F352143

General Info

Members Datasets Scaffolds Average Seq Length
239 168 226 199

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0463062|Ga0436361_0463062_402_1106
Length 234
Sequence MAARCVASFAKASSLGCNRRLSCRHFRLRADDKGHKKSRLDMSEQDPFELFGQWLAEAEKSEPNDPNAMSLATVDADGRPSLRMVLLKGFDAAGFVFYTNLESKKGRDLAVNRHAAICLHWKSLRRQIRVEGATEAVTPEEADAYFASRARGSQIGAWASAQSRPLTGRFELERKVGEYTAKFGLSSIPRPPHWSGFRLVPERIEFWQDRPFRLHDRLVYNRDGAGWTTERLFP

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
3 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
4 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
5 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
6 2643221591 Devosia sp. Root685 Isolate Unclassified
7 2643221674 Devosia sp. Root436 Isolate Unclassified
8 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
9 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
10 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
11 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
12 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
13 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
14 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
102 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
103 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
167 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.56
Metatranscriptomes 0
Isolates 5.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.84
Nodule 0.42
Rhizoplane 7.53
Rhizosphere 85.36
Stem 0
Stem Tuber 0
Unclassified 5.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_2349244 2162886012 Bacteria 2710
2 Ga0070658_10042368 3300005327 Bacteria 3677
3 Ga0070658_10243438 3300005327 Bacteria 1525
4 Ga0070683_100401290 3300005329 Bacteria 1307
5 Ga0070670_100004948 3300005331 Bacteria 11212
6 Ga0070666_10079334 3300005335 Bacteria 2242
7 Ga0070660_100009620 3300005339 Bacteria 6809
8 Ga0070661_100020032 3300005344 Bacteria 4769
9 Ga0070661_100078825 3300005344 Bacteria 2430
10 Ga0070675_100000286 3300005354 Bacteria 33765
11 Ga0070671_100000181 3300005355 Bacteria 42003
12 Ga0070674_100046061 3300005356 Bacteria 2982
13 Ga0070673_100002177 3300005364 Bacteria 11866
14 Ga0070659_100005476 3300005366 Bacteria 9120
15 Ga0070659_100392566 3300005366 Bacteria 1170
16 Ga0070667_100213927 3300005367 Bacteria 1714
17 Ga0070667_100789835 3300005367 Unclassified 881
18 Ga0070700_100379904 3300005441 Bacteria 1056
19 Ga0070678_100197445 3300005456 Bacteria 1658
20 Ga0070678_100366321 3300005456 Bacteria 1243
21 Ga0070662_100017036 3300005457 Bacteria 4889
22 Ga0070681_10002986 3300005458 Bacteria 15685
23 Ga0070698_100005436 3300005471 Bacteria 13910
24 Ga0070679_100027935 3300005530 Bacteria 5559
25 Ga0068853_100023599 3300005539 Bacteria 5151
26 Ga0070672_100003034 3300005543 Bacteria 10818
27 Ga0070665_100089551 3300005548 Bacteria 3083
28 Ga0068855_100055596 3300005563 Bacteria 4648
29 Ga0070664_100011048 3300005564 Bacteria 7323
30 Ga0068857_100038324 3300005577 Bacteria 4245
31 Ga0068854_100545208 3300005578 Bacteria 983
32 Ga0070702_100144782 3300005615 Bacteria 1518
33 Ga0068852_100014458 3300005616 Bacteria 6079
34 Ga0068859_100504376 3300005617 Bacteria 1305
35 Ga0068864_100049934 3300005618 Bacteria 3600
36 Ga0070717_10002845 3300006028 Bacteria 12269
37 Ga0070717_10076861 3300006028 Bacteria 2795
38 Ga0070717_10246186 3300006028 Bacteria 1578
39 Ga0097620_100504406 3300006931 Bacteria 1305
40 Ga0105240_10380765 3300009093 Bacteria 1594
41 Ga0105245_10060062 3300009098 Bacteria 3424
42 Ga0105245_10097877 3300009098 Bacteria 2710
43 Ga0105245_11603055 3300009098 Bacteria 703
44 Ga0105242_10014990 3300009176 Bacteria 6009
45 Ga0105248_10003267 3300009177 Bacteria 17984
46 Ga0105248_10010189 3300009177 Bacteria 10352
47 Ga0105248_10025420 3300009177 Bacteria 6583
48 Ga0105248_10077211 3300009177 Bacteria 3744
49 Ga0105237_10032001 3300009545 Bacteria 5327
50 Ga0105238_10007846 3300009551 Bacteria 10674
51 Ga0105239_10040934 3300010375 Bacteria 5078
52 Ga0105239_10455197 3300010375 Bacteria 1452
53 Ga0105246_10325657 3300011119 Bacteria 1251
54 Ga0157370_10021822 3300013104 Bacteria 6378
55 Ga0157369_10254414 3300013105 Bacteria 1833
56 Ga0157369_10361023 3300013105 Bacteria 1508
57 Ga0157374_10025203 3300013296 Bacteria 5337
58 Ga0157378_10149869 3300013297 Bacteria 2173
59 Ga0163162_10246290 3300013306 Bacteria 1919
60 Ga0157372_10001708 3300013307 Bacteria 23818
61 Ga0157372_10720616 3300013307 Bacteria 1160
62 Ga0157375_10007059 3300013308 Bacteria 9813
63 Ga0157375_10185388 3300013308 Bacteria 2234
64 Ga0163163_10024606 3300014325 Bacteria 5732
65 Ga0157379_10755121 3300014968 Unclassified 916
66 Ga0157376_10092751 3300014969 Bacteria 2619
67 Ga0213872_10000732 3300021361 Bacteria 24523
68 Ga0213872_10002021 3300021361 Bacteria 12321
69 Ga0213872_10004513 3300021361 Bacteria 7374
70 Ga0213872_10009146 3300021361 Bacteria 4762
71 Ga0213872_10018559 3300021361 Bacteria 3207
72 Ga0213872_10027541 3300021361 Bacteria 2608
73 Ga0213872_10054368 3300021361 Bacteria 1816
74 Ga0207680_10086395 3300025903 Bacteria 1984
75 Ga0207680_10186771 3300025903 Bacteria 1405
76 Ga0207647_10017144 3300025904 Bacteria 4930
77 Ga0207705_10077779 3300025909 Bacteria 2414
78 Ga0207654_10106987 3300025911 Bacteria 1733
79 Ga0207707_10028657 3300025912 Bacteria 4867
80 Ga0207695_10044088 3300025913 Bacteria 4748
81 Ga0207671_10074691 3300025914 Bacteria 2534
82 Ga0207657_10004475 3300025919 Bacteria 14779
83 Ga0207649_10013474 3300025920 Bacteria 4565
84 Ga0207649_10040793 3300025920 Bacteria 2824
85 Ga0207652_10023895 3300025921 Bacteria 5068
86 Ga0207681_10040180 3300025923 Bacteria 3111
87 Ga0207694_10000809 3300025924 Bacteria 27948
88 Ga0207650_10001159 3300025925 Bacteria 19346
89 Ga0207659_10000845 3300025926 Bacteria 18142
90 Ga0207687_10125837 3300025927 Bacteria 1924
91 Ga0207644_10332734 3300025931 Bacteria 1230
92 Ga0207690_10002078 3300025932 Bacteria 12270
93 Ga0207690_10050874 3300025932 Bacteria 2768
94 Ga0207686_10021942 3300025934 Bacteria 3672
95 Ga0207669_10017479 3300025937 Bacteria 3680
96 Ga0207691_10006579 3300025940 Bacteria 11225
97 Ga0207711_10005465 3300025941 Bacteria 10742
98 Ga0207711_10007507 3300025941 Bacteria 9119
99 Ga0207711_10078138 3300025941 Bacteria 2886
100 Ga0207711_10113986 3300025941 Bacteria 2407
101 Ga0207661_10529412 3300025944 Bacteria 1078
102 Ga0207679_10044773 3300025945 Bacteria 3196
103 Ga0207679_10398220 3300025945 Bacteria 1211
104 Ga0207667_10031636 3300025949 Bacteria 5710
105 Ga0207651_10005379 3300025960 Bacteria 6566
106 Ga0207640_10061626 3300025981 Bacteria 2485
107 Ga0207658_10010172 3300025986 Bacteria 6394
108 Ga0207658_10479729 3300025986 Bacteria 1105
109 Ga0207658_10764019 3300025986 Bacteria 876
110 Ga0207639_10000219 3300026041 Bacteria 42731
111 Ga0207708_10189029 3300026075 Bacteria 1638
112 Ga0207702_11277501 3300026078 Bacteria 728
113 Ga0207648_10292151 3300026089 Unclassified 1460
114 Ga0207676_10036473 3300026095 Bacteria 3741
115 Ga0207674_10051426 3300026116 Bacteria 4205
116 Ga0207683_10226983 3300026121 Bacteria 1702
117 Ga0207683_10322195 3300026121 Bacteria 1416
118 Ga0207698_10013165 3300026142 Bacteria 5446
119 Ga0268266_10048990 3300028379 Bacteria 3621
120 Ga0316182_1416945 3300030745 Bacteria 2419
121 Ga0265332_10200462 3300031238 Bacteria 829
122 Ga0265320_10007522 3300031240 Bacteria 6756
123 Ga0265313_10000061 3300031595 Bacteria 107220
124 Ga0265314_10017308 3300031711 Bacteria 5661
125 Ga0265314_10046107 3300031711 Bacteria 3077
126 Ga0316576_10009732 3300031727 Bacteria 6220
127 Ga0307516_10436606 3300031730 Bacteria 966
128 Ga0307413_10006283 3300031824 Bacteria 5401
129 Ga0307406_10049221 3300031901 Bacteria 2666
130 Ga0307412_10072986 3300031911 Bacteria 2347
131 Ga0307414_10017506 3300032004 Bacteria 4387
132 Ga0307414_10122653 3300032004 Bacteria 2001
133 Ga0307414_10384109 3300032004 Bacteria 1215
134 Ga0307414_10687173 3300032004 Bacteria 925
135 Ga0316574_0000488 3300035398 Bacteria 16036
136 Ga0316584_0024394 3300036712 Bacteria 4426
137 Ga0316584_0071618 3300036712 Bacteria 2597
138 Ga0400483_005593 3300039062 Bacteria 2958
139 Ga0400483_156365 3300039062 Bacteria 1609
140 Ga0436360_1124552 3300039438 Bacteria 1142
141 Ga0436361_0013069 3300039447 Bacteria 7217
142 Ga0436361_0090257 3300039447 Bacteria 7508
143 Ga0436361_0098274 3300039447 Bacteria 1188
144 Ga0436361_0228593 3300039447 Bacteria 1306
145 Ga0436361_0261284 3300039447 Bacteria 1942
146 Ga0436361_0278839 3300039447 Bacteria 1251
147 Ga0436361_0300342 3300039447 Bacteria 2918
148 Ga0436361_0429880 3300039447 Bacteria 88899
149 Ga0436361_0463062 3300039447 Bacteria 1441
150 Ga0436361_0560130 3300039447 Bacteria 882
151 Ga0436361_0784433 3300039447 Bacteria 44646
152 Ga0436361_0803780 3300039447 Bacteria 1888
153 Ga0436361_0839500 3300039447 Bacteria 2689
154 Ga0436361_0915036 3300039447 Bacteria 3512
155 Ga0436363_1145126 3300039450 Bacteria 1012
156 Ga0451577_0095458 3300042876 Bacteria 2655
157 Ga0453683_0010149 3300044673 Bacteria 6254
158 Ga0466966_0077580 3300044684 Bacteria 2073
159 Ga0466963_0150297 3300044694 Bacteria 1617
160 Ga0466963_0340050 3300044694 Bacteria 1057
161 Ga0453684_0026561 3300044712 Bacteria 8350
162 Ga0453684_0193876 3300044712 Bacteria 2374
163 Ga0466957_0035997 3300044842 Bacteria 2973
164 Ga0466957_0678407 3300044842 Bacteria 726
165 Ga0466960_0162382 3300044901 Bacteria 1200
166 Ga0466959_0490461 3300045049 Bacteria 831
167 Ga0451576_0001132 3300045051 Bacteria 48307
168 Ga0451576_0182500 3300045051 Bacteria 2191
169 Ga0466958_0000171 3300045836 Bacteria 23110
170 Ga0466967_1023936 3300045976 Bacteria 822
171 Ga0495608_0173945 3300046511 Bacteria 1365
172 Ga0495669_0002323 3300046684 Bacteria 7791
173 Ga0496101_0152129 3300048904 Bacteria 1770
174 Ga0496102_0204734 3300048905 Bacteria 1860
175 Ga0496104_0062431 3300048907 Bacteria 3532
176 Ga0496105_0063903 3300048908 Bacteria 3037
177 Ga0496106_0514912 3300048909 Bacteria 961
178 Ga0496107_0015701 3300048910 Bacteria 5309
179 Ga0496108_0031944 3300048911 Bacteria 4370
180 Ga0496108_0086112 3300048911 Bacteria 2668
181 Ga0496110_0000525 3300048913 Bacteria 26012
182 Ga0496110_0156379 3300048913 Bacteria 2065
183 Ga0496111_0016419 3300048914 Bacteria 5100
184 Ga0496111_0051372 3300048914 Bacteria 2976
185 Ga0496112_0076744 3300048915 Bacteria 3304
186 Ga0496113_0032526 3300048916 Bacteria 3791
187 Ga0496113_0597123 3300048916 Bacteria 884
188 Ga0496114_0010300 3300048917 Bacteria 7441
189 Ga0496115_0282194 3300048918 Bacteria 1363
190 Ga0496119_0137094 3300048922 Bacteria 1326
191 Ga0496124_0102445 3300048927 Bacteria 2317
192 Ga0496124_0328067 3300048927 Bacteria 1093
193 Ga0496125_0000282 3300048928 Bacteria 101380
194 Ga0496125_0329184 3300048928 Bacteria 922
195 Ga0496126_0066497 3300048929 Bacteria 3223
196 Ga0501032_0007831 3300049569 Bacteria 7784
197 Ga0501032_0153084 3300049569 Bacteria 1516
198 Ga0501033_0027928 3300049570 Bacteria 4241
199 Ga0501034_0002258 3300049571 Bacteria 23639
200 Ga0501034_0043088 3300049571 Bacteria 4568
201 Ga0501034_0116838 3300049571 Bacteria 2655
202 Ga0501034_0306341 3300049571 Bacteria 1524
203 Ga0501034_0577862 3300049571 Bacteria 1031
204 Ga0501034_1053650 3300049571 Bacteria 695
205 Ga0501036_0340016 3300049572 Bacteria 1254
206 Ga0501036_0355388 3300049572 Bacteria 1223
207 Ga0501037_0247786 3300049573 Bacteria 1247
208 Ga0501038_0084330 3300049574 Bacteria 2673
209 Ga0501038_0201595 3300049574 Bacteria 1597
210 Ga0501043_0243577 3300049579 Bacteria 1386
211 Ga0501047_0052644 3300049581 Bacteria 3935
212 Ga0501067_0096450 3300049583 Bacteria 1642
213 Ga0501068_0137285 3300049584 Bacteria 1531
214 Ga0501069_0117346 3300049585 Bacteria 1518
215 Ga0501070_0676934 3300049586 Bacteria 817
216 Ga0501073_0061452 3300049589 Bacteria 2621
217 Ga0501074_0101594 3300049590 Bacteria 2058
218 Ga0501080_0427897 3300049742 Bacteria 1188
219 Ga0501080_0513996 3300049742 Bacteria 1069
220 Ga0501083_0206738 3300049744 Bacteria 1280
221 Ga0501035_0083126 3300049822 Bacteria 2825
222 Ga0501035_0318836 3300049822 Bacteria 1306
223 Ga0501044_0329587 3300049823 Bacteria 1450
224 Ga0500604_0001022 3300053151 Bacteria 7822
225 Ga0500634_0000001 3300053161 Bacteria 258285
226 Ga0501084_0371685 3300054114 Bacteria 1208

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2513237351 2514591465 158
2 3300005441 Ga0070700_100379904 Ga0070700_1003799042 185
3 3300005456 Ga0070678_100366321 Ga0070678_1003663211 185
4 3300005615 Ga0070702_100144782 Ga0070702_1001447822 185
5 3300009098 Ga0105245_11603055 Ga0105245_116030551 185
6 3300011119 Ga0105246_10325657 Ga0105246_103256571 185
7 3300026075 Ga0207708_10189029 Ga0207708_101890292 185
8 3300026121 Ga0207683_10322195 Ga0207683_103221952 185
9 3300044901 Ga0466960_0162382 Ga0466960_0162382_439_1047 185
10 3300005367 Ga0070667_100213927 Ga0070667_1002139272 191
11 3300009177 Ga0105248_10010189 Ga0105248_1001018910 191
12 3300025903 Ga0207680_10186771 Ga0207680_101867712 191
13 3300025931 Ga0207644_10332734 Ga0207644_103327342 191
14 3300025941 Ga0207711_10007507 Ga0207711_1000750710 191
15 3300025986 Ga0207658_10764019 Ga0207658_107640192 191
16 3300031824 Ga0307413_10006283 Ga0307413_100062832 191
17 3300031911 Ga0307412_10072986 Ga0307412_100729862 191
18 3300032004 Ga0307414_10017506 Ga0307414_100175062 191
19 3300032004 Ga0307414_10384109 Ga0307414_103841091 191
20 3300048910 Ga0496107_0015701 Ga0496107_0015701_818_1393 191
21 3300048917 Ga0496114_0010300 Ga0496114_0010300_5335_5910 191
22 3300049571 Ga0501034_0002258 Ga0501034_0002258_22798_23421 191
23 3300049571 Ga0501034_1053650 Ga0501034_1053650_13_636 191
24 3300053161 Ga0500634_0000001 Ga0500634_0000001_19776_20399 191
25 iso_pu_bacteria 2643221674 2644413690 191
26 3300005327 Ga0070658_10243438 Ga0070658_102434381 192
27 3300005329 Ga0070683_100401290 Ga0070683_1004012901 192
28 3300005339 Ga0070660_100009620 Ga0070660_1000096205 192
29 3300005344 Ga0070661_100020032 Ga0070661_1000200326 192
30 3300005366 Ga0070659_100005476 Ga0070659_1000054762 192
31 3300005458 Ga0070681_10002986 Ga0070681_100029864 192
32 3300005471 Ga0070698_100005436 Ga0070698_10000543610 192
33 3300005530 Ga0070679_100027935 Ga0070679_1000279352 192
34 3300005539 Ga0068853_100023599 Ga0068853_1000235992 192
35 3300005563 Ga0068855_100055596 Ga0068855_1000555962 192
36 3300005577 Ga0068857_100038324 Ga0068857_1000383244 192
37 3300005578 Ga0068854_100545208 Ga0068854_1005452082 192
38 3300005616 Ga0068852_100014458 Ga0068852_1000144583 192
39 3300005617 Ga0068859_100504376 Ga0068859_1005043762 192
40 3300006028 Ga0070717_10002845 Ga0070717_100028456 192
41 3300006028 Ga0070717_10246186 Ga0070717_102461862 192
42 3300006931 Ga0097620_100504406 Ga0097620_1005044062 192
43 3300009093 Ga0105240_10380765 Ga0105240_103807651 192
44 3300009545 Ga0105237_10032001 Ga0105237_100320015 192
45 3300009551 Ga0105238_10007846 Ga0105238_100078462 192
46 3300010375 Ga0105239_10040934 Ga0105239_100409346 192
47 3300013104 Ga0157370_10021822 Ga0157370_100218226 192
48 3300013105 Ga0157369_10254414 Ga0157369_102544142 192
49 3300013105 Ga0157369_10361023 Ga0157369_103610232 192
50 3300013296 Ga0157374_10025203 Ga0157374_100252035 192
51 3300013307 Ga0157372_10001708 Ga0157372_100017082 192
52 3300013307 Ga0157372_10720616 Ga0157372_107206162 192
53 3300014969 Ga0157376_10092751 Ga0157376_100927512 192
54 3300025904 Ga0207647_10017144 Ga0207647_100171442 192
55 3300025909 Ga0207705_10077779 Ga0207705_100777792 192
56 3300025911 Ga0207654_10106987 Ga0207654_101069872 192
57 3300025912 Ga0207707_10028657 Ga0207707_100286575 192
58 3300025913 Ga0207695_10044088 Ga0207695_100440888 192
59 3300025914 Ga0207671_10074691 Ga0207671_100746912 192
60 3300025919 Ga0207657_10004475 Ga0207657_1000447510 192
61 3300025920 Ga0207649_10013474 Ga0207649_100134746 192
62 3300025921 Ga0207652_10023895 Ga0207652_100238956 192
63 3300025924 Ga0207694_10000809 Ga0207694_100008099 192
64 3300025932 Ga0207690_10002078 Ga0207690_100020789 192
65 3300025941 Ga0207711_10005465 Ga0207711_1000546511 192
66 3300025944 Ga0207661_10529412 Ga0207661_105294121 192
67 3300025945 Ga0207679_10398220 Ga0207679_103982201 192
68 3300025949 Ga0207667_10031636 Ga0207667_100316364 192
69 3300025981 Ga0207640_10061626 Ga0207640_100616262 192
70 3300026041 Ga0207639_10000219 Ga0207639_1000021915 192
71 3300026078 Ga0207702_11277501 Ga0207702_112775011 192
72 3300026116 Ga0207674_10051426 Ga0207674_100514264 192
73 3300026142 Ga0207698_10013165 Ga0207698_100131656 192
74 3300028379 Ga0268266_10048990 Ga0268266_100489902 192
75 3300031595 Ga0265313_10000061 Ga0265313_1000006147 192
76 3300032004 Ga0307414_10687173 Ga0307414_106871731 192
77 3300036712 Ga0316584_0071618 Ga0316584_0071618_1734_2339 192
78 3300039062 Ga0400483_005593 Ga0400483_005593_1212_1817 192
79 3300039062 Ga0400483_156365 Ga0400483_156365_154_759 192
80 3300044694 Ga0466963_0150297 Ga0466963_0150297_847_1425 192
81 3300045976 Ga0466967_1023936 Ga0466967_1023936_76_657 192
82 3300048905 Ga0496102_0204734 Ga0496102_0204734_384_1010 192
83 3300048907 Ga0496104_0062431 Ga0496104_0062431_844_1470 192
84 3300048908 Ga0496105_0063903 Ga0496105_0063903_1800_2426 192
85 3300048909 Ga0496106_0514912 Ga0496106_0514912_117_743 192
86 3300048911 Ga0496108_0086112 Ga0496108_0086112_1628_2254 192
87 3300048913 Ga0496110_0156379 Ga0496110_0156379_1092_1718 192
88 3300048914 Ga0496111_0051372 Ga0496111_0051372_2280_2906 192
89 3300048915 Ga0496112_0076744 Ga0496112_0076744_637_1263 192
90 3300048916 Ga0496113_0032526 Ga0496113_0032526_1658_2284 192
91 3300048918 Ga0496115_0282194 Ga0496115_0282194_36_662 192
92 3300048922 Ga0496119_0137094 Ga0496119_0137094_373_999 192
93 iso_pu_bacteria 2643221588 2643951037 192
94 iso_pu_bacteria 2840878972 2840879440 192
95 iso_pu_bacteria 2898795034 2898798788 192
96 iso_pu_bacteria 2899259804 2899261250 192
97 iso_pu_bacteria 3000017691 3000018016 192
98 iso_pu_bacteria 3000405567 3000409066 192
99 2162886012 MBSR1b_contig_2349244 MBSR1b_0243.00003690 193
100 3300005327 Ga0070658_10042368 Ga0070658_100423685 193
101 3300005331 Ga0070670_100004948 Ga0070670_1000049486 193
102 3300005335 Ga0070666_10079334 Ga0070666_100793342 193
103 3300005344 Ga0070661_100078825 Ga0070661_1000788253 193
104 3300005354 Ga0070675_100000286 Ga0070675_10000028613 193
105 3300005355 Ga0070671_100000181 Ga0070671_10000018140 193
106 3300005356 Ga0070674_100046061 Ga0070674_1000460611 193
107 3300005364 Ga0070673_100002177 Ga0070673_10000217711 193
108 3300005366 Ga0070659_100392566 Ga0070659_1003925662 193
109 3300005367 Ga0070667_100789835 Ga0070667_1007898351 193
110 3300005456 Ga0070678_100197445 Ga0070678_1001974452 193
111 3300005457 Ga0070662_100017036 Ga0070662_1000170365 193
112 3300005543 Ga0070672_100003034 Ga0070672_1000030349 193
113 3300005548 Ga0070665_100089551 Ga0070665_1000895512 193
114 3300005564 Ga0070664_100011048 Ga0070664_1000110481 193
115 3300005618 Ga0068864_100049934 Ga0068864_1000499343 193
116 3300006028 Ga0070717_10076861 Ga0070717_100768613 193
117 3300009098 Ga0105245_10060062 Ga0105245_100600622 193
118 3300009098 Ga0105245_10097877 Ga0105245_100978772 193
119 3300009176 Ga0105242_10014990 Ga0105242_100149903 193
120 3300009177 Ga0105248_10003267 Ga0105248_100032674 193
121 3300009177 Ga0105248_10025420 Ga0105248_100254203 193
122 3300009177 Ga0105248_10077211 Ga0105248_100772114 193
123 3300010375 Ga0105239_10455197 Ga0105239_104551972 193
124 3300013297 Ga0157378_10149869 Ga0157378_101498692 193
125 3300013306 Ga0163162_10246290 Ga0163162_102462903 193
126 3300013308 Ga0157375_10007059 Ga0157375_100070597 193
127 3300013308 Ga0157375_10185388 Ga0157375_101853882 193
128 3300014325 Ga0163163_10024606 Ga0163163_100246065 193
129 3300014968 Ga0157379_10755121 Ga0157379_107551212 193
130 3300021361 Ga0213872_10000732 Ga0213872_1000073218 193
131 3300021361 Ga0213872_10002021 Ga0213872_100020211 193
132 3300021361 Ga0213872_10004513 Ga0213872_100045136 193
133 3300021361 Ga0213872_10009146 Ga0213872_100091465 193
134 3300021361 Ga0213872_10018559 Ga0213872_100185593 193
135 3300021361 Ga0213872_10027541 Ga0213872_100275413 193
136 3300021361 Ga0213872_10054368 Ga0213872_100543682 193
137 3300025903 Ga0207680_10086395 Ga0207680_100863952 193
138 3300025920 Ga0207649_10040793 Ga0207649_100407932 193
139 3300025923 Ga0207681_10040180 Ga0207681_100401802 193
140 3300025925 Ga0207650_10001159 Ga0207650_100011598 193
141 3300025926 Ga0207659_10000845 Ga0207659_100008459 193
142 3300025927 Ga0207687_10125837 Ga0207687_101258372 193
143 3300025932 Ga0207690_10050874 Ga0207690_100508743 193
144 3300025934 Ga0207686_10021942 Ga0207686_100219422 193
145 3300025937 Ga0207669_10017479 Ga0207669_100174793 193
146 3300025940 Ga0207691_10006579 Ga0207691_1000657910 193
147 3300025941 Ga0207711_10078138 Ga0207711_100781383 193
148 3300025941 Ga0207711_10113986 Ga0207711_101139863 193
149 3300025945 Ga0207679_10044773 Ga0207679_100447734 193
150 3300025960 Ga0207651_10005379 Ga0207651_100053793 193
151 3300025986 Ga0207658_10010172 Ga0207658_100101727 193
152 3300025986 Ga0207658_10479729 Ga0207658_104797292 193
153 3300026089 Ga0207648_10292151 Ga0207648_102921511 193
154 3300026095 Ga0207676_10036473 Ga0207676_100364733 193
155 3300026121 Ga0207683_10226983 Ga0207683_102269832 193
156 3300030745 Ga0316182_1416945 Ga0316182_14169453 193
157 3300031238 Ga0265332_10200462 Ga0265332_102004622 193
158 3300031240 Ga0265320_10007522 Ga0265320_100075224 193
159 3300031711 Ga0265314_10017308 Ga0265314_100173084 193
160 3300031711 Ga0265314_10046107 Ga0265314_100461073 193
161 3300031727 Ga0316576_10009732 Ga0316576_100097325 193
162 3300031730 Ga0307516_10436606 Ga0307516_104366061 193
163 3300031901 Ga0307406_10049221 Ga0307406_100492212 193
164 3300032004 Ga0307414_10122653 Ga0307414_101226532 193
165 3300035398 Ga0316574_0000488 Ga0316574_0000488_13500_14111 193
166 3300036712 Ga0316584_0024394 Ga0316584_0024394_2304_2915 193
167 3300039438 Ga0436360_1124552 Ga0436360_1124552_374_1015 193
168 3300039447 Ga0436361_0013069 Ga0436361_0013069_5831_6412 193
169 3300039447 Ga0436361_0090257 Ga0436361_0090257_2690_3271 193
170 3300039447 Ga0436361_0098274 Ga0436361_0098274_58_639 193
171 3300039447 Ga0436361_0228593 Ga0436361_0228593_255_836 193
172 3300039447 Ga0436361_0261284 Ga0436361_0261284_402_983 193
173 3300039447 Ga0436361_0278839 Ga0436361_0278839_491_1072 193
174 3300039447 Ga0436361_0300342 Ga0436361_0300342_41_622 193
175 3300039447 Ga0436361_0429880 Ga0436361_0429880_49018_49599 193
176 3300039447 Ga0436361_0463062 Ga0436361_0463062_402_1106 193
177 3300039447 Ga0436361_0560130 Ga0436361_0560130_255_836 193
178 3300039447 Ga0436361_0784433 Ga0436361_0784433_16355_16936 193
179 3300039447 Ga0436361_0803780 Ga0436361_0803780_471_1052 193
180 3300039447 Ga0436361_0839500 Ga0436361_0839500_56_637 193
181 3300039447 Ga0436361_0915036 Ga0436361_0915036_1990_2571 193
182 3300039450 Ga0436363_1145126 Ga0436363_1145126_100_714 193
183 3300042876 Ga0451577_0095458 Ga0451577_0095458_902_1489 193
184 3300044673 Ga0453683_0010149 Ga0453683_0010149_2756_3343 193
185 3300044684 Ga0466966_0077580 Ga0466966_0077580_222_803 193
186 3300044694 Ga0466963_0340050 Ga0466963_0340050_10_600 193
187 3300044712 Ga0453684_0026561 Ga0453684_0026561_3694_4281 193
188 3300044712 Ga0453684_0193876 Ga0453684_0193876_1750_2337 193
189 3300044842 Ga0466957_0035997 Ga0466957_0035997_930_1511 193
190 3300044842 Ga0466957_0678407 Ga0466957_0678407_67_648 193
191 3300045049 Ga0466959_0490461 Ga0466959_0490461_192_773 193
192 3300045051 Ga0451576_0001132 Ga0451576_0001132_39985_40572 193
193 3300045051 Ga0451576_0182500 Ga0451576_0182500_615_1202 193
194 3300045836 Ga0466958_0000171 Ga0466958_0000171_3915_4496 193
195 3300046511 Ga0495608_0173945 Ga0495608_0173945_473_1114 193
196 3300046684 Ga0495669_0002323 Ga0495669_0002323_4112_4693 193
197 3300048904 Ga0496101_0152129 Ga0496101_0152129_826_1407 193
198 3300048911 Ga0496108_0031944 Ga0496108_0031944_2355_2936 193
199 3300048913 Ga0496110_0000525 Ga0496110_0000525_22745_23326 193
200 3300048914 Ga0496111_0016419 Ga0496111_0016419_2717_3352 193
201 3300048916 Ga0496113_0597123 Ga0496113_0597123_155_736 193
202 3300048927 Ga0496124_0102445 Ga0496124_0102445_62_697 193
203 3300048927 Ga0496124_0328067 Ga0496124_0328067_31_666 193
204 3300048928 Ga0496125_0000282 Ga0496125_0000282_18450_19085 193
205 3300048928 Ga0496125_0329184 Ga0496125_0329184_144_773 193
206 3300048929 Ga0496126_0066497 Ga0496126_0066497_282_911 193
207 3300049569 Ga0501032_0007831 Ga0501032_0007831_6872_7468 193
208 3300049569 Ga0501032_0153084 Ga0501032_0153084_154_765 193
209 3300049570 Ga0501033_0027928 Ga0501033_0027928_2395_2991 193
210 3300049571 Ga0501034_0043088 Ga0501034_0043088_577_1188 193
211 3300049571 Ga0501034_0116838 Ga0501034_0116838_786_1382 193
212 3300049571 Ga0501034_0306341 Ga0501034_0306341_906_1502 193
213 3300049571 Ga0501034_0577862 Ga0501034_0577862_277_867 193
214 3300049572 Ga0501036_0340016 Ga0501036_0340016_295_948 193
215 3300049572 Ga0501036_0355388 Ga0501036_0355388_553_1149 193
216 3300049573 Ga0501037_0247786 Ga0501037_0247786_96_707 193
217 3300049574 Ga0501038_0084330 Ga0501038_0084330_1628_2224 193
218 3300049574 Ga0501038_0201595 Ga0501038_0201595_525_1178 193
219 3300049579 Ga0501043_0243577 Ga0501043_0243577_676_1272 193
220 3300049581 Ga0501047_0052644 Ga0501047_0052644_3227_3823 193
221 3300049583 Ga0501067_0096450 Ga0501067_0096450_512_1123 193
222 3300049584 Ga0501068_0137285 Ga0501068_0137285_589_1200 193
223 3300049585 Ga0501069_0117346 Ga0501069_0117346_819_1472 193
224 3300049586 Ga0501070_0676934 Ga0501070_0676934_69_665 193
225 3300049589 Ga0501073_0061452 Ga0501073_0061452_1338_1949 193
226 3300049590 Ga0501074_0101594 Ga0501074_0101594_653_1264 193
227 3300049742 Ga0501080_0427897 Ga0501080_0427897_304_915 193
228 3300049742 Ga0501080_0513996 Ga0501080_0513996_149_745 193
229 3300049744 Ga0501083_0206738 Ga0501083_0206738_61_672 193
230 3300049822 Ga0501035_0083126 Ga0501035_0083126_1607_2203 193
231 3300049822 Ga0501035_0318836 Ga0501035_0318836_630_1241 193
232 3300049823 Ga0501044_0329587 Ga0501044_0329587_345_956 193
233 3300053151 Ga0500604_0001022 Ga0500604_0001022_4042_4698 193
234 3300054114 Ga0501084_0371685 Ga0501084_0371685_556_1167 193
235 iso_pu_bacteria 2510461069 2510841418 193
236 iso_pu_bacteria 2599185156 2599333227 193
237 iso_pu_bacteria 2643221591 2643966849 193
238 iso_pu_bacteria 2842922631 2842923534 193
239 iso_pu_bacteria 2884298095 2884299405 193

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10590

PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

194

234

0.98

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

55

141

0.93

PF12766

Pyridox_oxase_2

Pyridoxamine 5'-phosphate oxidase

48

138

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wv4-assembly1.cif.gz_B x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.9549 5 193
6ymh-assembly1.cif.gz_AAA x-ray structure of the k72i, y129f, r133l, h199a quadruple mutant of pnp-oxidase from e. coli in complex with plp 0.9527 5 193
6ylz-assembly1.cif.gz_AAA-2 x-ray structure of the k72i,y129f,r133l, h199a quadruple mutant of pnp-oxidase from e. coli 0.9524 5 193
1dnl-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase complexed with fmn at 1.8 angstrom resolution 0.9471 5 193
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.9445 5 193
ID Description Score Start End Superfamily
1wv4B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9549 5 193 2.30.110.10
1g78A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9461 5 193 2.30.110.10
af_P9WIJ1_24_224_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9445 3 193 2.30.110.10
af_Q9LTX3_323_519_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9375 2 183 2.30.110.10
4hmxA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9303 4 193 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A259J9G6-F1-model_v4 deleted 0.9887 4 96
AF-A0A530CBP7-F1-model_v4 Pyridoxal 5'-phosphate synthase (EC 1.4.3.5) 0.9835 3 90 GO:0004733
GO:0008615
GO:0010181
AF-A0A658NTF9-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9829 1 91 GO:0004733
GO:0008615
GO:0010181
AF-A0A528D7D6-F1-model_v4 Pyridoxal 5'-phosphate synthase (EC 1.4.3.5) 0.9813 3 99 GO:0004733
GO:0008615
GO:0010181
AF-A0A0N5A5Q2-F1-model_v4 pyridoxal 5'-phosphate synthase (EC 1.4.3.5) 0.9757 3 99 GO:0004733
GO:0008615
GO:0010181

Feature Viewer

pLDDT pTM Quality
92.35 0.87 High
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Predicted Structure (AlphaFold2)

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