F351082

General Info

Members Datasets Scaffolds Average Seq Length
238 113 476 165

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10004970|Ga0265327_100049703
Length 194
Sequence VSSRLILAAAFDGMAPATTVAAMTYKKIVMEPDKKIALVAHDHKKRDLIEWAKFNRDLLAHHQVYATGTTGQMLEEELGFPIIKLQSGPLGGDQQIGAKIVEGAINFLIFFWDPLEPQPHDPDVKALLRMAVVWNIPIACDRASADFMISSPLMDKRYARLVPDYDVYRQRAIPAAEPAKPAAPEWSETRKPAA

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
65 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
66 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
67 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
68 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
72 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
79 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
80 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
84 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
89 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
90 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
91 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
96 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
97 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.74
Metatranscriptomes 0.84
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.48
Stem 0
Stem Tuber 0
Unclassified 7.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10004970 3300031251 Bacteria 11420
2 MRS1b_contig_2555168 2162886011 Bacteria 847
3 rootH1_10139582 3300003323 Bacteria 3913
4 rootH1_10314724 3300003323 Bacteria 1697
5 Ga0065704_10038656 3300005289 Bacteria 1054
6 Ga0065704_10213119 3300005289 Bacteria 1101
7 Ga0065715_10589314 3300005293 Bacteria 715
8 Ga0065707_10006450 3300005295 Bacteria 3739
9 Ga0065707_10085571 3300005295 Bacteria 6044
10 Ga0065707_10101781 3300005295 Bacteria 2845
11 Ga0065707_10215457 3300005295 Unclassified 1231
12 Ga0070683_100007164 3300005329 Bacteria 9405
13 Ga0070683_100011978 3300005329 Bacteria 7524
14 Ga0070670_100967444 3300005331 Bacteria 773
15 Ga0070689_100141243 3300005340 Unclassified 1937
16 Ga0070689_100350102 3300005340 Bacteria 1239
17 Ga0070689_100627235 3300005340 Bacteria 933
18 Ga0070689_102145618 3300005340 Bacteria 512
19 Ga0070700_100170165 3300005441 Bacteria 1508
20 Ga0070708_100000510 3300005445 Bacteria 29212
21 Ga0070706_101095266 3300005467 Bacteria 733
22 Ga0070707_100013829 3300005468 Bacteria 7557
23 Ga0070707_100130518 3300005468 Bacteria 2444
24 Ga0070698_100050628 3300005471 Bacteria 4233
25 Ga0070699_100019874 3300005518 Bacteria 5790
26 Ga0070679_100005992 3300005530 Bacteria 11304
27 Ga0068853_100032616 3300005539 Bacteria 4413
28 Ga0068853_100269152 3300005539 Bacteria 1568
29 Ga0070686_100442664 3300005544 Bacteria 997
30 Ga0070686_100501058 3300005544 Bacteria 942
31 Ga0068857_100532819 3300005577 Bacteria 1105
32 Ga0068856_100052438 3300005614 Bacteria 4022
33 Ga0070702_101307834 3300005615 Bacteria 589
34 Ga0068852_100247746 3300005616 Bacteria 1706
35 Ga0068859_100108183 3300005617 Bacteria 2841
36 Ga0068859_100236198 3300005617 Bacteria 1917
37 Ga0068864_100391177 3300005618 Bacteria 1320
38 Ga0068864_101280902 3300005618 Bacteria 733
39 Ga0068870_10164702 3300005840 Bacteria 1318
40 Ga0068870_10294128 3300005840 Bacteria 1023
41 Ga0068860_100955615 3300005843 Bacteria 874
42 Ga0068860_102623882 3300005843 Bacteria 523
43 Ga0068862_100028617 3300005844 Bacteria 4693
44 Ga0075430_100255736 3300006846 Bacteria 1451
45 Ga0075431_100351152 3300006847 Unclassified 1483
46 Ga0075431_101198766 3300006847 Bacteria 722
47 Ga0075433_10851545 3300006852 Bacteria 796
48 Ga0075434_100969093 3300006871 Bacteria 865
49 Ga0075429_100157969 3300006880 Bacteria 1985
50 Ga0097620_100108182 3300006931 Bacteria 2841
51 Ga0097620_100236202 3300006931 Bacteria 1917
52 Ga0099794_10160594 3300007265 Bacteria 1143
53 Ga0111539_11036310 3300009094 Bacteria 954
54 Ga0114129_10230506 3300009147 Bacteria 2494
55 Ga0114129_10642866 3300009147 Bacteria 1370
56 Ga0114129_10758255 3300009147 Unclassified 1242
57 Ga0114129_10918871 3300009147 Bacteria 1108
58 Ga0105243_12719005 3300009148 Bacteria 535
59 Ga0105249_10290507 3300009553 Bacteria 1636
60 Ga0105246_10010247 3300011119 Bacteria 5790
61 Ga0105246_10413063 3300011119 Bacteria 1124
62 Ga0157378_10946706 3300013297 Bacteria 894
63 Ga0163163_10279108 3300014325 Bacteria 1722
64 Ga0157376_10568127 3300014969 Bacteria 1125
65 Ga0207643_10125190 3300025908 Bacteria 1526
66 Ga0207643_10234981 3300025908 Bacteria 1125
67 Ga0207684_10874062 3300025910 Bacteria 757
68 Ga0207662_10790812 3300025918 Bacteria 668
69 Ga0207652_10010676 3300025921 Bacteria 7396
70 Ga0207646_10102400 3300025922 Bacteria 2567
71 Ga0207646_10145660 3300025922 Bacteria 2134
72 Ga0207670_10288985 3300025936 Unclassified 1280
73 Ga0207711_10480789 3300025941 Bacteria 1157
74 Ga0207661_10008729 3300025944 Bacteria 7248
75 Ga0207661_10039521 3300025944 Bacteria 3703
76 Ga0207712_10250897 3300025961 Bacteria 1430
77 Ga0207639_10099294 3300026041 Bacteria 2349
78 Ga0207639_10277057 3300026041 Bacteria 1474
79 Ga0207708_10389528 3300026075 Bacteria 1150
80 Ga0207676_10083476 3300026095 Bacteria 2602
81 Ga0207676_11105211 3300026095 Bacteria 784
82 Ga0207674_10322043 3300026116 Bacteria 1495
83 Ga0207674_11257775 3300026116 Bacteria 710
84 Ga0207675_100176435 3300026118 Bacteria 2044
85 Ga0207683_10295611 3300026121 Bacteria 1481
86 Ga0209588_1019773 3300027671 Unclassified 2105
87 Ga0268265_10414883 3300028380 Unclassified 1248
88 Ga0268264_10800298 3300028381 Bacteria 942
89 Ga0268264_12491831 3300028381 Bacteria 523
90 Ga0265337_1014356 3300028556 Bacteria 2627
91 Ga0265337_1020495 3300028556 Bacteria 2071
92 Ga0265337_1063388 3300028556 Bacteria 1021
93 Ga0265326_10012433 3300028558 Unclassified 2502
94 Ga0265319_1000185 3300028563 Bacteria 47249
95 Ga0265319_1000302 3300028563 Bacteria 36694
96 Ga0265319_1009358 3300028563 Bacteria 4181
97 Ga0265319_1012512 3300028563 Bacteria 3428
98 Ga0265319_1015658 3300028563 Bacteria 2933
99 Ga0265319_1053096 3300028563 Bacteria 1332
100 Ga0265319_1062713 3300028563 Bacteria 1203
101 Ga0265334_10065885 3300028573 Bacteria 1357
102 Ga0265318_10000745 3300028577 Bacteria 21707
103 Ga0265318_10000907 3300028577 Bacteria 19310
104 Ga0265318_10000913 3300028577 Bacteria 19264
105 Ga0265318_10002633 3300028577 Bacteria 9469
106 Ga0265318_10008184 3300028577 Bacteria 4673
107 Ga0265318_10065358 3300028577 Bacteria 1353
108 Ga0265318_10165050 3300028577 Bacteria 812
109 Ga0265323_10001822 3300028653 Bacteria 10114
110 Ga0265323_10018847 3300028653 Bacteria 2666
111 Ga0265323_10021416 3300028653 Bacteria 2476
112 Ga0265323_10029068 3300028653 Bacteria 2070
113 Ga0265323_10042357 3300028653 Bacteria 1649
114 Ga0265323_10058240 3300028653 Bacteria 1350
115 Ga0265322_10006621 3300028654 Bacteria 3405
116 Ga0265322_10025524 3300028654 Bacteria 1690
117 Ga0265322_10176616 3300028654 Bacteria 611
118 Ga0265336_10008796 3300028666 Bacteria 3520
119 Ga0265336_10051939 3300028666 Bacteria 1237
120 Ga0307515_10074165 3300028794 Bacteria 4557
121 Ga0265338_10004428 3300028800 Bacteria 18984
122 Ga0265338_10013236 3300028800 Bacteria 9335
123 Ga0265338_10027466 3300028800 Bacteria 5710
124 Ga0265338_10723863 3300028800 Bacteria 685
125 Ga0265324_10010679 3300029957 Bacteria 3526
126 Ga0265330_10058242 3300031235 Bacteria 1684
127 Ga0265330_10061837 3300031235 Bacteria 1629
128 Ga0265330_10116043 3300031235 Unclassified 1142
129 Ga0265332_10128860 3300031238 Bacteria 1062
130 Ga0265320_10001250 3300031240 Bacteria 18675
131 Ga0265320_10003204 3300031240 Bacteria 11075
132 Ga0265320_10017814 3300031240 Bacteria 3931
133 Ga0265320_10021273 3300031240 Bacteria 3494
134 Ga0265320_10043045 3300031240 Bacteria 2235
135 Ga0265320_10055757 3300031240 Bacteria 1901
136 Ga0265320_10055894 3300031240 Bacteria 1898
137 Ga0265320_10073564 3300031240 Bacteria 1606
138 Ga0265320_10097120 3300031240 Unclassified 1359
139 Ga0265320_10227873 3300031240 Bacteria 829
140 Ga0265325_10014393 3300031241 Bacteria 4473
141 Ga0265340_10001012 3300031247 Bacteria 15993
142 Ga0265340_10019662 3300031247 Bacteria 3477
143 Ga0265327_10004734 3300031251 Bacteria 11878
144 Ga0265327_10005338 3300031251 Bacteria 10764
145 Ga0265327_10181499 3300031251 Bacteria 962
146 Ga0265327_10202170 3300031251 Bacteria 899
147 Ga0265316_10011195 3300031344 Bacteria 8112
148 Ga0265316_10080973 3300031344 Bacteria 2490
149 Ga0265316_10515223 3300031344 Bacteria 853
150 Ga0265316_10844617 3300031344 Archaea 641
151 Ga0265313_10001132 3300031595 Bacteria 25503
152 Ga0265313_10013958 3300031595 Bacteria 4781
153 Ga0265313_10017833 3300031595 Bacteria 4011
154 Ga0265313_10028261 3300031595 Bacteria 2918
155 Ga0265313_10060878 3300031595 Bacteria 1769
156 Ga0316575_10051682 3300031665 Bacteria 1637
157 Ga0316579_10003764 3300031691 Bacteria 5969
158 Ga0265314_10002084 3300031711 Bacteria 21064
159 Ga0265314_10003544 3300031711 Bacteria 15064
160 Ga0265314_10028360 3300031711 Bacteria 4175
161 Ga0265314_10034805 3300031711 Bacteria 3675
162 Ga0265314_10506088 3300031711 Bacteria 635
163 Ga0265342_10065695 3300031712 Bacteria 2125
164 Ga0265342_10085859 3300031712 Bacteria 1810
165 Ga0265342_10089833 3300031712 Bacteria 1762
166 Ga0265342_10171792 3300031712 Bacteria 1192
167 Ga0265342_10185744 3300031712 Bacteria 1136
168 Ga0316576_10181679 3300031727 Bacteria 1587
169 Ga0316577_10344608 3300031733 Bacteria 845
170 Ga0307414_10264263 3300032004 Bacteria 1438
171 Ga0316593_10009630 3300032168 Bacteria 2738
172 Ga0316596_1035803 3300033541 Bacteria 1297
173 Ga0373938_0110971 3300034957 Bacteria 698
174 Ga0373932_0212722 3300035112 Bacteria 692
175 Ga0373960_0085361 3300035121 Bacteria 1001
176 Ga0373961_0132297 3300035241 Bacteria 836
177 Ga0316574_0031733 3300035398 Bacteria 3206
178 Ga0316574_0064393 3300035398 Bacteria 2307
179 Ga0316574_0088768 3300035398 Bacteria 1969
180 Ga0316582_0154007 3300036647 Bacteria 1555
181 Ga0316582_0260204 3300036647 Bacteria 1190
182 Ga0316584_0191097 3300036712 Bacteria 1513
183 Ga0316581_0086093 3300037588 Bacteria 967
184 Ga0400489_68884 3300039093 Bacteria 3974
185 Ga0451841_1358579 3300041498 Bacteria 672
186 Ga0451577_0003134 3300042876 Bacteria 18641
187 Ga0451577_0100300 3300042876 Unclassified 2586
188 Ga0451577_0130112 3300042876 Bacteria 2258
189 Ga0451577_0288298 3300042876 Bacteria 1488
190 Ga0451577_0390075 3300042876 Bacteria 1264
191 Ga0451577_0708727 3300042876 Bacteria 911
192 Ga0451577_1052411 3300042876 Bacteria 729
193 Ga0453683_0000466 3300044673 Bacteria 46503
194 Ga0453683_0000892 3300044673 Bacteria 28614
195 Ga0453683_0012817 3300044673 Bacteria 5486
196 Ga0453683_0026421 3300044673 Unclassified 3686
197 Ga0453683_0061571 3300044673 Bacteria 2346
198 Ga0453683_0124775 3300044673 Unclassified 1621
199 Ga0453683_0404461 3300044673 Bacteria 880
200 Ga0453684_0000267 3300044712 Bacteria 225314
201 Ga0453684_0000535 3300044712 Bacteria 144635
202 Ga0453684_0005347 3300044712 Bacteria 25580
203 Ga0453684_0010798 3300044712 Bacteria 15488
204 Ga0453684_0014183 3300044712 Bacteria 12801
205 Ga0453684_0015670 3300044712 Bacteria 11947
206 Ga0453684_0068322 3300044712 Bacteria 4513
207 Ga0453684_0078707 3300044712 Bacteria 4124
208 Ga0453684_0110009 3300044712 Bacteria 3350
209 Ga0453684_0132012 3300044712 Unclassified 2995
210 Ga0453684_0134257 3300044712 Bacteria 2965
211 Ga0453684_0148531 3300044712 Bacteria 2788
212 Ga0453684_0184717 3300044712 Bacteria 2445
213 Ga0453684_0226495 3300044712 Bacteria 2161
214 Ga0453684_0315144 3300044712 Unclassified 1773
215 Ga0453684_0337416 3300044712 Unclassified 1703
216 Ga0453684_0578608 3300044712 Bacteria 1233
217 Ga0453684_1347071 3300044712 Bacteria 742
218 Ga0451576_0005103 3300045051 Bacteria 16641
219 Ga0451576_0009596 3300045051 Bacteria 11202
220 Ga0451576_0078884 3300045051 Bacteria 3426
221 Ga0451576_0265384 3300045051 Bacteria 1795
222 Ga0451576_0303759 3300045051 Bacteria 1669
223 Ga0501034_0525376 3300049571 Bacteria 1095
224 Ga0501046_0006598 3300049580 Bacteria 10252
225 Ga0501047_0013651 3300049581 Bacteria 7710
226 Ga0501071_0690708 3300049587 Bacteria 786
227 Ga0501072_1358917 3300049588 Bacteria 550
228 nmdc:mga05p37_721295_c1 3300050507 Bacteria 1104
229 nmdc:mga05p37_90244_c1 3300050507 Bacteria 3777
230 nmdc:mga09592_124608_c1 3300050508 Unclassified 2214
231 nmdc:mga09592_243365_c1 3300050508 Bacteria 1559
232 nmdc:mga09592_78513_c1 3300050508 Bacteria 2809
233 nmdc:mga0qj67_162702_c1 3300050509 Unclassified 1811
234 nmdc:mga0qj67_338540_c1 3300050509 Bacteria 1217
235 nmdc:mga08y16_725727_c1 3300050511 Bacteria 991
236 nmdc:mga0a205_1058260_c1 3300050515 Bacteria 658
237 Ga0501082_0431564 3300060353 Bacteria 1151
238 2788434551 2786546940 Bacteria 6396474
239 Ga0265327_10004970
240 MRS1b_contig_2555168
241 rootH1_10139582
242 rootH1_10314724
243 Ga0065704_10038656
244 Ga0065704_10213119
245 Ga0065715_10589314
246 Ga0065707_10006450
247 Ga0065707_10085571
248 Ga0065707_10101781
249 Ga0065707_10215457
250 Ga0070683_100007164
251 Ga0070683_100011978
252 Ga0070670_100967444
253 Ga0070689_100141243
254 Ga0070689_100350102
255 Ga0070689_100627235
256 Ga0070689_102145618
257 Ga0070700_100170165
258 Ga0070708_100000510
259 Ga0070706_101095266
260 Ga0070707_100013829
261 Ga0070707_100130518
262 Ga0070698_100050628
263 Ga0070699_100019874
264 Ga0070679_100005992
265 Ga0068853_100032616
266 Ga0068853_100269152
267 Ga0070686_100442664
268 Ga0070686_100501058
269 Ga0068857_100532819
270 Ga0068856_100052438
271 Ga0070702_101307834
272 Ga0068852_100247746
273 Ga0068859_100108183
274 Ga0068859_100236198
275 Ga0068864_100391177
276 Ga0068864_101280902
277 Ga0068870_10164702
278 Ga0068870_10294128
279 Ga0068860_100955615
280 Ga0068860_102623882
281 Ga0068862_100028617
282 Ga0075430_100255736
283 Ga0075431_100351152
284 Ga0075431_101198766
285 Ga0075433_10851545
286 Ga0075434_100969093
287 Ga0075429_100157969
288 Ga0097620_100108182
289 Ga0097620_100236202
290 Ga0099794_10160594
291 Ga0111539_11036310
292 Ga0114129_10230506
293 Ga0114129_10642866
294 Ga0114129_10758255
295 Ga0114129_10918871
296 Ga0105243_12719005
297 Ga0105249_10290507
298 Ga0105246_10010247
299 Ga0105246_10413063
300 Ga0157378_10946706
301 Ga0163163_10279108
302 Ga0157376_10568127
303 Ga0207643_10125190
304 Ga0207643_10234981
305 Ga0207684_10874062
306 Ga0207662_10790812
307 Ga0207652_10010676
308 Ga0207646_10102400
309 Ga0207646_10145660
310 Ga0207670_10288985
311 Ga0207711_10480789
312 Ga0207661_10008729
313 Ga0207661_10039521
314 Ga0207712_10250897
315 Ga0207639_10099294
316 Ga0207639_10277057
317 Ga0207708_10389528
318 Ga0207676_10083476
319 Ga0207676_11105211
320 Ga0207674_10322043
321 Ga0207674_11257775
322 Ga0207675_100176435
323 Ga0207683_10295611
324 Ga0209588_1019773
325 Ga0268265_10414883
326 Ga0268264_10800298
327 Ga0268264_12491831
328 Ga0265337_1014356
329 Ga0265337_1020495
330 Ga0265337_1063388
331 Ga0265326_10012433
332 Ga0265319_1000185
333 Ga0265319_1000302
334 Ga0265319_1009358
335 Ga0265319_1012512
336 Ga0265319_1015658
337 Ga0265319_1053096
338 Ga0265319_1062713
339 Ga0265334_10065885
340 Ga0265318_10000745
341 Ga0265318_10000907
342 Ga0265318_10000913
343 Ga0265318_10002633
344 Ga0265318_10008184
345 Ga0265318_10065358
346 Ga0265318_10165050
347 Ga0265323_10001822
348 Ga0265323_10018847
349 Ga0265323_10021416
350 Ga0265323_10029068
351 Ga0265323_10042357
352 Ga0265323_10058240
353 Ga0265322_10006621
354 Ga0265322_10025524
355 Ga0265322_10176616
356 Ga0265336_10008796
357 Ga0265336_10051939
358 Ga0307515_10074165
359 Ga0265338_10004428
360 Ga0265338_10013236
361 Ga0265338_10027466
362 Ga0265338_10723863
363 Ga0265324_10010679
364 Ga0265330_10058242
365 Ga0265330_10061837
366 Ga0265330_10116043
367 Ga0265332_10128860
368 Ga0265320_10001250
369 Ga0265320_10003204
370 Ga0265320_10017814
371 Ga0265320_10021273
372 Ga0265320_10043045
373 Ga0265320_10055757
374 Ga0265320_10055894
375 Ga0265320_10073564
376 Ga0265320_10097120
377 Ga0265320_10227873
378 Ga0265325_10014393
379 Ga0265340_10001012
380 Ga0265340_10019662
381 Ga0265327_10004734
382 Ga0265327_10005338
383 Ga0265327_10181499
384 Ga0265327_10202170
385 Ga0265316_10011195
386 Ga0265316_10080973
387 Ga0265316_10515223
388 Ga0265316_10844617
389 Ga0265313_10001132
390 Ga0265313_10013958
391 Ga0265313_10017833
392 Ga0265313_10028261
393 Ga0265313_10060878
394 Ga0316575_10051682
395 Ga0316579_10003764
396 Ga0265314_10002084
397 Ga0265314_10003544
398 Ga0265314_10028360
399 Ga0265314_10034805
400 Ga0265314_10506088
401 Ga0265342_10065695
402 Ga0265342_10085859
403 Ga0265342_10089833
404 Ga0265342_10171792
405 Ga0265342_10185744
406 Ga0316576_10181679
407 Ga0316577_10344608
408 Ga0307414_10264263
409 Ga0316593_10009630
410 Ga0316596_1035803
411 Ga0373938_0110971
412 Ga0373932_0212722
413 Ga0373960_0085361
414 Ga0373961_0132297
415 Ga0316574_0031733
416 Ga0316574_0064393
417 Ga0316574_0088768
418 Ga0316582_0154007
419 Ga0316582_0260204
420 Ga0316584_0191097
421 Ga0316581_0086093
422 Ga0400489_68884
423 Ga0451841_1358579
424 Ga0451577_0003134
425 Ga0451577_0100300
426 Ga0451577_0130112
427 Ga0451577_0288298
428 Ga0451577_0390075
429 Ga0451577_0708727
430 Ga0451577_1052411
431 Ga0453683_0000466
432 Ga0453683_0000892
433 Ga0453683_0012817
434 Ga0453683_0026421
435 Ga0453683_0061571
436 Ga0453683_0124775
437 Ga0453683_0404461
438 Ga0453684_0000267
439 Ga0453684_0000535
440 Ga0453684_0005347
441 Ga0453684_0010798
442 Ga0453684_0014183
443 Ga0453684_0015670
444 Ga0453684_0068322
445 Ga0453684_0078707
446 Ga0453684_0110009
447 Ga0453684_0132012
448 Ga0453684_0134257
449 Ga0453684_0148531
450 Ga0453684_0184717
451 Ga0453684_0226495
452 Ga0453684_0315144
453 Ga0453684_0337416
454 Ga0453684_0578608
455 Ga0453684_1347071
456 Ga0451576_0005103
457 Ga0451576_0009596
458 Ga0451576_0078884
459 Ga0451576_0265384
460 Ga0451576_0303759
461 Ga0501034_0525376
462 Ga0501046_0006598
463 Ga0501047_0013651
464 Ga0501071_0690708
465 Ga0501072_1358917
466 nmdc:mga05p37_721295_c1
467 nmdc:mga05p37_90244_c1
468 nmdc:mga09592_124608_c1
469 nmdc:mga09592_243365_c1
470 nmdc:mga09592_78513_c1
471 nmdc:mga0qj67_162702_c1
472 nmdc:mga0qj67_338540_c1
473 nmdc:mga08y16_725727_c1
474 nmdc:mga0a205_1058260_c1
475 Ga0501082_0431564
476 2788434551

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02142

MGS

MGS-like domain

47

140

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f2c-assembly2.cif.gz_G methylglyoxal synthase mgsa from bacillus subtilis 0.9419 11 127
8u2v-assembly1.cif.gz_B crystal structure of methylglyoxal synthase from borrelia burgdorferi 0.9373 11 127
1wo8-assembly1.cif.gz_A crystal structure of methylglyoxal synthase from thermus thermophilus hb8 0.9338 12 128
1b93-assembly1.cif.gz_C-2 methylglyoxal synthase from escherichia coli 0.9305 1 143
1s8a-assembly1.cif.gz_E h98q mutant of methylglyoxal synthase from e. coli complexed with phosphoglycolic acid 0.9215 1 147
ID Description Score Start End Superfamily
5h3lB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylglyoxal synthase-like domain 0.9225 2 143 3.40.50.1380
2xw6C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylglyoxal synthase-like domain 0.9115 12 127 3.40.50.1380
5h3lB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylglyoxal synthase-like domain 0.9102 2 143 3.40.50.1380
2xw6C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylglyoxal synthase-like domain 0.8491 12 127 3.40.50.1380
af_Q2FZ72_931_1056_3.40.50.1380 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylglyoxal synthase-like domain 0.7787 8 126 3.40.50.1380
ID Description Score Start End GO Terms
AF-A0A285GCH6-F1-model_v4 deleted 0.9947 8 60
AF-A0A356QFN3-F1-model_v4 Methylglyoxal synthase 0.9923 8 60 GO:0005829
GO:0008929
GO:0019242
AF-A0A3B8WCF4-F1-model_v4 Methylglyoxal synthase 0.992 12 57 GO:0005829
GO:0008929
GO:0019242
AF-A0A7Y6YB58-F1-model_v4 Methylglyoxal synthase 0.9739 8 60 GO:0005829
GO:0008929
GO:0019242
AF-A0A7X3FHU9-F1-model_v4 Methylglyoxal synthase (MGS) (EC 4.2.3.3) 0.9666 13 127 GO:0005829
GO:0008929
GO:0019242

Map