F353251

General Info

Members Datasets Scaffolds Average Seq Length
240 181 480 120

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_1051335|Ga0501033_1051335_38_454
Length 138
Sequence VRADRHATDARLGPDEGDRLVNVDYPFHFDGRGRTATTGGDDHVRDLIEQLLFTVPGERVNRPDFGSGLLQLTFAPLSDELATATQLLVQGALEQWLGDLIAVERVQVAREDAVLTVAVEYVVQRSGERRTDTFERAA

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
82 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
83 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
84 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
93 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
94 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
97 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
109 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
110 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
111 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
112 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
113 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
114 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
115 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
116 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
117 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
118 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
119 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
122 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
123 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
124 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
125 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
126 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
127 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
128 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
129 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
130 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
135 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
136 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
143 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
163 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
175 2643221569 Achromobacter sp. Root565 Isolate Unclassified
176 2643221594 Achromobacter sp. Root170 Isolate Unclassified
177 2643221621 Achromobacter sp. Root83 Isolate Unclassified
178 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
179 2831426010 Nostoc sp. 106C Isolate Unclassified
180 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
181 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.67
Metatranscriptomes 0
Isolates 3.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.08
Nodule 0
Rhizoplane 0.83
Rhizosphere 86.67
Stem 0
Stem Tuber 0
Unclassified 10.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_1051335 3300049570 Bacteria 543
2 rootH2_10077974 3300003320 Bacteria 1136
3 Ga0055536_1073869 3300003781 Bacteria 664
4 Ga0055530_10082170 3300003791 Bacteria 674
5 Ga0065704_10080955 3300005289 Bacteria 3848
6 Ga0065707_10088128 3300005295 Bacteria 4765
7 Ga0065707_10136455 3300005295 Bacteria 1834
8 Ga0070690_101671108 3300005330 Bacteria 517
9 Ga0070682_100150414 3300005337 Bacteria 1597
10 Ga0070682_101787080 3300005337 Bacteria 536
11 Ga0070674_100170394 3300005356 Bacteria 1659
12 Ga0070673_100232934 3300005364 Bacteria 1598
13 Ga0070667_100984711 3300005367 Bacteria 786
14 Ga0070714_101238442 3300005435 Bacteria 728
15 Ga0070705_100369943 3300005440 Bacteria 1051
16 Ga0070708_100528929 3300005445 Bacteria 1112
17 Ga0070708_101170956 3300005445 Bacteria 719
18 Ga0070681_11114991 3300005458 Bacteria 710
19 Ga0070706_100000054 3300005467 Bacteria 138243
20 Ga0070706_100001593 3300005467 Bacteria 23652
21 Ga0070707_100013888 3300005468 Bacteria 7543
22 Ga0070707_100383489 3300005468 Bacteria 1365
23 Ga0070707_100446990 3300005468 Bacteria 1253
24 Ga0070698_100067512 3300005471 Bacteria 3596
25 Ga0070699_100290033 3300005518 Bacteria 1467
26 Ga0070699_100870834 3300005518 Unclassified 825
27 Ga0070697_100000013 3300005536 Bacteria 148364
28 Ga0070697_100000140 3300005536 Bacteria 58765
29 Ga0068853_100556556 3300005539 Bacteria 1087
30 Ga0070672_100678090 3300005543 Bacteria 901
31 Ga0070693_100443503 3300005547 Bacteria 909
32 Ga0070665_100007361 3300005548 Bacteria 11196
33 Ga0070665_100432850 3300005548 Bacteria 1325
34 Ga0070665_100583063 3300005548 Unclassified 1131
35 Ga0070665_101257692 3300005548 Bacteria 750
36 Ga0070665_101731038 3300005548 Bacteria 632
37 Ga0068855_100417103 3300005563 Bacteria 1469
38 Ga0070664_101297716 3300005564 Bacteria 687
39 Ga0068857_102064243 3300005577 Unclassified 559
40 Ga0068856_100111026 3300005614 Bacteria 2739
41 Ga0081455_10108237 3300005937 Bacteria 2214
42 Ga0081539_10031820 3300005985 Unclassified 3245
43 Ga0070717_10000134 3300006028 Bacteria 54840
44 Ga0070717_10483070 3300006028 Bacteria 1119
45 Ga0075363_100023051 3300006048 Bacteria 3152
46 Ga0075362_10096916 3300006177 Bacteria 1375
47 Ga0075367_10026169 3300006178 Bacteria 3306
48 Ga0075366_10041900 3300006195 Bacteria 2711
49 Ga0075370_10006811 3300006353 Bacteria 5777
50 Ga0075370_10854207 3300006353 Bacteria 556
51 Ga0075430_100529052 3300006846 Bacteria 972
52 Ga0075430_100780739 3300006846 Bacteria 787
53 Ga0075431_100697283 3300006847 Bacteria 993
54 Ga0075429_100070866 3300006880 Unclassified 3035
55 Ga0075436_100481585 3300006914 Unclassified 906
56 Ga0105240_10011296 3300009093 Bacteria 12444
57 Ga0105240_10061889 3300009093 Unclassified 4662
58 Ga0105240_10727530 3300009093 Bacteria 1081
59 Ga0105240_11399298 3300009093 Bacteria 735
60 Ga0114129_10000752 3300009147 Bacteria 41221
61 Ga0105241_10161045 3300009174 Bacteria 1844
62 Ga0105248_10112572 3300009177 Unclassified 3069
63 Ga0105248_12035586 3300009177 Bacteria 652
64 Ga0105237_10001683 3300009545 Bacteria 28617
65 Ga0105237_10019120 3300009545 Bacteria 7079
66 Ga0105238_10182361 3300009551 Bacteria 2076
67 Ga0105249_11102984 3300009553 Bacteria 864
68 Ga0105249_12644492 3300009553 Bacteria 574
69 Ga0105239_10002819 3300010375 Bacteria 21741
70 Ga0105239_10062614 3300010375 Unclassified 4083
71 Ga0105239_13445646 3300010375 Bacteria 514
72 Ga0157370_10014885 3300013104 Bacteria 7936
73 Ga0163162_10013307 3300013306 Bacteria 8036
74 Ga0163163_11878331 3300014325 Bacteria 659
75 Ga0157380_10058269 3300014326 Bacteria 3079
76 Ga0157379_10976071 3300014968 Bacteria 807
77 Ga0209148_1026901 3300025254 Bacteria 889
78 Ga0209676_1045464 3300025292 Bacteria 1195
79 Ga0209050_1005151 3300025298 Bacteria 8378
80 Ga0207684_10000047 3300025910 Bacteria 244386
81 Ga0207684_10001536 3300025910 Bacteria 24717
82 Ga0207684_10329987 3300025910 Bacteria 1314
83 Ga0207654_10127024 3300025911 Bacteria 1609
84 Ga0207707_11209030 3300025912 Bacteria 611
85 Ga0207695_10028305 3300025913 Bacteria 6219
86 Ga0207695_10071126 3300025913 Unclassified 3553
87 Ga0207695_10292380 3300025913 Bacteria 1521
88 Ga0207671_10006284 3300025914 Bacteria 10609
89 Ga0207671_10185496 3300025914 Bacteria 1620
90 Ga0207646_10025347 3300025922 Bacteria 5426
91 Ga0207646_10061808 3300025922 Bacteria 3343
92 Ga0207646_10390297 3300025922 Bacteria 1258
93 Ga0207694_10083657 3300025924 Bacteria 2509
94 Ga0207700_10541433 3300025928 Bacteria 1033
95 Ga0207669_10131813 3300025937 Unclassified 1719
96 Ga0207711_10143612 3300025941 Unclassified 2149
97 Ga0207667_11523728 3300025949 Bacteria 639
98 Ga0207651_10190059 3300025960 Bacteria 1637
99 Ga0207712_11290933 3300025961 Bacteria 652
100 Ga0207668_10000267 3300025972 Bacteria 34644
101 Ga0207658_10764168 3300025986 Bacteria 876
102 Ga0207639_11073753 3300026041 Bacteria 755
103 Ga0207674_10851470 3300026116 Unclassified 879
104 Ga0209974_10092411 3300027876 Bacteria 1050
105 Ga0268266_10017328 3300028379 Bacteria 6148
106 Ga0268266_10775325 3300028379 Unclassified 926
107 Ga0268266_11158284 3300028379 Bacteria 748
108 Ga0268265_10552141 3300028380 Bacteria 1094
109 Ga0265338_10004824 3300028800 Bacteria 18022
110 Ga0316182_1130547 3300030745 Bacteria 973
111 Ga0265327_10001222 3300031251 Bacteria 34564
112 Ga0307408_100018153 3300031548 Bacteria 4721
113 Ga0307408_100678987 3300031548 Bacteria 924
114 Ga0307508_10023815 3300031616 Bacteria 5559
115 Ga0316575_10034609 3300031665 Bacteria 1984
116 Ga0316579_10094950 3300031691 Bacteria 1425
117 Ga0316576_10001457 3300031727 Bacteria 12703
118 Ga0316578_10001014 3300031728 Bacteria 10763
119 Ga0316577_10181098 3300031733 Bacteria 1190
120 Ga0307413_10500988 3300031824 Bacteria 975
121 Ga0307413_11179547 3300031824 Unclassified 665
122 Ga0307410_11239088 3300031852 Unclassified 651
123 Ga0307410_11560102 3300031852 Bacteria 583
124 Ga0307407_10088798 3300031903 Unclassified 1889
125 Ga0307412_10072806 3300031911 Bacteria 2349
126 Ga0307412_11879435 3300031911 Unclassified 552
127 Ga0307416_100040900 3300032002 Bacteria 3606
128 Ga0307416_101256196 3300032002 Bacteria 846
129 Ga0316583_10002296 3300032133 Bacteria 6591
130 Ga0316585_10000576 3300032137 Bacteria 8970
131 Ga0316580_10004795 3300032139 Bacteria 3930
132 Ga0307510_10000965 3300033180 Bacteria 30459
133 Ga0373959_0030216 3300034820 Unclassified 1090
134 Ga0373926_0060992 3300035083 Bacteria 1375
135 Ga0316574_0001099 3300035398 Bacteria 12384
136 Ga0373935_0107164 3300035692 Bacteria 1850
137 Ga0373937_0875519 3300036401 Unclassified 847
138 Ga0316582_0000225 3300036647 Bacteria 18544
139 Ga0316582_0306640 3300036647 Bacteria 1091
140 Ga0316582_0806132 3300036647 Bacteria 643
141 Ga0316584_0000270 3300036712 Bacteria 26280
142 Ga0373925_0008518 3300037068 Bacteria 7472
143 Ga0395899_0023366 3300037312 Bacteria 4683
144 Ga0395900_0009078 3300037418 Bacteria 10191
145 Ga0395898_0025330 3300037466 Bacteria 5979
146 Ga0395901_0000661 3300038443 Bacteria 39682
147 Ga0400484_35392 3300038725 Bacteria 6185
148 Ga0439436_0014640 3300041404 Bacteria 2363
149 Ga0439436_0122317 3300041404 Bacteria 728
150 Ga0439438_023581 3300041405 Bacteria 1694
151 Ga0439439_0010157 3300041406 Bacteria 2248
152 Ga0439447_036724 3300041407 Bacteria 1209
153 Ga0439466_0058456 3300041411 Bacteria 1247
154 Ga0439466_0060302 3300041411 Bacteria 1223
155 Ga0439465_0010221 3300041413 Bacteria 2949
156 Ga0451843_1575966 3300041509 Bacteria 747
157 Ga0439431_0006852 3300041997 Bacteria 2530
158 Ga0439433_0000609 3300041999 Bacteria 6829
159 Ga0439442_008667 3300042002 Bacteria 2054
160 Ga0439432_000968 3300042006 Bacteria 10835
161 Ga0439449_0004082 3300042007 Bacteria 5652
162 Ga0439452_001708 3300042010 Bacteria 8627
163 Ga0439457_018697 3300042014 Bacteria 1539
164 Ga0439457_028981 3300042014 Bacteria 1226
165 Ga0439462_0109010 3300042015 Bacteria 766
166 Ga0450923_015664 3300042125 Bacteria 1421
167 Ga0450897_004897 3300042128 Bacteria 1141
168 Ga0450896_004711 3300042133 Bacteria 1852
169 Ga0450898_016101 3300042134 Bacteria 1273
170 Ga0450908_012837 3300042184 Bacteria 1515
171 Ga0439434_0010457 3300042435 Bacteria 2734
172 Ga0439434_0057519 3300042435 Bacteria 1212
173 Ga0450918_096142 3300042531 Bacteria 576
174 Ga0451577_0976734 3300042876 Unclassified 761
175 Ga0453684_1283535 3300044712 Bacteria 765
176 Ga0453684_1496718 3300044712 Bacteria 696
177 Ga0451576_0564882 3300045051 Bacteria 1195
178 Ga0451576_1191288 3300045051 Bacteria 796
179 Ga0495603_0743872 3300046455 Bacteria 560
180 Ga0495584_0000061 3300046491 Bacteria 78606
181 Ga0495594_0115213 3300046499 Bacteria 1517
182 Ga0495652_0090745 3300046529 Bacteria 2499
183 Ga0495652_0246941 3300046529 Bacteria 1325
184 Ga0495587_0153507 3300046536 Bacteria 1312
185 Ga0495656_0001679 3300046615 Bacteria 7245
186 Ga0495634_0702717 3300046642 Unclassified 581
187 Ga0495649_0087752 3300046694 Bacteria 1660
188 Ga0495636_0698125 3300047318 Unclassified 501
189 Ga0495687_008790 3300047443 Bacteria 5730
190 Ga0495686_0002413 3300047472 Bacteria 17723
191 Ga0496104_1763618 3300048907 Bacteria 521
192 Ga0496124_0297420 3300048927 Bacteria 1168
193 Ga0496125_0072230 3300048928 Bacteria 2690
194 Ga0501040_0226139 3300049576 Bacteria 1332
195 Ga0501040_0407023 3300049576 Bacteria 977
196 Ga0501041_0200138 3300049577 Bacteria 1252
197 Ga0501041_0701995 3300049577 Bacteria 647
198 Ga0501042_0081705 3300049578 Bacteria 2316
199 Ga0501046_0593212 3300049580 Bacteria 787
200 Ga0501046_0916415 3300049580 Bacteria 611
201 Ga0501067_0048896 3300049583 Bacteria 2344
202 Ga0501068_0069081 3300049584 Bacteria 2154
203 Ga0501070_0160300 3300049586 Bacteria 1855
204 Ga0501071_0052528 3300049587 Bacteria 2939
205 Ga0501072_0056950 3300049588 Bacteria 3080
206 Ga0501075_0204409 3300049591 Bacteria 1506
207 Ga0501076_0124523 3300049592 Bacteria 2088
208 Ga0501076_1668697 3300049592 Unclassified 523
209 Ga0501077_0000102 3300049593 Bacteria 44966
210 Ga0501077_1108620 3300049593 Bacteria 509
211 Ga0501080_0262374 3300049742 Bacteria 1573
212 Ga0501081_0079269 3300049743 Bacteria 2297
213 Ga0501081_0585033 3300049743 Bacteria 835
214 nmdc:mga03683_56693_c1 3300050489 Bacteria 1647
215 nmdc:mga03n38_150378_c1 3300050490 Bacteria 1171
216 nmdc:mga0k408_110242_c1 3300050493 Bacteria 1627
217 nmdc:mga07m45_445801_c1 3300050496 Bacteria 751
218 nmdc:mga07m45_8521_c1 3300050496 Bacteria 5276
219 nmdc:mga05p37_1474189_c1 3300050507 Bacteria 679
220 nmdc:mga05p37_74132_c1 3300050507 Bacteria 4189
221 nmdc:mga09592_633_c1 3300050508 Bacteria 26928
222 Ga0495619_0030430 3300053085 Bacteria 3495
223 Ga0495619_1108877 3300053085 Unclassified 526
224 Ga0500608_019637 3300053122 Bacteria 3102
225 Ga0501084_0078813 3300054114 Bacteria 2761
226 Ga0501084_0173871 3300054114 Bacteria 1818
227 Ga0501084_0746129 3300054114 Bacteria 825
228 Ga0590075_183590 3300059424 Bacteria 553
229 Ga0501082_0000128 3300060353 Bacteria 61551
230 Ga0501082_0359995 3300060353 Bacteria 1269
231 Ga0501082_1039733 3300060353 Bacteria 716
232 Ga0530510_0025680 3300061734 Bacteria 4213
233 2599905180 2599185292 Bacteria 6290804
234 2643858610 2643221569 Bacteria 6064337
235 2643982347 2643221594 Bacteria 5811388
236 2644120869 2643221621 Bacteria 6212786
237 2809034457 2808606395 Bacteria 6020352
238 2831430587 2831426010 Bacteria 8662725
239 2848695432 2848694841 Bacteria 9205737
240 2885193920 2885192300 Bacteria 5882526
241 Ga0501033_1051335
242 rootH2_10077974
243 Ga0055536_1073869
244 Ga0055530_10082170
245 Ga0065704_10080955
246 Ga0065707_10088128
247 Ga0065707_10136455
248 Ga0070690_101671108
249 Ga0070682_100150414
250 Ga0070682_101787080
251 Ga0070674_100170394
252 Ga0070673_100232934
253 Ga0070667_100984711
254 Ga0070714_101238442
255 Ga0070705_100369943
256 Ga0070708_100528929
257 Ga0070708_101170956
258 Ga0070681_11114991
259 Ga0070706_100000054
260 Ga0070706_100001593
261 Ga0070707_100013888
262 Ga0070707_100383489
263 Ga0070707_100446990
264 Ga0070698_100067512
265 Ga0070699_100290033
266 Ga0070699_100870834
267 Ga0070697_100000013
268 Ga0070697_100000140
269 Ga0068853_100556556
270 Ga0070672_100678090
271 Ga0070693_100443503
272 Ga0070665_100007361
273 Ga0070665_100432850
274 Ga0070665_100583063
275 Ga0070665_101257692
276 Ga0070665_101731038
277 Ga0068855_100417103
278 Ga0070664_101297716
279 Ga0068857_102064243
280 Ga0068856_100111026
281 Ga0081455_10108237
282 Ga0081539_10031820
283 Ga0070717_10000134
284 Ga0070717_10483070
285 Ga0075363_100023051
286 Ga0075362_10096916
287 Ga0075367_10026169
288 Ga0075366_10041900
289 Ga0075370_10006811
290 Ga0075370_10854207
291 Ga0075430_100529052
292 Ga0075430_100780739
293 Ga0075431_100697283
294 Ga0075429_100070866
295 Ga0075436_100481585
296 Ga0105240_10011296
297 Ga0105240_10061889
298 Ga0105240_10727530
299 Ga0105240_11399298
300 Ga0114129_10000752
301 Ga0105241_10161045
302 Ga0105248_10112572
303 Ga0105248_12035586
304 Ga0105237_10001683
305 Ga0105237_10019120
306 Ga0105238_10182361
307 Ga0105249_11102984
308 Ga0105249_12644492
309 Ga0105239_10002819
310 Ga0105239_10062614
311 Ga0105239_13445646
312 Ga0157370_10014885
313 Ga0163162_10013307
314 Ga0163163_11878331
315 Ga0157380_10058269
316 Ga0157379_10976071
317 Ga0209148_1026901
318 Ga0209676_1045464
319 Ga0209050_1005151
320 Ga0207684_10000047
321 Ga0207684_10001536
322 Ga0207684_10329987
323 Ga0207654_10127024
324 Ga0207707_11209030
325 Ga0207695_10028305
326 Ga0207695_10071126
327 Ga0207695_10292380
328 Ga0207671_10006284
329 Ga0207671_10185496
330 Ga0207646_10025347
331 Ga0207646_10061808
332 Ga0207646_10390297
333 Ga0207694_10083657
334 Ga0207700_10541433
335 Ga0207669_10131813
336 Ga0207711_10143612
337 Ga0207667_11523728
338 Ga0207651_10190059
339 Ga0207712_11290933
340 Ga0207668_10000267
341 Ga0207658_10764168
342 Ga0207639_11073753
343 Ga0207674_10851470
344 Ga0209974_10092411
345 Ga0268266_10017328
346 Ga0268266_10775325
347 Ga0268266_11158284
348 Ga0268265_10552141
349 Ga0265338_10004824
350 Ga0316182_1130547
351 Ga0265327_10001222
352 Ga0307408_100018153
353 Ga0307408_100678987
354 Ga0307508_10023815
355 Ga0316575_10034609
356 Ga0316579_10094950
357 Ga0316576_10001457
358 Ga0316578_10001014
359 Ga0316577_10181098
360 Ga0307413_10500988
361 Ga0307413_11179547
362 Ga0307410_11239088
363 Ga0307410_11560102
364 Ga0307407_10088798
365 Ga0307412_10072806
366 Ga0307412_11879435
367 Ga0307416_100040900
368 Ga0307416_101256196
369 Ga0316583_10002296
370 Ga0316585_10000576
371 Ga0316580_10004795
372 Ga0307510_10000965
373 Ga0373959_0030216
374 Ga0373926_0060992
375 Ga0316574_0001099
376 Ga0373935_0107164
377 Ga0373937_0875519
378 Ga0316582_0000225
379 Ga0316582_0306640
380 Ga0316582_0806132
381 Ga0316584_0000270
382 Ga0373925_0008518
383 Ga0395899_0023366
384 Ga0395900_0009078
385 Ga0395898_0025330
386 Ga0395901_0000661
387 Ga0400484_35392
388 Ga0439436_0014640
389 Ga0439436_0122317
390 Ga0439438_023581
391 Ga0439439_0010157
392 Ga0439447_036724
393 Ga0439466_0058456
394 Ga0439466_0060302
395 Ga0439465_0010221
396 Ga0451843_1575966
397 Ga0439431_0006852
398 Ga0439433_0000609
399 Ga0439442_008667
400 Ga0439432_000968
401 Ga0439449_0004082
402 Ga0439452_001708
403 Ga0439457_018697
404 Ga0439457_028981
405 Ga0439462_0109010
406 Ga0450923_015664
407 Ga0450897_004897
408 Ga0450896_004711
409 Ga0450898_016101
410 Ga0450908_012837
411 Ga0439434_0010457
412 Ga0439434_0057519
413 Ga0450918_096142
414 Ga0451577_0976734
415 Ga0453684_1283535
416 Ga0453684_1496718
417 Ga0451576_0564882
418 Ga0451576_1191288
419 Ga0495603_0743872
420 Ga0495584_0000061
421 Ga0495594_0115213
422 Ga0495652_0090745
423 Ga0495652_0246941
424 Ga0495587_0153507
425 Ga0495656_0001679
426 Ga0495634_0702717
427 Ga0495649_0087752
428 Ga0495636_0698125
429 Ga0495687_008790
430 Ga0495686_0002413
431 Ga0496104_1763618
432 Ga0496124_0297420
433 Ga0496125_0072230
434 Ga0501040_0226139
435 Ga0501040_0407023
436 Ga0501041_0200138
437 Ga0501041_0701995
438 Ga0501042_0081705
439 Ga0501046_0593212
440 Ga0501046_0916415
441 Ga0501067_0048896
442 Ga0501068_0069081
443 Ga0501070_0160300
444 Ga0501071_0052528
445 Ga0501072_0056950
446 Ga0501075_0204409
447 Ga0501076_0124523
448 Ga0501076_1668697
449 Ga0501077_0000102
450 Ga0501077_1108620
451 Ga0501080_0262374
452 Ga0501081_0079269
453 Ga0501081_0585033
454 nmdc:mga03683_56693_c1
455 nmdc:mga03n38_150378_c1
456 nmdc:mga0k408_110242_c1
457 nmdc:mga07m45_445801_c1
458 nmdc:mga07m45_8521_c1
459 nmdc:mga05p37_1474189_c1
460 nmdc:mga05p37_74132_c1
461 nmdc:mga09592_633_c1
462 Ga0495619_0030430
463 Ga0495619_1108877
464 Ga0500608_019637
465 Ga0501084_0078813
466 Ga0501084_0173871
467 Ga0501084_0746129
468 Ga0590075_183590
469 Ga0501082_0000128
470 Ga0501082_0359995
471 Ga0501082_1039733
472 Ga0530510_0025680
473 2599905180
474 2643858610
475 2643982347
476 2644120869
477 2809034457
478 2831430587
479 2848695432
480 2885193920

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04965

GPW_gp25

Baseplate wedge protein gp25

38

128

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ia7-assembly1.cif.gz_A crystal structure of putative tail lysozyme (np_952040.1) from geobacter sulfurreducens at 1.44 a resolution 0.856 20 121
1ni9-assembly1.cif.gz_A 2.0 a structure of glycerol metabolism protein from e. coli 0.8517 89 121
6enu-assembly1.cif.gz_w polyproline-stalled ribosome in the presence of elongation-factor p (ef-p) 0.8425 83 116
3sr9-assembly1.cif.gz_A crystal structure of mouse ptpsigma 0.8347 85 120
6kr4-assembly4.cif.gz_D crystal structure of the liprin-alpha3_sam123/lar_d1d2 complex 0.8321 85 120
ID Description Score Start End Superfamily
af_P06864_732_1002_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9548 83 105 2.70.98.10
af_A0A0P0V197_32_95_3.10.450.700 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.9295 82 119 3.10.450.700
af_A0A1D6L8D5_102_153_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.8919 83 117 2.30.30.30
af_Q9NEW7_1_162_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8819 84 119 2.130.10.10
af_Q10RD3_16_333_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.8667 83 119 2.120.10.80
ID Description Score Start End GO Terms
AF-A0A1P8YPY5-F1-model_v4 Lysozyme family protein 0.9696 23 119
AF-A0A0C2D3V1-F1-model_v4 Uncharacterized protein 0.9564 71 119
AF-A0A7V4G7W4-F1-model_v4 IraD/Gp25-like domain-containing protein 0.9499 25 119
AF-A0A1Y4R5C9-F1-model_v4 Lipoprotein 0.928 83 121
AF-A0A5B7JGF0-F1-model_v4 Uncharacterized protein 0.927 83 121

Map