ga0207647_10064856
292 Ga0207705_10002348
293 Ga0207695_10001544
294 Ga0207671_10000122
295 Ga0207657_10164340
296 Ga0207652_10029374
297 Ga0207694_10003715
298 Ga0207709_10034068
299 Ga0207689_10072686
300 Ga0207667_10036153
301 Ga0207678_10032637
302 Ga0207702_10202405
303 Ga0207683_10294803
304 Ga0207698_10264950
305 Ga0268266_10096238
306 Ga0265334_10001199
307 Ga0307517_10101025
308 Ga0307515_10217924
309 Ga0265340_10001883
310 Ga0307513_10000123
311 Ga0307408_100008044
312 Ga0307408_100020072
313 Ga0307408_100043093
314 Ga0307408_100118418
315 Ga0316579_10000125
316 Ga0307405_10060087
317 Ga0307405_10116725
318 Ga0307413_10064940
319 Ga0307410_10006867
320 Ga0307410_10047560
321 Ga0307406_10075704
322 Ga0307407_10022998
323 Ga0307412_10022586
324 Ga0307409_100155038
325 Ga0307416_100045934
326 Ga0307414_10142098
327 Ga0307415_100014774
328 Ga0307510_10051562
329 Ga0395899_0002613
330 Ga0395899_0033234
331 Ga0395899_0115018
332 Ga0395900_0028153
333 Ga0395900_0039234
334 Ga0395900_0123805
335 Ga0395898_0011750
336 Ga0395898_0040604
337 Ga0395898_0040757
338 Ga0395898_0516457
339 Ga0395905_0036637
340 Ga0395905_0048906
341 Ga0395901_0012739
342 Ga0395901_0183215
343 Ga0395901_0381292
344 Ga0400485_12178
345 Ga0400488_22886
346 Ga0400486_12115
347 Ga0400486_14206
348 Ga0436363_1558596
349 Ga0439438_014233
350 Ga0439439_0010454
351 Ga0451843_0275239
352 Ga0451853_3366934
353 Ga0439433_0001175
354 Ga0439442_000041
355 Ga0439442_000269
356 Ga0439452_006423
357 Ga0439457_000304
358 Ga0450908_000671
359 Ga0450909_001349
360 Ga0439434_0000784
361 Ga0466969_0000150
362 Ga0466969_0056925
363 Ga0466965_0007570
364 Ga0466965_0052538
365 Ga0466961_0016860
366 Ga0466963_0073168
367 Ga0466971_0049294
368 Ga0466970_0010764
369 Ga0466959_0000562
370 Ga0466959_0111490
371 Ga0466958_0028583
372 Ga0466967_0158184
373 Ga0466967_0321783
374 Ga0466967_0346295
375 Ga0466967_0477589
376 Ga0495627_018818
377 Ga0495592_0066478
378 Ga0495641_0060647
379 Ga0495651_0000402
380 Ga0495580_0027874
381 Ga0495582_0068700
382 Ga0495585_0021051
383 Ga0495618_0080593
384 Ga0495628_0014246
385 Ga0495628_0107348
386 Ga0495652_0000199
387 Ga0495652_0003205
388 Ga0495640_0142265
389 Ga0495645_0027682
390 Ga0495622_0024107
391 Ga0495667_0102116
392 Ga0495635_0004388
393 Ga0495657_0245361
394 Ga0495600_0010894
395 Ga0495604_0027468
396 Ga0495672_0083577
397 Ga0495602_0016884
398 Ga0496102_0178506
399 Ga0496103_0023407
400 Ga0496104_0048432
401 Ga0496108_0010959
402 Ga0496108_0054414
403 Ga0496109_0047601
404 Ga0496110_0025882
405 Ga0496110_0089222
406 Ga0496111_0003930
407 Ga0496111_0015256
408 Ga0496112_0019113
409 Ga0496112_0039948
410 Ga0496112_0056955
411 Ga0496113_0014484
412 Ga0496113_0230403
413 Ga0496114_0285476
414 Ga0496117_0009615
415 Ga0496118_0046795
416 Ga0496119_0041804
417 Ga0496122_0000583
418 Ga0496125_0000069
419 Ga0496125_0001310
420 Ga0496126_0015792
421 Ga0501031_0020074
422 Ga0501031_0022240
423 Ga0501032_0003866
424 Ga0501032_0140368
425 Ga0501033_0034455
426 Ga0501033_0070536
427 Ga0501034_0003523
428 Ga0501034_0071286
429 Ga0501036_0006977
430 Ga0501036_0366525
431 Ga0501037_0007249
432 Ga0501037_0043249
433 Ga0501038_0004127
434 Ga0501038_0014635
435 Ga0501039_0124528
436 Ga0501040_0006209
437 Ga0501040_0011472
438 Ga0501042_0012729
439 Ga0501042_0036852
440 Ga0501046_0021815
441 Ga0501046_0112022
442 Ga0501047_0000016
443 Ga0501047_0016587
444 Ga0501048_0017462
445 Ga0501048_0030299
446 Ga0501068_0050694
447 Ga0501071_0003893
448 Ga0501071_0013801
449 Ga0501072_0015705
450 Ga0501073_0117895
451 Ga0501073_0186156
452 Ga0501074_0031737
453 Ga0501075_0029543
454 Ga0501075_0043199
455 Ga0501075_0138520
456 Ga0501076_0029753
457 Ga0501077_0027407
458 Ga0501079_0037365
459 Ga0501080_0035437
460 Ga0501035_0050864
461 Ga0501044_0023291
462 Ga0501044_0139449
463 Ga0501045_0011761
464 Ga0501045_0034729
465 Ga0495601_0035001
466 Ga0495601_0117448
467 Ga0495612_0002993
468 Ga0495655_0003270
469 Ga0495619_0111746
470 Ga0500616_0000349
471 Ga0500616_0000770
472 Ga0501084_0016521
473 Ga0501082_0024291
474 Ga0501082_0191990
475 Ga0466962_0000070
476 Ga0530510_0016709
477 Ga0530510_0019520
478 2555231911
479 2655031362
480 2729906872
481 2731907301
482 2738697084
483 2739324252
484 2739607089
485 2760305009
486 2760621163
487 2799186564
488 2808872735
489 2809025964
490 2810363076
491 2816422858
492 2839989058
493 2844851629
494 2887445539
495 2919054759
496 2932431190
497 2945944562
498 8056579953

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

57

202

0.97

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

67

200

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.8392 6 209
3glf-assembly1.cif.gz_E crystal structure of the ecoli clamp loader bound to primer-template dna 0.7723 14 352
1a5t-assembly1.cif.gz_A-2 crystal structure of the delta prime subunit of the clamp-loader complex of escherichia coli dna polymerase iii 0.7549 11 352
3glf-assembly1.cif.gz_E crystal structure of the ecoli clamp loader bound to primer-template dna 0.7485 14 352
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.747 5 211
ID Description Score Start End Superfamily
af_O06363_3_179_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9511 3 162 3.40.50.300
af_Q2G2X1_1_121_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9056 42 160 3.40.50.300
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9005 6 163 3.40.50.300
af_F4JRP8_232_412_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.886 4 162 3.40.50.300
af_O06363_3_179_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8572 3 162 3.40.50.300
ID Description Score Start End GO Terms
AF-X7XQN1-F1-model_v4 deleted 0.9745 27 199
AF-A0A537YA41-F1-model_v4 DNA polymerase III subunit delta (EC 2.7.7.7) 0.9599 3 163 GO:0003887
GO:0005524
GO:0006261
GO:0008408
GO:0016887
AF-A0A1C5G0D5-F1-model_v4 DNA polymerase-3 subunit delta 0.9497 1 233 GO:0006261
GO:0016887
AF-A0A352NGR5-F1-model_v4 DNA polymerase III subunit delta 0.9471 65 158 GO:0006261
GO:0016740
AF-A0A6J6N4S3-F1-model_v4 Unannotated protein 0.9303 160 341 GO:0003677
GO:0003887
GO:0006260
GO:0009360

Map