F360337

General Info

Members Datasets Scaffolds Average Seq Length
248 203 198 404

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2902330777|2902335406
Length 454
Sequence TLPCPGRMQRQRNAIREPARDAPRSGFHVSPLATVPPLTGPACLPLSGRMPQDRDEIAIVGGGPAGLAAAEVLGEAGCAVTVYERMPSVARKLLIAGRGGLNITHSETRPDFLARYHPPGYLDAAIAAFPPEALRDWCAELGEPTFVGSSGRVFPRSFKASPLLRGWLARLERLGVRFRTRHRLTALGAALTFETPDGPLEIRPRATLLALGGASWPRLGSDGRWVPLLEGLGVAVAPLRPANVGFAVAWSDLFRQRFAGAPLKRIALACDGASARGEAVITQDGLEGGAVYALSRTLREAIAARGSAELVIDLRPDLTQDALARRLSGARPGDSVATRLRKAAGLPPVAASLLREAADATLPADPGALAGLIKAAPLTLTAPVPIERAISTAGGVRLDAIDGRSMLRAHPGLFLAGEMLDWEAPTGGYLLQGAIAGGRAAAAGMLDWLAETGG

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2534681786 Brucella suis 92/29 Isolate Unclassified
3 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
4 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
5 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
6 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
7 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
8 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
9 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
10 2643221733 Bosea sp. Root381 Isolate Unclassified
11 2643221736 Bosea sp. Root483D1 Isolate Unclassified
12 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
13 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
14 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
15 2791355266 Rhizobium sp. L43 Isolate Nodule
16 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
17 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
18 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
19 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
20 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
21 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
22 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
23 2841760612 Bosea sp. Tri-49 Isolate Nodule
24 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
25 2844104063 Bosea sp. Tri-39 Isolate Nodule
26 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
27 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
28 2851182111 Bosea sp. Tri-44 Isolate Nodule
29 2851246043 Bosea sp. Tri-54 Isolate Nodule
30 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
31 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
32 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
33 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
34 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
35 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
36 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
37 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
38 2902330777 Methylobacterium sp. 2A Isolate Unclassified
39 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
40 2909042592 Labrys sp. LIt4 Isolate Nodule
41 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
42 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
43 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
44 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
45 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
46 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
47 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
48 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
49 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
50 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
51 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
52 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
53 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
54 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
55 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
56 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
57 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
58 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
59 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
60 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
61 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
62 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
63 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
64 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
65 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
66 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
67 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
68 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
77 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
78 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
79 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
80 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
116 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
117 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
133 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
134 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
138 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
139 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
140 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
145 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
146 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
147 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
148 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
149 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
152 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
153 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
154 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
155 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
161 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
164 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
168 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
169 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
173 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
176 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
189 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
190 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
191 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
192 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
193 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
194 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
195 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
196 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
197 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
198 641522639 Methylobacterium sp. 4-46 Isolate Nodule
199 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
200 8005395548 Rhizobium sp. R339 Isolate Nodule
201 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
202 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
203 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.84
Metatranscriptomes 0
Isolates 20.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.66
Nodule 7.66
Rhizoplane 4.44
Rhizosphere 65.73
Stem 0
Stem Tuber 0
Unclassified 14.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10008556 3300001979 Bacteria 4067
2 JGI24737J22298_10006707 3300001990 Bacteria 3918
3 JGI25153J46596_10005709 3300003215 Bacteria 6489
4 Ga0065165_1000229 3300005262 Bacteria 98699
5 Ga0070660_100000912 3300005339 Bacteria 19744
6 Ga0070668_100128159 3300005347 Bacteria 2034
7 Ga0070668_100160976 3300005347 Bacteria 1821
8 Ga0070659_100018571 3300005366 Bacteria 5248
9 Ga0070709_10000351 3300005434 Bacteria 28490
10 Ga0070714_100028075 3300005435 Bacteria 4665
11 Ga0070713_100012806 3300005436 Bacteria 6166
12 Ga0070662_100168489 3300005457 Bacteria 1718
13 Ga0068853_100024941 3300005539 Bacteria 5017
14 Ga0068853_100250638 3300005539 Bacteria 1624
15 Ga0068855_100021773 3300005563 Bacteria 7688
16 Ga0068855_100095666 3300005563 Bacteria 3423
17 Ga0068855_100200498 3300005563 Bacteria 2246
18 Ga0068857_100019791 3300005577 Bacteria 5913
19 Ga0068854_100004354 3300005578 Bacteria 8926
20 Ga0068856_100000020 3300005614 Bacteria 146775
21 Ga0068856_100041176 3300005614 Bacteria 4539
22 Ga0068856_100221305 3300005614 Bacteria 1908
23 Ga0068861_100034175 3300005719 Bacteria 3758
24 Ga0068851_10006597 3300005834 Bacteria 5306
25 Ga0068851_10099639 3300005834 Bacteria 1540
26 Ga0068860_100222807 3300005843 Bacteria 1832
27 Ga0068862_100225457 3300005844 Bacteria 1698
28 Ga0075365_10000985 3300006038 Bacteria 12143
29 Ga0070716_100003029 3300006173 Bacteria 7838
30 Ga0070712_100055217 3300006175 Bacteria 2781
31 Ga0075369_10027200 3300006186 Bacteria 2390
32 Ga0105240_10009843 3300009093 Bacteria 13490
33 Ga0105240_10012471 3300009093 Bacteria 11727
34 Ga0105240_10019475 3300009093 Bacteria 9064
35 Ga0105240_10097862 3300009093 Bacteria 3575
36 Ga0105240_10426839 3300009093 Bacteria 1488
37 Ga0105241_10002167 3300009174 Bacteria 14788
38 Ga0105237_10109050 3300009545 Bacteria 2760
39 Ga0105238_10004236 3300009551 Bacteria 14251
40 Ga0105238_10011608 3300009551 Bacteria 8874
41 Ga0105239_10009220 3300010375 Bacteria 11161
42 Ga0105239_10018869 3300010375 Bacteria 7620
43 Ga0157370_10018817 3300013104 Bacteria 6945
44 Ga0157374_10164594 3300013296 Bacteria 2161
45 Ga0183365_10001 3300015684 Bacteria 2090444
46 Ga0214544_1000002 3300021320 Bacteria 753857
47 Ga0214542_1000001 3300021321 Bacteria 1018696
48 Ga0214545_1000001 3300021324 Bacteria 1092817
49 Ga0214545_1020981 3300021324 Bacteria 5034
50 Ga0214543_1000001 3300021327 Bacteria 776921
51 Ga0209673_1009366 3300025273 Bacteria 4250
52 Ga0209130_1000045 3300025284 Bacteria 240278
53 Ga0209025_1002792 3300025294 Bacteria 17614
54 Ga0209564_1000074 3300025295 Bacteria 286043
55 Ga0209758_1000321 3300025297 Bacteria 92591
56 Ga0209758_1012231 3300025297 Bacteria 4829
57 Ga0207656_10010346 3300025321 Bacteria 3493
58 Ga0207692_10000560 3300025898 Bacteria 13239
59 Ga0207647_10008784 3300025904 Bacteria 7213
60 Ga0207699_10000274 3300025906 Bacteria 28351
61 Ga0207645_10062515 3300025907 Bacteria 2379
62 Ga0207695_10005095 3300025913 Bacteria 17608
63 Ga0207695_10028431 3300025913 Bacteria 6200
64 Ga0207695_10035791 3300025913 Bacteria 5378
65 Ga0207695_10287498 3300025913 Bacteria 1537
66 Ga0207693_10025558 3300025915 Bacteria 4681
67 Ga0207663_10001335 3300025916 Bacteria 11419
68 Ga0207657_10004545 3300025919 Bacteria 14660
69 Ga0207652_10107161 3300025921 Bacteria 2475
70 Ga0207694_10000050 3300025924 Bacteria 159920
71 Ga0207694_10046521 3300025924 Bacteria 3354
72 Ga0207700_10067548 3300025928 Bacteria 2737
73 Ga0207690_10034474 3300025932 Bacteria 3262
74 Ga0207706_10151819 3300025933 Bacteria 2037
75 Ga0207665_10005784 3300025939 Bacteria 8223
76 Ga0207679_10056366 3300025945 Bacteria 2901
77 Ga0207667_10033588 3300025949 Bacteria 5514
78 Ga0207667_10104848 3300025949 Bacteria 2916
79 Ga0207667_10206028 3300025949 Bacteria 2017
80 Ga0207640_10007948 3300025981 Bacteria 5855
81 Ga0207658_10149743 3300025986 Bacteria 1900
82 Ga0207639_10014444 3300026041 Bacteria 5555
83 Ga0207639_10042449 3300026041 Bacteria 3408
84 Ga0207678_10036164 3300026067 Bacteria 4299
85 Ga0207702_10000002 3300026078 Bacteria 491507
86 Ga0207702_10303719 3300026078 Bacteria 1515
87 Ga0207641_10078882 3300026088 Bacteria 2853
88 Ga0207674_10003205 3300026116 Bacteria 20153
89 Ga0207674_10003611 3300026116 Bacteria 18863
90 Ga0207675_100242873 3300026118 Bacteria 1740
91 Ga0268266_10170546 3300028379 Bacteria 1975
92 Ga0265340_10005011 3300031247 Bacteria 7364
93 Ga0265313_10039669 3300031595 Bacteria 2334
94 Ga0265314_10000857 3300031711 Bacteria 36107
95 Ga0316583_10001216 3300032133 Bacteria 8471
96 Ga0373957_0003761 3300035120 Bacteria 4543
97 Ga0373943_0066160 3300035170 Bacteria 1819
98 Ga0373935_0033773 3300035692 Bacteria 3186
99 Ga0373947_0028338 3300035725 Bacteria 3283
100 Ga0395899_0000013 3300037312 Bacteria 510397
101 Ga0395899_0026410 3300037312 Bacteria 4382
102 Ga0395898_0012056 3300037466 Bacteria 8948
103 Ga0395905_0014005 3300037471 Bacteria 7672
104 Ga0395901_0149727 3300038443 Bacteria 2453
105 Ga0436361_0036466 3300039447 Bacteria 7664
106 Ga0436361_0754791 3300039447 Bacteria 1904
107 Ga0436361_0889363 3300039447 Bacteria 2969
108 Ga0466957_0057575 3300044842 Bacteria 2379
109 Ga0466959_0007887 3300045049 Bacteria 7495
110 Ga0495603_0124347 3300046455 Bacteria 1503
111 Ga0495629_0023802 3300046459 Bacteria 4361
112 Ga0495629_0166566 3300046459 Bacteria 1530
113 Ga0495638_0000084 3300046460 Bacteria 153168
114 Ga0495651_0000528 3300046462 Bacteria 29605
115 Ga0495650_0000001 3300046471 Bacteria 1085492
116 Ga0495650_0016526 3300046471 Bacteria 3735
117 Ga0495662_0011116 3300046476 Bacteria 4398
118 Ga0495664_0010160 3300046477 Bacteria 5282
119 Ga0495664_0014784 3300046477 Bacteria 4431
120 Ga0495664_0017953 3300046477 Bacteria 4046
121 Ga0495594_0018804 3300046499 Bacteria 3665
122 Ga0495594_0062442 3300046499 Bacteria 2063
123 Ga0495606_0127832 3300046507 Bacteria 1514
124 Ga0495608_0026167 3300046511 Bacteria 3980
125 Ga0495666_0017955 3300046526 Bacteria 3522
126 Ga0495642_0070956 3300046528 Bacteria 1457
127 Ga0495652_0018047 3300046529 Bacteria 6294
128 Ga0495652_0103705 3300046529 Bacteria 2302
129 Ga0495665_0003160 3300046531 Bacteria 8914
130 Ga0495640_0014517 3300046533 Bacteria 5955
131 Ga0495640_0189971 3300046533 Bacteria 1306
132 Ga0495587_0001231 3300046536 Bacteria 16965
133 Ga0495645_0055315 3300046543 Bacteria 2881
134 Ga0495622_0015027 3300046557 Bacteria 3598
135 Ga0495633_0066251 3300046558 Bacteria 1687
136 Ga0495667_0019969 3300046559 Bacteria 4519
137 Ga0495634_0076083 3300046642 Bacteria 2204
138 Ga0495635_0130431 3300046663 Bacteria 1713
139 Ga0495657_0003048 3300046675 Bacteria 13866
140 Ga0495657_0033244 3300046675 Bacteria 3592
141 Ga0495599_0050459 3300046678 Bacteria 2607
142 Ga0495623_0024226 3300046679 Bacteria 3913
143 Ga0495646_0022521 3300046680 Bacteria 3973
144 Ga0495613_0074737 3300046689 Bacteria 2468
145 Ga0495624_0007511 3300046690 Bacteria 7647
146 Ga0495600_0003916 3300046809 Bacteria 8842
147 Ga0495600_0009487 3300046809 Bacteria 6016
148 Ga0495604_0005833 3300047317 Bacteria 9761
149 Ga0495604_0138757 3300047317 Bacteria 1739
150 Ga0495636_0014165 3300047318 Bacteria 3171
151 Ga0495674_0038333 3300047319 Bacteria 4302
152 Ga0495680_0002256 3300047322 Bacteria 19869
153 Ga0495602_0088041 3300048088 Bacteria 2586
154 Ga0495626_0002405 3300048091 Bacteria 13041
155 Ga0496104_0053045 3300048907 Bacteria 3831
156 Ga0496106_0000587 3300048909 Bacteria 25963
157 Ga0496108_0000517 3300048911 Bacteria 30206
158 Ga0496109_0000814 3300048912 Bacteria 26012
159 Ga0496109_0326634 3300048912 Bacteria 1448
160 Ga0496110_0025071 3300048913 Bacteria 5092
161 Ga0496113_0059889 3300048916 Bacteria 2869
162 Ga0496114_0168330 3300048917 Bacteria 1909
163 Ga0496115_0007024 3300048918 Bacteria 8273
164 Ga0496117_0046027 3300048920 Bacteria 3143
165 Ga0496119_0003049 3300048922 Bacteria 17727
166 Ga0496122_0022096 3300048925 Bacteria 5668
167 Ga0496122_0027877 3300048925 Bacteria 4815
168 Ga0496123_0035566 3300048926 Bacteria 3546
169 Ga0496126_0046824 3300048929 Bacteria 3963
170 Ga0496126_0131509 3300048929 Bacteria 2162
171 Ga0495678_008746 3300049459 Bacteria 5074
172 Ga0501032_0003177 3300049569 Bacteria 12642
173 Ga0501033_0003864 3300049570 Bacteria 12177
174 Ga0501034_0130543 3300049571 Bacteria 2496
175 Ga0501034_0167451 3300049571 Bacteria 2166
176 Ga0501038_0223654 3300049574 Bacteria 1501
177 Ga0501046_0000270 3300049580 Bacteria 52923
178 Ga0501047_0119857 3300049581 Bacteria 2513
179 Ga0501047_0147300 3300049581 Bacteria 2231
180 Ga0501047_0293068 3300049581 Bacteria 1471
181 Ga0501069_0098128 3300049585 Bacteria 1661
182 Ga0501070_0083513 3300049586 Bacteria 2644
183 Ga0501073_0013428 3300049589 Bacteria 5957
184 Ga0501080_0117580 3300049742 Bacteria 2464
185 Ga0501083_0002552 3300049744 Bacteria 12509
186 Ga0501035_0374971 3300049822 Bacteria 1187
187 Ga0501044_0075385 3300049823 Bacteria 3425
188 Ga0501044_0079371 3300049823 Bacteria 3325
189 Ga0501044_0216130 3300049823 Bacteria 1869
190 nmdc:mga03n38_61189_c1 3300050490 Bacteria 1714
191 Ga0500646_0032111 3300053090 Bacteria 1448
192 Ga0500556_0000071 3300053104 Bacteria 100768
193 Ga0500562_000910 3300053108 Bacteria 7176
194 Ga0500593_000095 3300053117 Bacteria 33178
195 Ga0500595_008872 3300053119 Bacteria 4086
196 Ga0500608_000718 3300053122 Bacteria 12157
197 Ga0500568_0000200 3300053139 Bacteria 52499
198 Ga0500601_001801 3300053737 Bacteria 2299

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2957422303 2957426621 343
2 3300046528 Ga0495642_0070956 Ga0495642_0070956_38_1114 353
3 3300048925 Ga0496122_0022096 Ga0496122_0022096_216_1520 360
4 3300048926 Ga0496123_0035566 Ga0496123_0035566_137_1441 360
5 3300005843 Ga0068860_100222807 Ga0068860_1002228072 362
6 3300028379 Ga0268266_10170546 Ga0268266_101705463 362
7 3300049822 Ga0501035_0374971 Ga0501035_0374971_17_1117 366
8 3300048922 Ga0496119_0003049 Ga0496119_0003049_8709_9926 369
9 3300053104 Ga0500556_0000071 Ga0500556_0000071_3779_4999 369
10 3300025907 Ga0207645_10062515 Ga0207645_100625153 373
11 3300046455 Ga0495603_0124347 Ga0495603_0124347_50_1225 375
12 3300031247 Ga0265340_10005011 Ga0265340_100050113 376
13 3300025986 Ga0207658_10149743 Ga0207658_101497432 377
14 3300013296 Ga0157374_10164594 Ga0157374_101645942 378
15 3300046533 Ga0495640_0189971 Ga0495640_0189971_26_1222 378
16 3300009093 Ga0105240_10426839 Ga0105240_104268391 379
17 3300048912 Ga0496109_0326634 Ga0496109_0326634_158_1390 379
18 3300009093 Ga0105240_10019475 Ga0105240_100194758 380
19 3300025913 Ga0207695_10028431 Ga0207695_100284314 380
20 3300046499 Ga0495594_0062442 Ga0495594_0062442_250_1452 382
21 3300009093 Ga0105240_10097862 Ga0105240_100978623 383
22 3300039447 Ga0436361_0754791 Ga0436361_0754791_121_1275 384
23 iso_pu_bacteria 2824609381 2824610395 384
24 iso_pu_bacteria 2824653114 2824659410 384
25 3300039447 Ga0436361_0889363 Ga0436361_0889363_1449_2606 385
26 3300013104 Ga0157370_10018817 Ga0157370_100188173 386
27 3300015684 Ga0183365_10001 Ga0183365_100011653 386
28 3300053122 Ga0500608_000718 Ga0500608_000718_6924_8096 387
29 iso_pu_bacteria 2617270741 2617375515 387
30 iso_pu_bacteria 2824732956 2824733319 387
31 iso_pu_bacteria 2824746037 2824746554 387
32 iso_pu_bacteria 2829745981 2829746839 387
33 3300053117 Ga0500593_000095 Ga0500593_000095_3189_4388 388
34 iso_pu_bacteria 2824600985 2824604126 388
35 iso_pu_bacteria 2888419890 2888424770 388
36 3300005347 Ga0070668_100128159 Ga0070668_1001281591 390
37 3300005366 Ga0070659_100018571 Ga0070659_1000185714 391
38 3300021324 Ga0214545_1020981 Ga0214545_10209813 391
39 3300025919 Ga0207657_10004545 Ga0207657_1000454515 391
40 3300025932 Ga0207690_10034474 Ga0207690_100344742 391
41 3300025945 Ga0207679_10056366 Ga0207679_100563662 391
42 3300049580 Ga0501046_0000270 Ga0501046_0000270_29933_31117 391
43 3300053119 Ga0500595_008872 Ga0500595_008872_257_1432 391
44 3300025297 Ga0209758_1012231 Ga0209758_10122313 392
45 3300031711 Ga0265314_10000857 Ga0265314_1000085727 392
46 3300048929 Ga0496126_0131509 Ga0496126_0131509_371_1549 392
47 3300049823 Ga0501044_0075385 Ga0501044_0075385_829_2007 392
48 3300046526 Ga0495666_0017955 Ga0495666_0017955_1738_2976 393
49 3300046531 Ga0495665_0003160 Ga0495665_0003160_7118_8356 393
50 3300046557 Ga0495622_0015027 Ga0495622_0015027_560_1798 393
51 3300046689 Ga0495613_0074737 Ga0495613_0074737_862_2100 393
52 3300046690 Ga0495624_0007511 Ga0495624_0007511_3066_4304 393
53 3300049581 Ga0501047_0119857 Ga0501047_0119857_193_1374 393
54 3300049586 Ga0501070_0083513 Ga0501070_0083513_446_1627 393
55 3300049823 Ga0501044_0079371 Ga0501044_0079371_1854_3035 393
56 iso_pu_bacteria 2511231221 2512031977 394
57 3300005434 Ga0070709_10000351 Ga0070709_1000035126 395
58 3300005435 Ga0070714_100028075 Ga0070714_1000280752 395
59 3300005436 Ga0070713_100012806 Ga0070713_1000128063 395
60 3300005844 Ga0068862_100225457 Ga0068862_1002254571 395
61 3300006038 Ga0075365_10000985 Ga0075365_100009854 395
62 3300006173 Ga0070716_100003029 Ga0070716_1000030293 395
63 3300006175 Ga0070712_100055217 Ga0070712_1000552173 395
64 3300025898 Ga0207692_10000560 Ga0207692_100005608 395
65 3300025906 Ga0207699_10000274 Ga0207699_1000027421 395
66 3300025915 Ga0207693_10025558 Ga0207693_100255583 395
67 3300025916 Ga0207663_10001335 Ga0207663_100013353 395
68 3300025928 Ga0207700_10067548 Ga0207700_100675482 395
69 3300025939 Ga0207665_10005784 Ga0207665_100057843 395
70 3300050490 nmdc:mga03n38_61189_c1 nmdc:mga03n38_61189_c1_124_1317 395
71 iso_pu_bacteria 2534681786 2535484765 395
72 iso_pu_bacteria 2929199973 2929203236 395
73 iso_pu_bacteria 8055909800 8055915085 395
74 3300046462 Ga0495651_0000528 Ga0495651_0000528_9388_10638 396
75 3300046477 Ga0495664_0010160 Ga0495664_0010160_3043_4293 396
76 3300046511 Ga0495608_0026167 Ga0495608_0026167_1226_2476 396
77 3300046529 Ga0495652_0018047 Ga0495652_0018047_1899_3149 396
78 3300046536 Ga0495587_0001231 Ga0495587_0001231_3697_4947 396
79 3300046543 Ga0495645_0055315 Ga0495645_0055315_1607_2857 396
80 3300046559 Ga0495667_0019969 Ga0495667_0019969_1181_2431 396
81 3300046642 Ga0495634_0076083 Ga0495634_0076083_382_1632 396
82 3300046663 Ga0495635_0130431 Ga0495635_0130431_450_1700 396
83 3300046675 Ga0495657_0003048 Ga0495657_0003048_87_1337 396
84 3300046678 Ga0495599_0050459 Ga0495599_0050459_1082_2332 396
85 3300046679 Ga0495623_0024226 Ga0495623_0024226_1652_2902 396
86 3300046680 Ga0495646_0022521 Ga0495646_0022521_982_2232 396
87 3300046809 Ga0495600_0003916 Ga0495600_0003916_6699_7949 396
88 3300047317 Ga0495604_0005833 Ga0495604_0005833_1789_3039 396
89 3300047319 Ga0495674_0038333 Ga0495674_0038333_1070_2320 396
90 3300047322 Ga0495680_0002256 Ga0495680_0002256_70_1320 396
91 3300005563 Ga0068855_100095666 Ga0068855_1000956663 397
92 3300005614 Ga0068856_100041176 Ga0068856_1000411764 397
93 3300025949 Ga0207667_10206028 Ga0207667_102060282 397
94 3300026078 Ga0207702_10303719 Ga0207702_103037191 397
95 3300037471 Ga0395905_0014005 Ga0395905_0014005_6004_7215 398
96 3300048925 Ga0496122_0027877 Ga0496122_0027877_835_2031 398
97 iso_pu_bacteria 2767802442 2770198429 398
98 iso_pu_bacteria 2791355266 2793364285 398
99 iso_pu_bacteria 8005395548 8005399393 398
100 3300005719 Ga0068861_100034175 Ga0068861_1000341752 399
101 3300026088 Ga0207641_10078882 Ga0207641_100788822 399
102 3300026118 Ga0207675_100242873 Ga0207675_1002428732 399
103 iso_pu_bacteria 2883354860 2883359430 399
104 3300049581 Ga0501047_0293068 Ga0501047_0293068_68_1270 400
105 iso_pu_bacteria 2545555834 2545679407 400
106 iso_pu_bacteria 2861691609 2861696265 400
107 iso_pu_bacteria 641522639 641644510 400
108 3300025295 Ga0209564_1000074 Ga0209564_1000074104 401
109 3300032133 Ga0316583_10001216 Ga0316583_100012161 401
110 3300046459 Ga0495629_0023802 Ga0495629_0023802_1183_2391 401
111 3300046460 Ga0495638_0000084 Ga0495638_0000084_147473_148687 401
112 3300046476 Ga0495662_0011116 Ga0495662_0011116_120_1328 401
113 3300046477 Ga0495664_0014784 Ga0495664_0014784_1981_3189 401
114 3300046507 Ga0495606_0127832 Ga0495606_0127832_259_1467 401
115 3300046529 Ga0495652_0103705 Ga0495652_0103705_171_1379 401
116 3300046675 Ga0495657_0033244 Ga0495657_0033244_1618_2826 401
117 3300046809 Ga0495600_0009487 Ga0495600_0009487_74_1282 401
118 3300047317 Ga0495604_0138757 Ga0495604_0138757_160_1368 401
119 3300049581 Ga0501047_0147300 Ga0501047_0147300_51_1259 401
120 3300053090 Ga0500646_0032111 Ga0500646_0032111_69_1283 401
121 3300053108 Ga0500562_000910 Ga0500562_000910_3937_5145 401
122 3300053139 Ga0500568_0000200 Ga0500568_0000200_2489_3703 401
123 iso_pu_bacteria 2643221694 2644524681 401
124 iso_pu_bacteria 2643221722 2644668770 401
125 iso_pu_bacteria 2841760612 2841764842 401
126 iso_pu_bacteria 2844104063 2844107710 401
127 iso_pu_bacteria 2848858292 2848860997 401
128 iso_pu_bacteria 2851246043 2851249816 401
129 iso_pu_bacteria 2909042592 2909045808 401
130 iso_pu_bacteria 3003665799 3003666572 401
131 iso_pu_bacteria 8057529695 8057533134 401
132 3300025913 Ga0207695_10287498 Ga0207695_102874982 402
133 3300038443 Ga0395901_0149727 Ga0395901_0149727_533_1741 402
134 3300045049 Ga0466959_0007887 Ga0466959_0007887_4499_5707 402
135 3300049571 Ga0501034_0130543 Ga0501034_0130543_152_1363 402
136 3300049571 Ga0501034_0167451 Ga0501034_0167451_284_1498 402
137 3300049589 Ga0501073_0013428 Ga0501073_0013428_2147_3361 402
138 3300049744 Ga0501083_0002552 Ga0501083_0002552_5440_6654 402
139 3300049823 Ga0501044_0216130 Ga0501044_0216130_618_1841 402
140 iso_pu_bacteria 2602042107 2603857054 402
141 iso_pu_bacteria 2840764183 2840769828 402
142 iso_pu_bacteria 2842698319 2842702293 402
143 iso_pu_bacteria 2883291878 2883296728 402
144 3300046471 Ga0495650_0016526 Ga0495650_0016526_720_1949 403
145 iso_pu_bacteria 2643221733 2644732532 403
146 iso_pu_bacteria 2643221736 2644743839 403
147 iso_pu_bacteria 2851182111 2851183530 403
148 3300009545 Ga0105237_10109050 Ga0105237_101090502 404
149 3300046459 Ga0495629_0166566 Ga0495629_0166566_218_1474 404
150 3300046499 Ga0495594_0018804 Ga0495594_0018804_19_1257 404
151 3300048918 Ga0496115_0007024 Ga0496115_0007024_4030_5301 404
152 3300048929 Ga0496126_0046824 Ga0496126_0046824_210_1430 404
153 3300005262 Ga0065165_1000229 Ga0065165_100022976 405
154 3300025284 Ga0209130_1000045 Ga0209130_100004557 405
155 3300025294 Ga0209025_1002792 Ga0209025_10027922 405
156 3300037312 Ga0395899_0000013 Ga0395899_0000013_40670_41914 405
157 3300046471 Ga0495650_0000001 Ga0495650_0000001_846212_847450 405
158 3300046558 Ga0495633_0066251 Ga0495633_0066251_75_1403 405
159 3300047318 Ga0495636_0014165 Ga0495636_0014165_1159_2487 405
160 3300048091 Ga0495626_0002405 Ga0495626_0002405_3802_5043 405
161 iso_pu_bacteria 2597490356 2599102568 405
162 iso_pu_bacteria 2846952575 2846955280 405
163 iso_pu_bacteria 2888388044 2888393577 405
164 iso_pu_bacteria 8054002106 8054003557 405
165 3300006186 Ga0075369_10027200 Ga0075369_100272002 406
166 3300048907 Ga0496104_0053045 Ga0496104_0053045_2564_3790 406
167 3300048909 Ga0496106_0000587 Ga0496106_0000587_2626_3852 406
168 3300048911 Ga0496108_0000517 Ga0496108_0000517_3416_4642 406
169 3300048912 Ga0496109_0000814 Ga0496109_0000814_15489_16715 406
170 3300048913 Ga0496110_0025071 Ga0496110_0025071_3417_4643 406
171 3300048916 Ga0496113_0059889 Ga0496113_0059889_791_2017 406
172 iso_pu_bacteria 2595698237 2596375098 406
173 iso_pu_bacteria 2738541281 2738744213 406
174 iso_pu_bacteria 2738543032 2739353443 406
175 iso_pu_bacteria 2885366525 2885369134 406
176 iso_pu_bacteria 2889306138 2889311821 406
177 iso_pu_bacteria 2902330777 2902335406 406
178 iso_pu_bacteria 2902405164 2902409492 406
179 iso_pu_bacteria 2928125067 2928126446 406
180 3300046477 Ga0495664_0017953 Ga0495664_0017953_1506_2735 407
181 3300049459 Ga0495678_008746 Ga0495678_008746_310_1554 407
182 iso_pu_bacteria 643348564 643602553 407
183 3300021320 Ga0214544_1000002 Ga0214544_1000002200 408
184 3300021321 Ga0214542_1000001 Ga0214542_1000001550 408
185 3300021324 Ga0214545_1000001 Ga0214545_1000001616 408
186 3300021327 Ga0214543_1000001 Ga0214543_1000001580 408
187 3300035170 Ga0373943_0066160 Ga0373943_0066160_207_1442 408
188 3300035692 Ga0373935_0033773 Ga0373935_0033773_52_1287 408
189 3300035725 Ga0373947_0028338 Ga0373947_0028338_127_1362 408
190 3300039447 Ga0436361_0036466 Ga0436361_0036466_355_1608 408
191 3300046533 Ga0495640_0014517 Ga0495640_0014517_361_1596 408
192 3300005339 Ga0070660_100000912 Ga0070660_10000091219 409
193 3300005347 Ga0070668_100160976 Ga0070668_1001609761 409
194 3300031595 Ga0265313_10039669 Ga0265313_100396692 409
195 3300037312 Ga0395899_0026410 Ga0395899_0026410_2657_3892 409
196 3300037466 Ga0395898_0012056 Ga0395898_0012056_6508_7743 409
197 3300053737 Ga0500601_001801 Ga0500601_001801_25_1254 409
198 3300003215 JGI25153J46596_10005709 JGI25153J46596_100057095 410
199 3300025273 Ga0209673_1009366 Ga0209673_10093663 410
200 3300025297 Ga0209758_1000321 Ga0209758_100032176 410
201 3300044842 Ga0466957_0057575 Ga0466957_0057575_920_2311 410
202 3300048920 Ga0496117_0046027 Ga0496117_0046027_436_1680 410
203 3300049569 Ga0501032_0003177 Ga0501032_0003177_295_1527 410
204 3300049570 Ga0501033_0003864 Ga0501033_0003864_806_2038 410
205 3300049585 Ga0501069_0098128 Ga0501069_0098128_237_1469 410
206 3300049742 Ga0501080_0117580 Ga0501080_0117580_270_1502 410
207 3300005614 Ga0068856_100000020 Ga0068856_10000002046 411
208 3300025921 Ga0207652_10107161 Ga0207652_101071612 411
209 iso_pu_bacteria 2879110137 2879115791 411
210 3300048917 Ga0496114_0168330 Ga0496114_0168330_542_1855 413
211 3300049574 Ga0501038_0223654 Ga0501038_0223654_129_1433 413
212 3300001979 JGI24740J21852_10008556 JGI24740J21852_100085562 414
213 3300001990 JGI24737J22298_10006707 JGI24737J22298_100067072 414
214 3300005457 Ga0070662_100168489 Ga0070662_1001684891 414
215 3300005539 Ga0068853_100024941 Ga0068853_1000249414 414
216 3300005539 Ga0068853_100250638 Ga0068853_1002506381 414
217 3300005563 Ga0068855_100021773 Ga0068855_1000217736 414
218 3300005563 Ga0068855_100200498 Ga0068855_1002004982 414
219 3300005577 Ga0068857_100019791 Ga0068857_1000197914 414
220 3300005578 Ga0068854_100004354 Ga0068854_1000043545 414
221 3300005614 Ga0068856_100221305 Ga0068856_1002213052 414
222 3300005834 Ga0068851_10006597 Ga0068851_100065973 414
223 3300005834 Ga0068851_10099639 Ga0068851_100996392 414
224 3300009093 Ga0105240_10009843 Ga0105240_100098432 414
225 3300009093 Ga0105240_10012471 Ga0105240_100124717 414
226 3300009174 Ga0105241_10002167 Ga0105241_100021673 414
227 3300009551 Ga0105238_10004236 Ga0105238_100042368 414
228 3300009551 Ga0105238_10011608 Ga0105238_100116085 414
229 3300010375 Ga0105239_10009220 Ga0105239_100092204 414
230 3300010375 Ga0105239_10018869 Ga0105239_100188694 414
231 3300025321 Ga0207656_10010346 Ga0207656_100103462 414
232 3300025904 Ga0207647_10008784 Ga0207647_100087842 414
233 3300025913 Ga0207695_10005095 Ga0207695_100050952 414
234 3300025913 Ga0207695_10035791 Ga0207695_100357914 414
235 3300025924 Ga0207694_10000050 Ga0207694_10000050133 414
236 3300025924 Ga0207694_10046521 Ga0207694_100465212 414
237 3300025933 Ga0207706_10151819 Ga0207706_101518192 414
238 3300025949 Ga0207667_10033588 Ga0207667_100335882 414
239 3300025949 Ga0207667_10104848 Ga0207667_101048482 414
240 3300025981 Ga0207640_10007948 Ga0207640_100079482 414
241 3300026041 Ga0207639_10014444 Ga0207639_100144442 414
242 3300026041 Ga0207639_10042449 Ga0207639_100424493 414
243 3300026067 Ga0207678_10036164 Ga0207678_100361643 414
244 3300026078 Ga0207702_10000002 Ga0207702_10000002243 414
245 3300026116 Ga0207674_10003205 Ga0207674_1000320510 414
246 3300026116 Ga0207674_10003611 Ga0207674_100036115 414
247 3300035120 Ga0373957_0003761 Ga0373957_0003761_298_1545 414
248 3300048088 Ga0495602_0088041 Ga0495602_0088041_301_1557 414

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03486

HI0933_like

HI0933-like protein Rossmann domain

55

444

0.98

PF22780

HI0933_like_1st

HI0933-like protein barrel and H2TH domain

240

391

0.96

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

59

92

0.94

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

56

94

0.93

PF01494

FAD_binding_3

FAD binding domain

54

102

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o1i-assembly1.cif.gz_A-2 structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-e141a mutant 0.9785 7 37
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9611 8 35
8bk1-assembly1.cif.gz_A mutant imine reductase ir007-143 from amycolatopsis azurea, e120a, m197w, m206s, a213p, d238g, i240l 0.9414 8 35
8bj5-assembly2.cif.gz_C imine reductase ir007 from amycolatopsis azurea 0.939 8 35
6toe-assembly3.cif.gz_D imine reductase from myxococcus stipitatus v8 variant in complex with nad+ 0.9351 8 35
ID Description Score Start End Superfamily
1vkzB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9846 7 35 3.40.50.20
2vq3B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.978 8 36 3.40.50.720
af_P9WJL5_17_103_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9556 6 39 3.40.50.720
af_P9WGQ1_2_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9539 9 39 3.40.50.720
af_Q9UT59_4_334_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9516 8 35 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1Q5RQG2-F1-model_v4 NAD(FAD)-utilizing dehydrogenase 0.9953 8 164
AF-A0A533J2Q3-F1-model_v4 deleted 0.9948 9 159
AF-A0A4E0QI41-F1-model_v4 deleted 0.9932 1 409
AF-A0A3D5ZT21-F1-model_v4 deleted 0.992 8 123
AF-A0A829E9X3-F1-model_v4 deleted 0.9853 21 124

Feature Viewer

pLDDT pTM Quality
94.04 0.9 High
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Predicted Structure (AlphaFold2)

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