F353132

General Info

Members Datasets Scaffolds Average Seq Length
240 160 480 198

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0000254|Ga0466967_0000254_13429_14097
Length 222
Sequence MVPSTRVERASAFKYQLQITQLQIVMSRFAEPMARLIEELKKLPGIGTKTAQRLAFHILRSPDEDAEALAAAVRDVKANLRLCSVCHNITDVDPCVYCSNPSRNPRLICVVEEPTNIATIERTQQFNGLYHVLHGAISPLHGVGPEHLRISTLQHRADDADEIILATNPTVEGEATATYIVNLLKRSGLKITRIATGIPAGADIEYADEVTMSKAMEGRREL

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
66 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
118 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
127 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
128 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
129 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.83
Nodule 0
Rhizoplane 0.83
Rhizosphere 88.33
Stem 0
Stem Tuber 0
Unclassified 10.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0000254 3300045976 Bacteria 23430
2 rootL2_10125722 3300003322 Bacteria 4514
3 rootH1_10267779 3300003323 Bacteria 1840
4 Ga0065715_10406368 3300005293 Bacteria 875
5 Ga0070658_10009059 3300005327 Bacteria 8006
6 Ga0070683_100543453 3300005329 Unclassified 1111
7 Ga0068869_100520975 3300005334 Bacteria 995
8 Ga0070680_100542267 3300005336 Unclassified 997
9 Ga0070682_100513834 3300005337 Bacteria 930
10 Ga0070660_100007116 3300005339 Bacteria 7777
11 Ga0070660_100015095 3300005339 Bacteria 5574
12 Ga0070714_100099119 3300005435 Bacteria 2564
13 Ga0070713_100285121 3300005436 Bacteria 1516
14 Ga0070713_100922820 3300005436 Bacteria 840
15 Ga0070708_100096264 3300005445 Bacteria 2704
16 Ga0070663_100036848 3300005455 Bacteria 3400
17 Ga0070681_10413191 3300005458 Bacteria 1261
18 Ga0068867_100286382 3300005459 Unclassified 1353
19 Ga0070706_100086382 3300005467 Bacteria 2907
20 Ga0070706_100486626 3300005467 Bacteria 1148
21 Ga0070707_100423910 3300005468 Bacteria 1291
22 Ga0070699_100214799 3300005518 Bacteria 1713
23 Ga0070679_100009934 3300005530 Bacteria 9009
24 Ga0070679_100027033 3300005530 Bacteria 5642
25 Ga0070679_100144015 3300005530 Bacteria 2361
26 Ga0070679_100718382 3300005530 Bacteria 942
27 Ga0070684_100003549 3300005535 Bacteria 11725
28 Ga0070695_100223042 3300005545 Bacteria 1359
29 Ga0070665_100057329 3300005548 Bacteria 3905
30 Ga0070665_100096158 3300005548 Bacteria 2967
31 Ga0068855_100056756 3300005563 Bacteria 4592
32 Ga0068857_100196979 3300005577 Unclassified 1836
33 Ga0068856_100020539 3300005614 Bacteria 6414
34 Ga0068858_100818231 3300005842 Bacteria 909
35 Ga0070717_10002642 3300006028 Bacteria 12624
36 Ga0070717_10330671 3300006028 Bacteria 1359
37 Ga0075433_10438470 3300006852 Bacteria 1151
38 Ga0105240_10152519 3300009093 Bacteria 2751
39 Ga0105240_10611095 3300009093 Unclassified 1199
40 Ga0114129_10099632 3300009147 Bacteria 4022
41 Ga0105248_10229419 3300009177 Bacteria 2090
42 Ga0105237_10290152 3300009545 Bacteria 1639
43 Ga0105238_10057556 3300009551 Bacteria 3897
44 Ga0105238_10118788 3300009551 Bacteria 2624
45 Ga0157371_10078934 3300013102 Bacteria 2332
46 Ga0157370_10116065 3300013104 Bacteria 2501
47 Ga0157370_10844255 3300013104 Bacteria 832
48 Ga0157369_10002412 3300013105 Bacteria 22451
49 Ga0157369_10008610 3300013105 Bacteria 11697
50 Ga0157369_10231278 3300013105 Bacteria 1933
51 Ga0157369_11613406 3300013105 Bacteria 659
52 Ga0157374_10014399 3300013296 Bacteria 6922
53 Ga0157374_10041598 3300013296 Bacteria 4236
54 Ga0157372_10001208 3300013307 Bacteria 27938
55 Ga0157379_10121054 3300014968 Bacteria 2354
56 Ga0213874_10001733 3300021377 Bacteria 4578
57 Ga0213874_10076104 3300021377 Bacteria 1079
58 Ga0213876_10003328 3300021384 Bacteria 9211
59 Ga0213875_10000006 3300021388 Bacteria 579005
60 Ga0213875_10000032 3300021388 Bacteria 172918
61 Ga0213875_10003231 3300021388 Bacteria 9357
62 Ga0213875_10015687 3300021388 Bacteria 3685
63 Ga0213875_10062124 3300021388 Bacteria 1747
64 Ga0213875_10174328 3300021388 Bacteria 1010
65 Ga0209233_1003256 3300025261 Bacteria 5758
66 Ga0209233_1014840 3300025261 Bacteria 2184
67 Ga0207647_10057732 3300025904 Bacteria 2379
68 Ga0207705_10040752 3300025909 Bacteria 3332
69 Ga0207684_10563842 3300025910 Bacteria 974
70 Ga0207707_10204763 3300025912 Unclassified 1720
71 Ga0207671_10384016 3300025914 Bacteria 1116
72 Ga0207693_10615989 3300025915 Unclassified 844
73 Ga0207660_10023391 3300025917 Bacteria 4173
74 Ga0207660_10373402 3300025917 Bacteria 1145
75 Ga0207657_10007585 3300025919 Bacteria 11117
76 Ga0207652_10006097 3300025921 Bacteria 9753
77 Ga0207652_10277877 3300025921 Bacteria 1511
78 Ga0207646_10241226 3300025922 Bacteria 1633
79 Ga0207694_10002111 3300025924 Bacteria 16387
80 Ga0207661_10232009 3300025944 Unclassified 1635
81 Ga0207667_10000199 3300025949 Bacteria 87200
82 Ga0207702_10058970 3300026078 Bacteria 3268
83 Ga0207702_10640984 3300026078 Bacteria 1044
84 Ga0207674_10266312 3300026116 Unclassified 1661
85 Ga0268266_10375506 3300028379 Bacteria 1340
86 Ga0265318_10051713 3300028577 Bacteria 1542
87 Ga0265336_10009419 3300028666 Bacteria 3381
88 Ga0265338_10001153 3300028800 Bacteria 43711
89 Ga0265338_10027535 3300028800 Bacteria 5700
90 Ga0265338_10185159 3300028800 Bacteria 1583
91 Ga0265760_10062232 3300031090 Unclassified 1135
92 Ga0265330_10039462 3300031235 Bacteria 2097
93 Ga0265330_10235948 3300031235 Bacteria 771
94 Ga0265328_10125115 3300031239 Unclassified 960
95 Ga0265328_10191382 3300031239 Unclassified 775
96 Ga0265320_10032082 3300031240 Bacteria 2693
97 Ga0265320_10072219 3300031240 Bacteria 1624
98 Ga0265325_10010506 3300031241 Bacteria 5356
99 Ga0265325_10045190 3300031241 Bacteria 2289
100 Ga0265325_10061124 3300031241 Unclassified 1911
101 Ga0265325_10071622 3300031241 Bacteria 1739
102 Ga0265325_10134161 3300031241 Bacteria 1183
103 Ga0265340_10006216 3300031247 Bacteria 6582
104 Ga0265340_10034964 3300031247 Bacteria 2497
105 Ga0265340_10164512 3300031247 Unclassified 1007
106 Ga0265340_10220129 3300031247 Unclassified 850
107 Ga0265339_10000041 3300031249 Bacteria 119820
108 Ga0265339_10015971 3300031249 Bacteria 4487
109 Ga0265339_10025877 3300031249 Bacteria 3363
110 Ga0265339_10047270 3300031249 Unclassified 2363
111 Ga0265339_10202892 3300031249 Bacteria 977
112 Ga0265316_10028057 3300031344 Bacteria 4648
113 Ga0307408_100112167 3300031548 Bacteria 2096
114 Ga0265313_10006754 3300031595 Bacteria 8025
115 Ga0265313_10017356 3300031595 Bacteria 4093
116 Ga0265314_10002442 3300031711 Bacteria 19040
117 Ga0265342_10001067 3300031712 Bacteria 26609
118 Ga0265342_10091705 3300031712 Unclassified 1740
119 Ga0265342_10129957 3300031712 Bacteria 1412
120 Ga0265342_10160974 3300031712 Unclassified 1240
121 Ga0307405_10037701 3300031731 Bacteria 2907
122 Ga0307413_10020712 3300031824 Bacteria 3505
123 Ga0307413_10046779 3300031824 Bacteria 2576
124 Ga0307413_10417206 3300031824 Bacteria 1056
125 Ga0307410_10030050 3300031852 Bacteria 3468
126 Ga0307410_10042885 3300031852 Bacteria 2993
127 Ga0307410_10153576 3300031852 Bacteria 1716
128 Ga0307410_10508726 3300031852 Bacteria 992
129 Ga0307406_10094905 3300031901 Bacteria 2017
130 Ga0307407_10060952 3300031903 Bacteria 2203
131 Ga0307412_10108866 3300031911 Bacteria 1974
132 Ga0307412_10940069 3300031911 Bacteria 760
133 Ga0307409_100086529 3300031995 Bacteria 2551
134 Ga0307409_100101493 3300031995 Bacteria 2388
135 Ga0307409_100211952 3300031995 Bacteria 1741
136 Ga0307416_101275221 3300032002 Bacteria 840
137 Ga0307414_10077848 3300032004 Bacteria 2415
138 Ga0307414_10400370 3300032004 Bacteria 1192
139 Ga0307414_10732810 3300032004 Bacteria 897
140 Ga0307411_10003835 3300032005 Bacteria 7076
141 Ga0307411_10531583 3300032005 Bacteria 1000
142 Ga0307415_100090729 3300032126 Bacteria 2211
143 Ga0373934_0005001 3300035086 Bacteria 4917
144 Ga0373954_0002811 3300035118 Bacteria 7327
145 Ga0373956_0147984 3300035119 Bacteria 1104
146 Ga0373955_0053929 3300035172 Bacteria 2197
147 Ga0373935_0016843 3300035692 Bacteria 4425
148 Ga0373927_0001412 3300035695 Bacteria 18119
149 Ga0373933_0063347 3300035724 Bacteria 2235
150 Ga0373947_0025602 3300035725 Bacteria 3442
151 Ga0373937_0002349 3300036401 Bacteria 15773
152 Ga0373937_0381541 3300036401 Unclassified 1337
153 Ga0373925_0025073 3300037068 Bacteria 4355
154 Ga0395900_0232868 3300037418 Bacteria 1852
155 Ga0436364_0229975 3300037853 Bacteria 5848
156 Ga0436364_0262761 3300037853 Bacteria 1716
157 Ga0436364_0403604 3300037853 Bacteria 63400
158 Ga0436364_0478514 3300037853 Bacteria 578677
159 Ga0436364_0734554 3300037853 Bacteria 2620
160 Ga0436364_1105375 3300037853 Bacteria 139847
161 Ga0436365_1931431 3300039437 Bacteria 2745
162 Ga0436360_0875075 3300039438 Bacteria 5422
163 Ga0436361_0583756 3300039447 Unclassified 1024
164 Ga0436363_0045959 3300039450 Bacteria 2206
165 Ga0436363_0258129 3300039450 Bacteria 1218
166 Ga0436363_0281991 3300039450 Bacteria 3746
167 Ga0436363_0622206 3300039450 Bacteria 1137
168 Ga0436362_0195703 3300039453 Bacteria 4763
169 Ga0451853_3954198 3300041512 Unclassified 642
170 Ga0451577_0184022 3300042876 Bacteria 1884
171 Ga0466966_0116690 3300044684 Bacteria 1643
172 Ga0466963_0012998 3300044694 Bacteria 5103
173 Ga0466963_0190763 3300044694 Bacteria 1432
174 Ga0466971_0213215 3300044719 Unclassified 914
175 Ga0466957_0442436 3300044842 Bacteria 895
176 Ga0466959_0080547 3300045049 Bacteria 2347
177 Ga0466959_0200230 3300045049 Bacteria 1391
178 Ga0466959_0318226 3300045049 Bacteria 1064
179 Ga0466959_0618581 3300045049 Bacteria 728
180 Ga0495651_0113798 3300046462 Bacteria 1997
181 Ga0495580_0000423 3300046472 Bacteria 35086
182 Ga0495628_0699673 3300046516 Unclassified 716
183 Ga0495665_0054103 3300046531 Bacteria 2121
184 Ga0495609_0059957 3300046538 Bacteria 1683
185 Ga0495667_0077184 3300046559 Bacteria 2167
186 Ga0495669_0083945 3300046684 Bacteria 1464
187 Ga0495649_0009392 3300046694 Bacteria 5820
188 Ga0495674_0516037 3300047319 Bacteria 954
189 Ga0495677_0078738 3300047445 Bacteria 1234
190 Ga0495684_0003985 3300047471 Bacteria 11517
191 Ga0495686_0000093 3300047472 Bacteria 188735
192 Ga0495686_0002010 3300047472 Bacteria 20114
193 Ga0495686_0143560 3300047472 Bacteria 1407
194 Ga0495602_0116630 3300048088 Bacteria 2157
195 Ga0495602_0497535 3300048088 Unclassified 853
196 Ga0496104_0000049 3300048907 Bacteria 144754
197 Ga0496104_0700725 3300048907 Unclassified 920
198 Ga0496126_0000110 3300048929 Bacteria 196225
199 Ga0495682_0069154 3300049460 Bacteria 1271
200 Ga0501296_028211 3300049519 Bacteria 746
201 Ga0501298_046727 3300049521 Bacteria 889
202 Ga0501303_005759 3300049526 Bacteria 1065
203 Ga0501031_0004982 3300049568 Bacteria 8634
204 Ga0501032_0000487 3300049569 Bacteria 32230
205 Ga0501033_0030082 3300049570 Bacteria 4080
206 Ga0501034_0009819 3300049571 Bacteria 10007
207 Ga0501034_0078250 3300049571 Bacteria 3312
208 Ga0501036_0001161 3300049572 Bacteria 20016
209 Ga0501037_0002899 3300049573 Bacteria 12439
210 Ga0501038_0003330 3300049574 Bacteria 14988
211 Ga0501039_0004802 3300049575 Bacteria 10235
212 Ga0501042_0111097 3300049578 Bacteria 1973
213 Ga0501043_0002231 3300049579 Bacteria 16502
214 Ga0501046_0003849 3300049580 Bacteria 13735
215 Ga0501048_0006421 3300049582 Bacteria 8935
216 Ga0501068_0006777 3300049584 Bacteria 6330
217 Ga0501069_0009002 3300049585 Bacteria 5268
218 Ga0501072_0000504 3300049588 Bacteria 28106
219 Ga0501073_0000638 3300049589 Bacteria 24591
220 Ga0501074_0001339 3300049590 Bacteria 16344
221 Ga0501076_0045072 3300049592 Bacteria 3480
222 Ga0501249_087088 3300049679 Unclassified 738
223 Ga0501079_0008663 3300049741 Bacteria 7714
224 Ga0501080_0041181 3300049742 Bacteria 4305
225 Ga0501035_0027016 3300049822 Bacteria 5248
226 Ga0501044_0047520 3300049823 Bacteria 4438
227 nmdc:mga08y16_706685_c1 3300050511 Bacteria 1007
228 Ga0501084_0006155 3300054114 Bacteria 9866
229 Ga0590071_000119 3300059421 Bacteria 21957
230 Ga0590071_003800 3300059421 Bacteria 3707
231 Ga0590071_045815 3300059421 Bacteria 1056
232 Ga0590074_000082 3300059423 Bacteria 10219
233 Ga0590074_047568 3300059423 Bacteria 780
234 Ga0590075_000216 3300059424 Bacteria 16123
235 Ga0590075_001109 3300059424 Bacteria 6910
236 Ga0590077_000315 3300059426 Bacteria 13671
237 Ga0590077_000518 3300059426 Bacteria 10686
238 Ga0590077_030411 3300059426 Bacteria 1177
239 Ga0501082_0042489 3300060353 Bacteria 3919
240 Ga0466962_0082926 3300061719 Bacteria 1534
241 Ga0466967_0000254
242 rootL2_10125722
243 rootH1_10267779
244 Ga0065715_10406368
245 Ga0070658_10009059
246 Ga0070683_100543453
247 Ga0068869_100520975
248 Ga0070680_100542267
249 Ga0070682_100513834
250 Ga0070660_100007116
251 Ga0070660_100015095
252 Ga0070714_100099119
253 Ga0070713_100285121
254 Ga0070713_100922820
255 Ga0070708_100096264
256 Ga0070663_100036848
257 Ga0070681_10413191
258 Ga0068867_100286382
259 Ga0070706_100086382
260 Ga0070706_100486626
261 Ga0070707_100423910
262 Ga0070699_100214799
263 Ga0070679_100009934
264 Ga0070679_100027033
265 Ga0070679_100144015
266 Ga0070679_100718382
267 Ga0070684_100003549
268 Ga0070695_100223042
269 Ga0070665_100057329
270 Ga0070665_100096158
271 Ga0068855_100056756
272 Ga0068857_100196979
273 Ga0068856_100020539
274 Ga0068858_100818231
275 Ga0070717_10002642
276 Ga0070717_10330671
277 Ga0075433_10438470
278 Ga0105240_10152519
279 Ga0105240_10611095
280 Ga0114129_10099632
281 Ga0105248_10229419
282 Ga0105237_10290152
283 Ga0105238_10057556
284 Ga0105238_10118788
285 Ga0157371_10078934
286 Ga0157370_10116065
287 Ga0157370_10844255
288 Ga0157369_10002412
289 Ga0157369_10008610
290 Ga0157369_10231278
291 Ga0157369_11613406
292 Ga0157374_10014399
293 Ga0157374_10041598
294 Ga0157372_10001208
295 Ga0157379_10121054
296 Ga0213874_10001733
297 Ga0213874_10076104
298 Ga0213876_10003328
299 Ga0213875_10000006
300 Ga0213875_10000032
301 Ga0213875_10003231
302 Ga0213875_10015687
303 Ga0213875_10062124
304 Ga0213875_10174328
305 Ga0209233_1003256
306 Ga0209233_1014840
307 Ga0207647_10057732
308 Ga0207705_10040752
309 Ga0207684_10563842
310 Ga0207707_10204763
311 Ga0207671_10384016
312 Ga0207693_10615989
313 Ga0207660_10023391
314 Ga0207660_10373402
315 Ga0207657_10007585
316 Ga0207652_10006097
317 Ga0207652_10277877
318 Ga0207646_10241226
319 Ga0207694_10002111
320 Ga0207661_10232009
321 Ga0207667_10000199
322 Ga0207702_10058970
323 Ga0207702_10640984
324 Ga0207674_10266312
325 Ga0268266_10375506
326 Ga0265318_10051713
327 Ga0265336_10009419
328 Ga0265338_10001153
329 Ga0265338_10027535
330 Ga0265338_10185159
331 Ga0265760_10062232
332 Ga0265330_10039462
333 Ga0265330_10235948
334 Ga0265328_10125115
335 Ga0265328_10191382
336 Ga0265320_10032082
337 Ga0265320_10072219
338 Ga0265325_10010506
339 Ga0265325_10045190
340 Ga0265325_10061124
341 Ga0265325_10071622
342 Ga0265325_10134161
343 Ga0265340_10006216
344 Ga0265340_10034964
345 Ga0265340_10164512
346 Ga0265340_10220129
347 Ga0265339_10000041
348 Ga0265339_10015971
349 Ga0265339_10025877
350 Ga0265339_10047270
351 Ga0265339_10202892
352 Ga0265316_10028057
353 Ga0307408_100112167
354 Ga0265313_10006754
355 Ga0265313_10017356
356 Ga0265314_10002442
357 Ga0265342_10001067
358 Ga0265342_10091705
359 Ga0265342_10129957
360 Ga0265342_10160974
361 Ga0307405_10037701
362 Ga0307413_10020712
363 Ga0307413_10046779
364 Ga0307413_10417206
365 Ga0307410_10030050
366 Ga0307410_10042885
367 Ga0307410_10153576
368 Ga0307410_10508726
369 Ga0307406_10094905
370 Ga0307407_10060952
371 Ga0307412_10108866
372 Ga0307412_10940069
373 Ga0307409_100086529
374 Ga0307409_100101493
375 Ga0307409_100211952
376 Ga0307416_101275221
377 Ga0307414_10077848
378 Ga0307414_10400370
379 Ga0307414_10732810
380 Ga0307411_10003835
381 Ga0307411_10531583
382 Ga0307415_100090729
383 Ga0373934_0005001
384 Ga0373954_0002811
385 Ga0373956_0147984
386 Ga0373955_0053929
387 Ga0373935_0016843
388 Ga0373927_0001412
389 Ga0373933_0063347
390 Ga0373947_0025602
391 Ga0373937_0002349
392 Ga0373937_0381541
393 Ga0373925_0025073
394 Ga0395900_0232868
395 Ga0436364_0229975
396 Ga0436364_0262761
397 Ga0436364_0403604
398 Ga0436364_0478514
399 Ga0436364_0734554
400 Ga0436364_1105375
401 Ga0436365_1931431
402 Ga0436360_0875075
403 Ga0436361_0583756
404 Ga0436363_0045959
405 Ga0436363_0258129
406 Ga0436363_0281991
407 Ga0436363_0622206
408 Ga0436362_0195703
409 Ga0451853_3954198
410 Ga0451577_0184022
411 Ga0466966_0116690
412 Ga0466963_0012998
413 Ga0466963_0190763
414 Ga0466971_0213215
415 Ga0466957_0442436
416 Ga0466959_0080547
417 Ga0466959_0200230
418 Ga0466959_0318226
419 Ga0466959_0618581
420 Ga0495651_0113798
421 Ga0495580_0000423
422 Ga0495628_0699673
423 Ga0495665_0054103
424 Ga0495609_0059957
425 Ga0495667_0077184
426 Ga0495669_0083945
427 Ga0495649_0009392
428 Ga0495674_0516037
429 Ga0495677_0078738
430 Ga0495684_0003985
431 Ga0495686_0000093
432 Ga0495686_0002010
433 Ga0495686_0143560
434 Ga0495602_0116630
435 Ga0495602_0497535
436 Ga0496104_0000049
437 Ga0496104_0700725
438 Ga0496126_0000110
439 Ga0495682_0069154
440 Ga0501296_028211
441 Ga0501298_046727
442 Ga0501303_005759
443 Ga0501031_0004982
444 Ga0501032_0000487
445 Ga0501033_0030082
446 Ga0501034_0009819
447 Ga0501034_0078250
448 Ga0501036_0001161
449 Ga0501037_0002899
450 Ga0501038_0003330
451 Ga0501039_0004802
452 Ga0501042_0111097
453 Ga0501043_0002231
454 Ga0501046_0003849
455 Ga0501048_0006421
456 Ga0501068_0006777
457 Ga0501069_0009002
458 Ga0501072_0000504
459 Ga0501073_0000638
460 Ga0501074_0001339
461 Ga0501076_0045072
462 Ga0501249_087088
463 Ga0501079_0008663
464 Ga0501080_0041181
465 Ga0501035_0027016
466 Ga0501044_0047520
467 nmdc:mga08y16_706685_c1
468 Ga0501084_0006155
469 Ga0590071_000119
470 Ga0590071_003800
471 Ga0590071_045815
472 Ga0590074_000082
473 Ga0590074_047568
474 Ga0590075_000216
475 Ga0590075_001109
476 Ga0590077_000315
477 Ga0590077_000518
478 Ga0590077_030411
479 Ga0501082_0042489
480 Ga0466962_0082926

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21175

RecR_C

RecR, C-terminal

197

220

0.99

PF13662

Toprim_4

Toprim domain

106

195

0.97

PF02132

RecR_ZnF

RecR, Cys4-zinc finger motif

80

100

0.95

PF21176

RecR_HhH

RecR, helix-hairpin-helix

33

77

0.95

PF01751

Toprim

Toprim domain

107

195

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a93-assembly1.cif.gz_F complex of recf-recr-dna from thermus thermophilus. 0.9188 82 177
8a93-assembly1.cif.gz_F complex of recf-recr-dna from thermus thermophilus. 0.8996 82 177
3ve5-assembly1.cif.gz_A structure of recombination mediator protein recr16-196 deletion mutant 0.8198 19 199
3ve5-assembly1.cif.gz_A structure of recombination mediator protein recr16-196 deletion mutant 0.8157 19 199
1t6t-assembly1.cif.gz_1 putative protein from aquifex aeolicus 0.7694 81 161
ID Description Score Start End Superfamily
1jn3A01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9901 6 32 1.10.150.20
3vdpC01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.9789 4 53 1.10.8.420
3vdpA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.9725 4 53 1.10.8.420
3vdpB01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.962 5 53 1.10.8.420
3vduA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.9614 4 53 1.10.8.420
ID Description Score Start End GO Terms
AF-A0A3D0TKE5-F1-model_v4 Recombination protein RecR 0.9279 55 174 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-W1XYN8-F1-model_v4 Recombination protein RecR 0.8943 40 151 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A3C0TT44-F1-model_v4 Recombination protein RecR 0.8889 47 179 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A3D0TKE5-F1-model_v4 Recombination protein RecR 0.8853 55 174 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-W1XYN8-F1-model_v4 Recombination protein RecR 0.866 40 151 GO:0003677
GO:0006281
GO:0006310
GO:0046872

Map