F351793

General Info

Members Datasets Scaffolds Average Seq Length
239 176 230 374

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100030195|Ga0068860_1000301951
Length 425
Sequence LLAPLTGRNLQLFSSLNARGLICGLAKKLGFRLAHPPWALFAEISLQDSDDRPARAGKRLLILGSYAPSLVNFRGPLIAAAVARGHRVFAAAPAIDAGTAEALRALGAEPLSINLARTSLNPFLAARTVSELKALVRKLEPDVIFAYTIKPIVLGARAAGGVPRFVALVTGLGYAFTGGRHPRRLLSRLIAKALYRRAFARASVAIFQNPDDREEFRRLGLLPAGLPTYLVAGSGVDLDLFRPAPLPDQPSFLMIARLLGDKGVREYADAAARLKRAHPGVRLMLAGWLDESPDSIAQSELDDAIACGVEYLGRLDDVRPAIATASVYVLPSYREGTPRSVLEAMAMGRAIITSDAPGCRQTVEKGVNGFLVPPRDADSLYRAMERLVLQPELIAPMGAQSQRMAVERFDARRVAEELLEHAQLS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
3 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
4 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
5 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
6 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
7 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
8 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
9 2904456579 Variovorax sp. 2002 Isolate Unclassified
10 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
11 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
12 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
44 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
45 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
46 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
107 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
163 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
164 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
165 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
166 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
167 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
168 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
171 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
172 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.82
Metatranscriptomes 0.42
Isolates 3.77

Biome Distribution

Category Percentage (%)
Aerial Root 0.42
Bulb 0
Endosphere 8.37
Nodule 0.84
Rhizoplane 0.84
Rhizosphere 77.82
Stem 0
Stem Tuber 0
Unclassified 11.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2612473 2162886007 Bacteria 9531
2 Ga0006562J51391_1090359 3300003578 Bacteria 1440
3 Ga0055540_1001049 3300003792 Bacteria 17597
4 Ga0055531_10016051 3300003794 Bacteria 3257
5 Ga0065704_10000807 3300005289 Bacteria 12184
6 Ga0065712_10147459 3300005290 Bacteria 1397
7 Ga0070658_10073021 3300005327 Bacteria 2813
8 Ga0070683_100008224 3300005329 Bacteria 8862
9 Ga0070670_100001137 3300005331 Bacteria 21140
10 Ga0070660_100002571 3300005339 Bacteria 12445
11 Ga0070660_100005668 3300005339 Bacteria 8652
12 Ga0070660_100047733 3300005339 Bacteria 3286
13 Ga0070689_100022089 3300005340 Bacteria 4748
14 Ga0070661_100009659 3300005344 Bacteria 6687
15 Ga0070675_100034646 3300005354 Bacteria 4099
16 Ga0070675_100067989 3300005354 Bacteria 2949
17 Ga0070675_100175844 3300005354 Unclassified 1848
18 Ga0070688_100020569 3300005365 Bacteria 3839
19 Ga0070659_100005442 3300005366 Bacteria 9144
20 Ga0070701_10011383 3300005438 Bacteria 3974
21 Ga0070711_100070062 3300005439 Unclassified 2468
22 Ga0070679_100017221 3300005530 Bacteria 6990
23 Ga0068853_100064230 3300005539 Bacteria 3182
24 Ga0070665_100020554 3300005548 Bacteria 6634
25 Ga0068855_100095593 3300005563 Bacteria 3424
26 Ga0068857_100001152 3300005577 Bacteria 20627
27 Ga0068857_100003722 3300005577 Bacteria 12801
28 Ga0068856_100151879 3300005614 Bacteria 2325
29 Ga0068856_100341685 3300005614 Bacteria 1515
30 Ga0068852_100039377 3300005616 Bacteria 3979
31 Ga0068864_100012477 3300005618 Bacteria 7026
32 Ga0068864_100075418 3300005618 Bacteria 2944
33 Ga0068858_100182504 3300005842 Bacteria 1982
34 Ga0068860_100030195 3300005843 Bacteria 5213
35 Ga0068860_100116568 3300005843 Bacteria 2556
36 Ga0081538_10062026 3300005981 Bacteria 2135
37 Ga0070717_10057165 3300006028 Bacteria 3224
38 Ga0070717_10144581 3300006028 Bacteria 2053
39 Ga0075365_10044859 3300006038 Bacteria 2898
40 Ga0070712_100294751 3300006175 Bacteria 1311
41 Ga0075366_10064236 3300006195 Bacteria 2183
42 Ga0075429_100019382 3300006880 Bacteria 5893
43 Ga0099826_10000016 3300006948 Bacteria 210934
44 Ga0105251_10007744 3300009011 Bacteria 6553
45 Ga0105244_10002090 3300009036 Bacteria 15359
46 Ga0105250_10001424 3300009092 Bacteria 12916
47 Ga0105245_10050705 3300009098 Bacteria 3720
48 Ga0105248_10340829 3300009177 Unclassified 1688
49 Ga0105248_10367543 3300009177 Bacteria 1619
50 Ga0105238_10027271 3300009551 Bacteria 5820
51 Ga0105249_10007199 3300009553 Bacteria 9715
52 Ga0105249_10441578 3300009553 Bacteria 1339
53 Ga0157373_10000673 3300013100 Bacteria 26718
54 Ga0157373_10041865 3300013100 Bacteria 3276
55 Ga0157373_10156338 3300013100 Bacteria 1604
56 Ga0157371_10002244 3300013102 Bacteria 18660
57 Ga0157370_10009766 3300013104 Bacteria 10182
58 Ga0157370_10092569 3300013104 Bacteria 2837
59 Ga0157370_10123862 3300013104 Bacteria 2413
60 Ga0157369_10000138 3300013105 Bacteria 102776
61 Ga0157369_10001269 3300013105 Bacteria 31339
62 Ga0157369_10011481 3300013105 Bacteria 10059
63 Ga0157369_10061739 3300013105 Bacteria 4040
64 Ga0157369_10068665 3300013105 Bacteria 3808
65 Ga0157369_10076646 3300013105 Bacteria 3584
66 Ga0163163_10003866 3300014325 Bacteria 12755
67 Ga0157380_10027617 3300014326 Bacteria 4317
68 Ga0157379_10154297 3300014968 Bacteria 2071
69 Ga0157376_10000621 3300014969 Bacteria 22961
70 Ga0209676_1025775 3300025292 Bacteria 1879
71 Ga0209051_1000211 3300025303 Bacteria 101426
72 Ga0209257_1000962 3300025304 Bacteria 39559
73 Ga0207696_1001440 3300025711 Bacteria 12919
74 Ga0207655_1000907 3300025728 Bacteria 30900
75 Ga0207713_1012254 3300025735 Bacteria 4600
76 Ga0207705_10238079 3300025909 Bacteria 1386
77 Ga0207707_10078487 3300025912 Bacteria 2883
78 Ga0207657_10003398 3300025919 Bacteria 17013
79 Ga0207657_10010812 3300025919 Bacteria 9081
80 Ga0207657_10138209 3300025919 Bacteria 1992
81 Ga0207649_10018641 3300025920 Bacteria 3952
82 Ga0207652_10267989 3300025921 Bacteria 1540
83 Ga0207694_10016347 3300025924 Bacteria 5602
84 Ga0207659_10075412 3300025926 Bacteria 2475
85 Ga0207659_10160153 3300025926 Unclassified 1766
86 Ga0207687_10158302 3300025927 Bacteria 1735
87 Ga0207664_10379305 3300025929 Unclassified 1255
88 Ga0207690_10008108 3300025932 Bacteria 6231
89 Ga0207689_10169149 3300025942 Bacteria 1801
90 Ga0207661_10219321 3300025944 Bacteria 1680
91 Ga0207679_10001215 3300025945 Bacteria 16395
92 Ga0207667_10048880 3300025949 Bacteria 4471
93 Ga0207651_10117341 3300025960 Unclassified 2011
94 Ga0207712_10009746 3300025961 Bacteria 6086
95 Ga0207708_10132757 3300026075 Bacteria 1948
96 Ga0207702_10125580 3300026078 Bacteria 2303
97 Ga0207676_10017005 3300026095 Bacteria 5268
98 Ga0207674_10000353 3300026116 Bacteria 59263
99 Ga0207674_10001696 3300026116 Bacteria 28241
100 Ga0207698_10012356 3300026142 Bacteria 5584
101 Ga0207698_10028466 3300026142 Bacteria 3984
102 Ga0209282_1000064 3300027666 Bacteria 91973
103 Ga0268266_10375508 3300028379 Bacteria 1340
104 Ga0268264_10020930 3300028381 Bacteria 5344
105 Ga0268264_10115925 3300028381 Bacteria 2354
106 Ga0307517_10014125 3300028786 Bacteria 10766
107 Ga0307515_10008246 3300028794 Bacteria 20365
108 Ga0265328_10002971 3300031239 Bacteria 7572
109 Ga0265331_10005701 3300031250 Bacteria 7470
110 Ga0265327_10014979 3300031251 Bacteria 5041
111 Ga0265316_10027084 3300031344 Bacteria 4754
112 Ga0307509_10000040 3300031507 Bacteria 184460
113 Ga0307509_10128263 3300031507 Bacteria 2498
114 Ga0307408_100063464 3300031548 Bacteria 2702
115 Ga0307516_10000029 3300031730 Bacteria 159762
116 Ga0307516_10110983 3300031730 Bacteria 2545
117 Ga0307405_10065784 3300031731 Bacteria 2309
118 Ga0307413_10006219 3300031824 Bacteria 5422
119 Ga0307413_10102487 3300031824 Bacteria 1895
120 Ga0307410_10064967 3300031852 Bacteria 2509
121 Ga0307406_10093545 3300031901 Bacteria 2030
122 Ga0307407_10003270 3300031903 Bacteria 6602
123 Ga0307412_10014895 3300031911 Bacteria 4597
124 Ga0307412_10159974 3300031911 Bacteria 1672
125 Ga0307409_100128293 3300031995 Bacteria 2162
126 Ga0307409_100199580 3300031995 Bacteria 1788
127 Ga0307414_10013510 3300032004 Bacteria 4864
128 Ga0307414_10021774 3300032004 Bacteria 4032
129 Ga0307411_10012180 3300032005 Bacteria 4678
130 Ga0307411_10016088 3300032005 Bacteria 4226
131 Ga0307411_10052070 3300032005 Bacteria 2675
132 Ga0307411_10061220 3300032005 Bacteria 2505
133 Ga0307411_10085589 3300032005 Bacteria 2184
134 Ga0373961_0000146 3300035241 Bacteria 34486
135 Ga0395899_0034887 3300037312 Bacteria 3777
136 Ga0395900_0009424 3300037418 Bacteria 10008
137 Ga0395900_0088082 3300037418 Bacteria 3191
138 Ga0395898_0051907 3300037466 Bacteria 4007
139 Ga0395898_0055241 3300037466 Bacteria 3873
140 Ga0395905_0026612 3300037471 Bacteria 5454
141 Ga0395905_0049586 3300037471 Bacteria 3934
142 Ga0395905_0067097 3300037471 Bacteria 3360
143 Ga0395905_0181638 3300037471 Bacteria 1975
144 Ga0395901_0013234 3300038443 Bacteria 8377
145 Ga0395901_0029277 3300038443 Bacteria 5669
146 Ga0395901_0190518 3300038443 Bacteria 2151
147 Ga0395901_0283972 3300038443 Bacteria 1719
148 Ga0400489_65027 3300039093 Unclassified 1547
149 Ga0466961_0015768 3300044693 Bacteria 4848
150 Ga0466963_0002526 3300044694 Bacteria 10242
151 Ga0466963_0019680 3300044694 Bacteria 4237
152 Ga0466963_0136764 3300044694 Unclassified 1696
153 Ga0466957_0008440 3300044842 Bacteria 5860
154 Ga0451576_0054335 3300045051 Bacteria 4194
155 Ga0466958_0055669 3300045836 Bacteria 2400
156 Ga0466958_0203480 3300045836 Bacteria 1260
157 Ga0466967_0273361 3300045976 Bacteria 1619
158 Ga0466967_0395383 3300045976 Bacteria 1344
159 Ga0495605_0001687 3300046474 Bacteria 14182
160 Ga0495606_0000767 3300046507 Bacteria 49266
161 Ga0495616_0012392 3300046513 Bacteria 4843
162 Ga0495631_0012241 3300046518 Bacteria 4198
163 Ga0495648_0065531 3300046524 Bacteria 2135
164 Ga0495625_0010449 3300046660 Bacteria 7681
165 Ga0495670_0008545 3300046691 Bacteria 5041
166 Ga0496102_0067156 3300048905 Bacteria 3289
167 Ga0496112_0140485 3300048915 Bacteria 2385
168 Ga0496116_0000332 3300048919 Bacteria 76047
169 Ga0496116_0007774 3300048919 Bacteria 9429
170 Ga0496119_0001755 3300048922 Bacteria 25287
171 Ga0496120_0001679 3300048923 Bacteria 25413
172 Ga0496122_0002378 3300048925 Bacteria 26937
173 Ga0496123_0001886 3300048926 Bacteria 27354
174 Ga0496124_0004571 3300048927 Bacteria 16071
175 Ga0496125_0000288 3300048928 Bacteria 99681
176 Ga0496125_0001628 3300048928 Bacteria 31643
177 Ga0496125_0002272 3300048928 Bacteria 25486
178 Ga0496125_0002296 3300048928 Bacteria 25264
179 Ga0496126_0002206 3300048929 Bacteria 26966
180 Ga0501031_0010533 3300049568 Bacteria 6020
181 Ga0501033_0028861 3300049570 Bacteria 4169
182 Ga0501034_0000022 3300049571 Bacteria 264441
183 Ga0501034_0388172 3300049571 Bacteria 1320
184 Ga0501037_0091834 3300049573 Bacteria 2196
185 Ga0501037_0259133 3300049573 Bacteria 1215
186 Ga0501039_0002567 3300049575 Bacteria 13557
187 Ga0501039_0041761 3300049575 Bacteria 3543
188 Ga0501040_0065116 3300049576 Bacteria 2510
189 Ga0501040_0097865 3300049576 Bacteria 2044
190 Ga0501041_0007378 3300049577 Bacteria 6457
191 Ga0501042_0006822 3300049578 Bacteria 7447
192 Ga0501042_0061225 3300049578 Bacteria 2689
193 Ga0501043_0021928 3300049579 Bacteria 5008
194 Ga0501043_0113467 3300049579 Bacteria 2128
195 Ga0501046_0087958 3300049580 Bacteria 2393
196 Ga0501047_0019102 3300049581 Bacteria 6576
197 Ga0501048_0016583 3300049582 Bacteria 5431
198 Ga0501048_0019135 3300049582 Bacteria 5029
199 Ga0501068_0081162 3300049584 Bacteria 1991
200 Ga0501071_0029851 3300049587 Bacteria 3851
201 Ga0501072_0002389 3300049588 Bacteria 14072
202 Ga0501073_0125557 3300049589 Bacteria 1779
203 Ga0501075_0002619 3300049591 Bacteria 12014
204 Ga0501076_0022695 3300049592 Bacteria 4825
205 Ga0501076_0094786 3300049592 Bacteria 2403
206 Ga0501077_0167075 3300049593 Bacteria 1398
207 Ga0501079_0256554 3300049741 Bacteria 1366
208 Ga0501081_0100226 3300049743 Bacteria 2047
209 Ga0501035_0159107 3300049822 Bacteria 1956
210 Ga0501045_0017758 3300049824 Bacteria 5051
211 nmdc:mga0yw44_57573_c1 3300050492 Bacteria 2371
212 nmdc:mga09592_8259_c1 3300050508 Bacteria 8468
213 Ga0500647_0032895 3300053091 Bacteria 2471
214 Ga0500566_0012392 3300053094 Bacteria 5022
215 Ga0500640_026917 3300053095 Bacteria 2506
216 Ga0500554_001257 3300053102 Bacteria 4906
217 Ga0500595_000015 3300053119 Bacteria 224592
218 Ga0500595_000823 3300053119 Bacteria 17861
219 Ga0500597_041347 3300053120 Bacteria 1940
220 Ga0500614_001123 3300053123 Bacteria 6589
221 Ga0500616_0061506 3300053153 Bacteria 1943
222 Ga0500630_038548 3300053159 Bacteria 2334
223 Ga0500639_004064 3300053163 Bacteria 7426
224 Ga0500601_001087 3300053737 Bacteria 3075
225 Ga0501084_0020667 3300054114 Bacteria 5491
226 Ga0501082_0033450 3300060353 Bacteria 4436
227 Ga0501082_0036367 3300060353 Bacteria 4242
228 Ga0501082_0108115 3300060353 Bacteria 2407
229 Ga0466962_0019507 3300061719 Bacteria 3259
230 Ga0530510_0046264 3300061734 Bacteria 3143

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053119 Ga0500595_000823 Ga0500595_000823_8959_10086 341
2 3300032005 Ga0307411_10061220 Ga0307411_100612202 342
3 3300014969 Ga0157376_10000621 Ga0157376_1000062110 348
4 3300048928 Ga0496125_0002272 Ga0496125_0002272_11578_12750 350
5 3300048929 Ga0496126_0002206 Ga0496126_0002206_13125_14297 350
6 3300049822 Ga0501035_0159107 Ga0501035_0159107_388_1518 350
7 3300005618 Ga0068864_100012477 Ga0068864_1000124773 351
8 3300026095 Ga0207676_10017005 Ga0207676_100170052 351
9 3300009098 Ga0105245_10050705 Ga0105245_100507053 352
10 3300025927 Ga0207687_10158302 Ga0207687_101583022 353
11 3300006195 Ga0075366_10064236 Ga0075366_100642362 354
12 3300006948 Ga0099826_10000016 Ga0099826_1000001690 354
13 3300013105 Ga0157369_10001269 Ga0157369_100012699 354
14 3300027666 Ga0209282_1000064 Ga0209282_100006443 354
15 3300049581 Ga0501047_0019102 Ga0501047_0019102_5384_6556 354
16 3300053091 Ga0500647_0032895 Ga0500647_0032895_920_2059 355
17 3300053094 Ga0500566_0012392 Ga0500566_0012392_2214_3353 355
18 3300053095 Ga0500640_026917 Ga0500640_026917_626_1765 355
19 3300053102 Ga0500554_001257 Ga0500554_001257_1990_3129 355
20 3300053119 Ga0500595_000015 Ga0500595_000015_99842_100981 355
21 3300053120 Ga0500597_041347 Ga0500597_041347_39_1178 355
22 3300053123 Ga0500614_001123 Ga0500614_001123_5000_6139 355
23 3300053737 Ga0500601_001087 Ga0500601_001087_169_1308 355
24 3300013105 Ga0157369_10000138 Ga0157369_1000013866 357
25 3300046474 Ga0495605_0001687 Ga0495605_0001687_4970_6088 358
26 3300046513 Ga0495616_0012392 Ga0495616_0012392_3662_4780 358
27 3300046524 Ga0495648_0065531 Ga0495648_0065531_376_1494 358
28 3300048919 Ga0496116_0007774 Ga0496116_0007774_3758_4876 358
29 3300049571 Ga0501034_0000022 Ga0501034_0000022_141614_142732 361
30 3300003792 Ga0055540_1001049 Ga0055540_100104915 362
31 3300025292 Ga0209676_1025775 Ga0209676_10257752 362
32 3300025303 Ga0209051_1000211 Ga0209051_100021154 362
33 3300031507 Ga0307509_10128263 Ga0307509_101282633 362
34 3300013105 Ga0157369_10061739 Ga0157369_100617392 363
35 3300031730 Ga0307516_10000029 Ga0307516_1000002958 363
36 3300035241 Ga0373961_0000146 Ga0373961_0000146_18559_19701 363
37 3300053159 Ga0500630_038548 Ga0500630_038548_36_1187 363
38 3300053163 Ga0500639_004064 Ga0500639_004064_5223_6374 363
39 3300049589 Ga0501073_0125557 Ga0501073_0125557_270_1400 365
40 iso_pu_bacteria 2740891818 2740992387 366
41 3300003794 Ga0055531_10016051 Ga0055531_100160512 367
42 3300025304 Ga0209257_1000962 Ga0209257_10009624 367
43 3300048915 Ga0496112_0140485 Ga0496112_0140485_1048_2163 367
44 3300025929 Ga0207664_10379305 Ga0207664_103793052 368
45 3300031901 Ga0307406_10093545 Ga0307406_100935452 368
46 3300039093 Ga0400489_65027 Ga0400489_65027_123_1298 368
47 3300044693 Ga0466961_0015768 Ga0466961_0015768_1928_3034 368
48 3300045051 Ga0451576_0054335 Ga0451576_0054335_553_1683 368
49 3300045836 Ga0466958_0203480 Ga0466958_0203480_63_1169 368
50 iso_pu_bacteria 2904456579 2904457312 368
51 3300005339 Ga0070660_100047733 Ga0070660_1000477332 369
52 3300005354 Ga0070675_100067989 Ga0070675_1000679892 369
53 3300005563 Ga0068855_100095593 Ga0068855_1000955932 369
54 3300005577 Ga0068857_100003722 Ga0068857_1000037225 369
55 3300006038 Ga0075365_10044859 Ga0075365_100448593 369
56 3300009551 Ga0105238_10027271 Ga0105238_100272714 369
57 3300013100 Ga0157373_10041865 Ga0157373_100418652 369
58 3300013105 Ga0157369_10076646 Ga0157369_100766462 369
59 3300014326 Ga0157380_10027617 Ga0157380_100276172 369
60 3300025919 Ga0207657_10010812 Ga0207657_100108128 369
61 3300025924 Ga0207694_10016347 Ga0207694_100163474 369
62 3300025926 Ga0207659_10075412 Ga0207659_100754122 369
63 3300025949 Ga0207667_10048880 Ga0207667_100488804 369
64 3300026116 Ga0207674_10001696 Ga0207674_1000169622 369
65 3300031239 Ga0265328_10002971 Ga0265328_100029713 369
66 3300031250 Ga0265331_10005701 Ga0265331_100057014 369
67 3300031251 Ga0265327_10014979 Ga0265327_100149794 369
68 3300031344 Ga0265316_10027084 Ga0265316_100270844 369
69 3300031995 Ga0307409_100128293 Ga0307409_1001282932 369
70 3300049582 Ga0501048_0019135 Ga0501048_0019135_1090_2220 369
71 3300049592 Ga0501076_0094786 Ga0501076_0094786_962_2092 369
72 3300050492 nmdc:mga0yw44_57573_c1 nmdc:mga0yw44_57573_c1_159_1274 369
73 3300053153 Ga0500616_0061506 Ga0500616_0061506_506_1621 369
74 iso_pu_bacteria 2643221571 2643870965 369
75 iso_pu_bacteria 2738541265 2738670396 369
76 iso_pu_bacteria 2738541282 2738748789 369
77 iso_pu_bacteria 2738541303 2738857831 369
78 3300005843 Ga0068860_100116568 Ga0068860_1001165682 370
79 3300006028 Ga0070717_10057165 Ga0070717_100571651 370
80 3300013102 Ga0157371_10002244 Ga0157371_100022446 370
81 3300013104 Ga0157370_10009766 Ga0157370_100097668 370
82 3300028381 Ga0268264_10115925 Ga0268264_101159252 370
83 3300032004 Ga0307414_10021774 Ga0307414_100217744 370
84 3300032005 Ga0307411_10016088 Ga0307411_100160885 370
85 3300032005 Ga0307411_10085589 Ga0307411_100855893 370
86 3300031852 Ga0307410_10064967 Ga0307410_100649672 371
87 3300031911 Ga0307412_10159974 Ga0307412_101599742 371
88 3300031995 Ga0307409_100199580 Ga0307409_1001995802 371
89 3300032004 Ga0307414_10013510 Ga0307414_100135102 371
90 3300032005 Ga0307411_10012180 Ga0307411_100121803 371
91 3300037466 Ga0395898_0051907 Ga0395898_0051907_2655_3776 371
92 3300037471 Ga0395905_0067097 Ga0395905_0067097_321_1442 371
93 3300048927 Ga0496124_0004571 Ga0496124_0004571_13321_14490 371
94 3300048928 Ga0496125_0000288 Ga0496125_0000288_1713_2864 371
95 3300003578 Ga0006562J51391_1090359 Ga0006562J51391_10903591 372
96 3300005327 Ga0070658_10073021 Ga0070658_100730214 372
97 3300005339 Ga0070660_100002571 Ga0070660_1000025717 372
98 3300005344 Ga0070661_100009659 Ga0070661_1000096596 372
99 3300005354 Ga0070675_100034646 Ga0070675_1000346462 372
100 3300005530 Ga0070679_100017221 Ga0070679_1000172213 372
101 3300005539 Ga0068853_100064230 Ga0068853_1000642304 372
102 3300005614 Ga0068856_100151879 Ga0068856_1001518792 372
103 3300005842 Ga0068858_100182504 Ga0068858_1001825042 372
104 3300005981 Ga0081538_10062026 Ga0081538_100620262 372
105 3300006028 Ga0070717_10144581 Ga0070717_101445812 372
106 3300009177 Ga0105248_10340829 Ga0105248_103408291 372
107 3300013100 Ga0157373_10156338 Ga0157373_101563381 372
108 3300013105 Ga0157369_10011481 Ga0157369_100114819 372
109 3300014968 Ga0157379_10154297 Ga0157379_101542972 372
110 3300025909 Ga0207705_10238079 Ga0207705_102380791 372
111 3300025919 Ga0207657_10003398 Ga0207657_100033989 372
112 3300026078 Ga0207702_10125580 Ga0207702_101255802 372
113 3300026142 Ga0207698_10012356 Ga0207698_100123565 372
114 3300032005 Ga0307411_10052070 Ga0307411_100520702 372
115 3300037312 Ga0395899_0034887 Ga0395899_0034887_520_1647 372
116 3300037418 Ga0395900_0088082 Ga0395900_0088082_754_1881 372
117 3300037466 Ga0395898_0055241 Ga0395898_0055241_742_1869 372
118 3300037471 Ga0395905_0049586 Ga0395905_0049586_2563_3690 372
119 3300037471 Ga0395905_0181638 Ga0395905_0181638_68_1210 372
120 3300038443 Ga0395901_0013234 Ga0395901_0013234_68_1195 372
121 3300038443 Ga0395901_0190518 Ga0395901_0190518_497_1624 372
122 3300038443 Ga0395901_0283972 Ga0395901_0283972_252_1424 372
123 3300044694 Ga0466963_0002526 Ga0466963_0002526_5043_6170 372
124 3300044694 Ga0466963_0136764 Ga0466963_0136764_233_1363 372
125 3300048905 Ga0496102_0067156 Ga0496102_0067156_850_1968 372
126 3300048919 Ga0496116_0000332 Ga0496116_0000332_34957_36075 372
127 3300049568 Ga0501031_0010533 Ga0501031_0010533_4274_5392 372
128 3300049570 Ga0501033_0028861 Ga0501033_0028861_171_1289 372
129 3300049573 Ga0501037_0091834 Ga0501037_0091834_118_1236 372
130 3300049575 Ga0501039_0002567 Ga0501039_0002567_5606_6724 372
131 3300049576 Ga0501040_0065116 Ga0501040_0065116_153_1274 372
132 3300049576 Ga0501040_0097865 Ga0501040_0097865_176_1294 372
133 3300049577 Ga0501041_0007378 Ga0501041_0007378_580_1698 372
134 3300049578 Ga0501042_0006822 Ga0501042_0006822_1555_2673 372
135 3300049579 Ga0501043_0021928 Ga0501043_0021928_1967_3085 372
136 3300049580 Ga0501046_0087958 Ga0501046_0087958_805_1923 372
137 3300049582 Ga0501048_0016583 Ga0501048_0016583_1604_2722 372
138 3300049584 Ga0501068_0081162 Ga0501068_0081162_54_1172 372
139 3300049588 Ga0501072_0002389 Ga0501072_0002389_10150_11268 372
140 3300049592 Ga0501076_0022695 Ga0501076_0022695_181_1299 372
141 3300049593 Ga0501077_0167075 Ga0501077_0167075_231_1352 372
142 3300049741 Ga0501079_0256554 Ga0501079_0256554_170_1288 372
143 3300049743 Ga0501081_0100226 Ga0501081_0100226_752_1870 372
144 3300049824 Ga0501045_0017758 Ga0501045_0017758_3424_4542 372
145 3300054114 Ga0501084_0020667 Ga0501084_0020667_3491_4609 372
146 3300060353 Ga0501082_0033450 Ga0501082_0033450_3227_4345 372
147 3300060353 Ga0501082_0108115 Ga0501082_0108115_709_1827 372
148 3300061734 Ga0530510_0046264 Ga0530510_0046264_276_1394 372
149 3300005290 Ga0065712_10147459 Ga0065712_101474591 373
150 3300005340 Ga0070689_100022089 Ga0070689_1000220892 373
151 3300005354 Ga0070675_100175844 Ga0070675_1001758441 373
152 3300005365 Ga0070688_100020569 Ga0070688_1000205693 373
153 3300005438 Ga0070701_10011383 Ga0070701_100113833 373
154 3300005843 Ga0068860_100030195 Ga0068860_1000301951 373
155 3300009553 Ga0105249_10007199 Ga0105249_100071997 373
156 3300013100 Ga0157373_10000673 Ga0157373_1000067315 373
157 3300025926 Ga0207659_10160153 Ga0207659_101601532 373
158 3300025942 Ga0207689_10169149 Ga0207689_101691492 373
159 3300025960 Ga0207651_10117341 Ga0207651_101173411 373
160 3300025961 Ga0207712_10009746 Ga0207712_100097463 373
161 3300026075 Ga0207708_10132757 Ga0207708_101327572 373
162 3300028381 Ga0268264_10020930 Ga0268264_100209302 373
163 3300028786 Ga0307517_10014125 Ga0307517_100141252 373
164 3300028794 Ga0307515_10008246 Ga0307515_1000824612 373
165 3300031824 Ga0307413_10102487 Ga0307413_101024872 373
166 3300037418 Ga0395900_0009424 Ga0395900_0009424_1696_2817 373
167 3300044694 Ga0466963_0019680 Ga0466963_0019680_2110_3255 373
168 3300044842 Ga0466957_0008440 Ga0466957_0008440_4574_5719 373
169 3300045836 Ga0466958_0055669 Ga0466958_0055669_899_2044 373
170 3300045976 Ga0466967_0273361 Ga0466967_0273361_443_1588 373
171 3300046507 Ga0495606_0000767 Ga0495606_0000767_25388_26509 373
172 3300046518 Ga0495631_0012241 Ga0495631_0012241_2954_4075 373
173 3300046660 Ga0495625_0010449 Ga0495625_0010449_5879_7003 373
174 3300046691 Ga0495670_0008545 Ga0495670_0008545_3000_4124 373
175 3300048922 Ga0496119_0001755 Ga0496119_0001755_14715_15842 373
176 3300048923 Ga0496120_0001679 Ga0496120_0001679_14713_15840 373
177 3300048925 Ga0496122_0002378 Ga0496122_0002378_10544_11671 373
178 3300048926 Ga0496123_0001886 Ga0496123_0001886_15298_16425 373
179 3300048928 Ga0496125_0001628 Ga0496125_0001628_15214_16341 373
180 3300048928 Ga0496125_0002296 Ga0496125_0002296_9424_10551 373
181 3300061719 Ga0466962_0019507 Ga0466962_0019507_1561_2706 373
182 3300005329 Ga0070683_100008224 Ga0070683_1000082242 374
183 3300005331 Ga0070670_100001137 Ga0070670_10000113712 374
184 3300005366 Ga0070659_100005442 Ga0070659_1000054422 374
185 3300005439 Ga0070711_100070062 Ga0070711_1000700622 374
186 3300005548 Ga0070665_100020554 Ga0070665_1000205544 374
187 3300005577 Ga0068857_100001152 Ga0068857_10000115214 374
188 3300005614 Ga0068856_100341685 Ga0068856_1003416852 374
189 3300005616 Ga0068852_100039377 Ga0068852_1000393772 374
190 3300005618 Ga0068864_100075418 Ga0068864_1000754182 374
191 3300006175 Ga0070712_100294751 Ga0070712_1002947512 374
192 3300009177 Ga0105248_10367543 Ga0105248_103675432 374
193 3300013105 Ga0157369_10068665 Ga0157369_100686652 374
194 3300014325 Ga0163163_10003866 Ga0163163_100038668 374
195 3300025912 Ga0207707_10078487 Ga0207707_100784872 374
196 3300025921 Ga0207652_10267989 Ga0207652_102679892 374
197 3300025932 Ga0207690_10008108 Ga0207690_100081082 374
198 3300025944 Ga0207661_10219321 Ga0207661_102193212 374
199 3300025945 Ga0207679_10001215 Ga0207679_100012152 374
200 3300026116 Ga0207674_10000353 Ga0207674_1000035315 374
201 3300026142 Ga0207698_10028466 Ga0207698_100284663 374
202 3300028379 Ga0268266_10375508 Ga0268266_103755081 374
203 3300031507 Ga0307509_10000040 Ga0307509_1000004067 374
204 3300031548 Ga0307408_100063464 Ga0307408_1000634642 374
205 3300031731 Ga0307405_10065784 Ga0307405_100657842 374
206 3300031824 Ga0307413_10006219 Ga0307413_100062196 374
207 3300031903 Ga0307407_10003270 Ga0307407_100032702 374
208 3300031911 Ga0307412_10014895 Ga0307412_100148951 374
209 3300049571 Ga0501034_0388172 Ga0501034_0388172_39_1175 374
210 3300005339 Ga0070660_100005668 Ga0070660_1000056684 375
211 3300006880 Ga0075429_100019382 Ga0075429_1000193822 375
212 3300025920 Ga0207649_10018641 Ga0207649_100186412 375
213 3300045976 Ga0466967_0395383 Ga0466967_0395383_16_1152 375
214 3300049573 Ga0501037_0259133 Ga0501037_0259133_55_1185 375
215 3300049575 Ga0501039_0041761 Ga0501039_0041761_1306_2436 375
216 3300049578 Ga0501042_0061225 Ga0501042_0061225_629_1759 375
217 3300049579 Ga0501043_0113467 Ga0501043_0113467_489_1619 375
218 3300049587 Ga0501071_0029851 Ga0501071_0029851_359_1489 375
219 3300049591 Ga0501075_0002619 Ga0501075_0002619_6466_7596 375
220 3300050508 nmdc:mga09592_8259_c1 nmdc:mga09592_8259_c1_7117_8262 375
221 3300060353 Ga0501082_0036367 Ga0501082_0036367_1639_2769 375
222 iso_pu_bacteria 2744054655 2745159414 375
223 iso_pu_bacteria 2773857770 2774439701 375
224 iso_pu_bacteria 2984568884 2984571365 375
225 3300031730 Ga0307516_10110983 Ga0307516_101109832 377
226 3300009553 Ga0105249_10441578 Ga0105249_104415781 378
227 3300037471 Ga0395905_0026612 Ga0395905_0026612_2058_3239 379
228 3300038443 Ga0395901_0029277 Ga0395901_0029277_1759_2940 379
229 3300009011 Ga0105251_10007744 Ga0105251_100077445 380
230 3300009036 Ga0105244_10002090 Ga0105244_1000209014 380
231 3300013104 Ga0157370_10092569 Ga0157370_100925692 380
232 3300025728 Ga0207655_1000907 Ga0207655_10009077 380
233 3300025735 Ga0207713_1012254 Ga0207713_10122542 380
234 3300025919 Ga0207657_10138209 Ga0207657_101382092 380
235 2162886007 SwRhRL2b_contig_2612473 SwRhRL2b_0912.00000550 387
236 3300005289 Ga0065704_10000807 Ga0065704_100008078 387
237 3300009092 Ga0105250_10001424 Ga0105250_1000142410 387
238 3300013104 Ga0157370_10123862 Ga0157370_101238623 387
239 3300025711 Ga0207696_1001440 Ga0207696_100144010 387

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

249

390

0.92

PF00534

Glycos_transf_1

Glycosyl transferases group 1

238

404

0.9

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

74

230

0.84

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

77

239

0.83

PF13477

Glyco_trans_4_2

Glycosyl transferase 4-like

73

209

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8424 210 368
7vfm-assembly1.cif.gz_A crystal structure of sdgb (udp and sd peptide-binding form) 0.8402 79 386
7vfn-assembly2.cif.gz_C crystal structure of sdgb (sd peptide-binding form) 0.8389 79 386
7ec6-assembly1.cif.gz_A crystal structure of sdgb (complexed with peptides) 0.8378 79 386
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8295 190 373
ID Description Score Start End Superfamily
af_Q4D163_355_523_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8949 212 365 3.40.50.2000
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8945 210 371 3.40.50.2000
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.894 210 368 3.40.50.2000
af_Q58577_179_333_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8938 211 368 3.40.50.2000
af_Q9SSP6_536_651_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8881 262 371 3.40.50.2000
ID Description Score Start End GO Terms
AF-X0WBV1-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9608 196 387 GO:0016757
AF-A0A519G706-F1-model_v4 deleted 0.9522 6 385
AF-A0A5J4E0X5-F1-model_v4 N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase (EC 2.4.1.290) 0.9518 62 385 GO:0102335
AF-A0A645FN05-F1-model_v4 Glycosyltransferase Gtf1 (EC 2.4.1.-) 0.9476 120 385 GO:0016757
AF-A0A848VLA0-F1-model_v4 Glycosyltransferase family 4 protein 0.9437 7 385 GO:0016758

Feature Viewer

pLDDT pTM Quality
92.68 0.89 High
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Predicted Structure (AlphaFold2)

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