F355719

General Info

Members Datasets Scaffolds Average Seq Length
243 147 242 355

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10000209|Ga0265340_1000020930
Length 394
Sequence MLLNARFSFQPAICKPGHMLISELALFPKPERAILVRMYRTQDLNVKEIVRLLTPRELKAQSPATDAVNAVVARSRERVVRILRQEDPRLLVVIGPCSIHDEKSALEYAARLNALREQFADRLEIVMRVYFEKPRTTIGWKGLINDPHLDGSQDIEAGLKIARRLLLNITGLGLPAATEFLDPIVPQYIADLITWAAIGARTTESQTHREMASGLSMPVGLKNSTDGSLQIAIEAMGAARHPHSFLGIDQDGATSIVRTTGNPNTHIVLRGGRTQTNYDAESIRAAEAKLKSEKLPPVLMVDCSHANSGKQPARQEDVWRSVIQQRVAGARPLIGLMVESHFNEGNQPIPKNLADLRYGVSLTDACIGWETTERMLRWGHEALGKLSAKAVSAV

Samples

Sample ID Description Type Environment
1 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
65 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
66 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
67 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
80 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
83 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
84 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
85 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
86 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
87 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
91 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
147 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.94
Stem 0
Stem Tuber 0
Unclassified 2.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000107 3300002155 Bacteria 11520
2 rootH2_10010168 3300003320 Bacteria 11079
3 rootL2_10096893 3300003322 Bacteria 6056
4 Ga0070690_100053087 3300005330 Bacteria 2592
5 Ga0070690_100248041 3300005330 Bacteria 1258
6 Ga0070660_100151769 3300005339 Bacteria 1863
7 Ga0070689_100009177 3300005340 Bacteria 7004
8 Ga0070661_100000158 3300005344 Bacteria 55403
9 Ga0070688_100150113 3300005365 Bacteria 1592
10 Ga0070701_10003161 3300005438 Bacteria 6469
11 Ga0070694_100005127 3300005444 Bacteria 7900
12 Ga0070706_100108868 3300005467 Bacteria 2578
13 Ga0070698_100339795 3300005471 Bacteria 1433
14 Ga0070686_100052095 3300005544 Bacteria 2608
15 Ga0070665_100000005 3300005548 Bacteria 734905
16 Ga0070704_100015130 3300005549 Bacteria 4838
17 Ga0068855_100082489 3300005563 Bacteria 3726
18 Ga0068855_100124394 3300005563 Bacteria 2950
19 Ga0068857_100007639 3300005577 Bacteria 9313
20 Ga0068856_100025510 3300005614 Bacteria 5765
21 Ga0068856_100059966 3300005614 Bacteria 3759
22 Ga0068859_100096311 3300005617 Bacteria 3012
23 Ga0068863_100000614 3300005841 Bacteria 36138
24 Ga0068863_100035343 3300005841 Bacteria 4759
25 Ga0068863_100096292 3300005841 Bacteria 2810
26 Ga0068858_100007667 3300005842 Bacteria 10428
27 Ga0081538_10007284 3300005981 Bacteria 9588
28 Ga0081540_1014383 3300005983 Bacteria 5070
29 Ga0068871_100087274 3300006358 Bacteria 2593
30 Ga0075428_100005242 3300006844 Bacteria 14417
31 Ga0075428_100010987 3300006844 Bacteria 10071
32 Ga0075430_100139897 3300006846 Bacteria 2016
33 Ga0075430_100326474 3300006846 Bacteria 1268
34 Ga0075431_100038348 3300006847 Bacteria 4934
35 Ga0075431_100063625 3300006847 Bacteria 3807
36 Ga0075429_100057522 3300006880 Bacteria 3386
37 Ga0075429_100069468 3300006880 Bacteria 3067
38 Ga0075429_100129602 3300006880 Bacteria 2206
39 Ga0097620_100096311 3300006931 Bacteria 3012
40 Ga0105240_10004722 3300009093 Bacteria 20564
41 Ga0105240_10069788 3300009093 Bacteria 4349
42 Ga0111539_10170046 3300009094 Bacteria 2546
43 Ga0111539_10191460 3300009094 Bacteria 2387
44 Ga0111539_10514215 3300009094 Bacteria 1395
45 Ga0114129_10051567 3300009147 Bacteria 5776
46 Ga0114129_10244204 3300009147 Bacteria 2413
47 Ga0114129_10392921 3300009147 Bacteria 1829
48 Ga0105241_10256089 3300009174 Bacteria 1486
49 Ga0105248_10336050 3300009177 Bacteria 1701
50 Ga0105238_10112101 3300009551 Bacteria 2707
51 Ga0105238_10117858 3300009551 Bacteria 2635
52 Ga0105249_10097557 3300009553 Bacteria 2759
53 Ga0157378_10032362 3300013297 Bacteria 4621
54 Ga0157375_10000040 3300013308 Bacteria 164344
55 Ga0163163_10000138 3300014325 Bacteria 75256
56 Ga0163163_10068991 3300014325 Bacteria 3519
57 Ga0157379_10042928 3300014968 Bacteria 4038
58 Ga0157376_10252234 3300014969 Bacteria 1649
59 Ga0213875_10000119 3300021388 Bacteria 88296
60 Ga0207684_10029983 3300025910 Bacteria 4631
61 Ga0207695_10032715 3300025913 Bacteria 5686
62 Ga0207695_10037897 3300025913 Bacteria 5198
63 Ga0207663_10036257 3300025916 Bacteria 2966
64 Ga0207649_10000953 3300025920 Bacteria 17970
65 Ga0207694_10003955 3300025924 Bacteria 11691
66 Ga0207694_10071909 3300025924 Bacteria 2703
67 Ga0207694_10078923 3300025924 Bacteria 2581
68 Ga0207659_10181058 3300025926 Bacteria 1669
69 Ga0207706_10044898 3300025933 Bacteria 3915
70 Ga0207686_10092600 3300025934 Bacteria 1999
71 Ga0207670_10002033 3300025936 Bacteria 10630
72 Ga0207670_10330870 3300025936 Bacteria 1201
73 Ga0207667_10091238 3300025949 Bacteria 3147
74 Ga0207677_10376247 3300026023 Bacteria 1197
75 Ga0207703_10001938 3300026035 Bacteria 18316
76 Ga0207702_10001019 3300026078 Bacteria 28776
77 Ga0207702_10036771 3300026078 Bacteria 4096
78 Ga0207641_10162483 3300026088 Bacteria 2031
79 Ga0207641_10263357 3300026088 Bacteria 1615
80 Ga0207641_10306655 3300026088 Bacteria 1501
81 Ga0207674_10070328 3300026116 Bacteria 3519
82 Ga0268266_10000012 3300028379 Bacteria 734912
83 Ga0268264_10498484 3300028381 Bacteria 1187
84 Ga0265337_1000140 3300028556 Bacteria 36107
85 Ga0265337_1000508 3300028556 Bacteria 20699
86 Ga0265337_1003863 3300028556 Bacteria 6360
87 Ga0265337_1010568 3300028556 Bacteria 3227
88 Ga0265326_10001448 3300028558 Bacteria 8355
89 Ga0265326_10007804 3300028558 Bacteria 3261
90 Ga0265326_10010443 3300028558 Bacteria 2753
91 Ga0265326_10024202 3300028558 Bacteria 1734
92 Ga0265319_1000051 3300028563 Bacteria 97169
93 Ga0265334_10003734 3300028573 Bacteria 6883
94 Ga0265318_10043509 3300028577 Bacteria 1701
95 Ga0265323_10002628 3300028653 Bacteria 8139
96 Ga0265323_10023837 3300028653 Bacteria 2331
97 Ga0265336_10001284 3300028666 Bacteria 11831
98 Ga0265336_10016766 3300028666 Bacteria 2393
99 Ga0265336_10036496 3300028666 Bacteria 1513
100 Ga0265338_10000111 3300028800 Bacteria 151469
101 Ga0265338_10000431 3300028800 Bacteria 75210
102 Ga0265338_10000433 3300028800 Bacteria 75181
103 Ga0265338_10001555 3300028800 Bacteria 37061
104 Ga0265338_10002166 3300028800 Bacteria 30168
105 Ga0265338_10002793 3300028800 Bacteria 25528
106 Ga0265338_10005897 3300028800 Bacteria 15796
107 Ga0265338_10011538 3300028800 Bacteria 10188
108 Ga0265338_10011871 3300028800 Bacteria 10005
109 Ga0265338_10029886 3300028800 Bacteria 5390
110 Ga0265338_10033039 3300028800 Bacteria 5030
111 Ga0265338_10037612 3300028800 Bacteria 4602
112 Ga0265338_10047575 3300028800 Bacteria 3916
113 Ga0265338_10164800 3300028800 Bacteria 1707
114 Ga0265324_10001076 3300029957 Bacteria 16439
115 Ga0265324_10001521 3300029957 Bacteria 13070
116 Ga0265324_10003019 3300029957 Bacteria 8225
117 Ga0265324_10014149 3300029957 Bacteria 2959
118 Ga0265320_10000583 3300031240 Bacteria 28117
119 Ga0265320_10006431 3300031240 Bacteria 7408
120 Ga0265320_10018761 3300031240 Bacteria 3800
121 Ga0265325_10010026 3300031241 Bacteria 5506
122 Ga0265325_10010354 3300031241 Bacteria 5404
123 Ga0265325_10020481 3300031241 Bacteria 3646
124 Ga0265340_10000209 3300031247 Bacteria 29637
125 Ga0265339_10031212 3300031249 Bacteria 3012
126 Ga0265339_10032660 3300031249 Bacteria 2935
127 Ga0265327_10001221 3300031251 Bacteria 34572
128 Ga0265327_10013449 3300031251 Bacteria 5434
129 Ga0265327_10046648 3300031251 Bacteria 2291
130 Ga0265316_10001861 3300031344 Bacteria 22187
131 Ga0265316_10065736 3300031344 Bacteria 2808
132 Ga0265316_10092923 3300031344 Bacteria 2299
133 Ga0265316_10129900 3300031344 Bacteria 1898
134 Ga0265316_10203001 3300031344 Bacteria 1469
135 Ga0265313_10001377 3300031595 Bacteria 22818
136 Ga0265313_10017013 3300031595 Bacteria 4154
137 Ga0265314_10007901 3300031711 Bacteria 9178
138 Ga0265314_10089548 3300031711 Bacteria 2007
139 Ga0265342_10056869 3300031712 Bacteria 2317
140 Ga0316576_10331708 3300031727 Bacteria 1134
141 Ga0316577_10033656 3300031733 Bacteria 2863
142 Ga0307414_10251765 3300032004 Bacteria 1469
143 Ga0373930_0002445 3300034816 Bacteria 2872
144 Ga0373928_0000104 3300035084 Bacteria 15036
145 Ga0373929_0000194 3300035085 Bacteria 10890
146 Ga0373944_0001213 3300035089 Bacteria 6454
147 Ga0373949_0004116 3300035090 Bacteria 3364
148 Ga0373932_0000004 3300035112 Bacteria 412176
149 Ga0373953_0021305 3300035117 Bacteria 2430
150 Ga0373956_0003587 3300035119 Bacteria 6260
151 Ga0373962_0000984 3300035242 Bacteria 6582
152 Ga0373931_0000036 3300035691 Bacteria 79351
153 Ga0373933_0035038 3300035724 Bacteria 2929
154 Ga0373937_0000950 3300036401 Bacteria 24652
155 Ga0373937_0075743 3300036401 Bacteria 3107
156 Ga0373937_0264692 3300036401 Bacteria 1622
157 Ga0373925_0000171 3300037068 Bacteria 70398
158 Ga0395899_0000009 3300037312 Bacteria 538632
159 Ga0395898_0000050 3300037466 Bacteria 283059
160 Ga0395905_0000167 3300037471 Bacteria 107775
161 Ga0436364_0872792 3300037853 Bacteria 88446
162 Ga0395901_0025290 3300038443 Bacteria 6095
163 Ga0451577_0000347 3300042876 Bacteria 86343
164 Ga0451577_0119030 3300042876 Bacteria 2365
165 Ga0453684_0002857 3300044712 Bacteria 40610
166 Ga0453684_0011133 3300044712 Bacteria 15173
167 Ga0453684_0195850 3300044712 Bacteria 2360
168 Ga0453684_0285088 3300044712 Bacteria 1882
169 Ga0453684_0655305 3300044712 Bacteria 1145
170 Ga0466957_0007669 3300044842 Bacteria 6103
171 Ga0451576_0051518 3300045051 Bacteria 4316
172 Ga0451576_0133704 3300045051 Bacteria 2586
173 Ga0451576_0179301 3300045051 Bacteria 2212
174 Ga0451576_0187964 3300045051 Bacteria 2157
175 Ga0451576_0205571 3300045051 Bacteria 2056
176 Ga0451576_0300893 3300045051 Bacteria 1678
177 Ga0466967_0026594 3300045976 Bacteria 4795
178 Ga0495592_0000257 3300046454 Bacteria 45540
179 Ga0495629_0016596 3300046459 Bacteria 5286
180 Ga0495618_0001112 3300046514 Bacteria 18203
181 Ga0495618_0001621 3300046514 Bacteria 15042
182 Ga0495628_0003775 3300046516 Bacteria 13482
183 Ga0495628_0132991 3300046516 Bacteria 1902
184 Ga0495628_0289678 3300046516 Bacteria 1214
185 Ga0495630_0010965 3300046517 Bacteria 6550
186 Ga0495666_0017076 3300046526 Bacteria 3614
187 Ga0495652_0043199 3300046529 Bacteria 3884
188 Ga0495640_0014241 3300046533 Bacteria 6028
189 Ga0495640_0039248 3300046533 Bacteria 3324
190 Ga0495586_0000468 3300046535 Bacteria 24169
191 Ga0495586_0004779 3300046535 Bacteria 7242
192 Ga0495645_0008155 3300046543 Bacteria 7302
193 Ga0495645_0100789 3300046543 Bacteria 2054
194 Ga0495667_0008638 3300046559 Bacteria 6917
195 Ga0495667_0064939 3300046559 Bacteria 2387
196 Ga0495634_0001961 3300046642 Bacteria 17566
197 Ga0495613_0000225 3300046689 Bacteria 54141
198 Ga0495624_0039566 3300046690 Bacteria 3022
199 Ga0495674_0035519 3300047319 Bacteria 4495
200 Ga0495680_0020338 3300047322 Bacteria 5587
201 Ga0495684_0070450 3300047471 Bacteria 2658
202 Ga0501031_0000196 3300049568 Bacteria 34298
203 Ga0501031_0000211 3300049568 Bacteria 33324
204 Ga0501032_0000359 3300049569 Bacteria 37996
205 Ga0501033_0000072 3300049570 Bacteria 95370
206 Ga0501033_0000909 3300049570 Bacteria 27041
207 Ga0501033_0001416 3300049570 Bacteria 21301
208 Ga0501036_0181977 3300049572 Bacteria 1769
209 Ga0501037_0000073 3300049573 Bacteria 93756
210 Ga0501037_0057539 3300049573 Bacteria 2838
211 Ga0501038_0001837 3300049574 Bacteria 19631
212 Ga0501039_0001009 3300049575 Bacteria 20516
213 Ga0501039_0088718 3300049575 Bacteria 2409
214 Ga0501039_0179159 3300049575 Bacteria 1667
215 Ga0501042_0147887 3300049578 Bacteria 1694
216 Ga0501043_0000522 3300049579 Bacteria 34575
217 Ga0501043_0001291 3300049579 Bacteria 21976
218 Ga0501043_0072262 3300049579 Bacteria 2710
219 Ga0501047_0005186 3300049581 Bacteria 12228
220 Ga0501070_0001365 3300049586 Bacteria 21863
221 Ga0501072_0119647 3300049588 Bacteria 2098
222 Ga0501075_0131759 3300049591 Bacteria 1905
223 Ga0501076_0113944 3300049592 Bacteria 2188
224 Ga0501076_0204062 3300049592 Bacteria 1615
225 Ga0501080_0011640 3300049742 Bacteria 8054
226 Ga0501081_0102265 3300049743 Bacteria 2027
227 Ga0501035_0000002 3300049822 Bacteria 585447
228 Ga0501035_0046365 3300049822 Bacteria 3909
229 Ga0501035_0118826 3300049822 Bacteria 2312
230 Ga0501044_0000125 3300049823 Bacteria 92969
231 Ga0501044_0001262 3300049823 Bacteria 29942
232 Ga0501044_0037997 3300049823 Bacteria 5030
233 nmdc:mga05p37_28316_c1 3300050507 Bacteria 6832
234 nmdc:mga09592_112525_c1 3300050508 Bacteria 2335
235 nmdc:mga0qj67_252543_c1 3300050509 Bacteria 1431
236 nmdc:mga0qj67_97359_c1 3300050509 Bacteria 2369
237 nmdc:mga06r32_33570_c1 3300050510 Bacteria 4834
238 nmdc:mga08y16_10260_c1 3300050511 Bacteria 9832
239 nmdc:mga08y16_173860_c1 3300050511 Bacteria 2236
240 Ga0501084_0117257 3300054114 Bacteria 2239
241 Ga0501082_0326154 3300060353 Bacteria 1338
242 Ga0466962_0000055 3300061719 Bacteria 46735

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046526 Ga0495666_0017076 Ga0495666_0017076_85_1056 306
2 3300005471 Ga0070698_100339795 Ga0070698_1003397951 314
3 3300026116 Ga0207674_10070328 Ga0207674_100703282 314
4 3300050509 nmdc:mga0qj67_252543_c1 nmdc:mga0qj67_252543_c1_153_1127 314
5 3300050509 nmdc:mga0qj67_97359_c1 nmdc:mga0qj67_97359_c1_1374_2348 314
6 3300044712 Ga0453684_0655305 Ga0453684_0655305_12_1046 315
7 3300005330 Ga0070690_100248041 Ga0070690_1002480411 326
8 3300005340 Ga0070689_100009177 Ga0070689_1000091773 326
9 3300005841 Ga0068863_100096292 Ga0068863_1000962922 326
10 3300025936 Ga0207670_10002033 Ga0207670_100020337 326
11 3300026088 Ga0207641_10306655 Ga0207641_103066551 326
12 3300028653 Ga0265323_10002628 Ga0265323_100026285 328
13 3300029957 Ga0265324_10003019 Ga0265324_100030192 328
14 3300031344 Ga0265316_10065736 Ga0265316_100657364 328
15 3300005548 Ga0070665_100000005 Ga0070665_100000005460 334
16 3300005841 Ga0068863_100000614 Ga0068863_10000061435 334
17 3300005842 Ga0068858_100007667 Ga0068858_1000076677 334
18 3300009093 Ga0105240_10004722 Ga0105240_1000472214 334
19 3300025913 Ga0207695_10032715 Ga0207695_100327152 334
20 3300026035 Ga0207703_10001938 Ga0207703_1000193814 334
21 3300026088 Ga0207641_10162483 Ga0207641_101624831 334
22 3300028379 Ga0268266_10000012 Ga0268266_10000012192 334
23 3300031727 Ga0316576_10331708 Ga0316576_103317081 334
24 3300031733 Ga0316577_10033656 Ga0316577_100336563 334
25 iso_pu_bacteria 2867302475 2867307021 334
26 3300003320 rootH2_10010168 rootH2_100101684 335
27 3300005330 Ga0070690_100053087 Ga0070690_1000530872 335
28 3300005365 Ga0070688_100150113 Ga0070688_1001501132 335
29 3300005438 Ga0070701_10003161 Ga0070701_100031613 335
30 3300005444 Ga0070694_100005127 Ga0070694_1000051272 335
31 3300005467 Ga0070706_100108868 Ga0070706_1001088682 335
32 3300005544 Ga0070686_100052095 Ga0070686_1000520953 335
33 3300005549 Ga0070704_100015130 Ga0070704_1000151302 335
34 3300005563 Ga0068855_100082489 Ga0068855_1000824893 335
35 3300005563 Ga0068855_100124394 Ga0068855_1001243943 335
36 3300005577 Ga0068857_100007639 Ga0068857_1000076395 335
37 3300005614 Ga0068856_100025510 Ga0068856_1000255102 335
38 3300005614 Ga0068856_100059966 Ga0068856_1000599663 335
39 3300005617 Ga0068859_100096311 Ga0068859_1000963112 335
40 3300005841 Ga0068863_100035343 Ga0068863_1000353433 335
41 3300005981 Ga0081538_10007284 Ga0081538_100072847 335
42 3300005983 Ga0081540_1014383 Ga0081540_10143834 335
43 3300006358 Ga0068871_100087274 Ga0068871_1000872741 335
44 3300006844 Ga0075428_100005242 Ga0075428_1000052427 335
45 3300006844 Ga0075428_100010987 Ga0075428_1000109876 335
46 3300006846 Ga0075430_100139897 Ga0075430_1001398973 335
47 3300006846 Ga0075430_100326474 Ga0075430_1003264741 335
48 3300006847 Ga0075431_100038348 Ga0075431_1000383482 335
49 3300006847 Ga0075431_100063625 Ga0075431_1000636254 335
50 3300006880 Ga0075429_100057522 Ga0075429_1000575222 335
51 3300006880 Ga0075429_100069468 Ga0075429_1000694681 335
52 3300006880 Ga0075429_100129602 Ga0075429_1001296022 335
53 3300006931 Ga0097620_100096311 Ga0097620_1000963112 335
54 3300009093 Ga0105240_10069788 Ga0105240_100697884 335
55 3300009094 Ga0111539_10170046 Ga0111539_101700464 335
56 3300009094 Ga0111539_10191460 Ga0111539_101914602 335
57 3300009147 Ga0114129_10051567 Ga0114129_100515672 335
58 3300009147 Ga0114129_10244204 Ga0114129_102442042 335
59 3300009147 Ga0114129_10392921 Ga0114129_103929212 335
60 3300009174 Ga0105241_10256089 Ga0105241_102560891 335
61 3300009177 Ga0105248_10336050 Ga0105248_103360502 335
62 3300009551 Ga0105238_10112101 Ga0105238_101121012 335
63 3300009551 Ga0105238_10117858 Ga0105238_101178582 335
64 3300009553 Ga0105249_10097557 Ga0105249_100975572 335
65 3300013308 Ga0157375_10000040 Ga0157375_1000004049 335
66 3300014325 Ga0163163_10000138 Ga0163163_1000013825 335
67 3300014325 Ga0163163_10068991 Ga0163163_100689911 335
68 3300014968 Ga0157379_10042928 Ga0157379_100429283 335
69 3300014969 Ga0157376_10252234 Ga0157376_102522342 335
70 3300021388 Ga0213875_10000119 Ga0213875_1000011956 335
71 3300025910 Ga0207684_10029983 Ga0207684_100299834 335
72 3300025913 Ga0207695_10037897 Ga0207695_100378972 335
73 3300025916 Ga0207663_10036257 Ga0207663_100362572 335
74 3300025924 Ga0207694_10003955 Ga0207694_100039554 335
75 3300025924 Ga0207694_10071909 Ga0207694_100719092 335
76 3300025924 Ga0207694_10078923 Ga0207694_100789232 335
77 3300025926 Ga0207659_10181058 Ga0207659_101810582 335
78 3300025934 Ga0207686_10092600 Ga0207686_100926001 335
79 3300025949 Ga0207667_10091238 Ga0207667_100912382 335
80 3300026023 Ga0207677_10376247 Ga0207677_103762471 335
81 3300026078 Ga0207702_10036771 Ga0207702_100367714 335
82 3300026088 Ga0207641_10263357 Ga0207641_102633571 335
83 3300028556 Ga0265337_1000140 Ga0265337_10001402 335
84 3300028556 Ga0265337_1000508 Ga0265337_10005083 335
85 3300028556 Ga0265337_1003863 Ga0265337_10038637 335
86 3300028556 Ga0265337_1010568 Ga0265337_10105682 335
87 3300028558 Ga0265326_10001448 Ga0265326_100014482 335
88 3300028558 Ga0265326_10007804 Ga0265326_100078042 335
89 3300028558 Ga0265326_10010443 Ga0265326_100104432 335
90 3300028558 Ga0265326_10024202 Ga0265326_100242022 335
91 3300028563 Ga0265319_1000051 Ga0265319_100005133 335
92 3300028573 Ga0265334_10003734 Ga0265334_100037347 335
93 3300028577 Ga0265318_10043509 Ga0265318_100435092 335
94 3300028653 Ga0265323_10023837 Ga0265323_100238372 335
95 3300028666 Ga0265336_10001284 Ga0265336_100012849 335
96 3300028666 Ga0265336_10016766 Ga0265336_100167663 335
97 3300028666 Ga0265336_10036496 Ga0265336_100364962 335
98 3300028800 Ga0265338_10000111 Ga0265338_1000011155 335
99 3300028800 Ga0265338_10000431 Ga0265338_1000043137 335
100 3300028800 Ga0265338_10000433 Ga0265338_1000043316 335
101 3300028800 Ga0265338_10001555 Ga0265338_1000155536 335
102 3300028800 Ga0265338_10002166 Ga0265338_1000216638 335
103 3300028800 Ga0265338_10002793 Ga0265338_1000279316 335
104 3300028800 Ga0265338_10005897 Ga0265338_100058972 335
105 3300028800 Ga0265338_10011538 Ga0265338_1001153814 335
106 3300028800 Ga0265338_10011871 Ga0265338_100118719 335
107 3300028800 Ga0265338_10029886 Ga0265338_100298861 335
108 3300028800 Ga0265338_10033039 Ga0265338_100330393 335
109 3300028800 Ga0265338_10037612 Ga0265338_100376124 335
110 3300028800 Ga0265338_10047575 Ga0265338_100475754 335
111 3300028800 Ga0265338_10164800 Ga0265338_101648002 335
112 3300029957 Ga0265324_10001076 Ga0265324_100010766 335
113 3300029957 Ga0265324_10001521 Ga0265324_100015216 335
114 3300029957 Ga0265324_10014149 Ga0265324_100141492 335
115 3300031240 Ga0265320_10000583 Ga0265320_1000058311 335
116 3300031240 Ga0265320_10006431 Ga0265320_100064311 335
117 3300031240 Ga0265320_10018761 Ga0265320_100187613 335
118 3300031241 Ga0265325_10010026 Ga0265325_100100264 335
119 3300031241 Ga0265325_10010354 Ga0265325_100103542 335
120 3300031241 Ga0265325_10020481 Ga0265325_100204812 335
121 3300031247 Ga0265340_10000209 Ga0265340_1000020930 335
122 3300031249 Ga0265339_10031212 Ga0265339_100312122 335
123 3300031249 Ga0265339_10032660 Ga0265339_100326602 335
124 3300031251 Ga0265327_10001221 Ga0265327_100012212 335
125 3300031251 Ga0265327_10013449 Ga0265327_100134493 335
126 3300031251 Ga0265327_10046648 Ga0265327_100466482 335
127 3300031344 Ga0265316_10001861 Ga0265316_100018616 335
128 3300031344 Ga0265316_10092923 Ga0265316_100929232 335
129 3300031344 Ga0265316_10129900 Ga0265316_101299002 335
130 3300031344 Ga0265316_10203001 Ga0265316_102030012 335
131 3300031595 Ga0265313_10001377 Ga0265313_100013774 335
132 3300031595 Ga0265313_10017013 Ga0265313_100170132 335
133 3300031711 Ga0265314_10007901 Ga0265314_100079012 335
134 3300031711 Ga0265314_10089548 Ga0265314_100895481 335
135 3300031712 Ga0265342_10056869 Ga0265342_100568692 335
136 3300034816 Ga0373930_0002445 Ga0373930_0002445_1654_2703 335
137 3300035084 Ga0373928_0000104 Ga0373928_0000104_10710_11759 335
138 3300035085 Ga0373929_0000194 Ga0373929_0000194_6866_7915 335
139 3300035089 Ga0373944_0001213 Ga0373944_0001213_2606_3655 335
140 3300035090 Ga0373949_0004116 Ga0373949_0004116_790_1839 335
141 3300035112 Ga0373932_0000004 Ga0373932_0000004_220058_221107 335
142 3300035117 Ga0373953_0021305 Ga0373953_0021305_432_1508 335
143 3300035119 Ga0373956_0003587 Ga0373956_0003587_1368_2453 335
144 3300035242 Ga0373962_0000984 Ga0373962_0000984_2391_3440 335
145 3300035691 Ga0373931_0000036 Ga0373931_0000036_29904_30953 335
146 3300035724 Ga0373933_0035038 Ga0373933_0035038_1148_2233 335
147 3300036401 Ga0373937_0000950 Ga0373937_0000950_8989_10074 335
148 3300036401 Ga0373937_0075743 Ga0373937_0075743_642_1718 335
149 3300036401 Ga0373937_0264692 Ga0373937_0264692_135_1208 335
150 3300037068 Ga0373925_0000171 Ga0373925_0000171_14655_15704 335
151 3300037853 Ga0436364_0872792 Ga0436364_0872792_50593_51642 335
152 3300042876 Ga0451577_0000347 Ga0451577_0000347_10373_11443 335
153 3300042876 Ga0451577_0119030 Ga0451577_0119030_745_1818 335
154 3300044712 Ga0453684_0002857 Ga0453684_0002857_27476_28531 335
155 3300044712 Ga0453684_0011133 Ga0453684_0011133_10629_11699 335
156 3300044712 Ga0453684_0195850 Ga0453684_0195850_235_1308 335
157 3300044712 Ga0453684_0285088 Ga0453684_0285088_776_1858 335
158 3300045051 Ga0451576_0051518 Ga0451576_0051518_2842_3915 335
159 3300045051 Ga0451576_0133704 Ga0451576_0133704_1412_2491 335
160 3300045051 Ga0451576_0179301 Ga0451576_0179301_548_1621 335
161 3300045051 Ga0451576_0187964 Ga0451576_0187964_734_1873 335
162 3300045051 Ga0451576_0205571 Ga0451576_0205571_954_2030 335
163 3300045051 Ga0451576_0300893 Ga0451576_0300893_112_1158 335
164 3300046454 Ga0495592_0000257 Ga0495592_0000257_26358_27470 335
165 3300046459 Ga0495629_0016596 Ga0495629_0016596_3781_4866 335
166 3300046514 Ga0495618_0001112 Ga0495618_0001112_8557_9642 335
167 3300046514 Ga0495618_0001621 Ga0495618_0001621_1364_2476 335
168 3300046516 Ga0495628_0003775 Ga0495628_0003775_9209_10321 335
169 3300046516 Ga0495628_0132991 Ga0495628_0132991_381_1454 335
170 3300046516 Ga0495628_0289678 Ga0495628_0289678_83_1156 335
171 3300046517 Ga0495630_0010965 Ga0495630_0010965_4068_5180 335
172 3300046529 Ga0495652_0043199 Ga0495652_0043199_891_2003 335
173 3300046533 Ga0495640_0014241 Ga0495640_0014241_3397_4509 335
174 3300046533 Ga0495640_0039248 Ga0495640_0039248_1947_3023 335
175 3300046535 Ga0495586_0000468 Ga0495586_0000468_10193_11305 335
176 3300046535 Ga0495586_0004779 Ga0495586_0004779_4241_5326 335
177 3300046543 Ga0495645_0008155 Ga0495645_0008155_2996_4108 335
178 3300046543 Ga0495645_0100789 Ga0495645_0100789_148_1230 335
179 3300046559 Ga0495667_0008638 Ga0495667_0008638_5031_6116 335
180 3300046559 Ga0495667_0064939 Ga0495667_0064939_975_2051 335
181 3300046642 Ga0495634_0001961 Ga0495634_0001961_7925_9010 335
182 3300046689 Ga0495613_0000225 Ga0495613_0000225_36488_37573 335
183 3300046690 Ga0495624_0039566 Ga0495624_0039566_253_1365 335
184 3300047319 Ga0495674_0035519 Ga0495674_0035519_2024_3136 335
185 3300047322 Ga0495680_0020338 Ga0495680_0020338_2425_3510 335
186 3300047471 Ga0495684_0070450 Ga0495684_0070450_369_1454 335
187 3300049568 Ga0501031_0000211 Ga0501031_0000211_8153_9205 335
188 3300049570 Ga0501033_0001416 Ga0501033_0001416_1740_2792 335
189 3300049572 Ga0501036_0181977 Ga0501036_0181977_14_1063 335
190 3300049573 Ga0501037_0057539 Ga0501037_0057539_66_1118 335
191 3300049575 Ga0501039_0088718 Ga0501039_0088718_1258_2310 335
192 3300049575 Ga0501039_0179159 Ga0501039_0179159_602_1654 335
193 3300049578 Ga0501042_0147887 Ga0501042_0147887_167_1219 335
194 3300049579 Ga0501043_0072262 Ga0501043_0072262_1420_2472 335
195 3300049588 Ga0501072_0119647 Ga0501072_0119647_299_1354 335
196 3300049591 Ga0501075_0131759 Ga0501075_0131759_722_1774 335
197 3300049592 Ga0501076_0113944 Ga0501076_0113944_1081_2160 335
198 3300049592 Ga0501076_0204062 Ga0501076_0204062_136_1188 335
199 3300049742 Ga0501080_0011640 Ga0501080_0011640_3748_4800 335
200 3300049743 Ga0501081_0102265 Ga0501081_0102265_880_1935 335
201 3300049822 Ga0501035_0046365 Ga0501035_0046365_1894_2946 335
202 3300049822 Ga0501035_0118826 Ga0501035_0118826_19_1068 335
203 3300049823 Ga0501044_0000125 Ga0501044_0000125_85089_86141 335
204 3300049823 Ga0501044_0037997 Ga0501044_0037997_2434_3486 335
205 3300050507 nmdc:mga05p37_28316_c1 nmdc:mga05p37_28316_c1_2424_3476 335
206 3300050508 nmdc:mga09592_112525_c1 nmdc:mga09592_112525_c1_154_1203 335
207 3300050510 nmdc:mga06r32_33570_c1 nmdc:mga06r32_33570_c1_1044_2135 335
208 3300050511 nmdc:mga08y16_173860_c1 nmdc:mga08y16_173860_c1_89_1150 335
209 3300054114 Ga0501084_0117257 Ga0501084_0117257_869_1921 335
210 3300060353 Ga0501082_0326154 Ga0501082_0326154_200_1252 335
211 3300002155 JGI24033J26618_1000107 JGI24033J26618_10001072 337
212 3300003322 rootL2_10096893 rootL2_100968933 337
213 3300005339 Ga0070660_100151769 Ga0070660_1001517692 337
214 3300005344 Ga0070661_100000158 Ga0070661_10000015820 337
215 3300009094 Ga0111539_10514215 Ga0111539_105142151 337
216 3300013297 Ga0157378_10032362 Ga0157378_100323622 337
217 3300025920 Ga0207649_10000953 Ga0207649_1000095312 337
218 3300025933 Ga0207706_10044898 Ga0207706_100448983 337
219 3300025936 Ga0207670_10330870 Ga0207670_103308701 337
220 3300026078 Ga0207702_10001019 Ga0207702_100010199 337
221 3300028381 Ga0268264_10498484 Ga0268264_104984842 337
222 3300032004 Ga0307414_10251765 Ga0307414_102517652 337
223 3300037312 Ga0395899_0000009 Ga0395899_0000009_34206_35285 337
224 3300037466 Ga0395898_0000050 Ga0395898_0000050_269422_270501 337
225 3300037471 Ga0395905_0000167 Ga0395905_0000167_32717_33790 337
226 3300038443 Ga0395901_0025290 Ga0395901_0025290_689_1765 337
227 3300044842 Ga0466957_0007669 Ga0466957_0007669_2299_3384 337
228 3300045976 Ga0466967_0026594 Ga0466967_0026594_3691_4776 337
229 3300049568 Ga0501031_0000196 Ga0501031_0000196_13997_15082 337
230 3300049569 Ga0501032_0000359 Ga0501032_0000359_29782_30855 337
231 3300049570 Ga0501033_0000072 Ga0501033_0000072_29801_30874 337
232 3300049570 Ga0501033_0000909 Ga0501033_0000909_16165_17250 337
233 3300049573 Ga0501037_0000073 Ga0501037_0000073_82637_83722 337
234 3300049574 Ga0501038_0001837 Ga0501038_0001837_9669_10742 337
235 3300049575 Ga0501039_0001009 Ga0501039_0001009_7610_8695 337
236 3300049579 Ga0501043_0000522 Ga0501043_0000522_3014_4099 337
237 3300049579 Ga0501043_0001291 Ga0501043_0001291_3014_4099 337
238 3300049581 Ga0501047_0005186 Ga0501047_0005186_9088_10173 337
239 3300049586 Ga0501070_0001365 Ga0501070_0001365_12104_13189 337
240 3300049822 Ga0501035_0000002 Ga0501035_0000002_179489_180574 337
241 3300049823 Ga0501044_0001262 Ga0501044_0001262_14723_15808 337
242 3300050511 nmdc:mga08y16_10260_c1 nmdc:mga08y16_10260_c1_4611_5660 337
243 3300061719 Ga0466962_0000055 Ga0466962_0000055_42529_43614 337

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00793

DAHP_synth_1

DAHP synthetase I family

62

377

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8e0y-assembly1.cif.gz_D dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase complexed with dahp oxime, pr(iii), and pi in unbound:(bound)2:other conformations 0.9838 3 336
8e0t-assembly1.cif.gz_D dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase complexed with dahp oxime in unbound:(bound)2:other conformations 0.9837 3 336
1qr7-assembly1.cif.gz_C crystal structure of phenylalanine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from escherichia coli complexed with pb2+ and pep 0.9817 4 336
8e0u-assembly1.cif.gz_C dahp (3-deoxy-d-arabinoheptulosonate-7-phosphate) synthase complexed with sulfate in unbound:(bound)2:other conformations 0.9813 3 336
1gg1-assembly1.cif.gz_A crystal structure analysis of dahp synthase in complex with mn2+ and 2-phosphoglycolate 0.9806 3 336
ID Description Score Start End Superfamily
6aglB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9692 6 336 3.20.20.70
1ofpA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9574 2 336 3.20.20.70
1of6A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9455 1 336 3.20.20.70
1of6A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9373 1 336 3.20.20.70
6aglB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9366 6 336 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A3B8WSB9-F1-model_v4 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (DAHP synthase) (Phospho-2-keto-3-deoxyheptonate aldolase) 0.9978 142 278 GO:0003849
GO:0005737
GO:0008652
GO:0009073
GO:0009423
AF-A0A2N5DSK0-F1-model_v4 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (DAHP synthase) (Phospho-2-keto-3-deoxyheptonate aldolase) 0.9966 157 275 GO:0003849
GO:0005737
GO:0008652
GO:0009073
GO:0009423
AF-A0A837AP79-F1-model_v4 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (DAHP synthase) (Phospho-2-keto-3-deoxyheptonate aldolase) 0.996 136 246 GO:0003849
GO:0005737
GO:0008652
GO:0009073
GO:0009423
AF-A4P0E6-F1-model_v4 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (DAHP synthase) (Phospho-2-keto-3-deoxyheptonate aldolase) 0.9949 172 278 GO:0003849
GO:0005737
GO:0008652
GO:0009073
GO:0009423
AF-A0A355VAM6-F1-model_v4 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (DAHP synthase) (Phospho-2-keto-3-deoxyheptonate aldolase) 0.9939 170 268 GO:0003849
GO:0005737
GO:0008652
GO:0009073
GO:0009423

Feature Viewer

pLDDT pTM Quality
93.8 0.92 High
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Predicted Structure (AlphaFold2)

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