F353545

General Info

Members Datasets Scaffolds Average Seq Length
241 130 241 494

Family's Representative Sequence

Representative Sequence 3300005439|Ga0070711_100045173|Ga0070711_1000451731
Length 514
Sequence VLWLVLYRSRHFFIGQHTMIYVHSLGRAFRYYTQRTALAVDGAAVSFKALHERVRNTAAALAANGFAAGDRLALLLPNSPEYIGLVYACSWLGVTAVPINARLSSAEIDQVLLDAKPRGLVRHSSLPKPAVQLPWQFVLDEKPLEVRKDSCPDPVYDPEAIVALIYTSGTTGRPKGVMVTHANILANVDHFSYWMGYREGGVYLHAAPIFHIADFPAMFAAPAFGARQVTIPKFTPQGFCELVQRERVTHTVLVPTMLNLLTQMPEGKPYDLSSLEVLAYGGSPMAPELVHRVRNLLPSVKLLQSYGLSETGFLTGLEDKEHVEGKLLSCGRPCPGIDLRVEDETGKEVEVGQHGELVARGANVMRGYWNDPEDTALVFRNEMFRTGDIGYQDSDGYFYILDRLKDMIVTGGENVYCGEVEVVIYKHPAVREVAVFGIPDSKWGEIVMACVVRKPGMAMSANDLTTHCRQFLANYKIPRRVEFSDTELPKSGSGKILKRILRERFWAHEQRAVG

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
129 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
130 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.76
Metatranscriptomes 1.24
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.64
Rhizosphere 90.87
Stem 0
Stem Tuber 0
Unclassified 2.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10098897 3300005293 Bacteria 3484
2 Ga0065715_10101581 3300005293 Bacteria 3189
3 Ga0065707_10117245 3300005295 Bacteria 2216
4 Ga0070676_10096173 3300005328 Bacteria 1822
5 Ga0068869_100006080 3300005334 Bacteria 7631
6 Ga0068868_100001050 3300005338 Bacteria 18884
7 Ga0070687_100045521 3300005343 Bacteria 2241
8 Ga0070668_100013427 3300005347 Bacteria 6114
9 Ga0070675_100023347 3300005354 Bacteria 4945
10 Ga0070675_100046300 3300005354 Bacteria 3561
11 Ga0070671_100000183 3300005355 Bacteria 41872
12 Ga0070671_100034688 3300005355 Bacteria 4177
13 Ga0070667_100000846 3300005367 Bacteria 28400
14 Ga0070667_100174042 3300005367 Unclassified 1901
15 Ga0070714_100217915 3300005435 Unclassified 1753
16 Ga0070711_100029175 3300005439 Bacteria 3638
17 Ga0070711_100045173 3300005439 Bacteria 2994
18 Ga0070711_100104093 3300005439 Bacteria 2070
19 Ga0070705_100064791 3300005440 Bacteria 2185
20 Ga0070700_100067138 3300005441 Bacteria 2278
21 Ga0070708_100001303 3300005445 Bacteria 19134
22 Ga0070708_100108563 3300005445 Bacteria 2549
23 Ga0070678_100000778 3300005456 Bacteria 15989
24 Ga0070678_100021844 3300005456 Bacteria 4229
25 Ga0070662_100004006 3300005457 Bacteria 9233
26 Ga0070662_100115679 3300005457 Bacteria 2049
27 Ga0070662_100179619 3300005457 Bacteria 1667
28 Ga0068867_100013996 3300005459 Bacteria 5680
29 Ga0070706_100001614 3300005467 Bacteria 23507
30 Ga0070706_100004570 3300005467 Bacteria 13291
31 Ga0070706_100023101 3300005467 Bacteria 5727
32 Ga0070706_100031469 3300005467 Unclassified 4892
33 Ga0070706_100074499 3300005467 Bacteria 3142
34 Ga0070706_100074813 3300005467 Bacteria 3135
35 Ga0070707_100024265 3300005468 Bacteria 5740
36 Ga0070707_100041173 3300005468 Bacteria 4421
37 Ga0070707_100112879 3300005468 Bacteria 2636
38 Ga0070698_100000780 3300005471 Bacteria 34539
39 Ga0070698_100002575 3300005471 Bacteria 19973
40 Ga0070698_100006019 3300005471 Bacteria 13212
41 Ga0070698_100010257 3300005471 Bacteria 10006
42 Ga0070698_100015213 3300005471 Bacteria 8135
43 Ga0070699_100001177 3300005518 Bacteria 24282
44 Ga0070699_100005384 3300005518 Bacteria 11228
45 Ga0070699_100008368 3300005518 Bacteria 8963
46 Ga0070699_100010769 3300005518 Bacteria 7916
47 Ga0070699_100123660 3300005518 Bacteria 2276
48 Ga0070697_100001632 3300005536 Bacteria 17091
49 Ga0070697_100004580 3300005536 Bacteria 10620
50 Ga0070697_100015056 3300005536 Bacteria 6071
51 Ga0070695_100063092 3300005545 Bacteria 2408
52 Ga0070665_100004883 3300005548 Bacteria 13923
53 Ga0068864_100021174 3300005618 Bacteria 5445
54 Ga0068866_10011320 3300005718 Bacteria 3857
55 Ga0068863_100012587 3300005841 Bacteria 8161
56 Ga0068863_100019062 3300005841 Bacteria 6567
57 Ga0068863_100039498 3300005841 Bacteria 4489
58 Ga0068860_100006773 3300005843 Bacteria 11490
59 Ga0081539_10000003 3300005985 Bacteria 594833
60 Ga0081539_10000243 3300005985 Bacteria 127575
61 Ga0070716_100001253 3300006173 Bacteria 11164
62 Ga0070712_100004058 3300006175 Bacteria 8987
63 Ga0070712_100022117 3300006175 Bacteria 4184
64 Ga0070712_100063224 3300006175 Bacteria 2620
65 Ga0070712_100092920 3300006175 Bacteria 2213
66 Ga0097621_100000246 3300006237 Bacteria 36357
67 Ga0097621_100077199 3300006237 Bacteria 2765
68 Ga0068871_100009373 3300006358 Bacteria 7088
69 Ga0068871_100094441 3300006358 Bacteria 2497
70 Ga0075428_100047959 3300006844 Bacteria 4690
71 Ga0075428_100164549 3300006844 Bacteria 2406
72 Ga0075430_100026020 3300006846 Bacteria 4978
73 Ga0075431_100187282 3300006847 Bacteria 2122
74 Ga0075433_10116089 3300006852 Bacteria 2375
75 Ga0075434_100022826 3300006871 Bacteria 6092
76 Ga0075434_100023892 3300006871 Bacteria 5966
77 Ga0075434_100024611 3300006871 Bacteria 5887
78 Ga0075434_100034234 3300006871 Bacteria 5016
79 Ga0075434_100070938 3300006871 Bacteria 3475
80 Ga0075429_100014396 3300006880 Bacteria 6854
81 Ga0075429_100047680 3300006880 Bacteria 3727
82 Ga0075436_100124436 3300006914 Bacteria 1806
83 Ga0075435_100147563 3300007076 Bacteria 1976
84 Ga0099795_10008967 3300007788 Bacteria 2882
85 Ga0099795_10021112 3300007788 Unclassified 2131
86 Ga0099795_10021655 3300007788 Bacteria 2111
87 Ga0111539_10037962 3300009094 Bacteria 5810
88 Ga0111539_10165772 3300009094 Bacteria 2583
89 Ga0105245_10002126 3300009098 Bacteria 17944
90 Ga0105245_10033588 3300009098 Bacteria 4548
91 Ga0114129_10009150 3300009147 Bacteria 14120
92 Ga0114129_10077136 3300009147 Bacteria 4636
93 Ga0114129_10290543 3300009147 Bacteria 2182
94 Ga0114129_10442534 3300009147 Bacteria 1706
95 Ga0105243_10056926 3300009148 Bacteria 3112
96 Ga0105242_10036731 3300009176 Bacteria 3931
97 Ga0105242_10151148 3300009176 Unclassified 2024
98 Ga0105248_10001112 3300009177 Bacteria 29868
99 Ga0105249_10053134 3300009553 Bacteria 3703
100 Ga0157371_10031593 3300013102 Bacteria 3815
101 Ga0157374_10019659 3300013296 Bacteria 5980
102 Ga0157374_10030251 3300013296 Bacteria 4913
103 Ga0157374_10164174 3300013296 Bacteria 2164
104 Ga0157378_10002506 3300013297 Bacteria 16345
105 Ga0157378_10180578 3300013297 Bacteria 1985
106 Ga0163162_10005060 3300013306 Bacteria 12699
107 Ga0163162_10018577 3300013306 Bacteria 6812
108 Ga0163162_10019906 3300013306 Bacteria 6591
109 Ga0163162_10083291 3300013306 Bacteria 3272
110 Ga0163162_10294181 3300013306 Bacteria 1755
111 Ga0157375_10054286 3300013308 Bacteria 3946
112 Ga0157375_10074886 3300013308 Bacteria 3408
113 Ga0157380_10032666 3300014326 Bacteria 4006
114 Ga0157379_10011819 3300014968 Bacteria 7624
115 Ga0157376_10040497 3300014969 Bacteria 3809
116 Ga0157376_10047589 3300014969 Bacteria 3541
117 Ga0213872_10005247 3300021361 Bacteria 6702
118 Ga0213876_10021929 3300021384 Bacteria 3379
119 Ga0207697_10015613 3300025315 Bacteria 3136
120 Ga0207692_10009100 3300025898 Bacteria 4134
121 Ga0207680_10009862 3300025903 Bacteria 4755
122 Ga0207699_10037902 3300025906 Bacteria 2759
123 Ga0207645_10000285 3300025907 Bacteria 42153
124 Ga0207645_10104983 3300025907 Bacteria 1825
125 Ga0207684_10001587 3300025910 Bacteria 24190
126 Ga0207684_10002800 3300025910 Bacteria 17338
127 Ga0207684_10007789 3300025910 Bacteria 9582
128 Ga0207684_10009934 3300025910 Bacteria 8389
129 Ga0207684_10039599 3300025910 Bacteria 3997
130 Ga0207684_10117415 3300025910 Bacteria 2280
131 Ga0207693_10001687 3300025915 Bacteria 19444
132 Ga0207693_10005996 3300025915 Bacteria 10077
133 Ga0207693_10024720 3300025915 Bacteria 4764
134 Ga0207693_10051557 3300025915 Bacteria 3229
135 Ga0207693_10064191 3300025915 Bacteria 2876
136 Ga0207693_10079764 3300025915 Bacteria 2562
137 Ga0207693_10142584 3300025915 Bacteria 1884
138 Ga0207663_10035515 3300025916 Bacteria 2991
139 Ga0207663_10096378 3300025916 Bacteria 1976
140 Ga0207657_10039169 3300025919 Bacteria 4214
141 Ga0207646_10004464 3300025922 Bacteria 15169
142 Ga0207646_10005399 3300025922 Bacteria 13447
143 Ga0207646_10022539 3300025922 Bacteria 5800
144 Ga0207646_10086769 3300025922 Bacteria 2800
145 Ga0207681_10005144 3300025923 Bacteria 8037
146 Ga0207681_10101218 3300025923 Bacteria 2078
147 Ga0207659_10038861 3300025926 Bacteria 3313
148 Ga0207687_10000217 3300025927 Bacteria 39106
149 Ga0207700_10021089 3300025928 Bacteria 4441
150 Ga0207644_10000120 3300025931 Bacteria 57828
151 Ga0207644_10036381 3300025931 Bacteria 3455
152 Ga0207706_10000206 3300025933 Bacteria 65055
153 Ga0207686_10035987 3300025934 Bacteria 2976
154 Ga0207709_10032189 3300025935 Bacteria 3069
155 Ga0207704_10109976 3300025938 Bacteria 1860
156 Ga0207665_10000101 3300025939 Bacteria 55649
157 Ga0207665_10009169 3300025939 Bacteria 6499
158 Ga0207665_10051171 3300025939 Bacteria 2779
159 Ga0207665_10066435 3300025939 Bacteria 2454
160 Ga0207691_10054471 3300025940 Bacteria 3648
161 Ga0207691_10074668 3300025940 Bacteria 3057
162 Ga0207689_10006169 3300025942 Bacteria 10607
163 Ga0207640_10032830 3300025981 Bacteria 3223
164 Ga0207658_10067664 3300025986 Bacteria 2691
165 Ga0207703_10082434 3300026035 Bacteria 2684
166 Ga0207708_10075819 3300026075 Bacteria 2579
167 Ga0207641_10012773 3300026088 Bacteria 6884
168 Ga0207641_10020894 3300026088 Bacteria 5381
169 Ga0207641_10063118 3300026088 Bacteria 3164
170 Ga0207641_10097562 3300026088 Bacteria 2583
171 Ga0207648_10017104 3300026089 Bacteria 6608
172 Ga0207648_10035207 3300026089 Bacteria 4411
173 Ga0207648_10096208 3300026089 Unclassified 2591
174 Ga0207676_10013076 3300026095 Bacteria 5958
175 Ga0207683_10001311 3300026121 Bacteria 22474
176 Ga0265354_1001729 3300028016 Bacteria 3007
177 Ga0268266_10014199 3300028379 Bacteria 6851
178 Ga0268265_10016360 3300028380 Bacteria 5094
179 Ga0265337_1001079 3300028556 Bacteria 14070
180 Ga0265338_10024512 3300028800 Bacteria 6160
181 Ga0265338_10036157 3300028800 Bacteria 4733
182 Ga0265762_1003878 3300030760 Bacteria 2679
183 Ga0265760_10000108 3300031090 Bacteria 21002
184 Ga0265760_10004325 3300031090 Unclassified 4076
185 Ga0265320_10001785 3300031240 Bacteria 15235
186 Ga0307513_10160703 3300031456 Bacteria 2140
187 Ga0307516_10001098 3300031730 Bacteria 37714
188 Ga0373931_0008345 3300035691 Bacteria 4907
189 Ga0373947_0019973 3300035725 Bacteria 3866
190 Ga0395898_0061585 3300037466 Bacteria 3645
191 Ga0436365_0130085 3300039437 Bacteria 1951
192 Ga0436365_0265039 3300039437 Bacteria 3281
193 Ga0436365_1810506 3300039437 Unclassified 1523
194 Ga0436360_0147044 3300039438 Bacteria 2744
195 Ga0436361_0218389 3300039447 Bacteria 9971
196 Ga0436361_0816824 3300039447 Bacteria 2745
197 Ga0436361_0855566 3300039447 Bacteria 9370
198 Ga0495638_0103919 3300046460 Bacteria 1695
199 Ga0495587_0100411 3300046536 Bacteria 1668
200 Ga0495672_0020450 3300047320 Bacteria 4338
201 Ga0496100_0069584 3300048903 Bacteria 2344
202 Ga0496101_0049043 3300048904 Bacteria 3036
203 Ga0496102_0023160 3300048905 Bacteria 5512
204 Ga0496103_0037934 3300048906 Bacteria 2955
205 Ga0496104_0098067 3300048907 Bacteria 2805
206 Ga0496104_0130420 3300048907 Bacteria 2415
207 Ga0496105_0005875 3300048908 Bacteria 9358
208 Ga0496106_0030278 3300048909 Bacteria 4036
209 Ga0496109_0006430 3300048912 Bacteria 9898
210 Ga0496111_0007838 3300048914 Bacteria 7033
211 Ga0496112_0015885 3300048915 Bacteria 7036
212 Ga0496112_0190831 3300048915 Bacteria 2011
213 Ga0496112_0269511 3300048915 Bacteria 1651
214 Ga0496113_0010969 3300048916 Bacteria 6020
215 Ga0496115_0001576 3300048918 Bacteria 16387
216 Ga0496115_0109315 3300048918 Bacteria 2270
217 nmdc:mga05p37_111029_c1 3300050507 Bacteria 3372
218 nmdc:mga05p37_123377_c1 3300050507 Bacteria 3182
219 nmdc:mga05p37_204404_c1 3300050507 Bacteria 2390
220 nmdc:mga05p37_224202_c1 3300050507 Bacteria 2267
221 nmdc:mga05p37_468_c1 3300050507 Bacteria 44036
222 nmdc:mga05p37_521504_c1 3300050507 Bacteria 1359
223 nmdc:mga05p37_81875_c1 3300050507 Bacteria 3977
224 nmdc:mga09592_70600_c1 3300050508 Bacteria 2964
225 nmdc:mga0qj67_4891_c1 3300050509 Bacteria 9742
226 nmdc:mga06r32_62198_c1 3300050510 Bacteria 3596
227 nmdc:mga08y16_13361_c1 3300050511 Bacteria 8637
228 nmdc:mga08y16_20693_c1 3300050511 Bacteria 6944
229 nmdc:mga08y16_44060_c1 3300050511 Bacteria 4674
230 nmdc:mga0n895_106760_c1 3300050512 Bacteria 2813
231 nmdc:mga0n895_114250_c1 3300050512 Bacteria 2718
232 nmdc:mga0n895_278148_c1 3300050512 Bacteria 1697
233 nmdc:mga0n895_38494_c1 3300050512 Bacteria 4634
234 nmdc:mga0n895_620_c1 3300050512 Bacteria 24711
235 nmdc:mga0rr50_15378_c1 3300050513 Bacteria 5049
236 nmdc:mga08x19_146486_c1 3300050514 Bacteria 1597
237 nmdc:mga0a205_105481_c1 3300050515 Unclassified 2717
238 nmdc:mga0a205_135407_c1 3300050515 Bacteria 2364
239 nmdc:mga0a205_167440_c1 3300050515 Bacteria 2093
240 nmdc:mga0a205_40221_c1 3300050515 Bacteria 4501
241 nmdc:mga0a205_560_c1 3300050515 Bacteria 29509

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0855566 Ga0436361_0855566_4828_6117 429
2 3300050507 nmdc:mga05p37_521504_c1 nmdc:mga05p37_521504_c1_21_1310 429
3 3300050513 nmdc:mga0rr50_15378_c1 nmdc:mga0rr50_15378_c1_3404_4717 437
4 3300007788 Ga0099795_10008967 Ga0099795_100089674 441
5 3300039437 Ga0436365_1810506 Ga0436365_1810506_15_1346 443
6 3300006880 Ga0075429_100014396 Ga0075429_1000143962 456
7 3300028556 Ga0265337_1001079 Ga0265337_10010793 459
8 3300031240 Ga0265320_10001785 Ga0265320_1000178513 459
9 3300013306 Ga0163162_10018577 Ga0163162_100185773 470
10 3300050512 nmdc:mga0n895_38494_c1 nmdc:mga0n895_38494_c1_1983_3395 470
11 3300048905 Ga0496102_0023160 Ga0496102_0023160_3973_5388 471
12 3300046460 Ga0495638_0103919 Ga0495638_0103919_256_1674 472
13 3300048907 Ga0496104_0130420 Ga0496104_0130420_206_1624 472
14 3300009098 Ga0105245_10002126 Ga0105245_1000212610 479
15 3300050510 nmdc:mga06r32_62198_c1 nmdc:mga06r32_62198_c1_1123_2628 484
16 3300005518 Ga0070699_100005384 Ga0070699_1000053844 485
17 3300031090 Ga0265760_10004325 Ga0265760_100043253 489
18 3300009148 Ga0105243_10056926 Ga0105243_100569263 495
19 3300025981 Ga0207640_10032830 Ga0207640_100328302 495
20 3300026089 Ga0207648_10017104 Ga0207648_100171043 495
21 3300039447 Ga0436361_0816824 Ga0436361_0816824_1225_2712 495
22 3300005293 Ga0065715_10098897 Ga0065715_100988972 496
23 3300005293 Ga0065715_10101581 Ga0065715_101015812 496
24 3300005295 Ga0065707_10117245 Ga0065707_101172452 496
25 3300005328 Ga0070676_10096173 Ga0070676_100961731 496
26 3300005334 Ga0068869_100006080 Ga0068869_1000060805 496
27 3300005338 Ga0068868_100001050 Ga0068868_10000105010 496
28 3300005343 Ga0070687_100045521 Ga0070687_1000455212 496
29 3300005347 Ga0070668_100013427 Ga0070668_1000134273 496
30 3300005354 Ga0070675_100023347 Ga0070675_1000233473 496
31 3300005354 Ga0070675_100046300 Ga0070675_1000463001 496
32 3300005355 Ga0070671_100000183 Ga0070671_10000018323 496
33 3300005355 Ga0070671_100034688 Ga0070671_1000346883 496
34 3300005367 Ga0070667_100000846 Ga0070667_1000008468 496
35 3300005367 Ga0070667_100174042 Ga0070667_1001740422 496
36 3300005435 Ga0070714_100217915 Ga0070714_1002179152 496
37 3300005439 Ga0070711_100029175 Ga0070711_1000291751 496
38 3300005439 Ga0070711_100045173 Ga0070711_1000451731 496
39 3300005439 Ga0070711_100104093 Ga0070711_1001040932 496
40 3300005440 Ga0070705_100064791 Ga0070705_1000647911 496
41 3300005441 Ga0070700_100067138 Ga0070700_1000671381 496
42 3300005445 Ga0070708_100001303 Ga0070708_1000013036 496
43 3300005445 Ga0070708_100108563 Ga0070708_1001085632 496
44 3300005456 Ga0070678_100000778 Ga0070678_1000007784 496
45 3300005456 Ga0070678_100021844 Ga0070678_1000218443 496
46 3300005457 Ga0070662_100004006 Ga0070662_1000040064 496
47 3300005457 Ga0070662_100115679 Ga0070662_1001156792 496
48 3300005457 Ga0070662_100179619 Ga0070662_1001796191 496
49 3300005459 Ga0068867_100013996 Ga0068867_1000139963 496
50 3300005467 Ga0070706_100001614 Ga0070706_10000161417 496
51 3300005467 Ga0070706_100004570 Ga0070706_10000457011 496
52 3300005467 Ga0070706_100023101 Ga0070706_1000231012 496
53 3300005467 Ga0070706_100031469 Ga0070706_1000314693 496
54 3300005467 Ga0070706_100074499 Ga0070706_1000744992 496
55 3300005467 Ga0070706_100074813 Ga0070706_1000748133 496
56 3300005468 Ga0070707_100024265 Ga0070707_1000242653 496
57 3300005468 Ga0070707_100041173 Ga0070707_1000411731 496
58 3300005468 Ga0070707_100112879 Ga0070707_1001128792 496
59 3300005471 Ga0070698_100000780 Ga0070698_1000007806 496
60 3300005471 Ga0070698_100002575 Ga0070698_1000025758 496
61 3300005471 Ga0070698_100006019 Ga0070698_1000060192 496
62 3300005471 Ga0070698_100010257 Ga0070698_1000102574 496
63 3300005471 Ga0070698_100015213 Ga0070698_1000152134 496
64 3300005518 Ga0070699_100001177 Ga0070699_10000117721 496
65 3300005518 Ga0070699_100008368 Ga0070699_1000083687 496
66 3300005518 Ga0070699_100010769 Ga0070699_1000107694 496
67 3300005518 Ga0070699_100123660 Ga0070699_1001236601 496
68 3300005536 Ga0070697_100001632 Ga0070697_1000016326 496
69 3300005536 Ga0070697_100004580 Ga0070697_1000045805 496
70 3300005536 Ga0070697_100015056 Ga0070697_1000150563 496
71 3300005545 Ga0070695_100063092 Ga0070695_1000630921 496
72 3300005548 Ga0070665_100004883 Ga0070665_1000048837 496
73 3300005618 Ga0068864_100021174 Ga0068864_1000211743 496
74 3300005718 Ga0068866_10011320 Ga0068866_100113203 496
75 3300005841 Ga0068863_100012587 Ga0068863_1000125872 496
76 3300005841 Ga0068863_100019062 Ga0068863_1000190626 496
77 3300005841 Ga0068863_100039498 Ga0068863_1000394985 496
78 3300005843 Ga0068860_100006773 Ga0068860_1000067738 496
79 3300005985 Ga0081539_10000003 Ga0081539_10000003453 496
80 3300005985 Ga0081539_10000243 Ga0081539_1000024365 496
81 3300006173 Ga0070716_100001253 Ga0070716_1000012535 496
82 3300006175 Ga0070712_100004058 Ga0070712_1000040585 496
83 3300006175 Ga0070712_100022117 Ga0070712_1000221172 496
84 3300006175 Ga0070712_100063224 Ga0070712_1000632242 496
85 3300006175 Ga0070712_100092920 Ga0070712_1000929202 496
86 3300006237 Ga0097621_100000246 Ga0097621_10000024636 496
87 3300006237 Ga0097621_100077199 Ga0097621_1000771992 496
88 3300006358 Ga0068871_100009373 Ga0068871_1000093734 496
89 3300006358 Ga0068871_100094441 Ga0068871_1000944412 496
90 3300006844 Ga0075428_100047959 Ga0075428_1000479594 496
91 3300006844 Ga0075428_100164549 Ga0075428_1001645492 496
92 3300006846 Ga0075430_100026020 Ga0075430_1000260202 496
93 3300006847 Ga0075431_100187282 Ga0075431_1001872822 496
94 3300006852 Ga0075433_10116089 Ga0075433_101160893 496
95 3300006871 Ga0075434_100022826 Ga0075434_1000228264 496
96 3300006871 Ga0075434_100023892 Ga0075434_1000238925 496
97 3300006871 Ga0075434_100024611 Ga0075434_1000246113 496
98 3300006871 Ga0075434_100034234 Ga0075434_1000342342 496
99 3300006871 Ga0075434_100070938 Ga0075434_1000709383 496
100 3300006880 Ga0075429_100047680 Ga0075429_1000476802 496
101 3300006914 Ga0075436_100124436 Ga0075436_1001244361 496
102 3300007076 Ga0075435_100147563 Ga0075435_1001475632 496
103 3300007788 Ga0099795_10021112 Ga0099795_100211121 496
104 3300007788 Ga0099795_10021655 Ga0099795_100216552 496
105 3300009094 Ga0111539_10037962 Ga0111539_100379622 496
106 3300009094 Ga0111539_10165772 Ga0111539_101657722 496
107 3300009098 Ga0105245_10033588 Ga0105245_100335883 496
108 3300009147 Ga0114129_10009150 Ga0114129_100091506 496
109 3300009147 Ga0114129_10077136 Ga0114129_100771366 496
110 3300009147 Ga0114129_10290543 Ga0114129_102905432 496
111 3300009147 Ga0114129_10442534 Ga0114129_104425341 496
112 3300009176 Ga0105242_10036731 Ga0105242_100367313 496
113 3300009176 Ga0105242_10151148 Ga0105242_101511482 496
114 3300009177 Ga0105248_10001112 Ga0105248_1000111213 496
115 3300009553 Ga0105249_10053134 Ga0105249_100531342 496
116 3300013102 Ga0157371_10031593 Ga0157371_100315934 496
117 3300013296 Ga0157374_10019659 Ga0157374_100196596 496
118 3300013296 Ga0157374_10030251 Ga0157374_100302512 496
119 3300013296 Ga0157374_10164174 Ga0157374_101641742 496
120 3300013297 Ga0157378_10002506 Ga0157378_1000250614 496
121 3300013297 Ga0157378_10180578 Ga0157378_101805781 496
122 3300013306 Ga0163162_10005060 Ga0163162_1000506011 496
123 3300013306 Ga0163162_10019906 Ga0163162_100199064 496
124 3300013306 Ga0163162_10083291 Ga0163162_100832913 496
125 3300013306 Ga0163162_10294181 Ga0163162_102941811 496
126 3300013308 Ga0157375_10054286 Ga0157375_100542863 496
127 3300013308 Ga0157375_10074886 Ga0157375_100748864 496
128 3300014326 Ga0157380_10032666 Ga0157380_100326663 496
129 3300014968 Ga0157379_10011819 Ga0157379_100118192 496
130 3300014969 Ga0157376_10040497 Ga0157376_100404973 496
131 3300014969 Ga0157376_10047589 Ga0157376_100475892 496
132 3300021361 Ga0213872_10005247 Ga0213872_100052471 496
133 3300021384 Ga0213876_10021929 Ga0213876_100219293 496
134 3300025315 Ga0207697_10015613 Ga0207697_100156132 496
135 3300025898 Ga0207692_10009100 Ga0207692_100091004 496
136 3300025903 Ga0207680_10009862 Ga0207680_100098623 496
137 3300025906 Ga0207699_10037902 Ga0207699_100379022 496
138 3300025907 Ga0207645_10000285 Ga0207645_1000028526 496
139 3300025907 Ga0207645_10104983 Ga0207645_101049832 496
140 3300025910 Ga0207684_10001587 Ga0207684_100015878 496
141 3300025910 Ga0207684_10002800 Ga0207684_1000280018 496
142 3300025910 Ga0207684_10007789 Ga0207684_100077893 496
143 3300025910 Ga0207684_10009934 Ga0207684_100099348 496
144 3300025910 Ga0207684_10039599 Ga0207684_100395995 496
145 3300025910 Ga0207684_10117415 Ga0207684_101174151 496
146 3300025915 Ga0207693_10001687 Ga0207693_1000168715 496
147 3300025915 Ga0207693_10005996 Ga0207693_100059965 496
148 3300025915 Ga0207693_10024720 Ga0207693_100247203 496
149 3300025915 Ga0207693_10051557 Ga0207693_100515572 496
150 3300025915 Ga0207693_10064191 Ga0207693_100641912 496
151 3300025915 Ga0207693_10079764 Ga0207693_100797642 496
152 3300025915 Ga0207693_10142584 Ga0207693_101425841 496
153 3300025916 Ga0207663_10035515 Ga0207663_100355152 496
154 3300025916 Ga0207663_10096378 Ga0207663_100963782 496
155 3300025919 Ga0207657_10039169 Ga0207657_100391693 496
156 3300025922 Ga0207646_10004464 Ga0207646_100044648 496
157 3300025922 Ga0207646_10005399 Ga0207646_100053994 496
158 3300025922 Ga0207646_10022539 Ga0207646_100225393 496
159 3300025922 Ga0207646_10086769 Ga0207646_100867692 496
160 3300025923 Ga0207681_10005144 Ga0207681_100051444 496
161 3300025923 Ga0207681_10101218 Ga0207681_101012181 496
162 3300025926 Ga0207659_10038861 Ga0207659_100388613 496
163 3300025927 Ga0207687_10000217 Ga0207687_100002178 496
164 3300025928 Ga0207700_10021089 Ga0207700_100210892 496
165 3300025931 Ga0207644_10000120 Ga0207644_1000012051 496
166 3300025931 Ga0207644_10036381 Ga0207644_100363813 496
167 3300025933 Ga0207706_10000206 Ga0207706_1000020648 496
168 3300025934 Ga0207686_10035987 Ga0207686_100359872 496
169 3300025935 Ga0207709_10032189 Ga0207709_100321893 496
170 3300025938 Ga0207704_10109976 Ga0207704_101099761 496
171 3300025939 Ga0207665_10000101 Ga0207665_1000010142 496
172 3300025939 Ga0207665_10009169 Ga0207665_100091692 496
173 3300025939 Ga0207665_10051171 Ga0207665_100511713 496
174 3300025939 Ga0207665_10066435 Ga0207665_100664351 496
175 3300025940 Ga0207691_10054471 Ga0207691_100544713 496
176 3300025940 Ga0207691_10074668 Ga0207691_100746682 496
177 3300025942 Ga0207689_10006169 Ga0207689_100061694 496
178 3300025986 Ga0207658_10067664 Ga0207658_100676642 496
179 3300026035 Ga0207703_10082434 Ga0207703_100824343 496
180 3300026075 Ga0207708_10075819 Ga0207708_100758192 496
181 3300026088 Ga0207641_10012773 Ga0207641_100127733 496
182 3300026088 Ga0207641_10020894 Ga0207641_100208945 496
183 3300026088 Ga0207641_10063118 Ga0207641_100631181 496
184 3300026088 Ga0207641_10097562 Ga0207641_100975622 496
185 3300026089 Ga0207648_10035207 Ga0207648_100352073 496
186 3300026089 Ga0207648_10096208 Ga0207648_100962082 496
187 3300026095 Ga0207676_10013076 Ga0207676_100130763 496
188 3300026121 Ga0207683_10001311 Ga0207683_1000131110 496
189 3300028016 Ga0265354_1001729 Ga0265354_10017291 496
190 3300028379 Ga0268266_10014199 Ga0268266_100141993 496
191 3300028380 Ga0268265_10016360 Ga0268265_100163603 496
192 3300028800 Ga0265338_10024512 Ga0265338_100245126 496
193 3300028800 Ga0265338_10036157 Ga0265338_100361573 496
194 3300030760 Ga0265762_1003878 Ga0265762_10038782 496
195 3300031090 Ga0265760_10000108 Ga0265760_1000010819 496
196 3300031456 Ga0307513_10160703 Ga0307513_101607032 496
197 3300031730 Ga0307516_10001098 Ga0307516_1000109827 496
198 3300035691 Ga0373931_0008345 Ga0373931_0008345_2744_4234 496
199 3300035725 Ga0373947_0019973 Ga0373947_0019973_2092_3585 496
200 3300037466 Ga0395898_0061585 Ga0395898_0061585_711_2201 496
201 3300039437 Ga0436365_0130085 Ga0436365_0130085_166_1656 496
202 3300039437 Ga0436365_0265039 Ga0436365_0265039_1711_3201 496
203 3300039438 Ga0436360_0147044 Ga0436360_0147044_563_2053 496
204 3300039447 Ga0436361_0218389 Ga0436361_0218389_5322_6812 496
205 3300046536 Ga0495587_0100411 Ga0495587_0100411_98_1588 496
206 3300047320 Ga0495672_0020450 Ga0495672_0020450_2811_4301 496
207 3300048903 Ga0496100_0069584 Ga0496100_0069584_455_1945 496
208 3300048904 Ga0496101_0049043 Ga0496101_0049043_372_1862 496
209 3300048906 Ga0496103_0037934 Ga0496103_0037934_1141_2631 496
210 3300048907 Ga0496104_0098067 Ga0496104_0098067_622_2112 496
211 3300048908 Ga0496105_0005875 Ga0496105_0005875_1298_2788 496
212 3300048909 Ga0496106_0030278 Ga0496106_0030278_1155_2645 496
213 3300048912 Ga0496109_0006430 Ga0496109_0006430_3796_5286 496
214 3300048914 Ga0496111_0007838 Ga0496111_0007838_333_1823 496
215 3300048915 Ga0496112_0015885 Ga0496112_0015885_1063_2553 496
216 3300048915 Ga0496112_0190831 Ga0496112_0190831_134_1627 496
217 3300048915 Ga0496112_0269511 Ga0496112_0269511_82_1572 496
218 3300048916 Ga0496113_0010969 Ga0496113_0010969_1814_3304 496
219 3300048918 Ga0496115_0001576 Ga0496115_0001576_14171_15661 496
220 3300048918 Ga0496115_0109315 Ga0496115_0109315_683_2173 496
221 3300050507 nmdc:mga05p37_111029_c1 nmdc:mga05p37_111029_c1_900_2390 496
222 3300050507 nmdc:mga05p37_123377_c1 nmdc:mga05p37_123377_c1_623_2113 496
223 3300050507 nmdc:mga05p37_204404_c1 nmdc:mga05p37_204404_c1_81_1571 496
224 3300050507 nmdc:mga05p37_224202_c1 nmdc:mga05p37_224202_c1_722_2227 496
225 3300050507 nmdc:mga05p37_468_c1 nmdc:mga05p37_468_c1_39109_40599 496
226 3300050507 nmdc:mga05p37_81875_c1 nmdc:mga05p37_81875_c1_91_1581 496
227 3300050508 nmdc:mga09592_70600_c1 nmdc:mga09592_70600_c1_665_2155 496
228 3300050509 nmdc:mga0qj67_4891_c1 nmdc:mga0qj67_4891_c1_2617_4107 496
229 3300050511 nmdc:mga08y16_13361_c1 nmdc:mga08y16_13361_c1_4249_5739 496
230 3300050511 nmdc:mga08y16_20693_c1 nmdc:mga08y16_20693_c1_3860_5350 496
231 3300050511 nmdc:mga08y16_44060_c1 nmdc:mga08y16_44060_c1_976_2466 496
232 3300050512 nmdc:mga0n895_106760_c1 nmdc:mga0n895_106760_c1_773_2263 496
233 3300050512 nmdc:mga0n895_114250_c1 nmdc:mga0n895_114250_c1_960_2450 496
234 3300050512 nmdc:mga0n895_278148_c1 nmdc:mga0n895_278148_c1_44_1534 496
235 3300050512 nmdc:mga0n895_620_c1 nmdc:mga0n895_620_c1_20236_21726 496
236 3300050514 nmdc:mga08x19_146486_c1 nmdc:mga08x19_146486_c1_71_1561 496
237 3300050515 nmdc:mga0a205_105481_c1 nmdc:mga0a205_105481_c1_521_2014 496
238 3300050515 nmdc:mga0a205_135407_c1 nmdc:mga0a205_135407_c1_272_1762 496
239 3300050515 nmdc:mga0a205_167440_c1 nmdc:mga0a205_167440_c1_367_1857 496
240 3300050515 nmdc:mga0a205_40221_c1 nmdc:mga0a205_40221_c1_58_1548 496
241 3300050515 nmdc:mga0a205_560_c1 nmdc:mga0a205_560_c1_11303_12793 496

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

419

495

0.95

PF00501

AMP-binding

AMP-binding enzyme

26

369

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.9139 7 485
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.9138 2 386
5gtd-assembly1.cif.gz_B o-succinylbenzoate coa synthetase (mene) from bacillus subtilis in complex with the acyl-adenylate intermediate osb-amp 0.912 7 385
6sq8-assembly5.cif.gz_E structure of amide bond synthetase mcba from marinactinospora thermotolerans 0.9094 6 486
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.9094 2 384
ID Description Score Start End Superfamily
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.98 389 483 3.30.300.30
af_P69451_456_557_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9667 388 487 3.30.300.30
af_I1LI90_433_534_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9635 387 489 3.30.300.30
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9629 388 486 3.30.300.30
af_O05295_375_473_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9607 387 485 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A2E4XRB8-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.972 389 487 GO:0006631
GO:0031956
AF-A0A2D9F669-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9636 389 486 GO:0006631
GO:0031956
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9615 385 490 GO:0016405
AF-A0A522AV37-F1-model_v4 AMP-dependent synthetase 0.96 394 486 GO:0016874
AF-A0A2A2L309-F1-model_v4 Long-chain-fatty-acid--CoA ligase 0.9551 7 108 GO:0004467
GO:0005324
GO:0005789
GO:0005886
GO:0044539

Feature Viewer

pLDDT pTM Quality
89.8 0.89 High
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Predicted Structure (AlphaFold2)

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