F353517

General Info

Members Datasets Scaffolds Average Seq Length
241 169 225 505

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100045021|Ga0070659_1000450212
Length 549
Sequence MWCPRRHYVNARSDFPRPDPFASAPHRSDTPALVDVAIIGTGFAGLGMAIQLKQHGIDNFLVFEKADSVGGTWRDNHYPGCACDVQSHLYSFSFAPNPDWSRMYSPQPEIRAYLERCTEAFGVRPHVRFHHELVRAAFNEAAGAWDLEMADGRRYRARVLISGMGGLSRPSWPNIPGIETFRGKAFHSQLWEHDYDLRGKRVAVIGTGASAIQFVPKIAPKAGRVDLYQRTPPWILPKPDRKVSRAEHWLFRHLPFTQKLMRTSIYWMRESRVLGFVVHPKLMKAVERMARGHIKRRIADPVLREKVTPDYTIGCKRILISNDYYPALTRENVDVITTGIARVEPNAIVTTDGTRREVDCLIFGTGFHATDPFPRGVLLGSRGVDIVDAWDKHGAEAYLGTTVSGFPNFFMVVGPNTGLGHSSMVFMIESQVAYIVDALKSMRAHNVAAIDVRPDVQRRFNDGIQKRLSNAIWSAGGCVSWYLDPKTGKNTTLWPGFTWQFRRATAHFRLADYRTRPMPVPKGMPSRVPARTVPAAAQNTANEEVLDRA

Samples

Sample ID Description Type Environment
1 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
4 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
5 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
6 2643221638 Duganella sp. Root336D2 Isolate Unclassified
7 2643221692 Nocardia sp. Root136 Isolate Unclassified
8 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
9 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
10 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
11 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
12 2885266251 Ralstonia sp. SET104 Isolate Nodule
13 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
14 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
15 2928058823 Ralstonia sp. 1138 Isolate Unclassified
16 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
19 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
20 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
21 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
22 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
23 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
24 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
25 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
26 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
27 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
28 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
29 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
30 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
31 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
32 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
33 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
34 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
35 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
36 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
37 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
41 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
42 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
43 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
44 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
71 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
75 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
83 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
84 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
87 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
88 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
126 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
127 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
128 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044671 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA1E Metagenome Unclassified
131 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
132 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
133 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
134 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
135 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
138 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
142 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
145 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
146 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
147 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
150 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
151 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
169 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.12
Metatranscriptomes 1.24
Isolates 6.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.41
Nodule 0.83
Rhizoplane 1.66
Rhizosphere 66.39
Stem 0
Stem Tuber 0
Unclassified 8.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000121 3300001915 Bacteria 20999
2 JGI24740J21852_10001046 3300001979 Bacteria 12429
3 JGI24740J21852_10005653 3300001979 Bacteria 5265
4 JGI24740J21852_10028226 3300001979 Bacteria 1856
5 JGI24737J22298_10015675 3300001990 Bacteria 2452
6 JGI25156J39149_1008174 3300002705 Bacteria 2662
7 JGI25154J39366_1001404 3300002738 Bacteria 8665
8 JGI25158J39367_1000370 3300002739 Bacteria 9624
9 JGI25158J39367_1000695 3300002739 Bacteria 6522
10 JGI25159J45721_1001515 3300002987 Bacteria 9524
11 JGI25161J50226_1000202 3300003374 Bacteria 38806
12 Ga0055539_1000194 3300003752 Bacteria 50008
13 Ga0055533_1003251 3300003756 Bacteria 3335
14 Ga0055532_1000139 3300003758 Bacteria 71879
15 Ga0055525_1000454 3300003759 Bacteria 23395
16 Ga0055535_1000161 3300003761 Bacteria 71879
17 Ga0055542_1001294 3300003762 Bacteria 13351
18 Ga0055529_1000292 3300003763 Bacteria 58403
19 Ga0055526_1001454 3300003771 Bacteria 16824
20 Ga0055526_1001917 3300003771 Bacteria 14393
21 Ga0055537_1004687 3300003773 Bacteria 3853
22 Ga0055524_1000965 3300003775 Bacteria 18114
23 Ga0055524_1001545 3300003775 Bacteria 13022
24 Ga0055530_10000617 3300003791 Bacteria 30889
25 Ga0055530_10009130 3300003791 Bacteria 3855
26 Ga0055530_10009136 3300003791 Bacteria 3852
27 Ga0055531_10006661 3300003794 Bacteria 6481
28 Ga0055543_1000260 3300004625 Bacteria 39791
29 Ga0065165_1002919 3300005262 Bacteria 13068
30 Ga0070658_10024820 3300005327 Bacteria 4808
31 Ga0070658_10061298 3300005327 Bacteria 3064
32 Ga0070660_100000110 3300005339 Bacteria 50810
33 Ga0070661_100000379 3300005344 Bacteria 34952
34 Ga0070668_100102594 3300005347 Bacteria 2268
35 Ga0070659_100007800 3300005366 Bacteria 7787
36 Ga0070659_100045021 3300005366 Bacteria 3456
37 Ga0070663_100000026 3300005455 Bacteria 101463
38 Ga0070685_10000798 3300005466 Bacteria 17072
39 Ga0070665_100014982 3300005548 Bacteria 7783
40 Ga0068855_100000976 3300005563 Bacteria 35611
41 Ga0068855_100106614 3300005563 Bacteria 3220
42 Ga0070664_100000014 3300005564 Bacteria 130113
43 Ga0068857_100003853 3300005577 Bacteria 12624
44 Ga0068854_100000029 3300005578 Bacteria 112855
45 Ga0068856_100000090 3300005614 Bacteria 85112
46 Ga0068852_100013382 3300005616 Bacteria 6280
47 Ga0068859_100064038 3300005617 Bacteria 3709
48 Ga0068864_100092624 3300005618 Bacteria 2668
49 Ga0075428_100003659 3300006844 Bacteria 16851
50 Ga0075430_100014119 3300006846 Bacteria 6811
51 Ga0075430_100021119 3300006846 Bacteria 5536
52 Ga0075431_100019212 3300006847 Bacteria 6965
53 Ga0075429_100014582 3300006880 Bacteria 6811
54 Ga0097620_100064037 3300006931 Bacteria 3709
55 Ga0105240_10003095 3300009093 Bacteria 26158
56 Ga0105240_10015343 3300009093 Bacteria 10420
57 Ga0105240_10147177 3300009093 Bacteria 2809
58 Ga0111539_10004299 3300009094 Bacteria 18631
59 Ga0114129_10003894 3300009147 Bacteria 21058
60 Ga0105237_10009504 3300009545 Bacteria 10410
61 Ga0105239_10001287 3300010375 Bacteria 33848
62 Ga0157373_10016805 3300013100 Bacteria 5334
63 Ga0157371_10000118 3300013102 Bacteria 120790
64 Ga0157370_10000038 3300013104 Bacteria 135182
65 Ga0157370_10000216 3300013104 Bacteria 73339
66 Ga0157369_10000515 3300013105 Bacteria 50852
67 Ga0157369_10001092 3300013105 Bacteria 33907
68 Ga0157369_10001320 3300013105 Bacteria 30734
69 Ga0157374_10000033 3300013296 Bacteria 185818
70 Ga0157372_10000095 3300013307 Bacteria 91464
71 Ga0157372_10000399 3300013307 Bacteria 47919
72 Ga0157372_10326180 3300013307 Bacteria 1787
73 Ga0182006_1000970 3300015261 Bacteria 19004
74 Ga0182006_1038066 3300015261 Bacteria 1904
75 Ga0206351_10635506 3300020077 Bacteria 5746
76 Ga0154015_1632978 3300020610 Bacteria 2117
77 Ga0224712_10000023 3300022467 Bacteria 23162
78 Ga0209436_100176 3300025208 Bacteria 30384
79 Ga0209436_100560 3300025208 Bacteria 16050
80 Ga0209784_100006 3300025224 Bacteria 930704
81 Ga0209784_100108 3300025224 Bacteria 94409
82 Ga0209566_100002 3300025225 Bacteria 2614868
83 Ga0209674_100097 3300025226 Bacteria 167285
84 Ga0209672_100252 3300025228 Bacteria 39846
85 Ga0209672_100369 3300025228 Bacteria 27792
86 Ga0209147_100018 3300025229 Bacteria 515719
87 Ga0209563_100136 3300025230 Bacteria 88047
88 Ga0209258_100028 3300025242 Bacteria 515719
89 Ga0207425_1000357 3300025245 Bacteria 31681
90 Ga0209646_1000358 3300025246 Bacteria 31663
91 Ga0209677_100007 3300025253 Bacteria 1021332
92 Ga0209148_1000286 3300025254 Bacteria 75823
93 Ga0209759_1001518 3300025256 Bacteria 12774
94 Ga0209759_1001734 3300025256 Bacteria 11218
95 Ga0209759_1003259 3300025256 Bacteria 6558
96 Ga0209759_1010618 3300025256 Bacteria 2687
97 Ga0209129_1001761 3300025258 Bacteria 11606
98 Ga0209565_1006355 3300025263 Bacteria 3323
99 Ga0209455_1000107 3300025272 Bacteria 195136
100 Ga0209673_1011245 3300025273 Bacteria 3703
101 Ga0209130_1000511 3300025284 Bacteria 39249
102 Ga0209130_1001045 3300025284 Bacteria 21014
103 Ga0209675_1001511 3300025291 Bacteria 13314
104 Ga0209675_1001557 3300025291 Bacteria 13009
105 Ga0209564_1000087 3300025295 Bacteria 250787
106 Ga0209564_1001694 3300025295 Bacteria 20890
107 Ga0209564_1012101 3300025295 Bacteria 3794
108 Ga0209050_1000320 3300025298 Bacteria 96836
109 Ga0209050_1000891 3300025298 Bacteria 39717
110 Ga0209256_1002085 3300025299 Bacteria 17555
111 Ga0209256_1003696 3300025299 Bacteria 10394
112 Ga0209257_1000010 3300025304 Bacteria 1158682
113 Ga0209257_1009009 3300025304 Bacteria 5477
114 Ga0207647_10004373 3300025904 Bacteria 10479
115 Ga0207705_10045692 3300025909 Bacteria 3146
116 Ga0207705_10093755 3300025909 Bacteria 2201
117 Ga0207695_10000879 3300025913 Bacteria 54696
118 Ga0207695_10002200 3300025913 Bacteria 29366
119 Ga0207657_10000269 3300025919 Bacteria 55259
120 Ga0207649_10000092 3300025920 Bacteria 74672
121 Ga0207690_10006763 3300025932 Bacteria 6795
122 Ga0207679_10000095 3300025945 Bacteria 77070
123 Ga0207667_10001320 3300025949 Bacteria 31138
124 Ga0207667_10001911 3300025949 Bacteria 26151
125 Ga0207640_10000029 3300025981 Bacteria 130583
126 Ga0207678_10000031 3300026067 Bacteria 112136
127 Ga0207702_10000083 3300026078 Bacteria 106990
128 Ga0207674_10029708 3300026116 Bacteria 5752
129 Ga0207674_10075828 3300026116 Bacteria 3372
130 Ga0207698_10031536 3300026142 Bacteria 3827
131 Ga0268266_10011593 3300028379 Bacteria 7652
132 Ga0307511_10029932 3300030521 Bacteria 4902
133 Ga0307513_10002201 3300031456 Bacteria 27229
134 Ga0307408_100000506 3300031548 Bacteria 33835
135 Ga0307408_100007823 3300031548 Bacteria 7064
136 Ga0307408_100044928 3300031548 Bacteria 3152
137 Ga0307409_100015692 3300031995 Bacteria 4981
138 Ga0307416_100001366 3300032002 Bacteria 13176
139 Ga0307414_10099111 3300032004 Bacteria 2188
140 Ga0307411_10003404 3300032005 Bacteria 7373
141 Ga0307415_100019094 3300032126 Bacteria 4155
142 Ga0373959_0000324 3300034820 Bacteria 9855
143 Ga0395899_0000007 3300037312 Bacteria 629129
144 Ga0395899_0003252 3300037312 Bacteria 12877
145 Ga0395899_0078766 3300037312 Bacteria 2401
146 Ga0395900_0000026 3300037418 Bacteria 313470
147 Ga0395900_0000549 3300037418 Bacteria 52145
148 Ga0395900_0017349 3300037418 Bacteria 7350
149 Ga0395900_0027909 3300037418 Bacteria 5782
150 Ga0395900_0159335 3300037418 Bacteria 2303
151 Ga0395898_0000085 3300037466 Bacteria 240992
152 Ga0395898_0001304 3300037466 Bacteria 36331
153 Ga0395898_0242129 3300037466 Bacteria 1720
154 Ga0395905_0001886 3300037471 Bacteria 24164
155 Ga0395901_0000045 3300038443 Bacteria 188874
156 Ga0395901_0000088 3300038443 Bacteria 124938
157 Ga0395901_0000130 3300038443 Bacteria 97728
158 Ga0395901_0003633 3300038443 Bacteria 15561
159 Ga0395901_0026407 3300038443 Bacteria 5962
160 Ga0439439_0010067 3300041406 Bacteria 2257
161 Ga0439434_0009399 3300042435 Bacteria 2873
162 Ga0466986_0018554 3300044650 Bacteria 4537
163 Ga0466969_0001334 3300044656 Bacteria 13325
164 Ga0466969_0010471 3300044656 Bacteria 4915
165 Ga0466969_0018497 3300044656 Bacteria 3628
166 Ga0466972_0001156 3300044658 Bacteria 12633
167 Ga0466978_0005733 3300044671 Bacteria 6210
168 Ga0466965_0005100 3300044683 Bacteria 5893
169 Ga0466965_0012600 3300044683 Bacteria 3980
170 Ga0466965_0016062 3300044683 Bacteria 3557
171 Ga0466966_0000061 3300044684 Bacteria 79168
172 Ga0466966_0001027 3300044684 Bacteria 17851
173 Ga0466966_0018073 3300044684 Bacteria 4654
174 Ga0466966_0040012 3300044684 Bacteria 3017
175 Ga0466966_0080298 3300044684 Bacteria 2032
176 Ga0466961_0000094 3300044693 Bacteria 56861
177 Ga0466961_0000395 3300044693 Bacteria 27987
178 Ga0466961_0001211 3300044693 Bacteria 15859
179 Ga0466963_0003957 3300044694 Bacteria 8571
180 Ga0466963_0061307 3300044694 Bacteria 2514
181 Ga0466964_0005051 3300044706 Bacteria 4878
182 Ga0453684_0055730 3300044712 Bacteria 5137
183 Ga0466971_0000635 3300044719 Bacteria 14019
184 Ga0466971_0003860 3300044719 Bacteria 6425
185 Ga0466968_0007553 3300044735 Bacteria 4137
186 Ga0466970_0000102 3300044765 Bacteria 37087
187 Ga0466970_0008133 3300044765 Bacteria 5266
188 Ga0466957_0001746 3300044842 Bacteria 11434
189 Ga0466957_0004836 3300044842 Bacteria 7535
190 Ga0466957_0039080 3300044842 Bacteria 2862
191 Ga0466959_0000809 3300045049 Bacteria 18415
192 Ga0466959_0011713 3300045049 Bacteria 6308
193 Ga0466959_0021918 3300045049 Bacteria 4718
194 Ga0466958_0001568 3300045836 Bacteria 10965
195 Ga0466958_0022418 3300045836 Bacteria 3699
196 Ga0466958_0031956 3300045836 Bacteria 3129
197 Ga0466958_0054721 3300045836 Bacteria 2420
198 Ga0466958_0096518 3300045836 Bacteria 1833
199 Ga0466967_0027445 3300045976 Bacteria 4736
200 Ga0495617_004080 3300046452 Bacteria 5361
201 Ga0495591_000096 3300046458 Bacteria 100625
202 Ga0495650_0025197 3300046471 Bacteria 2793
203 Ga0495583_0000809 3300046506 Bacteria 38609
204 Ga0495648_0000060 3300046524 Bacteria 152166
205 Ga0495609_0001484 3300046538 Bacteria 15571
206 Ga0495656_0023909 3300046615 Bacteria 2408
207 Ga0495636_0002530 3300047318 Bacteria 7018
208 Ga0495672_0000112 3300047320 Bacteria 130094
209 Ga0495615_0002457 3300048090 Bacteria 2974
210 Ga0496101_0145303 3300048904 Bacteria 1811
211 Ga0496109_0222011 3300048912 Bacteria 1777
212 Ga0496110_0001203 3300048913 Bacteria 18420
213 Ga0496117_0000120 3300048920 Bacteria 171697
214 Ga0496125_0006795 3300048928 Bacteria 12287
215 Ga0496126_0004387 3300048929 Bacteria 16912
216 Ga0501279_001560 3300049775 Bacteria 3017
217 Ga0501035_0000929 3300049822 Bacteria 31004
218 nmdc:mga05p37_2270_c1 3300050507 Bacteria 22406
219 nmdc:mga09592_18_c2 3300050508 Bacteria 52368
220 nmdc:mga0qj67_9_c1 3300050509 Bacteria 52451
221 nmdc:mga06r32_1693_c1 3300050510 Bacteria 19860
222 nmdc:mga08y16_11807_c1 3300050511 Bacteria 9173
223 Ga0500616_0000021 3300053153 Bacteria 484527
224 Ga0466962_0000697 3300061719 Bacteria 14963
225 Ga0466962_0016976 3300061719 Bacteria 3506

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0159335 Ga0395900_0159335_59_1471 467
2 3300001979 JGI24740J21852_10028226 JGI24740J21852_100282262 470
3 3300001990 JGI24737J22298_10015675 JGI24737J22298_100156753 470
4 3300005347 Ga0070668_100102594 Ga0070668_1001025942 470
5 3300025904 Ga0207647_10004373 Ga0207647_100043737 470
6 3300026116 Ga0207674_10029708 Ga0207674_100297085 470
7 3300013307 Ga0157372_10326180 Ga0157372_103261802 471
8 3300037312 Ga0395899_0078766 Ga0395899_0078766_472_1956 471
9 3300038443 Ga0395901_0000088 Ga0395901_0000088_42531_44015 471
10 iso_pu_bacteria 2643221692 2644516378 475
11 3300037312 Ga0395899_0000007 Ga0395899_0000007_473375_474898 476
12 3300037418 Ga0395900_0000026 Ga0395900_0000026_157716_159239 476
13 3300037466 Ga0395898_0000085 Ga0395898_0000085_85251_86774 476
14 iso_pu_bacteria 2738541264 2738666511 477
15 iso_pu_bacteria 2738541356 2739146435 477
16 iso_pu_bacteria 2744054611 2744955946 477
17 iso_pu_bacteria 2919713450 2919720225 477
18 3300045836 Ga0466958_0096518 Ga0466958_0096518_313_1794 478
19 3300046538 Ga0495609_0001484 Ga0495609_0001484_11816_13372 478
20 3300046524 Ga0495648_0000060 Ga0495648_0000060_58444_59994 479
21 3300046615 Ga0495656_0023909 Ga0495656_0023909_80_1630 479
22 3300047320 Ga0495672_0000112 Ga0495672_0000112_74849_76399 479
23 3300005548 Ga0070665_100014982 Ga0070665_1000149825 480
24 3300006846 Ga0075430_100021119 Ga0075430_1000211192 480
25 3300028379 Ga0268266_10011593 Ga0268266_100115935 480
26 iso_pu_bacteria 2643221554 2643788505 480
27 iso_pu_bacteria 2643221638 2644214997 480
28 iso_pu_bacteria 2816332119 2816424049 481
29 3300031548 Ga0307408_100000506 Ga0307408_10000050622 482
30 3300049822 Ga0501035_0000929 Ga0501035_0000929_25230_26687 482
31 3300002739 JGI25158J39367_1000695 JGI25158J39367_10006954 484
32 3300002987 JGI25159J45721_1001515 JGI25159J45721_10015154 484
33 3300003374 JGI25161J50226_1000202 JGI25161J50226_100020234 484
34 3300003771 Ga0055526_1001454 Ga0055526_100145413 484
35 3300003775 Ga0055524_1000965 Ga0055524_10009658 484
36 3300003791 Ga0055530_10000617 Ga0055530_1000061719 484
37 3300004625 Ga0055543_1000260 Ga0055543_100026035 484
38 3300005262 Ga0065165_1002919 Ga0065165_100291912 484
39 3300025208 Ga0209436_100560 Ga0209436_1005605 484
40 3300025284 Ga0209130_1000511 Ga0209130_10005115 484
41 3300025291 Ga0209675_1001557 Ga0209675_10015574 484
42 3300025295 Ga0209564_1000087 Ga0209564_10000878 484
43 3300025295 Ga0209564_1012101 Ga0209564_10121012 484
44 3300025298 Ga0209050_1000891 Ga0209050_100089123 484
45 3300025299 Ga0209256_1002085 Ga0209256_10020858 484
46 3300032002 Ga0307416_100001366 Ga0307416_10000136610 484
47 3300037418 Ga0395900_0000549 Ga0395900_0000549_18425_19948 484
48 3300047318 Ga0495636_0002530 Ga0495636_0002530_606_2063 484
49 3300048090 Ga0495615_0002457 Ga0495615_0002457_531_1988 484
50 3300048920 Ga0496117_0000120 Ga0496117_0000120_37740_39194 484
51 3300049775 Ga0501279_001560 Ga0501279_001560_1302_2756 484
52 3300053153 Ga0500616_0000021 Ga0500616_0000021_1249_2703 484
53 3300002739 JGI25158J39367_1000370 JGI25158J39367_10003705 485
54 3300003771 Ga0055526_1001917 Ga0055526_10019174 485
55 3300003773 Ga0055537_1004687 Ga0055537_10046872 485
56 3300003775 Ga0055524_1001545 Ga0055524_10015457 485
57 3300003791 Ga0055530_10009130 Ga0055530_100091303 485
58 3300003791 Ga0055530_10009136 Ga0055530_100091363 485
59 3300003794 Ga0055531_10006661 Ga0055531_100066616 485
60 3300025208 Ga0209436_100176 Ga0209436_10017618 485
61 3300025245 Ga0207425_1000357 Ga0207425_100035721 485
62 3300025258 Ga0209129_1001761 Ga0209129_10017616 485
63 3300025263 Ga0209565_1006355 Ga0209565_10063553 485
64 3300025273 Ga0209673_1011245 Ga0209673_10112454 485
65 3300025284 Ga0209130_1001045 Ga0209130_100104519 485
66 3300025291 Ga0209675_1001511 Ga0209675_100151110 485
67 3300025295 Ga0209564_1001694 Ga0209564_100169412 485
68 3300025298 Ga0209050_1000320 Ga0209050_100032065 485
69 3300025299 Ga0209256_1003696 Ga0209256_10036966 485
70 3300025304 Ga0209257_1000010 Ga0209257_1000010237 485
71 3300025304 Ga0209257_1009009 Ga0209257_10090095 485
72 3300031548 Ga0307408_100007823 Ga0307408_1000078234 485
73 3300006844 Ga0075428_100003659 Ga0075428_1000036596 486
74 3300006846 Ga0075430_100014119 Ga0075430_1000141196 486
75 3300006847 Ga0075431_100019212 Ga0075431_1000192126 486
76 3300006880 Ga0075429_100014582 Ga0075429_1000145826 486
77 3300009147 Ga0114129_10003894 Ga0114129_1000389420 486
78 3300031995 Ga0307409_100015692 Ga0307409_1000156924 486
79 3300032004 Ga0307414_10099111 Ga0307414_100991112 486
80 3300032005 Ga0307411_10003404 Ga0307411_100034044 486
81 3300032126 Ga0307415_100019094 Ga0307415_1000190943 486
82 3300044683 Ga0466965_0012600 Ga0466965_0012600_1205_2716 486
83 3300044684 Ga0466966_0018073 Ga0466966_0018073_2237_3748 486
84 3300044735 Ga0466968_0007553 Ga0466968_0007553_1488_2999 486
85 3300044765 Ga0466970_0008133 Ga0466970_0008133_3589_5100 486
86 3300044842 Ga0466957_0039080 Ga0466957_0039080_1049_2560 486
87 3300045836 Ga0466958_0031956 Ga0466958_0031956_308_1819 486
88 3300050507 nmdc:mga05p37_2270_c1 nmdc:mga05p37_2270_c1_4047_5507 486
89 3300050508 nmdc:mga09592_18_c2 nmdc:mga09592_18_c2_33909_35369 486
90 3300050509 nmdc:mga0qj67_9_c1 nmdc:mga0qj67_9_c1_16981_18441 486
91 3300050510 nmdc:mga06r32_1693_c1 nmdc:mga06r32_1693_c1_16872_18332 486
92 3300046452 Ga0495617_004080 Ga0495617_004080_1414_2958 487
93 3300046458 Ga0495591_000096 Ga0495591_000096_60835_62379 487
94 iso_pu_bacteria 2515154123 2515689256 487
95 iso_pu_bacteria 8001781756 8001786721 487
96 3300005466 Ga0070685_10000798 Ga0070685_1000079812 488
97 3300046471 Ga0495650_0025197 Ga0495650_0025197_1146_2621 488
98 3300037312 Ga0395899_0003252 Ga0395899_0003252_8884_10353 489
99 3300037471 Ga0395905_0001886 Ga0395905_0001886_11963_13432 489
100 3300038443 Ga0395901_0003633 Ga0395901_0003633_12657_14126 489
101 3300041406 Ga0439439_0010067 Ga0439439_0010067_373_1863 489
102 3300042435 Ga0439434_0009399 Ga0439434_0009399_799_2289 489
103 3300044656 Ga0466969_0001334 Ga0466969_0001334_2025_3506 489
104 3300044683 Ga0466965_0005100 Ga0466965_0005100_2184_3665 489
105 3300044693 Ga0466961_0001211 Ga0466961_0001211_11950_13431 489
106 3300044719 Ga0466971_0000635 Ga0466971_0000635_1438_2919 489
107 3300044842 Ga0466957_0004836 Ga0466957_0004836_299_1780 489
108 3300045049 Ga0466959_0011713 Ga0466959_0011713_4724_6205 489
109 3300005327 Ga0070658_10024820 Ga0070658_100248203 490
110 3300005327 Ga0070658_10061298 Ga0070658_100612982 490
111 3300005339 Ga0070660_100000110 Ga0070660_10000011039 490
112 3300005366 Ga0070659_100007800 Ga0070659_1000078006 490
113 3300005563 Ga0068855_100000976 Ga0068855_1000009768 490
114 3300005563 Ga0068855_100106614 Ga0068855_1001066142 490
115 3300009093 Ga0105240_10003095 Ga0105240_1000309513 490
116 3300009093 Ga0105240_10147177 Ga0105240_101471772 490
117 3300009545 Ga0105237_10009504 Ga0105237_100095046 490
118 3300010375 Ga0105239_10001287 Ga0105239_100012877 490
119 3300013100 Ga0157373_10016805 Ga0157373_100168052 490
120 3300013104 Ga0157370_10000216 Ga0157370_1000021615 490
121 3300013105 Ga0157369_10000515 Ga0157369_1000051531 490
122 3300013296 Ga0157374_10000033 Ga0157374_1000003348 490
123 3300013307 Ga0157372_10000399 Ga0157372_100003992 490
124 3300015261 Ga0182006_1038066 Ga0182006_10380662 490
125 3300025228 Ga0209672_100369 Ga0209672_10036915 490
126 3300025256 Ga0209759_1003259 Ga0209759_10032595 490
127 3300025909 Ga0207705_10045692 Ga0207705_100456922 490
128 3300025909 Ga0207705_10093755 Ga0207705_100937552 490
129 3300025913 Ga0207695_10000879 Ga0207695_1000087917 490
130 3300025919 Ga0207657_10000269 Ga0207657_1000026939 490
131 3300025949 Ga0207667_10001320 Ga0207667_1000132011 490
132 3300025949 Ga0207667_10001911 Ga0207667_1000191121 490
133 3300037418 Ga0395900_0027909 Ga0395900_0027909_3446_4927 490
134 3300037466 Ga0395898_0001304 Ga0395898_0001304_13001_14563 490
135 3300037466 Ga0395898_0242129 Ga0395898_0242129_47_1528 490
136 3300038443 Ga0395901_0000045 Ga0395901_0000045_50961_52502 490
137 3300044656 Ga0466969_0018497 Ga0466969_0018497_1267_2751 490
138 3300044684 Ga0466966_0000061 Ga0466966_0000061_27359_28876 490
139 3300044684 Ga0466966_0001027 Ga0466966_0001027_15209_16750 490
140 3300044684 Ga0466966_0040012 Ga0466966_0040012_1264_2748 490
141 3300044693 Ga0466961_0000395 Ga0466961_0000395_11127_12644 490
142 3300044694 Ga0466963_0061307 Ga0466963_0061307_483_2000 490
143 3300044719 Ga0466971_0003860 Ga0466971_0003860_3531_5048 490
144 3300044842 Ga0466957_0001746 Ga0466957_0001746_9834_11375 490
145 3300045049 Ga0466959_0021918 Ga0466959_0021918_1968_3452 490
146 3300045836 Ga0466958_0001568 Ga0466958_0001568_405_1934 490
147 3300045836 Ga0466958_0022418 Ga0466958_0022418_72_1589 490
148 3300045836 Ga0466958_0054721 Ga0466958_0054721_525_2066 490
149 3300061719 Ga0466962_0000697 Ga0466962_0000697_7446_8987 490
150 3300061719 Ga0466962_0016976 Ga0466962_0016976_36_1553 490
151 iso_pu_bacteria 2551306166 2552107077 492
152 3300034820 Ga0373959_0000324 Ga0373959_0000324_5208_6695 494
153 3300038443 Ga0395901_0000130 Ga0395901_0000130_48848_50398 494
154 3300038443 Ga0395901_0026407 Ga0395901_0026407_4238_5722 494
155 3300031548 Ga0307408_100044928 Ga0307408_1000449282 495
156 3300013105 Ga0157369_10001320 Ga0157369_1000132019 496
157 3300022467 Ga0224712_10000023 Ga0224712_100000236 496
158 3300048904 Ga0496101_0145303 Ga0496101_0145303_203_1693 496
159 3300048912 Ga0496109_0222011 Ga0496109_0222011_222_1712 496
160 3300048913 Ga0496110_0001203 Ga0496110_0001203_15258_16763 501
161 3300005617 Ga0068859_100064038 Ga0068859_1000640382 504
162 3300005618 Ga0068864_100092624 Ga0068864_1000926242 504
163 3300006931 Ga0097620_100064037 Ga0097620_1000640372 504
164 3300048929 Ga0496126_0004387 Ga0496126_0004387_11858_13405 504
165 3300046506 Ga0495583_0000809 Ga0495583_0000809_36409_37962 506
166 3300030521 Ga0307511_10029932 Ga0307511_100299322 507
167 3300044712 Ga0453684_0055730 Ga0453684_0055730_2002_3648 507
168 3300031456 Ga0307513_10002201 Ga0307513_1000220116 511
169 3300009094 Ga0111539_10004299 Ga0111539_1000429917 517
170 3300050511 nmdc:mga08y16_11807_c1 nmdc:mga08y16_11807_c1_2222_3787 517
171 iso_pu_bacteria 2885266251 2885269298 521
172 3300001979 JGI24740J21852_10001046 JGI24740J21852_1000104611 522
173 3300002705 JGI25156J39149_1008174 JGI25156J39149_10081742 525
174 3300002738 JGI25154J39366_1001404 JGI25154J39366_10014041 525
175 3300003762 Ga0055542_1001294 Ga0055542_10012942 525
176 3300025246 Ga0209646_1000358 Ga0209646_100035820 525
177 3300025254 Ga0209148_1000286 Ga0209148_100028631 525
178 3300025256 Ga0209759_1001518 Ga0209759_10015184 525
179 iso_pu_bacteria 2596583598 2597032516 527
180 iso_pu_bacteria 2599185178 2599448363 527
181 iso_pu_bacteria 2900577576 2900577968 527
182 iso_pu_bacteria 2928058823 2928060406 527
183 3300001915 JGI24741J21665_1000121 JGI24741J21665_100012110 531
184 3300001979 JGI24740J21852_10005653 JGI24740J21852_100056534 531
185 3300003752 Ga0055539_1000194 Ga0055539_100019426 531
186 3300003756 Ga0055533_1003251 Ga0055533_10032511 531
187 3300003758 Ga0055532_1000139 Ga0055532_100013947 531
188 3300003759 Ga0055525_1000454 Ga0055525_100045412 531
189 3300003761 Ga0055535_1000161 Ga0055535_100016147 531
190 3300003763 Ga0055529_1000292 Ga0055529_100029247 531
191 3300005344 Ga0070661_100000379 Ga0070661_10000037937 531
192 3300005366 Ga0070659_100045021 Ga0070659_1000450212 531
193 3300005455 Ga0070663_100000026 Ga0070663_10000002693 531
194 3300005564 Ga0070664_100000014 Ga0070664_10000001495 531
195 3300005577 Ga0068857_100003853 Ga0068857_1000038535 531
196 3300005578 Ga0068854_100000029 Ga0068854_10000002924 531
197 3300005614 Ga0068856_100000090 Ga0068856_10000009037 531
198 3300005616 Ga0068852_100013382 Ga0068852_1000133822 531
199 3300009093 Ga0105240_10015343 Ga0105240_100153432 531
200 3300013102 Ga0157371_10000118 Ga0157371_1000011829 531
201 3300013104 Ga0157370_10000038 Ga0157370_10000038106 531
202 3300013105 Ga0157369_10001092 Ga0157369_1000109228 531
203 3300013307 Ga0157372_10000095 Ga0157372_1000009571 531
204 3300015261 Ga0182006_1000970 Ga0182006_100097014 531
205 3300020077 Ga0206351_10635506 Ga0206351_106355061 531
206 3300020610 Ga0154015_1632978 Ga0154015_16329782 531
207 3300025224 Ga0209784_100006 Ga0209784_10000637 531
208 3300025224 Ga0209784_100108 Ga0209784_10010888 531
209 3300025225 Ga0209566_100002 Ga0209566_10000237 531
210 3300025226 Ga0209674_100097 Ga0209674_10009737 531
211 3300025228 Ga0209672_100252 Ga0209672_10025223 531
212 3300025229 Ga0209147_100018 Ga0209147_100018446 531
213 3300025230 Ga0209563_100136 Ga0209563_10013647 531
214 3300025242 Ga0209258_100028 Ga0209258_100028446 531
215 3300025253 Ga0209677_100007 Ga0209677_10000737 531
216 3300025256 Ga0209759_1001734 Ga0209759_10017345 531
217 3300025256 Ga0209759_1010618 Ga0209759_10106182 531
218 3300025272 Ga0209455_1000107 Ga0209455_1000107146 531
219 3300025913 Ga0207695_10002200 Ga0207695_1000220014 531
220 3300025920 Ga0207649_10000092 Ga0207649_1000009237 531
221 3300025932 Ga0207690_10006763 Ga0207690_100067632 531
222 3300025945 Ga0207679_10000095 Ga0207679_1000009537 531
223 3300025981 Ga0207640_10000029 Ga0207640_1000002940 531
224 3300026067 Ga0207678_10000031 Ga0207678_1000003122 531
225 3300026078 Ga0207702_10000083 Ga0207702_1000008337 531
226 3300026116 Ga0207674_10075828 Ga0207674_100758283 531
227 3300026142 Ga0207698_10031536 Ga0207698_100315362 531
228 3300037418 Ga0395900_0017349 Ga0395900_0017349_2411_4033 531
229 3300044650 Ga0466986_0018554 Ga0466986_0018554_1477_3099 531
230 3300044656 Ga0466969_0010471 Ga0466969_0010471_2610_4235 531
231 3300044658 Ga0466972_0001156 Ga0466972_0001156_7257_8882 531
232 3300044671 Ga0466978_0005733 Ga0466978_0005733_1779_3404 531
233 3300044683 Ga0466965_0016062 Ga0466965_0016062_414_2039 531
234 3300044684 Ga0466966_0080298 Ga0466966_0080298_223_1848 531
235 3300044693 Ga0466961_0000094 Ga0466961_0000094_29220_30845 531
236 3300044694 Ga0466963_0003957 Ga0466963_0003957_2835_4460 531
237 3300044706 Ga0466964_0005051 Ga0466964_0005051_129_1754 531
238 3300044765 Ga0466970_0000102 Ga0466970_0000102_17047_18672 531
239 3300045049 Ga0466959_0000809 Ga0466959_0000809_10920_12545 531
240 3300045976 Ga0466967_0027445 Ga0466967_0027445_433_2058 531
241 3300048928 Ga0496125_0006795 Ga0496125_0006795_10183_11805 531

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

38

106

0.97

PF00890

FAD_binding_2

FAD binding domain

35

76

0.96

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

37

251

0.82

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

83

232

0.75

PF00743

FMO-like

Flavin-binding monooxygenase-like

34

383

0.72

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

34

253

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z3y-assembly1.cif.gz_A crystal structure of lysine-specific demethylase1 0.9136 26 64
2z5u-assembly1.cif.gz_A crystal structure of lysine-specific histone demethylase 1 0.9134 26 64
6y48-assembly4.cif.gz_D baeyer-villiger monooxygenase bvmoafl210 from aspergillus flavus in complex with nadp 0.903 25 507
2ylx-assembly1.cif.gz_A snapshots of enzymatic baeyer-villiger catalysis: oxygen activation and intermediate stabilization: asp66ala mutant in complex with nadp and mes 0.8915 23 498
2ym1-assembly1.cif.gz_A snapshots of enzymatic baeyer-villiger catalysis: oxygen activation and intermediate stabilization: arg337lys mutant in complex with nadp 0.8851 22 498
ID Description Score Start End Superfamily
af_F1Q7C3_11_250_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9733 31 64 3.50.50.60
af_P71662_1_248_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9718 26 263 3.50.50.60
af_B8A458_28_267_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9692 31 64 3.50.50.60
af_B8JJQ4_15_251_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9617 30 64 3.50.50.60
af_Q9VVK2_20_241_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9592 30 64 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A535EX42-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9917 26 137
AF-A0A7H4GQM2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9844 25 509 GO:0016020
AF-A0A7X6P3E2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9785 26 162
AF-A0A062GN32-F1-model_v4 NAD(P)-binding Rossmann-like domain protein 0.9784 26 142 GO:0016020
AF-A0A538K5N2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9781 22 509 GO:0004499
GO:0050660
GO:0050661

Feature Viewer

pLDDT pTM Quality
87.61 0.86 High
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Predicted Structure (AlphaFold2)

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