F355787

General Info

Members Datasets Scaffolds Average Seq Length
243 166 486 415

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0107236|Ga0395898_0107236_205_1572
Length 455
Sequence MHANSQAARGSQDRGGAAADGGLRRILSAELAQYAGRRVRVAGWVHRRRQLAAVSFLILRDRAGLAQVVVRDDASRAAVAEIGEETVVDVIGTAVANRAAPGGVEVIDPEISLLSSIAEPPPFDLYRPIVTASLPTILDNAAVALRHPRLAAPHLMAAASVAGFRTALEAQGFVAIHTPKIVASATESGANVFAIDYFGQQAYLAQSPQLYKQMLVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVTDHFDVIAVLRNAVAGMVAEVGARCEAEVDLLDVSLPAVPETIPSVHFADALAMVGEDIGEDLSAEPDLAPAHERWISDWAMTEHDSEFVAVTGYPMVKRPFYTHPDPARPEYSNSFDLLFRGLELVTGGQRLHRYEDYVAALGAAGQDPRLYAGYLAAFKHGMPPHGGFAIGLERWVARLVGAANIREVTLFPRDLHRLAP

Samples

Sample ID Description Type Environment
1 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
68 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
74 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
81 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
82 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
147 2558860280 Kutzneria sp. 744 Isolate Unclassified
148 2643221711 Terrabacter sp. Root85 Isolate Unclassified
149 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
150 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
151 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
152 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
153 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
154 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
155 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
156 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
157 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
158 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
159 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
160 2891562705 Microbispora tritici MT50 Isolate Unclassified
161 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
162 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
163 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
164 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
165 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
166 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.36
Metatranscriptomes 0.41
Isolates 8.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 0
Rhizoplane 4.12
Rhizosphere 83.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395898_0107236 3300037466 Bacteria 2679
2 JGI25406J46586_10000586 3300003203 Bacteria 17134
3 Ga0070658_10014605 3300005327 Bacteria 6302
4 Ga0068869_100016458 3300005334 Bacteria 4984
5 Ga0070680_100072297 3300005336 Bacteria 2834
6 Ga0070680_100110891 3300005336 Bacteria 2284
7 Ga0068868_100013224 3300005338 Bacteria 6047
8 Ga0070660_100051870 3300005339 Bacteria 3160
9 Ga0070661_100040850 3300005344 Bacteria 3385
10 Ga0070692_10021697 3300005345 Bacteria 3126
11 Ga0070675_100002806 3300005354 Bacteria 13124
12 Ga0070714_100000700 3300005435 Bacteria 23732
13 Ga0070700_100031746 3300005441 Bacteria 3168
14 Ga0070708_100002421 3300005445 Bacteria 14465
15 Ga0070708_100018706 3300005445 Bacteria 5800
16 Ga0070681_10119976 3300005458 Bacteria 2565
17 Ga0070706_100094482 3300005467 Bacteria 2774
18 Ga0070707_100005312 3300005468 Bacteria 12053
19 Ga0070707_100070697 3300005468 Bacteria 3362
20 Ga0070707_100237144 3300005468 Bacteria 1775
21 Ga0070698_100002154 3300005471 Bacteria 21853
22 Ga0070699_100036229 3300005518 Bacteria 4268
23 Ga0070699_100075942 3300005518 Bacteria 2924
24 Ga0068853_100030021 3300005539 Bacteria 4588
25 Ga0070665_100066431 3300005548 Bacteria 3618
26 Ga0068855_100033601 3300005563 Bacteria 6119
27 Ga0068857_100031409 3300005577 Bacteria 4693
28 Ga0068854_100001593 3300005578 Bacteria 13807
29 Ga0068859_100017472 3300005617 Bacteria 7210
30 Ga0068858_100050392 3300005842 Bacteria 3854
31 Ga0081455_10160830 3300005937 Bacteria 1721
32 Ga0081539_10000309 3300005985 Bacteria 109561
33 Ga0081539_10001291 3300005985 Bacteria 44004
34 Ga0070717_10279966 3300006028 Bacteria 1479
35 Ga0075365_10000533 3300006038 Bacteria 14614
36 Ga0075428_100001542 3300006844 Bacteria 24680
37 Ga0075428_100019117 3300006844 Bacteria 7576
38 Ga0075428_100042793 3300006844 Bacteria 4980
39 Ga0075428_100275065 3300006844 Bacteria 1812
40 Ga0075430_100004569 3300006846 Bacteria 11651
41 Ga0075430_100020334 3300006846 Bacteria 5648
42 Ga0075430_100029782 3300006846 Bacteria 4633
43 Ga0075430_100275989 3300006846 Bacteria 1391
44 Ga0075431_100011794 3300006847 Bacteria 8820
45 Ga0075431_100057582 3300006847 Bacteria 4009
46 Ga0075431_100059992 3300006847 Bacteria 3925
47 Ga0075429_100008925 3300006880 Bacteria 8714
48 Ga0075429_100166317 3300006880 Bacteria 1932
49 Ga0097620_100017472 3300006931 Bacteria 7210
50 Ga0111539_10162085 3300009094 Bacteria 2615
51 Ga0105245_10007371 3300009098 Bacteria 9631
52 Ga0105245_10102123 3300009098 Bacteria 2655
53 Ga0114129_10000344 3300009147 Bacteria 54235
54 Ga0114129_10039627 3300009147 Bacteria 6642
55 Ga0114129_10127818 3300009147 Bacteria 3493
56 Ga0114129_10133217 3300009147 Bacteria 3412
57 Ga0114129_10244608 3300009147 Bacteria 2411
58 Ga0114129_10369671 3300009147 Bacteria 1896
59 Ga0105241_10004541 3300009174 Bacteria 10271
60 Ga0105237_10010780 3300009545 Bacteria 9701
61 Ga0105238_10005439 3300009551 Bacteria 12583
62 Ga0105238_10005991 3300009551 Bacteria 12056
63 Ga0105238_10241596 3300009551 Bacteria 1783
64 Ga0105239_10048706 3300010375 Bacteria 4646
65 Ga0105239_10209115 3300010375 Bacteria 2187
66 Ga0157369_10008294 3300013105 Bacteria 11910
67 Ga0157369_10019241 3300013105 Bacteria 7640
68 Ga0157374_10064979 3300013296 Bacteria 3426
69 Ga0163163_10000657 3300014325 Bacteria 29566
70 Ga0163163_10008529 3300014325 Bacteria 9108
71 Ga0206353_11556898 3300020082 Bacteria 4749
72 Ga0207647_10006334 3300025904 Bacteria 8609
73 Ga0207705_10075020 3300025909 Bacteria 2456
74 Ga0207684_10041311 3300025910 Bacteria 3911
75 Ga0207654_10006354 3300025911 Bacteria 5942
76 Ga0207695_10001059 3300025913 Bacteria 48227
77 Ga0207671_10001032 3300025914 Bacteria 33903
78 Ga0207660_10129190 3300025917 Bacteria 1921
79 Ga0207657_10114272 3300025919 Bacteria 2226
80 Ga0207646_10011016 3300025922 Bacteria 8781
81 Ga0207646_10094293 3300025922 Bacteria 2681
82 Ga0207694_10001998 3300025924 Bacteria 16870
83 Ga0207659_10087415 3300025926 Bacteria 2320
84 Ga0207687_10112075 3300025927 Bacteria 2027
85 Ga0207706_10161029 3300025933 Bacteria 1973
86 Ga0207661_10045410 3300025944 Bacteria 3478
87 Ga0207640_10009091 3300025981 Bacteria 5548
88 Ga0207678_10046132 3300026067 Bacteria 3769
89 Ga0207708_10048627 3300026075 Bacteria 3229
90 Ga0207702_10066766 3300026078 Bacteria 3084
91 Ga0207674_10013193 3300026116 Bacteria 9189
92 Ga0207674_10035388 3300026116 Bacteria 5211
93 Ga0207428_10143575 3300027907 Bacteria 1820
94 Ga0268265_10312227 3300028380 Bacteria 1420
95 Ga0265336_10004921 3300028666 Bacteria 4997
96 Ga0307517_10053358 3300028786 Bacteria 4027
97 Ga0307515_10016557 3300028794 Bacteria 13493
98 Ga0265338_10032121 3300028800 Bacteria 5129
99 Ga0307511_10001104 3300030521 Bacteria 28773
100 Ga0307511_10067849 3300030521 Bacteria 2641
101 Ga0307513_10025232 3300031456 Bacteria 6893
102 Ga0316579_10007824 3300031691 Bacteria 4429
103 Ga0307516_10000963 3300031730 Bacteria 39738
104 Ga0307516_10013216 3300031730 Bacteria 8815
105 Ga0307406_10024742 3300031901 Bacteria 3589
106 Ga0307406_10036129 3300031901 Bacteria 3042
107 Ga0307406_10229318 3300031901 Bacteria 1386
108 Ga0307407_10055501 3300031903 Bacteria 2290
109 Ga0307409_100015361 3300031995 Bacteria 5023
110 Ga0307416_100014489 3300032002 Bacteria 5408
111 Ga0307416_100363306 3300032002 Bacteria 1471
112 Ga0307415_100210575 3300032126 Bacteria 1550
113 Ga0316583_10025686 3300032133 Bacteria 2104
114 Ga0316582_0031920 3300036647 Bacteria 3223
115 Ga0316584_0010899 3300036712 Bacteria 6369
116 Ga0395899_0083742 3300037312 Bacteria 2319
117 Ga0395899_0089670 3300037312 Bacteria 2230
118 Ga0395900_0055093 3300037418 Bacteria 4094
119 Ga0395900_0103826 3300037418 Bacteria 2919
120 Ga0395900_0151627 3300037418 Bacteria 2368
121 Ga0395900_0162261 3300037418 Bacteria 2279
122 Ga0395898_0047512 3300037466 Bacteria 4212
123 Ga0395898_0061970 3300037466 Bacteria 3633
124 Ga0395898_0090871 3300037466 Bacteria 2938
125 Ga0395898_0114637 3300037466 Bacteria 2582
126 Ga0395898_0321583 3300037466 Bacteria 1476
127 Ga0395898_0399094 3300037466 Bacteria 1311
128 Ga0395905_0111791 3300037471 Bacteria 2565
129 Ga0395905_0246953 3300037471 Bacteria 1667
130 Ga0436364_0634539 3300037853 Bacteria 17900
131 Ga0436364_0660352 3300037853 Bacteria 25328
132 Ga0395901_0004957 3300038443 Bacteria 13432
133 Ga0395901_0074700 3300038443 Bacteria 3536
134 Ga0395901_0108399 3300038443 Bacteria 2915
135 Ga0395901_0122146 3300038443 Bacteria 2737
136 Ga0395901_0281716 3300038443 Bacteria 1727
137 Ga0436365_0323089 3300039437 Bacteria 32333
138 Ga0436365_0571887 3300039437 Bacteria 4638
139 Ga0451853_1368066 3300041512 Bacteria 1425
140 Ga0466969_0006488 3300044656 Bacteria 6229
141 Ga0466969_0039778 3300044656 Bacteria 2359
142 Ga0466966_0033763 3300044684 Bacteria 3312
143 Ga0466961_0000990 3300044693 Bacteria 17544
144 Ga0466961_0004991 3300044693 Bacteria 8340
145 Ga0466961_0048703 3300044693 Bacteria 2708
146 Ga0466971_0006499 3300044719 Bacteria 5080
147 Ga0466970_0015158 3300044765 Bacteria 3964
148 Ga0466959_0014640 3300045049 Bacteria 5706
149 Ga0466959_0019755 3300045049 Bacteria 4956
150 Ga0466959_0087414 3300045049 Bacteria 2242
151 Ga0466958_0025726 3300045836 Bacteria 3473
152 Ga0466958_0042840 3300045836 Bacteria 2726
153 Ga0466958_0090473 3300045836 Bacteria 1894
154 Ga0466967_0194791 3300045976 Bacteria 1917
155 Ga0495592_0041231 3300046454 Bacteria 3460
156 Ga0495629_0212359 3300046459 Bacteria 1336
157 Ga0495651_0000447 3300046462 Bacteria 31798
158 Ga0495651_0007162 3300046462 Bacteria 8527
159 Ga0495651_0076727 3300046462 Bacteria 2531
160 Ga0495628_0025203 3300046516 Bacteria 4859
161 Ga0495652_0005551 3300046529 Bacteria 11862
162 Ga0495652_0014205 3300046529 Bacteria 7152
163 Ga0495652_0070209 3300046529 Bacteria 2929
164 Ga0495640_0064187 3300046533 Bacteria 2484
165 Ga0495613_0177492 3300046689 Bacteria 1509
166 Ga0495600_0001394 3300046809 Bacteria 13339
167 Ga0495600_0008040 3300046809 Bacteria 6465
168 Ga0495604_0000064 3300047317 Bacteria 91932
169 Ga0496101_0169710 3300048904 Bacteria 1676
170 Ga0496103_0007369 3300048906 Bacteria 6557
171 Ga0496104_0181357 3300048907 Bacteria 2016
172 Ga0496104_0182410 3300048907 Bacteria 2009
173 Ga0496105_0153418 3300048908 Bacteria 1892
174 Ga0496105_0267792 3300048908 Bacteria 1380
175 Ga0496111_0164759 3300048914 Bacteria 1646
176 Ga0496112_0209929 3300048915 Bacteria 1905
177 Ga0496113_0041632 3300048916 Bacteria 3391
178 Ga0496113_0068702 3300048916 Bacteria 2689
179 Ga0501031_0007474 3300049568 Bacteria 7117
180 Ga0501032_0095751 3300049569 Bacteria 1968
181 Ga0501036_0046971 3300049572 Bacteria 3656
182 Ga0501037_0061617 3300049573 Bacteria 2736
183 Ga0501038_0076270 3300049574 Bacteria 2832
184 Ga0501038_0084216 3300049574 Bacteria 2675
185 Ga0501039_0139881 3300049575 Bacteria 1901
186 Ga0501040_0095199 3300049576 Bacteria 2072
187 Ga0501041_0048213 3300049577 Bacteria 2594
188 Ga0501042_0001258 3300049578 Bacteria 14762
189 Ga0501046_0014295 3300049580 Bacteria 6704
190 Ga0501046_0055595 3300049580 Bacteria 3109
191 Ga0501047_0324273 3300049581 Bacteria 1379
192 Ga0501067_0041058 3300049583 Bacteria 2569
193 Ga0501069_0044475 3300049585 Bacteria 2459
194 Ga0501071_0002482 3300049587 Bacteria 11209
195 Ga0501072_0079344 3300049588 Bacteria 2599
196 Ga0501074_0111181 3300049590 Bacteria 1960
197 Ga0501076_0004945 3300049592 Bacteria 9540
198 Ga0501079_0077535 3300049741 Bacteria 2570
199 Ga0501080_0193917 3300049742 Bacteria 1866
200 Ga0501081_0016972 3300049743 Bacteria 4811
201 Ga0501035_0125859 3300049822 Bacteria 2237
202 Ga0501044_0110043 3300049823 Bacteria 2763
203 Ga0501045_0004501 3300049824 Bacteria 9631
204 nmdc:mga0yw44_25918_c1 3300050492 Bacteria 3342
205 nmdc:mga05p37_224996_c1 3300050507 Bacteria 2263
206 nmdc:mga05p37_8748_c1 3300050507 Bacteria 11962
207 nmdc:mga09592_177312_c1 3300050508 Bacteria 1843
208 nmdc:mga09592_3613_c1 3300050508 Bacteria 12479
209 nmdc:mga0qj67_10703_c1 3300050509 Bacteria 6856
210 nmdc:mga0qj67_147224_c1 3300050509 Bacteria 1909
211 nmdc:mga0qj67_1602_c1 3300050509 Bacteria 15920
212 nmdc:mga0qj67_16200_c1 3300050509 Bacteria 5648
213 nmdc:mga0qj67_263443_c1 3300050509 Bacteria 1398
214 nmdc:mga0qj67_3034_c1 3300050509 Bacteria 12064
215 nmdc:mga06r32_24953_c1 3300050510 Bacteria 5555
216 nmdc:mga06r32_54872_c1 3300050510 Bacteria 3821
217 nmdc:mga06r32_59678_c1 3300050510 Bacteria 3670
218 Ga0500573_0034142 3300053140 Bacteria 2934
219 Ga0501084_0014357 3300054114 Bacteria 6563
220 Ga0501082_0009564 3300060353 Bacteria 8342
221 Ga0466962_0005597 3300061719 Bacteria 6033
222 Ga0466962_0046860 3300061719 Bacteria 2066
223 Ga0530510_0087208 3300061734 Bacteria 2274
224 2559425468 2558860280 Bacteria 11429938
225 2644610365 2643221711 Bacteria 4865335
226 2676487754 2675903060 Bacteria 10051191
227 2809592083 2808606522 Bacteria 9488490
228 2812371755 2811994882 Bacteria 4688362
229 2819424957 2818991318 Bacteria 5266538
230 2819667331 2818991458 Bacteria 4794049
231 2819690651 2818991462 Bacteria 4320267
232 2819728040 2818991469 Bacteria 4644110
233 2856744806 2856741275 Bacteria 8096094
234 2873314635 2873314349 Bacteria 8512634
235 2884697720 2884693830 Bacteria 11273186
236 2891328390 2891326441 Bacteria 6439512
237 2891563626 2891562705 Bacteria 8039471
238 2895435562 2895427314 Bacteria 13147766
239 2895444822 2895442618 Bacteria 11027144
240 2917737159 2917736166 Bacteria 9690793
241 2995465729 2995463766 Bacteria 8577691
242 8047714969 8047710418 Bacteria 11023148
243 8055068816 8055066027 Bacteria 9479577
244 Ga0395898_0107236
245 JGI25406J46586_10000586
246 Ga0070658_10014605
247 Ga0068869_100016458
248 Ga0070680_100072297
249 Ga0070680_100110891
250 Ga0068868_100013224
251 Ga0070660_100051870
252 Ga0070661_100040850
253 Ga0070692_10021697
254 Ga0070675_100002806
255 Ga0070714_100000700
256 Ga0070700_100031746
257 Ga0070708_100002421
258 Ga0070708_100018706
259 Ga0070681_10119976
260 Ga0070706_100094482
261 Ga0070707_100005312
262 Ga0070707_100070697
263 Ga0070707_100237144
264 Ga0070698_100002154
265 Ga0070699_100036229
266 Ga0070699_100075942
267 Ga0068853_100030021
268 Ga0070665_100066431
269 Ga0068855_100033601
270 Ga0068857_100031409
271 Ga0068854_100001593
272 Ga0068859_100017472
273 Ga0068858_100050392
274 Ga0081455_10160830
275 Ga0081539_10000309
276 Ga0081539_10001291
277 Ga0070717_10279966
278 Ga0075365_10000533
279 Ga0075428_100001542
280 Ga0075428_100019117
281 Ga0075428_100042793
282 Ga0075428_100275065
283 Ga0075430_100004569
284 Ga0075430_100020334
285 Ga0075430_100029782
286 Ga0075430_100275989
287 Ga0075431_100011794
288 Ga0075431_100057582
289 Ga0075431_100059992
290 Ga0075429_100008925
291 Ga0075429_100166317
292 Ga0097620_100017472
293 Ga0111539_10162085
294 Ga0105245_10007371
295 Ga0105245_10102123
296 Ga0114129_10000344
297 Ga0114129_10039627
298 Ga0114129_10127818
299 Ga0114129_10133217
300 Ga0114129_10244608
301 Ga0114129_10369671
302 Ga0105241_10004541
303 Ga0105237_10010780
304 Ga0105238_10005439
305 Ga0105238_10005991
306 Ga0105238_10241596
307 Ga0105239_10048706
308 Ga0105239_10209115
309 Ga0157369_10008294
310 Ga0157369_10019241
311 Ga0157374_10064979
312 Ga0163163_10000657
313 Ga0163163_10008529
314 Ga0206353_11556898
315 Ga0207647_10006334
316 Ga0207705_10075020
317 Ga0207684_10041311
318 Ga0207654_10006354
319 Ga0207695_10001059
320 Ga0207671_10001032
321 Ga0207660_10129190
322 Ga0207657_10114272
323 Ga0207646_10011016
324 Ga0207646_10094293
325 Ga0207694_10001998
326 Ga0207659_10087415
327 Ga0207687_10112075
328 Ga0207706_10161029
329 Ga0207661_10045410
330 Ga0207640_10009091
331 Ga0207678_10046132
332 Ga0207708_10048627
333 Ga0207702_10066766
334 Ga0207674_10013193
335 Ga0207674_10035388
336 Ga0207428_10143575
337 Ga0268265_10312227
338 Ga0265336_10004921
339 Ga0307517_10053358
340 Ga0307515_10016557
341 Ga0265338_10032121
342 Ga0307511_10001104
343 Ga0307511_10067849
344 Ga0307513_10025232
345 Ga0316579_10007824
346 Ga0307516_10000963
347 Ga0307516_10013216
348 Ga0307406_10024742
349 Ga0307406_10036129
350 Ga0307406_10229318
351 Ga0307407_10055501
352 Ga0307409_100015361
353 Ga0307416_100014489
354 Ga0307416_100363306
355 Ga0307415_100210575
356 Ga0316583_10025686
357 Ga0316582_0031920
358 Ga0316584_0010899
359 Ga0395899_0083742
360 Ga0395899_0089670
361 Ga0395900_0055093
362 Ga0395900_0103826
363 Ga0395900_0151627
364 Ga0395900_0162261
365 Ga0395898_0047512
366 Ga0395898_0061970
367 Ga0395898_0090871
368 Ga0395898_0114637
369 Ga0395898_0321583
370 Ga0395898_0399094
371 Ga0395905_0111791
372 Ga0395905_0246953
373 Ga0436364_0634539
374 Ga0436364_0660352
375 Ga0395901_0004957
376 Ga0395901_0074700
377 Ga0395901_0108399
378 Ga0395901_0122146
379 Ga0395901_0281716
380 Ga0436365_0323089
381 Ga0436365_0571887
382 Ga0451853_1368066
383 Ga0466969_0006488
384 Ga0466969_0039778
385 Ga0466966_0033763
386 Ga0466961_0000990
387 Ga0466961_0004991
388 Ga0466961_0048703
389 Ga0466971_0006499
390 Ga0466970_0015158
391 Ga0466959_0014640
392 Ga0466959_0019755
393 Ga0466959_0087414
394 Ga0466958_0025726
395 Ga0466958_0042840
396 Ga0466958_0090473
397 Ga0466967_0194791
398 Ga0495592_0041231
399 Ga0495629_0212359
400 Ga0495651_0000447
401 Ga0495651_0007162
402 Ga0495651_0076727
403 Ga0495628_0025203
404 Ga0495652_0005551
405 Ga0495652_0014205
406 Ga0495652_0070209
407 Ga0495640_0064187
408 Ga0495613_0177492
409 Ga0495600_0001394
410 Ga0495600_0008040
411 Ga0495604_0000064
412 Ga0496101_0169710
413 Ga0496103_0007369
414 Ga0496104_0181357
415 Ga0496104_0182410
416 Ga0496105_0153418
417 Ga0496105_0267792
418 Ga0496111_0164759
419 Ga0496112_0209929
420 Ga0496113_0041632
421 Ga0496113_0068702
422 Ga0501031_0007474
423 Ga0501032_0095751
424 Ga0501036_0046971
425 Ga0501037_0061617
426 Ga0501038_0076270
427 Ga0501038_0084216
428 Ga0501039_0139881
429 Ga0501040_0095199
430 Ga0501041_0048213
431 Ga0501042_0001258
432 Ga0501046_0014295
433 Ga0501046_0055595
434 Ga0501047_0324273
435 Ga0501067_0041058
436 Ga0501069_0044475
437 Ga0501071_0002482
438 Ga0501072_0079344
439 Ga0501074_0111181
440 Ga0501076_0004945
441 Ga0501079_0077535
442 Ga0501080_0193917
443 Ga0501081_0016972
444 Ga0501035_0125859
445 Ga0501044_0110043
446 Ga0501045_0004501
447 nmdc:mga0yw44_25918_c1
448 nmdc:mga05p37_224996_c1
449 nmdc:mga05p37_8748_c1
450 nmdc:mga09592_177312_c1
451 nmdc:mga09592_3613_c1
452 nmdc:mga0qj67_10703_c1
453 nmdc:mga0qj67_147224_c1
454 nmdc:mga0qj67_1602_c1
455 nmdc:mga0qj67_16200_c1
456 nmdc:mga0qj67_263443_c1
457 nmdc:mga0qj67_3034_c1
458 nmdc:mga06r32_24953_c1
459 nmdc:mga06r32_54872_c1
460 nmdc:mga06r32_59678_c1
461 Ga0500573_0034142
462 Ga0501084_0014357
463 Ga0501082_0009564
464 Ga0466962_0005597
465 Ga0466962_0046860
466 Ga0530510_0087208
467 2559425468
468 2644610365
469 2676487754
470 2809592083
471 2812371755
472 2819424957
473 2819667331
474 2819690651
475 2819728040
476 2856744806
477 2873314635
478 2884697720
479 2891328390
480 2891563626
481 2895435562
482 2895444822
483 2917737159
484 2995465729
485 8047714969
486 8055068816

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

39

114

0.97

PF00152

tRNA-synt_2

tRNA synthetases class II (D, K and N)

133

450

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wyd-assembly1.cif.gz_A crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii 0.9341 11 416
1wyd-assembly1.cif.gz_B crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii 0.9314 11 416
1x54-assembly1.cif.gz_A crystal structure of asparaginyl-trna synthetase from pyrococcus horikoshii complexed with asparaginyl-adenylate 0.9222 1 416
1x54-assembly1.cif.gz_A crystal structure of asparaginyl-trna synthetase from pyrococcus horikoshii complexed with asparaginyl-adenylate 0.92 1 416
1b8a-assembly1.cif.gz_B aspartyl-trna synthetase 0.9186 1 416
ID Description Score Start End Superfamily
af_A0A0P0VEM7_155_352_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9524 110 253 3.30.930.10
5zg8A01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9437 2 97 2.40.50.140
3kfuA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9418 2 99 2.40.50.140
3kfuA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9321 2 99 2.40.50.140
af_Q75JQ1_224_576_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9308 106 416 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A2W2D876-F1-model_v4 Aspartate--tRNA(Asn) ligase 0.9807 1 98 GO:0003676
GO:0016874
AF-A0A2W2BPJ2-F1-model_v4 Aspartate--tRNA(Asn) ligase 0.9796 96 414 GO:0003723
GO:0004815
GO:0005524
GO:0005829
GO:0006422
GO:0017101
AF-A0A2W2D876-F1-model_v4 Aspartate--tRNA(Asn) ligase 0.9709 1 98 GO:0003676
GO:0016874
AF-A0A7H8XSM6-F1-model_v4 Aspartate--tRNA(Asp/Asn) ligase (EC 6.1.1.23) (Aspartyl-tRNA synthetase) (AspRS) (Non-discriminating aspartyl-tRNA synthetase) (ND-AspRS) 0.9695 1 416 GO:0003723
GO:0004815
GO:0005524
GO:0005829
GO:0006422
GO:0017101
GO:0050560
AF-A0A7V9F3H7-F1-model_v4 Aspartate--tRNA(Asp/Asn) ligase (EC 6.1.1.23) (Aspartyl-tRNA synthetase) (AspRS) (Non-discriminating aspartyl-tRNA synthetase) (ND-AspRS) 0.969 1 416 GO:0003723
GO:0004815
GO:0005524
GO:0005829
GO:0006422
GO:0017101
GO:0050560

Map