F356931

General Info

Members Datasets Scaffolds Average Seq Length
244 189 225 412

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2687453129|2687579893
Length 469
Sequence ISSTLLMRRLGAVINAERHEVMPALVGFLLFFCLFSGYFMLRPLRESMGIMAGIENLQWLFTATFFVMLVTVPMFAWLSSRVPRLHFIDWVYGFFCLNLLLFTGLFQFAGENIWLARVFYVWISVYNLFVVSVAWSLMADVFDGRQAKRLFAFIAAGASVGGLAGPAVSALLVGEIGQAGLVLLAGVLLGIALALKSPLMRWREIGGAGRQGAPPVESTRQPVVGNPFSGFTRVMQSPYLLAIAGFVVLLATVATFLYFEQARLVAERFPDQASQIRVFGIIDFIVQAGALLSQLFITGRIAQKMGVRTLLAIVPMVVCVGFIGLALAPSFALLAVLMIVRRIGEYAFVRPGREMLFAPLDAESKYKAKGFIDTVVYRGGDAVSGWIKSALDMLGQGAVLVALVGAAFALLWAALGWQLGRRADRLSSGDRGNGPDGGMLARPPRANALPCKRRQCFLSKRFSLSPDQG

Samples

Sample ID Description Type Environment
1 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
2 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
3 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
4 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
5 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
6 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
7 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
8 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
9 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
10 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
11 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
12 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
13 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
14 3007252601 Pseudomonas punonensis D1-6 Isolate Unclassified
15 3007315729 Pseudomonas argentinensis SA190 Isolate Unclassified
16 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
65 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
69 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
70 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
72 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
73 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
74 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
75 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
76 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
79 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
88 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
89 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
90 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
91 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
92 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
93 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
94 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
95 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
96 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
103 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
110 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
111 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
127 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
128 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
129 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
188 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
189 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.21
Metatranscriptomes 0
Isolates 7.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.46
Nodule 0
Rhizoplane 3.28
Rhizosphere 89.75
Stem 0
Stem Tuber 0
Unclassified 4.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058692_1017821 3300003856 Bacteria 1549
2 Ga0065704_10000438 3300005289 Bacteria 23075
3 Ga0065707_10097650 3300005295 Bacteria 3156
4 Ga0068869_100063844 3300005334 Bacteria 2707
5 Ga0070680_100031312 3300005336 Bacteria 4276
6 Ga0070689_100063416 3300005340 Bacteria 2876
7 Ga0070674_100171829 3300005356 Bacteria 1653
8 Ga0070659_100010728 3300005366 Bacteria 6753
9 Ga0070663_100002694 3300005455 Bacteria 10055
10 Ga0070678_100012619 3300005456 Bacteria 5264
11 Ga0070681_10006780 3300005458 Bacteria 11150
12 Ga0070698_100099167 3300005471 Bacteria 2887
13 Ga0070699_100260246 3300005518 Bacteria 1552
14 Ga0070679_100103537 3300005530 Bacteria 2833
15 Ga0070672_100052643 3300005543 Bacteria 3179
16 Ga0070686_100009877 3300005544 Bacteria 5365
17 Ga0070695_100051559 3300005545 Bacteria 2641
18 Ga0070696_100037966 3300005546 Bacteria 3323
19 Ga0070704_100016382 3300005549 Bacteria 4682
20 Ga0068857_100033521 3300005577 Bacteria 4542
21 Ga0068856_100077705 3300005614 Bacteria 3289
22 Ga0068859_100031447 3300005617 Bacteria 5331
23 Ga0068859_100036104 3300005617 Bacteria 4961
24 Ga0068861_100002907 3300005719 Bacteria 11291
25 Ga0068861_100121086 3300005719 Unclassified 2111
26 Ga0075428_100200701 3300006844 Bacteria 2156
27 Ga0075431_100022190 3300006847 Bacteria 6491
28 Ga0075431_100032012 3300006847 Bacteria 5419
29 Ga0075433_10028175 3300006852 Bacteria 4774
30 Ga0075429_100002960 3300006880 Bacteria 14410
31 Ga0075429_100021880 3300006880 Bacteria 5543
32 Ga0075436_100123527 3300006914 Bacteria 1813
33 Ga0097620_100031447 3300006931 Bacteria 5331
34 Ga0097620_100036105 3300006931 Bacteria 4961
35 Ga0075435_100022622 3300007076 Bacteria 4850
36 Ga0099794_10023935 3300007265 Bacteria 2798
37 Ga0111539_10007484 3300009094 Bacteria 13982
38 Ga0111539_10055825 3300009094 Bacteria 4695
39 Ga0105245_10006105 3300009098 Bacteria 10593
40 Ga0114129_10002575 3300009147 Bacteria 25196
41 Ga0114129_10047338 3300009147 Bacteria 6043
42 Ga0114129_10074639 3300009147 Bacteria 4724
43 Ga0114129_10618669 3300009147 Bacteria 1401
44 Ga0105241_10087122 3300009174 Bacteria 2457
45 Ga0105237_10021139 3300009545 Bacteria 6694
46 Ga0105238_10042300 3300009551 Bacteria 4614
47 Ga0105249_10267166 3300009553 Bacteria 1703
48 Ga0209676_1000170 3300025292 Bacteria 154647
49 Ga0209676_1001160 3300025292 Bacteria 28661
50 Ga0209257_1000170 3300025304 Bacteria 169384
51 Ga0207657_10011621 3300025919 Bacteria 8731
52 Ga0207670_10112331 3300025936 Bacteria 1966
53 Ga0207667_10024238 3300025949 Bacteria 6667
54 Ga0207712_10116367 3300025961 Bacteria 2014
55 Ga0207678_10000115 3300026067 Bacteria 66130
56 Ga0207674_10065677 3300026116 Bacteria 3656
57 Ga0207675_100017155 3300026118 Bacteria 6762
58 Ga0207683_10032478 3300026121 Bacteria 4534
59 Ga0209371_1000354 3300027312 Bacteria 49531
60 Ga0268256_1000456 3300030500 Bacteria 36006
61 Ga0307408_100000002 3300031548 Bacteria 827227
62 Ga0307414_10036549 3300032004 Bacteria 3280
63 Ga0307414_10123845 3300032004 Bacteria 1993
64 Ga0316583_10024318 3300032133 Bacteria 2164
65 Ga0373934_0000944 3300035086 Bacteria 10527
66 Ga0373923_0001212 3300035111 Bacteria 7226
67 Ga0373936_0004024 3300035113 Bacteria 5544
68 Ga0373945_0033148 3300035116 Bacteria 1834
69 Ga0373953_0001183 3300035117 Bacteria 7415
70 Ga0373954_0001300 3300035118 Bacteria 10047
71 Ga0373954_0002466 3300035118 Bacteria 7760
72 Ga0373956_0000999 3300035119 Bacteria 11699
73 Ga0373956_0090600 3300035119 Bacteria 1410
74 Ga0373957_0000409 3300035120 Bacteria 10880
75 Ga0373943_0018741 3300035170 Bacteria 3181
76 Ga0373946_0057399 3300035171 Bacteria 1646
77 Ga0373924_0000702 3300035410 Bacteria 10414
78 Ga0373935_0060840 3300035692 Bacteria 2416
79 Ga0373927_0013253 3300035695 Bacteria 5481
80 Ga0373927_0064725 3300035695 Bacteria 2365
81 Ga0373937_0023206 3300036401 Bacteria 5585
82 Ga0373937_0026701 3300036401 Bacteria 5217
83 Ga0316584_0090270 3300036712 Bacteria 2294
84 Ga0373925_0003772 3300037068 Bacteria 11649
85 Ga0373925_0003828 3300037068 Bacteria 11545
86 Ga0395898_0013463 3300037466 Bacteria 8423
87 Ga0395898_0164093 3300037466 Bacteria 2125
88 Ga0395901_0330368 3300038443 Bacteria 1576
89 Ga0439436_0001524 3300041404 Bacteria 6734
90 Ga0439436_0039455 3300041404 Bacteria 1356
91 Ga0439438_012092 3300041405 Bacteria 2659
92 Ga0439447_009231 3300041407 Bacteria 3003
93 Ga0439441_002641 3300042001 Bacteria 2547
94 Ga0439445_0004777 3300042004 Bacteria 3072
95 Ga0439449_0000042 3300042007 Bacteria 38864
96 Ga0439452_000956 3300042010 Bacteria 12976
97 Ga0439446_0001362 3300042156 Bacteria 5518
98 Ga0439446_0018437 3300042156 Bacteria 1955
99 Ga0439435_0007967 3300042436 Bacteria 2446
100 Ga0439460_0000909 3300042461 Bacteria 6772
101 Ga0451576_0110868 3300045051 Bacteria 2855
102 Ga0451576_0194478 3300045051 Bacteria 2119
103 Ga0466967_0072483 3300045976 Bacteria 3087
104 Ga0495627_000050 3300046453 Bacteria 162327
105 Ga0495592_0001593 3300046454 Bacteria 15865
106 Ga0495592_0010147 3300046454 Bacteria 7097
107 Ga0495592_0021358 3300046454 Bacteria 4923
108 Ga0495603_0006508 3300046455 Bacteria 7002
109 Ga0495591_002671 3300046458 Bacteria 9706
110 Ga0495641_0003834 3300046461 Bacteria 10980
111 Ga0495651_0004009 3300046462 Bacteria 11255
112 Ga0495580_0005515 3300046472 Bacteria 10445
113 Ga0495580_0031367 3300046472 Bacteria 3840
114 Ga0495639_0002712 3300046475 Bacteria 7698
115 Ga0495639_0024922 3300046475 Bacteria 2635
116 Ga0495662_0004642 3300046476 Bacteria 6894
117 Ga0495664_0016247 3300046477 Bacteria 4239
118 Ga0495607_0000016 3300046501 Bacteria 177613
119 Ga0495607_0000074 3300046501 Bacteria 99993
120 Ga0495608_0042003 3300046511 Bacteria 3057
121 Ga0495618_0006781 3300046514 Bacteria 6935
122 Ga0495628_0001460 3300046516 Bacteria 21680
123 Ga0495628_0002545 3300046516 Bacteria 16405
124 Ga0495630_0002275 3300046517 Bacteria 13362
125 Ga0495631_0001161 3300046518 Bacteria 16288
126 Ga0495632_0010445 3300046519 Bacteria 5498
127 Ga0495632_0026113 3300046519 Bacteria 3078
128 Ga0495666_0006545 3300046526 Bacteria 5861
129 Ga0495666_0022483 3300046526 Bacteria 3123
130 Ga0495652_0003562 3300046529 Bacteria 15287
131 Ga0495652_0033732 3300046529 Bacteria 4466
132 Ga0495654_0034202 3300046530 Bacteria 2566
133 Ga0495640_0028477 3300046533 Bacteria 4021
134 Ga0495586_0004012 3300046535 Bacteria 7886
135 Ga0495586_0052896 3300046535 Bacteria 2199
136 Ga0495587_0003941 3300046536 Bacteria 9845
137 Ga0495597_0000002 3300046542 Bacteria 420382
138 Ga0495645_0000924 3300046543 Bacteria 19978
139 Ga0495634_0030821 3300046642 Bacteria 3698
140 Ga0495635_0038352 3300046663 Bacteria 3317
141 Ga0495588_0002927 3300046674 Bacteria 7368
142 Ga0495599_0000570 3300046678 Bacteria 21065
143 Ga0495599_0004362 3300046678 Bacteria 8376
144 Ga0495599_0015200 3300046678 Bacteria 4774
145 Ga0495647_0000149 3300046681 Bacteria 17854
146 Ga0495647_0000480 3300046681 Bacteria 11603
147 Ga0495658_0005791 3300046683 Bacteria 6064
148 Ga0495658_0007352 3300046683 Bacteria 5445
149 Ga0495613_0009474 3300046689 Bacteria 7224
150 Ga0495600_0001918 3300046809 Bacteria 11672
151 Ga0495660_0066903 3300046810 Bacteria 1915
152 Ga0495604_0009937 3300047317 Bacteria 7533
153 Ga0495674_0005851 3300047319 Bacteria 11792
154 Ga0495672_0000853 3300047320 Bacteria 32309
155 Ga0495672_0027399 3300047320 Bacteria 3621
156 Ga0495680_0007576 3300047322 Bacteria 9927
157 Ga0495675_0000830 3300047444 Bacteria 18920
158 Ga0495684_0004058 3300047471 Bacteria 11426
159 Ga0495593_0057457 3300047673 Bacteria 2043
160 Ga0496102_0308016 3300048905 Bacteria 1492
161 Ga0496103_0101398 3300048906 Bacteria 1822
162 Ga0496106_0001876 3300048909 Bacteria 15734
163 Ga0496107_0000749 3300048910 Bacteria 18633
164 Ga0496114_0013088 3300048917 Bacteria 6646
165 Ga0496115_0004118 3300048918 Bacteria 10495
166 Ga0496122_0023034 3300048925 Bacteria 5511
167 Ga0496123_0089157 3300048926 Bacteria 1838
168 Ga0496124_0000004 3300048927 Bacteria 976131
169 Ga0501032_0004048 3300049569 Bacteria 11116
170 Ga0501034_0000068 3300049571 Bacteria 182904
171 Ga0501034_0000321 3300049571 Bacteria 84273
172 Ga0501036_0048004 3300049572 Bacteria 3615
173 Ga0501036_0252764 3300049572 Bacteria 1477
174 Ga0501037_0001682 3300049573 Bacteria 16075
175 Ga0501038_0066930 3300049574 Bacteria 3058
176 Ga0501038_0160940 3300049574 Bacteria 1824
177 Ga0501039_0000205 3300049575 Bacteria 43025
178 Ga0501042_0052419 3300049578 Bacteria 2910
179 Ga0501043_0058450 3300049579 Bacteria 3027
180 Ga0501046_0024877 3300049580 Bacteria 4905
181 Ga0501047_0000152 3300049581 Bacteria 84703
182 Ga0501047_0195291 3300049581 Bacteria 1886
183 Ga0501047_0277718 3300049581 Bacteria 1520
184 Ga0501067_0000717 3300049583 Bacteria 17862
185 Ga0501067_0008162 3300049583 Bacteria 5817
186 Ga0501070_0017252 3300049586 Bacteria 6063
187 Ga0501072_0000763 3300049588 Bacteria 23454
188 Ga0501075_0030731 3300049591 Bacteria 3980
189 Ga0501077_0015542 3300049593 Bacteria 4793
190 Ga0501077_0132754 3300049593 Bacteria 1579
191 Ga0501225_0022770 3300049705 Bacteria 1730
192 Ga0501079_0006097 3300049741 Bacteria 9036
193 Ga0501079_0183686 3300049741 Bacteria 1632
194 Ga0501080_0000001 3300049742 Bacteria 241365
195 Ga0501080_0042345 3300049742 Bacteria 4241
196 Ga0501080_0048709 3300049742 Bacteria 3943
197 Ga0501081_0094031 3300049743 Bacteria 2111
198 Ga0501035_0000015 3300049822 Bacteria 246493
199 Ga0501044_0000390 3300049823 Bacteria 54419
200 Ga0501045_0067677 3300049824 Bacteria 2623
201 Ga0501045_0119890 3300049824 Bacteria 1953
202 Ga0501226_000009 3300049853 Bacteria 194138
203 nmdc:mga05p37_113381_c1 3300050507 Bacteria 3333
204 nmdc:mga05p37_429_c1 3300050507 Bacteria 45424
205 nmdc:mga05p37_52299_c1 3300050507 Bacteria 5023
206 nmdc:mga09592_478_c1 3300050508 Bacteria 29908
207 nmdc:mga06r32_14590_c1 3300050510 Bacteria 7133
208 nmdc:mga06r32_3717_c1 3300050510 Bacteria 13645
209 nmdc:mga06r32_87922_c1 3300050510 Bacteria 3033
210 nmdc:mga08y16_81248_c1 3300050511 Bacteria 3379
211 nmdc:mga0rr50_4737_c1 3300050513 Bacteria 8021
212 nmdc:mga0a205_28310_c1 3300050515 Bacteria 5357
213 Ga0495601_0001745 3300053077 Bacteria 12021
214 Ga0495601_0004596 3300053077 Bacteria 7987
215 Ga0495595_0006859 3300053084 Bacteria 4647
216 Ga0495619_0008200 3300053085 Bacteria 6606
217 Ga0500595_042476 3300053119 Bacteria 1454
218 Ga0500618_000885 3300053125 Bacteria 15894
219 Ga0500616_0005231 3300053153 Bacteria 8876
220 Ga0501084_0185890 3300054114 Bacteria 1754
221 Ga0501082_0006051 3300060353 Bacteria 10501
222 Ga0501082_0010070 3300060353 Bacteria 8145
223 Ga0501082_0051150 3300060353 Bacteria 3561
224 Ga0501082_0316684 3300060353 Bacteria 1359
225 Ga0530510_0006242 3300061734 Bacteria 8288

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0330368 Ga0395901_0330368_496_1566 324
2 3300035119 Ga0373956_0090600 Ga0373956_0090600_298_1371 328
3 3300035086 Ga0373934_0000944 Ga0373934_0000944_60_1193 335
4 3300049586 Ga0501070_0017252 Ga0501070_0017252_4867_6051 344
5 3300049581 Ga0501047_0277718 Ga0501047_0277718_61_1245 352
6 3300005544 Ga0070686_100009877 Ga0070686_1000098772 355
7 3300005719 Ga0068861_100121086 Ga0068861_1001210862 355
8 3300035695 Ga0373927_0064725 Ga0373927_0064725_1126_2328 358
9 3300005334 Ga0068869_100063844 Ga0068869_1000638442 361
10 3300005340 Ga0070689_100063416 Ga0070689_1000634162 361
11 3300005543 Ga0070672_100052643 Ga0070672_1000526432 361
12 3300005617 Ga0068859_100036104 Ga0068859_1000361042 361
13 3300005719 Ga0068861_100002907 Ga0068861_1000029074 361
14 3300006931 Ga0097620_100036105 Ga0097620_1000361052 361
15 3300026118 Ga0207675_100017155 Ga0207675_1000171553 361
16 3300049583 Ga0501067_0008162 Ga0501067_0008162_386_1675 362
17 3300042001 Ga0439441_002641 Ga0439441_002641_78_1331 364
18 3300042436 Ga0439435_0007967 Ga0439435_0007967_82_1335 364
19 3300042461 Ga0439460_0000909 Ga0439460_0000909_5440_6693 364
20 3300035170 Ga0373943_0018741 Ga0373943_0018741_1565_2800 365
21 3300035171 Ga0373946_0057399 Ga0373946_0057399_390_1625 365
22 3300035695 Ga0373927_0013253 Ga0373927_0013253_1640_2875 365
23 3300037068 Ga0373925_0003828 Ga0373925_0003828_7331_8566 365
24 3300046455 Ga0495603_0006508 Ga0495603_0006508_2264_3499 365
25 3300046472 Ga0495580_0031367 Ga0495580_0031367_804_2039 365
26 3300046475 Ga0495639_0024922 Ga0495639_0024922_688_1923 365
27 3300046526 Ga0495666_0022483 Ga0495666_0022483_1121_2356 365
28 3300046535 Ga0495586_0004012 Ga0495586_0004012_1962_3197 365
29 3300046674 Ga0495588_0002927 Ga0495588_0002927_1894_3129 365
30 3300046681 Ga0495647_0000149 Ga0495647_0000149_2115_3350 365
31 3300046683 Ga0495658_0007352 Ga0495658_0007352_3825_5060 365
32 3300035118 Ga0373954_0002466 Ga0373954_0002466_5387_6667 366
33 3300036401 Ga0373937_0023206 Ga0373937_0023206_3405_4721 366
34 3300049569 Ga0501032_0004048 Ga0501032_0004048_136_1425 368
35 3300049571 Ga0501034_0000068 Ga0501034_0000068_20378_21667 368
36 3300049572 Ga0501036_0048004 Ga0501036_0048004_1497_2786 368
37 3300049573 Ga0501037_0001682 Ga0501037_0001682_6998_8287 368
38 3300049574 Ga0501038_0066930 Ga0501038_0066930_582_1871 368
39 3300049575 Ga0501039_0000205 Ga0501039_0000205_3256_4545 368
40 3300049579 Ga0501043_0058450 Ga0501043_0058450_156_1442 368
41 3300049580 Ga0501046_0024877 Ga0501046_0024877_832_2121 368
42 3300049581 Ga0501047_0000152 Ga0501047_0000152_6414_7703 368
43 3300049581 Ga0501047_0195291 Ga0501047_0195291_92_1378 368
44 3300049583 Ga0501067_0000717 Ga0501067_0000717_4768_6057 368
45 3300049742 Ga0501080_0000001 Ga0501080_0000001_119147_120436 368
46 3300049822 Ga0501035_0000015 Ga0501035_0000015_171505_172794 368
47 3300049823 Ga0501044_0000390 Ga0501044_0000390_10415_11704 368
48 3300049824 Ga0501045_0067677 Ga0501045_0067677_946_2235 368
49 3300060353 Ga0501082_0006051 Ga0501082_0006051_6471_7760 368
50 3300054114 Ga0501084_0185890 Ga0501084_0185890_138_1391 370
51 3300005295 Ga0065707_10097650 Ga0065707_100976501 371
52 3300006844 Ga0075428_100200701 Ga0075428_1002007012 371
53 3300006880 Ga0075429_100021880 Ga0075429_1000218803 371
54 3300009147 Ga0114129_10047338 Ga0114129_100473383 371
55 3300050507 nmdc:mga05p37_113381_c1 nmdc:mga05p37_113381_c1_538_1752 371
56 3300050510 nmdc:mga06r32_87922_c1 nmdc:mga06r32_87922_c1_1094_2308 371
57 3300041404 Ga0439436_0039455 Ga0439436_0039455_123_1328 372
58 3300006847 Ga0075431_100032012 Ga0075431_1000320122 373
59 3300006880 Ga0075429_100002960 Ga0075429_1000029608 373
60 3300009147 Ga0114129_10074639 Ga0114129_100746394 373
61 3300050507 nmdc:mga05p37_429_c1 nmdc:mga05p37_429_c1_42207_43475 373
62 3300050508 nmdc:mga09592_478_c1 nmdc:mga09592_478_c1_6347_7615 373
63 3300050510 nmdc:mga06r32_3717_c1 nmdc:mga06r32_3717_c1_11401_12669 373
64 3300045051 Ga0451576_0194478 Ga0451576_0194478_568_1836 375
65 3300005549 Ga0070704_100016382 Ga0070704_1000163826 376
66 3300037466 Ga0395898_0164093 Ga0395898_0164093_89_1378 376
67 3300005546 Ga0070696_100037966 Ga0070696_1000379664 377
68 3300007265 Ga0099794_10023935 Ga0099794_100239353 377
69 3300049742 Ga0501080_0042345 Ga0501080_0042345_2570_3790 377
70 3300049593 Ga0501077_0132754 Ga0501077_0132754_76_1329 378
71 3300035111 Ga0373923_0001212 Ga0373923_0001212_4893_6158 379
72 3300035113 Ga0373936_0004024 Ga0373936_0004024_2978_4243 379
73 3300035116 Ga0373945_0033148 Ga0373945_0033148_172_1437 379
74 3300035117 Ga0373953_0001183 Ga0373953_0001183_1197_2462 379
75 3300035118 Ga0373954_0001300 Ga0373954_0001300_7700_8965 379
76 3300035119 Ga0373956_0000999 Ga0373956_0000999_1583_2848 379
77 3300035120 Ga0373957_0000409 Ga0373957_0000409_552_1817 379
78 3300035410 Ga0373924_0000702 Ga0373924_0000702_480_1745 379
79 3300035692 Ga0373935_0060840 Ga0373935_0060840_925_2190 379
80 3300036401 Ga0373937_0026701 Ga0373937_0026701_2515_3780 379
81 3300037068 Ga0373925_0003772 Ga0373925_0003772_2873_4138 379
82 3300045976 Ga0466967_0072483 Ga0466967_0072483_250_1503 379
83 3300046454 Ga0495592_0010147 Ga0495592_0010147_5210_6475 379
84 3300046461 Ga0495641_0003834 Ga0495641_0003834_4407_5672 379
85 3300046462 Ga0495651_0004009 Ga0495651_0004009_1583_2848 379
86 3300046472 Ga0495580_0005515 Ga0495580_0005515_2826_4091 379
87 3300046475 Ga0495639_0002712 Ga0495639_0002712_94_1359 379
88 3300046477 Ga0495664_0016247 Ga0495664_0016247_1953_3218 379
89 3300046511 Ga0495608_0042003 Ga0495608_0042003_1438_2703 379
90 3300046514 Ga0495618_0006781 Ga0495618_0006781_3310_4575 379
91 3300046517 Ga0495630_0002275 Ga0495630_0002275_8204_9469 379
92 3300046526 Ga0495666_0006545 Ga0495666_0006545_3348_4613 379
93 3300046529 Ga0495652_0033732 Ga0495652_0033732_1835_3100 379
94 3300046533 Ga0495640_0028477 Ga0495640_0028477_2167_3432 379
95 3300046536 Ga0495587_0003941 Ga0495587_0003941_4841_6106 379
96 3300046642 Ga0495634_0030821 Ga0495634_0030821_590_1855 379
97 3300046663 Ga0495635_0038352 Ga0495635_0038352_178_1443 379
98 3300046678 Ga0495599_0004362 Ga0495599_0004362_3801_5066 379
99 3300046681 Ga0495647_0000480 Ga0495647_0000480_7833_9098 379
100 3300046683 Ga0495658_0005791 Ga0495658_0005791_4738_6003 379
101 3300046689 Ga0495613_0009474 Ga0495613_0009474_3154_4419 379
102 3300046809 Ga0495600_0001918 Ga0495600_0001918_3925_5190 379
103 3300047317 Ga0495604_0009937 Ga0495604_0009937_3705_4970 379
104 3300047319 Ga0495674_0005851 Ga0495674_0005851_5315_6580 379
105 3300047322 Ga0495680_0007576 Ga0495680_0007576_4866_6131 379
106 3300047444 Ga0495675_0000830 Ga0495675_0000830_16818_18083 379
107 3300047471 Ga0495684_0004058 Ga0495684_0004058_8770_10035 379
108 3300053077 Ga0495601_0004596 Ga0495601_0004596_1867_3132 379
109 3300053084 Ga0495595_0006859 Ga0495595_0006859_1437_2702 379
110 3300053085 Ga0495619_0008200 Ga0495619_0008200_764_2029 379
111 3300005518 Ga0070699_100260246 Ga0070699_1002602461 380
112 3300006847 Ga0075431_100022190 Ga0075431_1000221905 380
113 3300049572 Ga0501036_0252764 Ga0501036_0252764_163_1416 380
114 3300049574 Ga0501038_0160940 Ga0501038_0160940_511_1764 380
115 3300049578 Ga0501042_0052419 Ga0501042_0052419_1504_2757 380
116 3300049588 Ga0501072_0000763 Ga0501072_0000763_21863_23116 380
117 3300049591 Ga0501075_0030731 Ga0501075_0030731_1505_2758 380
118 3300049593 Ga0501077_0015542 Ga0501077_0015542_137_1390 380
119 3300049741 Ga0501079_0006097 Ga0501079_0006097_1211_2464 380
120 3300049741 Ga0501079_0183686 Ga0501079_0183686_184_1437 380
121 3300049742 Ga0501080_0048709 Ga0501080_0048709_2028_3281 380
122 3300049743 Ga0501081_0094031 Ga0501081_0094031_195_1448 380
123 3300049824 Ga0501045_0119890 Ga0501045_0119890_339_1592 380
124 3300050510 nmdc:mga06r32_14590_c1 nmdc:mga06r32_14590_c1_4380_5645 380
125 3300060353 Ga0501082_0010070 Ga0501082_0010070_6069_7322 380
126 3300060353 Ga0501082_0316684 Ga0501082_0316684_27_1280 380
127 3300061734 Ga0530510_0006242 Ga0530510_0006242_6895_8148 380
128 3300032133 Ga0316583_10024318 Ga0316583_100243182 384
129 3300036712 Ga0316584_0090270 Ga0316584_0090270_528_1868 384
130 3300046458 Ga0495591_002671 Ga0495591_002671_182_1444 384
131 3300046476 Ga0495662_0004642 Ga0495662_0004642_4304_5569 384
132 3300053119 Ga0500595_042476 Ga0500595_042476_126_1403 384
133 3300046454 Ga0495592_0001593 Ga0495592_0001593_12513_13757 385
134 3300046516 Ga0495628_0001460 Ga0495628_0001460_2158_3402 385
135 3300046529 Ga0495652_0003562 Ga0495652_0003562_1427_2671 385
136 3300046543 Ga0495645_0000924 Ga0495645_0000924_16947_18191 385
137 3300046678 Ga0495599_0000570 Ga0495599_0000570_8868_10112 385
138 3300005336 Ga0070680_100031312 Ga0070680_1000313123 386
139 3300005356 Ga0070674_100171829 Ga0070674_1001718291 386
140 3300005366 Ga0070659_100010728 Ga0070659_1000107287 386
141 3300005455 Ga0070663_100002694 Ga0070663_1000026949 386
142 3300005456 Ga0070678_100012619 Ga0070678_1000126194 386
143 3300005458 Ga0070681_10006780 Ga0070681_100067809 386
144 3300005530 Ga0070679_100103537 Ga0070679_1001035372 386
145 3300005545 Ga0070695_100051559 Ga0070695_1000515592 386
146 3300005577 Ga0068857_100033521 Ga0068857_1000335213 386
147 3300005614 Ga0068856_100077705 Ga0068856_1000777052 386
148 3300009098 Ga0105245_10006105 Ga0105245_100061053 386
149 3300009174 Ga0105241_10087122 Ga0105241_100871222 386
150 3300009545 Ga0105237_10021139 Ga0105237_100211394 386
151 3300009551 Ga0105238_10042300 Ga0105238_100423003 386
152 3300025919 Ga0207657_10011621 Ga0207657_100116214 386
153 3300025949 Ga0207667_10024238 Ga0207667_100242383 386
154 3300026067 Ga0207678_10000115 Ga0207678_1000011551 386
155 3300026116 Ga0207674_10065677 Ga0207674_100656772 386
156 3300026121 Ga0207683_10032478 Ga0207683_100324784 386
157 3300037466 Ga0395898_0013463 Ga0395898_0013463_2186_3475 386
158 3300048905 Ga0496102_0308016 Ga0496102_0308016_190_1476 386
159 3300048906 Ga0496103_0101398 Ga0496103_0101398_190_1476 386
160 3300048909 Ga0496106_0001876 Ga0496106_0001876_3888_5174 386
161 3300048910 Ga0496107_0000749 Ga0496107_0000749_9119_10405 386
162 3300048918 Ga0496115_0004118 Ga0496115_0004118_3888_5174 386
163 3300060353 Ga0501082_0051150 Ga0501082_0051150_802_2094 386
164 3300042010 Ga0439452_000956 Ga0439452_000956_1015_2298 387
165 3300009147 Ga0114129_10618669 Ga0114129_106186691 388
166 3300041404 Ga0439436_0001524 Ga0439436_0001524_2811_4094 388
167 3300041405 Ga0439438_012092 Ga0439438_012092_1095_2378 388
168 3300041407 Ga0439447_009231 Ga0439447_009231_1319_2602 388
169 3300042156 Ga0439446_0018437 Ga0439446_0018437_250_1533 388
170 3300053153 Ga0500616_0005231 Ga0500616_0005231_3150_4457 388
171 3300006852 Ga0075433_10028175 Ga0075433_100281753 389
172 3300007076 Ga0075435_100022622 Ga0075435_1000226222 389
173 3300009147 Ga0114129_10002575 Ga0114129_1000257512 389
174 3300046454 Ga0495592_0021358 Ga0495592_0021358_2336_3592 389
175 3300046516 Ga0495628_0002545 Ga0495628_0002545_7777_9033 389
176 3300046535 Ga0495586_0052896 Ga0495586_0052896_627_1883 389
177 3300046678 Ga0495599_0015200 Ga0495599_0015200_913_2169 389
178 3300050507 nmdc:mga05p37_52299_c1 nmdc:mga05p37_52299_c1_2235_3551 389
179 3300050513 nmdc:mga0rr50_4737_c1 nmdc:mga0rr50_4737_c1_3929_5245 389
180 3300050515 nmdc:mga0a205_28310_c1 nmdc:mga0a205_28310_c1_2011_3327 389
181 3300053077 Ga0495601_0001745 Ga0495601_0001745_3412_4668 389
182 3300005471 Ga0070698_100099167 Ga0070698_1000991673 392
183 3300025936 Ga0207670_10112331 Ga0207670_101123312 392
184 3300045051 Ga0451576_0110868 Ga0451576_0110868_908_2173 392
185 3300047673 Ga0495593_0057457 Ga0495593_0057457_244_1509 392
186 3300005617 Ga0068859_100031447 Ga0068859_1000314474 393
187 3300006931 Ga0097620_100031447 Ga0097620_1000314473 393
188 3300009094 Ga0111539_10055825 Ga0111539_100558253 393
189 3300009553 Ga0105249_10267166 Ga0105249_102671662 393
190 3300025961 Ga0207712_10116367 Ga0207712_101163672 393
191 3300049571 Ga0501034_0000321 Ga0501034_0000321_82471_83787 393
192 3300050511 nmdc:mga08y16_81248_c1 nmdc:mga08y16_81248_c1_1259_2527 393
193 iso_pu_bacteria 2600254954 2600444054 394
194 iso_pu_bacteria 2600255389 2602008461 394
195 iso_pu_bacteria 2919501602 2919502426 394
196 iso_pu_bacteria 2926063275 2926064099 394
197 3300042156 Ga0439446_0001362 Ga0439446_0001362_104_1405 395
198 3300046810 Ga0495660_0066903 Ga0495660_0066903_100_1389 395
199 iso_pu_bacteria 640427133 640486256 395
200 iso_pu_bacteria 651053060 651174221 395
201 3300046519 Ga0495632_0026113 Ga0495632_0026113_707_1987 396
202 3300009094 Ga0111539_10007484 Ga0111539_100074845 397
203 3300046453 Ga0495627_000050 Ga0495627_000050_126717_127997 397
204 3300046518 Ga0495631_0001161 Ga0495631_0001161_7598_8878 397
205 3300046519 Ga0495632_0010445 Ga0495632_0010445_2525_3805 397
206 3300046530 Ga0495654_0034202 Ga0495654_0034202_912_2192 397
207 3300047320 Ga0495672_0000853 Ga0495672_0000853_13780_15060 397
208 iso_pu_bacteria 8034962539 8034963623 397
209 3300006914 Ga0075436_100123527 Ga0075436_1001235272 398
210 3300025292 Ga0209676_1001160 Ga0209676_100116014 398
211 3300031548 Ga0307408_100000002 Ga0307408_100000002368 398
212 iso_pu_bacteria 2895498888 2895501980 398
213 iso_pu_bacteria 2895511927 2895517067 398
214 iso_pu_bacteria 2895522137 2895524605 398
215 iso_pu_bacteria 2895525241 2895526281 398
216 3300025304 Ga0209257_1000170 Ga0209257_100017099 400
217 3300053125 Ga0500618_000885 Ga0500618_000885_13386_14696 400
218 iso_pu_bacteria 651053060 651176905 400
219 3300042007 Ga0439449_0000042 Ga0439449_0000042_6964_8265 401
220 3300048925 Ga0496122_0023034 Ga0496122_0023034_1035_2342 401
221 3300048926 Ga0496123_0089157 Ga0496123_0089157_196_1503 401
222 iso_pu_bacteria 2643221579 2643905986 402
223 iso_pu_bacteria 2643221581 2643916554 402
224 iso_pu_bacteria 2857542790 2857547444 402
225 iso_pu_bacteria 2923516293 2923518330 402
226 3300005289 Ga0065704_10000438 Ga0065704_100004387 403
227 3300025292 Ga0209676_1000170 Ga0209676_100017062 403
228 3300032004 Ga0307414_10123845 Ga0307414_101238452 403
229 3300042004 Ga0439445_0004777 Ga0439445_0004777_152_1459 403
230 3300048917 Ga0496114_0013088 Ga0496114_0013088_4563_5870 403
231 3300048927 Ga0496124_0000004 Ga0496124_0000004_940389_941753 403
232 3300046501 Ga0495607_0000074 Ga0495607_0000074_25411_26751 404
233 3300046542 Ga0495597_0000002 Ga0495597_0000002_256204_257532 404
234 3300047320 Ga0495672_0027399 Ga0495672_0027399_2254_3582 404
235 3300046501 Ga0495607_0000016 Ga0495607_0000016_23189_24532 405
236 iso_pu_bacteria 3007252601 3007256292 407
237 iso_pu_bacteria 3007315729 3007319480 407
238 3300049853 Ga0501226_000009 Ga0501226_000009_164902_166233 408
239 3300032004 Ga0307414_10036549 Ga0307414_100365492 409
240 3300049705 Ga0501225_0022770 Ga0501225_0022770_227_1573 410
241 3300003856 Ga0058692_1017821 Ga0058692_10178212 411
242 3300027312 Ga0209371_1000354 Ga0209371_100035415 411
243 3300030500 Ga0268256_1000456 Ga0268256_100045615 411
244 iso_pu_bacteria 2687453129 2687579893 411

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

24

344

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jta-assembly1.cif.gz_A human vmat2 complex with tetrabenazine 0.7025 20 390
8t69-assembly1.cif.gz_A human vmat2 in complex with tetrabenazine 0.6945 25 391
8thr-assembly1.cif.gz_A structure of the human vesicular monoamine transporter 2 (vmat2) bound to tetrabenazine in an occluded conformation 0.6874 19 390
8jta-assembly1.cif.gz_A human vmat2 complex with tetrabenazine 0.6771 20 390
6t1z-assembly1.cif.gz_A lmrp from l. lactis, in an outward-open conformation, bound to hoechst 33342 0.6765 23 397
ID Description Score Start End Superfamily
af_K7MX35_315_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9493 222 393 1.20.1250.20
af_K7MX35_315_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9283 222 393 1.20.1250.20
af_Q2QYN3_23_488_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8734 17 400 1.20.1250.20
af_Q2QYN3_23_488_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8151 17 400 1.20.1250.20
af_D4A757_354_549_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7958 199 389 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A838FIK4-F1-model_v4 MFS transporter 0.964 218 396 GO:0016020
AF-A0A4Q6GCS0-F1-model_v4 MFS transporter 0.9544 207 401 GO:0016020
AF-A0A7V9XKH5-F1-model_v4 deleted 0.9474 194 407
AF-A0A353NEE4-F1-model_v4 ADP,ATP carrier protein 0.9463 194 399 GO:0005471
GO:0005524
GO:0016020
AF-A0A6I7PIM6-F1-model_v4 MFS transporter 0.944 195 400 GO:0016020

Feature Viewer

pLDDT pTM Quality
82.38 0.83 High
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Predicted Structure (AlphaFold2)

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