F351829

General Info

Members Datasets Scaffolds Average Seq Length
239 182 478 597

Family's Representative Sequence

Representative Sequence 3300006358|Ga0068871_100063756|Ga0068871_1000637562
Length 667
Sequence MASKAPFNPLRLAPPRVDVERRVDGTLILRSPQPLAPFPKHLGHHLRRWAREAPERVFLAERAPTKAWRRVGYSQMLGWVESLAQVLLDHRLSRERPLMVLSENSIEVAALSLAALYVGVPLVPVSPAYSLQSQDWAKLRAIASLTTPGMVYARDGERYAHAIEAIRAPGMAVVTDDTLPGTLRLDDLRTTTATSVVARAFESVHSDQVAKVLFTSGSTGQPKGVITTHEMLCANQQSIAQCWPFVEDRPPIILDWLPWSHAFGANHNFNLVLRNGGSLYIDDGKPLPGLIEKTVANLRDVSPTMYFNAPRGFDMLMPFLEADVAVRDCLFHDLDLIFYAGAALPQNLWDRLEALSIAARGERVRMVSSWGATETTSTATSVHYEIERAGVIGIPAPGVEIMLTPSDTKMELRVRGPMVTPGYWKRPDLTAAAFDDEGFYRIGDAGRLDDPADPSRGIVFDGRVAEDFKLLSGTWVHCGEVRLRAIAAASPIVQDAVVTGHDRETIGLLIFLNLAAARSVAGDATLTLQQLAAHPKVRAHVTDGLAADNLVRDGGSMRIARVVLLPDLPSIDYGEITDKGYVNQRAVTERRASLIERLYAEVPDTEVLLLGTEGNRAGDANRSRRNVMQTIDRLPAALDETTGRRQPHDIPAGRDPEPSVVLRRLTK

Samples

Sample ID Description Type Environment
1 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
78 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
79 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
132 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
168 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
169 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
172 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
173 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
177 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
178 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
179 2643221651 Afipia sp. Root123D2 Isolate Unclassified
180 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
181 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
182 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.49
Metatranscriptomes 0
Isolates 2.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.53
Nodule 0
Rhizoplane 2.51
Rhizosphere 84.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068871_100063756 3300006358 Bacteria 3015
2 JGI25160J50197_1002305 3300003354 Bacteria 8949
3 Ga0065712_10068395 3300005290 Bacteria 10933
4 Ga0065707_10002878 3300005295 Bacteria 5113
5 Ga0070683_100042090 3300005329 Bacteria 4205
6 Ga0070670_100009307 3300005331 Bacteria 8392
7 Ga0068869_100033402 3300005334 Bacteria 3631
8 Ga0070666_10039928 3300005335 Bacteria 3130
9 Ga0070674_100005501 3300005356 Bacteria 7322
10 Ga0070673_100026655 3300005364 Bacteria 4272
11 Ga0070673_100074181 3300005364 Bacteria 2741
12 Ga0070713_100002213 3300005436 Bacteria 12601
13 Ga0070710_10053408 3300005437 Bacteria 2276
14 Ga0070711_100072767 3300005439 Bacteria 2426
15 Ga0070705_100045782 3300005440 Bacteria 2519
16 Ga0070705_100055952 3300005440 Bacteria 2321
17 Ga0070694_100057439 3300005444 Bacteria 2645
18 Ga0070678_100028546 3300005456 Bacteria 3807
19 Ga0070706_100001985 3300005467 Bacteria 21100
20 Ga0070698_100001956 3300005471 Bacteria 22880
21 Ga0070698_100024179 3300005471 Bacteria 6339
22 Ga0070698_100089826 3300005471 Bacteria 3056
23 Ga0068853_100013728 3300005539 Bacteria 6618
24 Ga0070672_100027508 3300005543 Bacteria 4242
25 Ga0070672_100124139 3300005543 Bacteria 2116
26 Ga0070696_100032852 3300005546 Bacteria 3562
27 Ga0070665_100049637 3300005548 Bacteria 4210
28 Ga0070704_100004935 3300005549 Bacteria 7744
29 Ga0070664_100093598 3300005564 Bacteria 2604
30 Ga0068856_100009778 3300005614 Bacteria 9318
31 Ga0068859_100003091 3300005617 Bacteria 16891
32 Ga0068859_100065688 3300005617 Bacteria 3662
33 Ga0068859_100080011 3300005617 Bacteria 3308
34 Ga0068859_100084971 3300005617 Bacteria 3209
35 Ga0068860_100012818 3300005843 Bacteria 8241
36 Ga0068862_100035519 3300005844 Bacteria 4221
37 Ga0081538_10033862 3300005981 Bacteria 3390
38 Ga0081540_1000803 3300005983 Bacteria 28862
39 Ga0081539_10005468 3300005985 Bacteria 12947
40 Ga0070717_10008009 3300006028 Bacteria 7874
41 Ga0070717_10012848 3300006028 Bacteria 6394
42 Ga0075365_10004510 3300006038 Bacteria 7389
43 Ga0075364_10010962 3300006051 Bacteria 5496
44 Ga0075367_10005941 3300006178 Bacteria 6125
45 Ga0075428_100010433 3300006844 Bacteria 10317
46 Ga0075428_100013129 3300006844 Bacteria 9212
47 Ga0075428_100084554 3300006844 Bacteria 3462
48 Ga0075430_100011382 3300006846 Bacteria 7550
49 Ga0075431_100003033 3300006847 Bacteria 16243
50 Ga0075431_100018668 3300006847 Bacteria 7065
51 Ga0075433_10116380 3300006852 Bacteria 2372
52 Ga0075434_100023875 3300006871 Bacteria 5968
53 Ga0075429_100000220 3300006880 Bacteria 38587
54 Ga0097620_100003091 3300006931 Bacteria 16891
55 Ga0097620_100065686 3300006931 Bacteria 3662
56 Ga0097620_100080013 3300006931 Bacteria 3308
57 Ga0097620_100084975 3300006931 Bacteria 3209
58 Ga0111539_10001085 3300009094 Bacteria 35942
59 Ga0111539_10004198 3300009094 Bacteria 18902
60 Ga0111539_10004287 3300009094 Bacteria 18652
61 Ga0111539_10025511 3300009094 Bacteria 7247
62 Ga0111539_10028841 3300009094 Bacteria 6769
63 Ga0114129_10003978 3300009147 Bacteria 20874
64 Ga0114129_10009759 3300009147 Bacteria 13688
65 Ga0114129_10050195 3300009147 Bacteria 5860
66 Ga0114129_10057897 3300009147 Bacteria 5422
67 Ga0105243_10014123 3300009148 Bacteria 6041
68 Ga0105243_10065720 3300009148 Bacteria 2915
69 Ga0105248_10077811 3300009177 Bacteria 3729
70 Ga0105239_10113010 3300010375 Bacteria 3012
71 Ga0157378_10028948 3300013297 Bacteria 4890
72 Ga0157375_10013698 3300013308 Bacteria 7228
73 Ga0157375_10019195 3300013308 Bacteria 6212
74 Ga0163163_10116260 3300014325 Bacteria 2706
75 Ga0163163_10153882 3300014325 Bacteria 2343
76 Ga0157380_10009910 3300014326 Bacteria 6839
77 Ga0157377_10045824 3300014745 Bacteria 2444
78 Ga0157379_10201755 3300014968 Bacteria 1799
79 Ga0213876_10010470 3300021384 Bacteria 4974
80 Ga0209676_1005213 3300025292 Bacteria 6887
81 Ga0207682_10002565 3300025893 Bacteria 8112
82 Ga0207692_10039950 3300025898 Bacteria 2312
83 Ga0207645_10048078 3300025907 Bacteria 2723
84 Ga0207643_10031788 3300025908 Bacteria 2944
85 Ga0207684_10001603 3300025910 Bacteria 24022
86 Ga0207684_10063442 3300025910 Bacteria 3136
87 Ga0207650_10060894 3300025925 Bacteria 2817
88 Ga0207659_10001988 3300025926 Bacteria 12095
89 Ga0207664_10042191 3300025929 Bacteria 3560
90 Ga0207644_10039911 3300025931 Bacteria 3316
91 Ga0207669_10010325 3300025937 Bacteria 4491
92 Ga0207691_10010150 3300025940 Bacteria 9037
93 Ga0207691_10013000 3300025940 Bacteria 7970
94 Ga0207711_10104185 3300025941 Bacteria 2513
95 Ga0207689_10040584 3300025942 Bacteria 3852
96 Ga0207679_10127398 3300025945 Bacteria 2037
97 Ga0207641_10026764 3300026088 Bacteria 4761
98 Ga0207648_10000533 3300026089 Bacteria 42312
99 Ga0207648_10016003 3300026089 Bacteria 6873
100 Ga0207648_10052129 3300026089 Bacteria 3577
101 Ga0207648_10142173 3300026089 Bacteria 2115
102 Ga0207675_100000401 3300026118 Bacteria 41583
103 Ga0207675_100022704 3300026118 Bacteria 5839
104 Ga0207683_10058633 3300026121 Bacteria 3380
105 Ga0207428_10000592 3300027907 Bacteria 42773
106 Ga0207428_10001182 3300027907 Bacteria 28099
107 Ga0207428_10038713 3300027907 Bacteria 3875
108 Ga0268265_10209452 3300028380 Bacteria 1698
109 Ga0307515_10054656 3300028794 Bacteria 5856
110 Ga0307512_10008219 3300030522 Bacteria 10207
111 Ga0265320_10015029 3300031240 Bacteria 4385
112 Ga0265325_10019036 3300031241 Bacteria 3802
113 Ga0265340_10007213 3300031247 Bacteria 6050
114 Ga0307513_10042291 3300031456 Bacteria 5019
115 Ga0307516_10008312 3300031730 Bacteria 11762
116 Ga0307516_10048653 3300031730 Bacteria 4172
117 Ga0307406_10053755 3300031901 Bacteria 2567
118 Ga0307412_10094095 3300031911 Bacteria 2103
119 Ga0307416_100014943 3300032002 Bacteria 5342
120 Ga0307415_100003493 3300032126 Bacteria 8012
121 Ga0373934_0001120 3300035086 Bacteria 9731
122 Ga0373934_0019620 3300035086 Bacteria 2596
123 Ga0373936_0001578 3300035113 Bacteria 8319
124 Ga0373956_0000321 3300035119 Bacteria 19382
125 Ga0373957_0009242 3300035120 Bacteria 3219
126 Ga0373955_0000067 3300035172 Bacteria 41250
127 Ga0373924_0001128 3300035410 Bacteria 8566
128 Ga0373933_0000174 3300035724 Bacteria 42076
129 Ga0373937_0000021 3300036401 Bacteria 128447
130 Ga0373925_0056024 3300037068 Bacteria 2952
131 Ga0395898_0011354 3300037466 Bacteria 9255
132 Ga0395905_0010754 3300037471 Bacteria 8872
133 Ga0395905_0171617 3300037471 Bacteria 2037
134 Ga0436364_0786034 3300037853 Bacteria 3070
135 Ga0395901_0002134 3300038443 Bacteria 20258
136 Ga0436365_1431540 3300039437 Bacteria 5362
137 Ga0439435_0006807 3300042436 Bacteria 2586
138 Ga0451577_0001465 3300042876 Bacteria 31307
139 Ga0451577_0001824 3300042876 Bacteria 27205
140 Ga0451577_0017439 3300042876 Bacteria 6634
141 Ga0466969_0008112 3300044656 Bacteria 5575
142 Ga0466969_0061860 3300044656 Bacteria 1818
143 Ga0466966_0001722 3300044684 Bacteria 14149
144 Ga0466963_0022042 3300044694 Bacteria 4029
145 Ga0453684_0069826 3300044712 Bacteria 4453
146 Ga0466959_0032725 3300045049 Bacteria 3849
147 Ga0451576_0006365 3300045051 Bacteria 14497
148 Ga0451576_0008492 3300045051 Bacteria 12050
149 Ga0451576_0157713 3300045051 Bacteria 2368
150 Ga0466967_0022489 3300045976 Bacteria 5146
151 Ga0466967_0023891 3300045976 Bacteria 5017
152 Ga0495592_0000013 3300046454 Bacteria 151780
153 Ga0495638_0008787 3300046460 Bacteria 7137
154 Ga0495651_0000022 3300046462 Bacteria 118601
155 Ga0495650_0007579 3300046471 Bacteria 6494
156 Ga0495650_0015216 3300046471 Bacteria 3956
157 Ga0495664_0088646 3300046477 Bacteria 1859
158 Ga0495584_0013817 3300046491 Bacteria 4116
159 Ga0495606_0014344 3300046507 Bacteria 6194
160 Ga0495606_0017127 3300046507 Bacteria 5494
161 Ga0495608_0000029 3300046511 Bacteria 151790
162 Ga0495608_0101058 3300046511 Bacteria 1859
163 Ga0495628_0002553 3300046516 Bacteria 16372
164 Ga0495628_0024627 3300046516 Bacteria 4923
165 Ga0495630_0027643 3300046517 Bacteria 4210
166 Ga0495652_0000412 3300046529 Bacteria 49856
167 Ga0495652_0017873 3300046529 Bacteria 6329
168 Ga0495665_0002982 3300046531 Bacteria 9148
169 Ga0495586_0004181 3300046535 Bacteria 7734
170 Ga0495586_0013255 3300046535 Bacteria 4370
171 Ga0495587_0000022 3300046536 Bacteria 151790
172 Ga0495645_0003805 3300046543 Bacteria 10257
173 Ga0495667_0000028 3300046559 Bacteria 151705
174 Ga0495625_0001678 3300046660 Bacteria 25843
175 Ga0495635_0081669 3300046663 Bacteria 2211
176 Ga0495657_0000036 3300046675 Bacteria 118645
177 Ga0495599_0000131 3300046678 Bacteria 48587
178 Ga0495646_0002944 3300046680 Bacteria 10552
179 Ga0495646_0022103 3300046680 Bacteria 4014
180 Ga0495624_0005611 3300046690 Bacteria 9006
181 Ga0495649_0000039 3300046694 Bacteria 126399
182 Ga0495600_0034717 3300046809 Bacteria 3274
183 Ga0495604_0000023 3300047317 Bacteria 151689
184 Ga0495672_0004670 3300047320 Bacteria 11098
185 Ga0495680_0000232 3300047322 Bacteria 60902
186 Ga0495680_0015532 3300047322 Bacteria 6567
187 Ga0495675_0000492 3300047444 Bacteria 25639
188 Ga0495684_0016813 3300047471 Bacteria 5636
189 Ga0495593_0009384 3300047673 Bacteria 5678
190 Ga0495602_0000653 3300048088 Bacteria 32538
191 Ga0496104_0000469 3300048907 Bacteria 34760
192 Ga0496108_0002343 3300048911 Bacteria 15171
193 Ga0496109_0004016 3300048912 Bacteria 12286
194 Ga0496109_0031114 3300048912 Bacteria 4787
195 Ga0496112_0102348 3300048915 Bacteria 2834
196 Ga0496113_0017034 3300048916 Bacteria 5035
197 Ga0496121_0005680 3300048924 Bacteria 15870
198 Ga0496124_0010262 3300048927 Bacteria 9509
199 Ga0496126_0001784 3300048929 Bacteria 31760
200 Ga0501043_0109640 3300049579 Bacteria 2168
201 Ga0501072_0030198 3300049588 Bacteria 4237
202 Ga0501075_0023690 3300049591 Bacteria 4496
203 Ga0501076_0002357 3300049592 Bacteria 12930
204 Ga0501079_0018485 3300049741 Bacteria 5326
205 Ga0501079_0077554 3300049741 Bacteria 2570
206 Ga0501081_0010276 3300049743 Bacteria 6110
207 Ga0501083_0017312 3300049744 Bacteria 5024
208 nmdc:mga03n38_647_c1 3300050490 Bacteria 8936
209 nmdc:mga00v17_10679_c1 3300050491 Bacteria 5024
210 nmdc:mga0k408_5929_c1 3300050493 Bacteria 6517
211 nmdc:mga06z11_30852_c1 3300050494 Bacteria 2598
212 nmdc:mga06z11_3325_c1 3300050494 Bacteria 6217
213 nmdc:mga04h51_7683_c1 3300050495 Bacteria 2856
214 nmdc:mga05p37_431_c1 3300050507 Bacteria 45404
215 nmdc:mga09592_229_c1 3300050508 Bacteria 40458
216 nmdc:mga0qj67_13855_c1 3300050509 Bacteria 6086
217 nmdc:mga06r32_73241_c1 3300050510 Bacteria 3318
218 nmdc:mga08y16_11947_c1 3300050511 Bacteria 9119
219 nmdc:mga08y16_21055_c1 3300050511 Bacteria 6885
220 nmdc:mga08y16_21749_c1 3300050511 Bacteria 6769
221 nmdc:mga08y16_22374_c1 3300050511 Bacteria 6672
222 nmdc:mga08y16_2706_c1 3300050511 Bacteria 18192
223 nmdc:mga0n895_35469_c1 3300050512 Bacteria 4809
224 Ga0495595_0002286 3300053084 Bacteria 7460
225 Ga0500647_0007926 3300053091 Bacteria 4593
226 Ga0500566_0013405 3300053094 Bacteria 4827
227 Ga0500641_0016313 3300053096 Bacteria 2766
228 Ga0500572_003325 3300053111 Bacteria 3700
229 Ga0500595_004630 3300053119 Bacteria 6134
230 Ga0500642_0000223 3300053130 Bacteria 22470
231 Ga0500616_0000046 3300053153 Bacteria 333409
232 Ga0501084_0064571 3300054114 Bacteria 3063
233 Ga0530510_0011377 3300061734 Bacteria 6245
234 2621299506 2619619299 Bacteria 6649820
235 2623501028 2622736605 Bacteria 4992138
236 2644290096 2643221651 Bacteria 4798932
237 2817490869 2816332298 Bacteria 6852809
238 3003005369 3002998708 Bacteria 11715108
239 8055883935 8055878733 Bacteria 5907058
240 Ga0068871_100063756
241 JGI25160J50197_1002305
242 Ga0065712_10068395
243 Ga0065707_10002878
244 Ga0070683_100042090
245 Ga0070670_100009307
246 Ga0068869_100033402
247 Ga0070666_10039928
248 Ga0070674_100005501
249 Ga0070673_100026655
250 Ga0070673_100074181
251 Ga0070713_100002213
252 Ga0070710_10053408
253 Ga0070711_100072767
254 Ga0070705_100045782
255 Ga0070705_100055952
256 Ga0070694_100057439
257 Ga0070678_100028546
258 Ga0070706_100001985
259 Ga0070698_100001956
260 Ga0070698_100024179
261 Ga0070698_100089826
262 Ga0068853_100013728
263 Ga0070672_100027508
264 Ga0070672_100124139
265 Ga0070696_100032852
266 Ga0070665_100049637
267 Ga0070704_100004935
268 Ga0070664_100093598
269 Ga0068856_100009778
270 Ga0068859_100003091
271 Ga0068859_100065688
272 Ga0068859_100080011
273 Ga0068859_100084971
274 Ga0068860_100012818
275 Ga0068862_100035519
276 Ga0081538_10033862
277 Ga0081540_1000803
278 Ga0081539_10005468
279 Ga0070717_10008009
280 Ga0070717_10012848
281 Ga0075365_10004510
282 Ga0075364_10010962
283 Ga0075367_10005941
284 Ga0075428_100010433
285 Ga0075428_100013129
286 Ga0075428_100084554
287 Ga0075430_100011382
288 Ga0075431_100003033
289 Ga0075431_100018668
290 Ga0075433_10116380
291 Ga0075434_100023875
292 Ga0075429_100000220
293 Ga0097620_100003091
294 Ga0097620_100065686
295 Ga0097620_100080013
296 Ga0097620_100084975
297 Ga0111539_10001085
298 Ga0111539_10004198
299 Ga0111539_10004287
300 Ga0111539_10025511
301 Ga0111539_10028841
302 Ga0114129_10003978
303 Ga0114129_10009759
304 Ga0114129_10050195
305 Ga0114129_10057897
306 Ga0105243_10014123
307 Ga0105243_10065720
308 Ga0105248_10077811
309 Ga0105239_10113010
310 Ga0157378_10028948
311 Ga0157375_10013698
312 Ga0157375_10019195
313 Ga0163163_10116260
314 Ga0163163_10153882
315 Ga0157380_10009910
316 Ga0157377_10045824
317 Ga0157379_10201755
318 Ga0213876_10010470
319 Ga0209676_1005213
320 Ga0207682_10002565
321 Ga0207692_10039950
322 Ga0207645_10048078
323 Ga0207643_10031788
324 Ga0207684_10001603
325 Ga0207684_10063442
326 Ga0207650_10060894
327 Ga0207659_10001988
328 Ga0207664_10042191
329 Ga0207644_10039911
330 Ga0207669_10010325
331 Ga0207691_10010150
332 Ga0207691_10013000
333 Ga0207711_10104185
334 Ga0207689_10040584
335 Ga0207679_10127398
336 Ga0207641_10026764
337 Ga0207648_10000533
338 Ga0207648_10016003
339 Ga0207648_10052129
340 Ga0207648_10142173
341 Ga0207675_100000401
342 Ga0207675_100022704
343 Ga0207683_10058633
344 Ga0207428_10000592
345 Ga0207428_10001182
346 Ga0207428_10038713
347 Ga0268265_10209452
348 Ga0307515_10054656
349 Ga0307512_10008219
350 Ga0265320_10015029
351 Ga0265325_10019036
352 Ga0265340_10007213
353 Ga0307513_10042291
354 Ga0307516_10008312
355 Ga0307516_10048653
356 Ga0307406_10053755
357 Ga0307412_10094095
358 Ga0307416_100014943
359 Ga0307415_100003493
360 Ga0373934_0001120
361 Ga0373934_0019620
362 Ga0373936_0001578
363 Ga0373956_0000321
364 Ga0373957_0009242
365 Ga0373955_0000067
366 Ga0373924_0001128
367 Ga0373933_0000174
368 Ga0373937_0000021
369 Ga0373925_0056024
370 Ga0395898_0011354
371 Ga0395905_0010754
372 Ga0395905_0171617
373 Ga0436364_0786034
374 Ga0395901_0002134
375 Ga0436365_1431540
376 Ga0439435_0006807
377 Ga0451577_0001465
378 Ga0451577_0001824
379 Ga0451577_0017439
380 Ga0466969_0008112
381 Ga0466969_0061860
382 Ga0466966_0001722
383 Ga0466963_0022042
384 Ga0453684_0069826
385 Ga0466959_0032725
386 Ga0451576_0006365
387 Ga0451576_0008492
388 Ga0451576_0157713
389 Ga0466967_0022489
390 Ga0466967_0023891
391 Ga0495592_0000013
392 Ga0495638_0008787
393 Ga0495651_0000022
394 Ga0495650_0007579
395 Ga0495650_0015216
396 Ga0495664_0088646
397 Ga0495584_0013817
398 Ga0495606_0014344
399 Ga0495606_0017127
400 Ga0495608_0000029
401 Ga0495608_0101058
402 Ga0495628_0002553
403 Ga0495628_0024627
404 Ga0495630_0027643
405 Ga0495652_0000412
406 Ga0495652_0017873
407 Ga0495665_0002982
408 Ga0495586_0004181
409 Ga0495586_0013255
410 Ga0495587_0000022
411 Ga0495645_0003805
412 Ga0495667_0000028
413 Ga0495625_0001678
414 Ga0495635_0081669
415 Ga0495657_0000036
416 Ga0495599_0000131
417 Ga0495646_0002944
418 Ga0495646_0022103
419 Ga0495624_0005611
420 Ga0495649_0000039
421 Ga0495600_0034717
422 Ga0495604_0000023
423 Ga0495672_0004670
424 Ga0495680_0000232
425 Ga0495680_0015532
426 Ga0495675_0000492
427 Ga0495684_0016813
428 Ga0495593_0009384
429 Ga0495602_0000653
430 Ga0496104_0000469
431 Ga0496108_0002343
432 Ga0496109_0004016
433 Ga0496109_0031114
434 Ga0496112_0102348
435 Ga0496113_0017034
436 Ga0496121_0005680
437 Ga0496124_0010262
438 Ga0496126_0001784
439 Ga0501043_0109640
440 Ga0501072_0030198
441 Ga0501075_0023690
442 Ga0501076_0002357
443 Ga0501079_0018485
444 Ga0501079_0077554
445 Ga0501081_0010276
446 Ga0501083_0017312
447 nmdc:mga03n38_647_c1
448 nmdc:mga00v17_10679_c1
449 nmdc:mga0k408_5929_c1
450 nmdc:mga06z11_30852_c1
451 nmdc:mga06z11_3325_c1
452 nmdc:mga04h51_7683_c1
453 nmdc:mga05p37_431_c1
454 nmdc:mga09592_229_c1
455 nmdc:mga0qj67_13855_c1
456 nmdc:mga06r32_73241_c1
457 nmdc:mga08y16_11947_c1
458 nmdc:mga08y16_21055_c1
459 nmdc:mga08y16_21749_c1
460 nmdc:mga08y16_22374_c1
461 nmdc:mga08y16_2706_c1
462 nmdc:mga0n895_35469_c1
463 Ga0495595_0002286
464 Ga0500647_0007926
465 Ga0500566_0013405
466 Ga0500641_0016313
467 Ga0500572_003325
468 Ga0500595_004630
469 Ga0500642_0000223
470 Ga0500616_0000046
471 Ga0501084_0064571
472 Ga0530510_0011377
473 2621299506
474 2623501028
475 2644290096
476 2817490869
477 3003005369
478 8055883935

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00501

AMP-binding

AMP-binding enzyme

46

424

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wvn-assembly2.cif.gz_B complex structure of vinn with l-aspartate 0.8657 57 474
4wv3-assembly1.cif.gz_A crystal structure of the anthranilate coa ligase auaeii in complex with anthranoyl-amp 0.854 55 623
3wvn-assembly1.cif.gz_A complex structure of vinn with l-aspartate 0.8514 55 488
3wvn-assembly2.cif.gz_B complex structure of vinn with l-aspartate 0.8496 57 474
3wvn-assembly1.cif.gz_A complex structure of vinn with l-aspartate 0.8493 55 488
ID Description Score Start End Superfamily
af_Q4D757_69_185_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8703 92 174 3.40.50.980
af_P9WLU5_29_175_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8691 68 175 3.40.50.980
3wvnB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.8657 57 474 3.40.50.12780
af_A1Z8Z9_13_427_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.8647 52 489 3.40.50.12780
4wv3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.8577 55 489 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A537UJM9-F1-model_v4 Feruloyl-CoA synthase 0.9878 495 635
AF-A0A4R5BCQ0-F1-model_v4 Feruloyl-CoA synthase 0.9716 33 635 GO:0016405
AF-A0A2A5GGG1-F1-model_v4 Feruloyl-CoA synthase 0.9684 91 636 GO:0016405
AF-A0A382GTE0-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9676 34 404 GO:0016405
AF-A0A519GNH2-F1-model_v4 Feruloyl-CoA synthase 0.9669 33 539 GO:0016405

Map