F350418

General Info

Members Datasets Scaffolds Average Seq Length
237 161 236 341

Family's Representative Sequence

Representative Sequence 3300050508|nmdc:mga09592_87148_c1|nmdc:mga09592_87148_c1_283_1446
Length 387
Sequence MSTDSAITAVSAASVTIHLLEPMTAGYRGVEMPHYVMQETPFQPAWSTTGRSWPLDRPMTPVIETFPLGVPWHTADPFLFCVHHDDAYPAGNDKLGPAASLAGRDLGQDFAGKDGWRMYHGRTVPGFPGHPHRGFETVTIVRRGLIDHSDSLGATARFGRGDVQWLTAGKGIVHSEMFPLLDAVAPNPLELFQIWLNLPRADKLVEPHFSMLWADEIPHIALPDGGDITVVAGRLGEVAPLAPPPHSWAARPESDVAIWSMRLAGGRTTLPPARAGTNRTLYIFRGALTVGGKTIVQGTGARLVPDVAVELSGEGEALLLQGRPIGEPVVQYGPFVMNTRAEIQQAFVDYQRTQFGGWPWPDEAPVHARDAGRFARHADGRVEERER

Samples

Sample ID Description Type Environment
1 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
77 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
78 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
85 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
89 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
90 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
94 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
95 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
96 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
154 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
155 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
156 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
157 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
160 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.16
Metatranscriptomes 0.42
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.06
Nodule 0
Rhizoplane 0.42
Rhizosphere 86.08
Stem 0
Stem Tuber 0
Unclassified 8.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10154098 3300003322 Bacteria 1385
2 Ga0065715_10008470 3300005293 Bacteria 5515
3 Ga0065707_10009336 3300005295 Bacteria 3949
4 Ga0070683_100022075 3300005329 Bacteria 5685
5 Ga0070690_100000478 3300005330 Bacteria 20135
6 Ga0070690_100114233 3300005330 Unclassified 1805
7 Ga0070670_100000573 3300005331 Bacteria 29071
8 Ga0068869_100042201 3300005334 Bacteria 3270
9 Ga0068869_100053210 3300005334 Bacteria 2942
10 Ga0070680_100046313 3300005336 Bacteria 3538
11 Ga0070682_100021142 3300005337 Bacteria 3835
12 Ga0068868_100001191 3300005338 Bacteria 17841
13 Ga0070689_100080017 3300005340 Bacteria 2564
14 Ga0070689_100363349 3300005340 Bacteria 1217
15 Ga0070669_100005196 3300005353 Bacteria 9419
16 Ga0070675_100048907 3300005354 Bacteria 3469
17 Ga0070674_100000071 3300005356 Bacteria 46918
18 Ga0070678_100047130 3300005456 Bacteria 3095
19 Ga0070678_100081660 3300005456 Bacteria 2451
20 Ga0070681_10045456 3300005458 Bacteria 4393
21 Ga0070681_10062052 3300005458 Bacteria 3712
22 Ga0070681_10321523 3300005458 Bacteria 1457
23 Ga0068867_100048784 3300005459 Bacteria 3116
24 Ga0068867_100068396 3300005459 Bacteria 2650
25 Ga0070706_100291407 3300005467 Bacteria 1523
26 Ga0070698_100000184 3300005471 Bacteria 59150
27 Ga0070699_100138319 3300005518 Bacteria 2149
28 Ga0070679_100056138 3300005530 Bacteria 3923
29 Ga0070679_100146861 3300005530 Bacteria 2335
30 Ga0070679_100187958 3300005530 Bacteria 2035
31 Ga0070686_100199947 3300005544 Bacteria 1432
32 Ga0070693_100058269 3300005547 Bacteria 2235
33 Ga0070665_100002345 3300005548 Bacteria 20971
34 Ga0068856_100023787 3300005614 Bacteria 5958
35 Ga0070702_100290830 3300005615 Bacteria 1126
36 Ga0068861_100440105 3300005719 Bacteria 1166
37 Ga0068870_10012808 3300005840 Bacteria 3926
38 Ga0068870_10094956 3300005840 Bacteria 1674
39 Ga0068862_100087380 3300005844 Bacteria 2712
40 Ga0070717_10113512 3300006028 Bacteria 2313
41 Ga0075368_10098862 3300006042 Bacteria 1197
42 Ga0070716_100220772 3300006173 Bacteria 1273
43 Ga0097621_100013890 3300006237 Bacteria 6014
44 Ga0068871_100020226 3300006358 Bacteria 5097
45 Ga0068871_100397329 3300006358 Bacteria 1227
46 Ga0075428_100019803 3300006844 Bacteria 7447
47 Ga0075428_100045066 3300006844 Bacteria 4846
48 Ga0075430_100181782 3300006846 Bacteria 1749
49 Ga0075429_100005929 3300006880 Bacteria 10548
50 Ga0075429_100054552 3300006880 Bacteria 3477
51 Ga0075435_100074709 3300007076 Bacteria 2774
52 Ga0105251_10000077 3300009011 Bacteria 93505
53 Ga0111539_10002488 3300009094 Bacteria 24443
54 Ga0111539_10095892 3300009094 Bacteria 3484
55 Ga0111539_10114709 3300009094 Bacteria 3160
56 Ga0111539_10176640 3300009094 Bacteria 2495
57 Ga0105245_10000017 3300009098 Bacteria 187657
58 Ga0105242_10005465 3300009176 Bacteria 9813
59 Ga0105249_10012049 3300009553 Bacteria 7612
60 Ga0105239_10139675 3300010375 Bacteria 2699
61 Ga0157374_10026783 3300013296 Bacteria 5191
62 Ga0163162_10223097 3300013306 Bacteria 2014
63 Ga0157372_10368618 3300013307 Bacteria 1673
64 Ga0157375_10134986 3300013308 Bacteria 2590
65 Ga0157380_10065103 3300014326 Bacteria 2928
66 Ga0157380_10082115 3300014326 Bacteria 2637
67 Ga0157376_10042214 3300014969 Bacteria 3738
68 Ga0157376_10183907 3300014969 Bacteria 1912
69 Ga0207713_1001172 3300025735 Bacteria 22116
70 Ga0207688_10031742 3300025901 Bacteria 2917
71 Ga0207645_10080020 3300025907 Bacteria 2094
72 Ga0207643_10005267 3300025908 Bacteria 6918
73 Ga0207643_10058945 3300025908 Bacteria 2190
74 Ga0207652_10014588 3300025921 Bacteria 6369
75 Ga0207652_10048570 3300025921 Bacteria 3628
76 Ga0207652_10276816 3300025921 Bacteria 1514
77 Ga0207681_10019046 3300025923 Bacteria 4332
78 Ga0207659_10120126 3300025926 Bacteria 2013
79 Ga0207659_10123533 3300025926 Bacteria 1987
80 Ga0207687_10000041 3300025927 Bacteria 112235
81 Ga0207706_10011225 3300025933 Bacteria 8168
82 Ga0207686_10149420 3300025934 Bacteria 1625
83 Ga0207670_10014850 3300025936 Bacteria 4636
84 Ga0207670_10123451 3300025936 Bacteria 1886
85 Ga0207670_10315823 3300025936 Bacteria 1228
86 Ga0207670_10361363 3300025936 Unclassified 1152
87 Ga0207691_10016747 3300025940 Bacteria 6958
88 Ga0207689_10047763 3300025942 Bacteria 3532
89 Ga0207689_10090116 3300025942 Bacteria 2520
90 Ga0207712_10046865 3300025961 Bacteria 2999
91 Ga0207658_10150999 3300025986 Bacteria 1893
92 Ga0207677_10014313 3300026023 Bacteria 4629
93 Ga0207708_10110898 3300026075 Bacteria 2129
94 Ga0207641_10008775 3300026088 Bacteria 8349
95 Ga0207648_10121205 3300026089 Bacteria 2300
96 Ga0207683_10019488 3300026121 Bacteria 5793
97 Ga0207683_10019847 3300026121 Bacteria 5742
98 Ga0207428_10073270 3300027907 Bacteria 2687
99 Ga0268266_10024336 3300028379 Bacteria 5151
100 Ga0268265_10046727 3300028380 Bacteria 3238
101 Ga0268265_10324472 3300028380 Bacteria 1396
102 Ga0268264_10274686 3300028381 Bacteria 1576
103 Ga0265319_1033696 3300028563 Unclassified 1767
104 Ga0265318_10031878 3300028577 Bacteria 2042
105 Ga0307517_10030883 3300028786 Bacteria 6260
106 Ga0307515_10001245 3300028794 Bacteria 58063
107 Ga0307515_10346664 3300028794 Bacteria 1134
108 Ga0265338_10188163 3300028800 Bacteria 1567
109 Ga0265332_10005386 3300031238 Bacteria 5906
110 Ga0265332_10046717 3300031238 Bacteria 1864
111 Ga0265339_10049235 3300031249 Bacteria 2308
112 Ga0307509_10000175 3300031507 Bacteria 100922
113 Ga0307509_10007570 3300031507 Bacteria 14141
114 Ga0307509_10014446 3300031507 Bacteria 9281
115 Ga0307509_10132472 3300031507 Bacteria 2445
116 Ga0307509_10164280 3300031507 Bacteria 2112
117 Ga0307508_10001760 3300031616 Bacteria 24053
118 Ga0316579_10030527 3300031691 Bacteria 2464
119 Ga0265314_10051411 3300031711 Bacteria 2870
120 Ga0265342_10066316 3300031712 Bacteria 2114
121 Ga0316576_10001633 3300031727 Bacteria 12261
122 Ga0316576_10005631 3300031727 Bacteria 7690
123 Ga0316576_10139578 3300031727 Bacteria 1824
124 Ga0316578_10031935 3300031728 Unclassified 3004
125 Ga0316578_10032947 3300031728 Bacteria 2964
126 Ga0316578_10033357 3300031728 Bacteria 2949
127 Ga0316578_10078809 3300031728 Bacteria 1958
128 Ga0316577_10067356 3300031733 Bacteria 1998
129 Ga0307412_10012825 3300031911 Bacteria 4895
130 Ga0307415_100101011 3300032126 Bacteria 2116
131 Ga0316585_10005063 3300032137 Unclassified 3708
132 Ga0373950_0000007 3300034818 Bacteria 392070
133 Ga0373950_0000025 3300034818 Bacteria 177524
134 Ga0373949_0000060 3300035090 Bacteria 41342
135 Ga0373936_0000044 3300035113 Bacteria 84886
136 Ga0373943_0011316 3300035170 Bacteria 4014
137 Ga0373955_0114155 3300035172 Bacteria 1564
138 Ga0373961_0000518 3300035241 Bacteria 14690
139 Ga0316574_0163708 3300035398 Bacteria 1432
140 Ga0316574_0225947 3300035398 Unclassified 1199
141 Ga0373933_0017379 3300035724 Bacteria 4036
142 Ga0373937_0006189 3300036401 Bacteria 10307
143 Ga0316582_0015327 3300036647 Bacteria 4379
144 Ga0316584_0024745 3300036712 Bacteria 4397
145 Ga0316584_0123795 3300036712 Bacteria 1931
146 Ga0316584_0308572 3300036712 Unclassified 1144
147 Ga0373925_0017820 3300037068 Bacteria 5153
148 Ga0395899_0259742 3300037312 Bacteria 1188
149 Ga0395898_0479538 3300037466 Bacteria 1183
150 Ga0395905_0094468 3300037471 Bacteria 2805
151 Ga0395901_0149510 3300038443 Bacteria 2454
152 Ga0436362_0153230 3300039453 Bacteria 1680
153 Ga0451853_1242398 3300041512 Bacteria 1623
154 Ga0451577_0305535 3300042876 Bacteria 1441
155 Ga0466972_0060698 3300044658 Bacteria 1814
156 Ga0466967_0082060 3300045976 Bacteria 2913
157 Ga0495651_0075786 3300046462 Bacteria 2549
158 Ga0495604_0249930 3300047317 Bacteria 1209
159 Ga0495636_0001103 3300047318 Bacteria 10147
160 Ga0495593_0094088 3300047673 Bacteria 1542
161 Ga0496112_0019633 3300048915 Bacteria 6383
162 Ga0496117_0001817 3300048920 Bacteria 28976
163 Ga0496119_0000484 3300048922 Bacteria 54485
164 Ga0496120_0000162 3300048923 Bacteria 112200
165 Ga0496122_0000039 3300048925 Bacteria 295352
166 Ga0496122_0000049 3300048925 Bacteria 268493
167 Ga0496123_0000026 3300048926 Bacteria 318040
168 Ga0496123_0000042 3300048926 Bacteria 254481
169 Ga0496124_0000905 3300048927 Bacteria 47960
170 Ga0496124_0022429 3300048927 Bacteria 5787
171 Ga0501305_007987 3300049161 Bacteria 1358
172 Ga0501034_0000120 3300049571 Bacteria 144382
173 Ga0501036_0018490 3300049572 Bacteria 5841
174 Ga0501036_0518267 3300049572 Bacteria 992
175 Ga0501038_0410698 3300049574 Bacteria 1046
176 Ga0501043_0000571 3300049579 Bacteria 32915
177 Ga0501046_0000429 3300049580 Bacteria 42085
178 Ga0501047_0000009 3300049581 Bacteria 436619
179 Ga0501047_0015940 3300049581 Bacteria 7165
180 Ga0501048_0046209 3300049582 Bacteria 3108
181 Ga0501067_0000165 3300049583 Bacteria 37229
182 Ga0501067_0004228 3300049583 Bacteria 7924
183 Ga0501067_0026387 3300049583 Bacteria 3218
184 Ga0501068_0047560 3300049584 Bacteria 2588
185 Ga0501069_0008412 3300049585 Bacteria 5423
186 Ga0501069_0026696 3300049585 Bacteria 3163
187 Ga0501070_0000453 3300049586 Bacteria 37280
188 Ga0501070_0006806 3300049586 Bacteria 9723
189 Ga0501070_0007006 3300049586 Bacteria 9591
190 Ga0501070_0047113 3300049586 Bacteria 3584
191 Ga0501070_0077465 3300049586 Bacteria 2752
192 Ga0501070_0177892 3300049586 Bacteria 1751
193 Ga0501072_0000345 3300049588 Bacteria 33043
194 Ga0501072_0176779 3300049588 Bacteria 1703
195 Ga0501073_0002937 3300049589 Bacteria 12779
196 Ga0501073_0004343 3300049589 Bacteria 10643
197 Ga0501073_0005732 3300049589 Bacteria 9290
198 Ga0501073_0008658 3300049589 Bacteria 7539
199 Ga0501073_0022649 3300049589 Bacteria 4520
200 Ga0501074_0000198 3300049590 Bacteria 32721
201 Ga0501074_0031626 3300049590 Bacteria 3834
202 Ga0501079_0000985 3300049741 Bacteria 19639
203 Ga0501080_0013230 3300049742 Bacteria 7580
204 Ga0501080_0016097 3300049742 Bacteria 6903
205 Ga0501080_0117700 3300049742 Bacteria 2463
206 Ga0501081_0264007 3300049743 Bacteria 1258
207 Ga0501083_0000910 3300049744 Bacteria 19623
208 Ga0501083_0003703 3300049744 Bacteria 10734
209 Ga0501083_0007279 3300049744 Bacteria 7853
210 Ga0501083_0156327 3300049744 Bacteria 1492
211 Ga0501035_0110432 3300049822 Bacteria 2410
212 Ga0501044_0103515 3300049823 Bacteria 2861
213 Ga0501044_0491659 3300049823 Bacteria 1129
214 nmdc:mga09592_52190_c1 3300050508 Bacteria 3451
215 nmdc:mga09592_87148_c1 3300050508 Bacteria 2665
216 nmdc:mga0qj67_104911_c1 3300050509 Bacteria 2280
217 nmdc:mga06r32_141032_c1 3300050510 Bacteria 2386
218 nmdc:mga08y16_123092_c1 3300050511 Bacteria 2699
219 nmdc:mga08y16_4085_c1 3300050511 Bacteria 15237
220 nmdc:mga08y16_85537_c1 3300050511 Bacteria 3286
221 nmdc:mga0n895_152860_c1 3300050512 Bacteria 2338
222 Ga0500566_0001253 3300053094 Bacteria 14825
223 Ga0500566_0003571 3300053094 Bacteria 9265
224 Ga0500566_0020331 3300053094 Bacteria 3902
225 Ga0500554_000053 3300053102 Bacteria 20744
226 Ga0500595_000015 3300053119 Bacteria 224592
227 Ga0500597_007803 3300053120 Bacteria 3655
228 Ga0500614_000246 3300053123 Bacteria 14134
229 Ga0500559_0011533 3300053136 Bacteria 3775
230 Ga0500568_0001186 3300053139 Bacteria 17420
231 Ga0500568_0008630 3300053139 Bacteria 4895
232 Ga0500603_006336 3300053150 Bacteria 2570
233 Ga0501084_0000032 3300054114 Bacteria 116422
234 Ga0501082_0001664 3300060353 Bacteria 19578
235 Ga0501082_0020084 3300060353 Bacteria 5757
236 Ga0501082_0275851 3300060353 Bacteria 1464

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0518267 Ga0501036_0518267_14_835 260
2 3300049584 Ga0501068_0047560 Ga0501068_0047560_86_925 274
3 3300049743 Ga0501081_0264007 Ga0501081_0264007_27_869 278
4 3300049586 Ga0501070_0177892 Ga0501070_0177892_16_936 292
5 3300035170 Ga0373943_0011316 Ga0373943_0011316_461_1420 315
6 3300005456 Ga0070678_100081660 Ga0070678_1000816603 321
7 3300026121 Ga0207683_10019488 Ga0207683_100194883 321
8 3300031238 Ga0265332_10005386 Ga0265332_100053866 322
9 3300031507 Ga0307509_10164280 Ga0307509_101642802 322
10 3300039453 Ga0436362_0153230 Ga0436362_0153230_300_1310 322
11 3300049586 Ga0501070_0047113 Ga0501070_0047113_1285_2298 322
12 3300037466 Ga0395898_0479538 Ga0395898_0479538_167_1162 323
13 3300049574 Ga0501038_0410698 Ga0501038_0410698_18_1034 323
14 3300049823 Ga0501044_0103515 Ga0501044_0103515_252_1268 323
15 3300013296 Ga0157374_10026783 Ga0157374_100267834 324
16 3300035090 Ga0373949_0000060 Ga0373949_0000060_34558_35565 325
17 3300037068 Ga0373925_0017820 Ga0373925_0017820_2580_3602 325
18 3300042876 Ga0451577_0305535 Ga0451577_0305535_273_1250 325
19 3300037312 Ga0395899_0259742 Ga0395899_0259742_142_1146 326
20 3300038443 Ga0395901_0149510 Ga0395901_0149510_1126_2130 326
21 3300025926 Ga0207659_10123533 Ga0207659_101235333 327
22 3300005518 Ga0070699_100138319 Ga0070699_1001383192 328
23 3300007076 Ga0075435_100074709 Ga0075435_1000747092 328
24 3300009094 Ga0111539_10176640 Ga0111539_101766402 328
25 3300025936 Ga0207670_10315823 Ga0207670_103158232 328
26 3300047318 Ga0495636_0001103 Ga0495636_0001103_6806_7819 328
27 3300049581 Ga0501047_0015940 Ga0501047_0015940_2726_3742 328
28 3300049822 Ga0501035_0110432 Ga0501035_0110432_802_1821 328
29 3300049823 Ga0501044_0491659 Ga0501044_0491659_32_1063 328
30 3300050511 nmdc:mga08y16_123092_c1 nmdc:mga08y16_123092_c1_577_1599 328
31 3300005458 Ga0070681_10045456 Ga0070681_100454566 329
32 3300005530 Ga0070679_100187958 Ga0070679_1001879582 329
33 3300005614 Ga0068856_100023787 Ga0068856_1000237873 329
34 3300006358 Ga0068871_100397329 Ga0068871_1003973292 329
35 3300009176 Ga0105242_10005465 Ga0105242_100054652 329
36 3300010375 Ga0105239_10139675 Ga0105239_101396753 329
37 3300014969 Ga0157376_10042214 Ga0157376_100422144 329
38 3300025921 Ga0207652_10048570 Ga0207652_100485703 329
39 3300028794 Ga0307515_10001245 Ga0307515_100012456 329
40 3300005548 Ga0070665_100002345 Ga0070665_10000234516 330
41 3300028379 Ga0268266_10024336 Ga0268266_100243364 330
42 3300031616 Ga0307508_10001760 Ga0307508_1000176013 330
43 3300049586 Ga0501070_0007006 Ga0501070_0007006_6953_7948 330
44 3300049744 Ga0501083_0156327 Ga0501083_0156327_117_1112 330
45 3300009094 Ga0111539_10114709 Ga0111539_101147093 331
46 3300026088 Ga0207641_10008775 Ga0207641_100087755 331
47 3300027907 Ga0207428_10073270 Ga0207428_100732702 331
48 3300035113 Ga0373936_0000044 Ga0373936_0000044_83222_84253 331
49 3300049589 Ga0501073_0004343 Ga0501073_0004343_2992_4023 331
50 3300050511 nmdc:mga08y16_4085_c1 nmdc:mga08y16_4085_c1_9378_10379 331
51 3300053120 Ga0500597_007803 Ga0500597_007803_51_1058 331
52 3300053139 Ga0500568_0001186 Ga0500568_0001186_6564_7580 331
53 3300005331 Ga0070670_100000573 Ga0070670_10000057320 332
54 3300005338 Ga0068868_100001191 Ga0068868_10000119110 332
55 3300005459 Ga0068867_100068396 Ga0068867_1000683962 332
56 3300006237 Ga0097621_100013890 Ga0097621_1000138902 332
57 3300006358 Ga0068871_100020226 Ga0068871_1000202263 332
58 3300009098 Ga0105245_10000017 Ga0105245_10000017135 332
59 3300014969 Ga0157376_10183907 Ga0157376_101839072 332
60 3300025927 Ga0207687_10000041 Ga0207687_10000041102 332
61 3300025934 Ga0207686_10149420 Ga0207686_101494202 332
62 3300026023 Ga0207677_10014313 Ga0207677_100143134 332
63 3300026089 Ga0207648_10121205 Ga0207648_101212052 332
64 3300028380 Ga0268265_10324472 Ga0268265_103244722 332
65 3300028381 Ga0268264_10274686 Ga0268264_102746862 332
66 3300048920 Ga0496117_0001817 Ga0496117_0001817_11007_12074 332
67 3300048922 Ga0496119_0000484 Ga0496119_0000484_35755_36822 332
68 3300048923 Ga0496120_0000162 Ga0496120_0000162_92673_93740 332
69 3300048925 Ga0496122_0000049 Ga0496122_0000049_58976_60043 332
70 3300048926 Ga0496123_0000042 Ga0496123_0000042_194417_195484 332
71 3300048927 Ga0496124_0000905 Ga0496124_0000905_11245_12312 332
72 3300049571 Ga0501034_0000120 Ga0501034_0000120_18065_19150 332
73 3300049572 Ga0501036_0018490 Ga0501036_0018490_80_1165 332
74 3300049579 Ga0501043_0000571 Ga0501043_0000571_16888_17973 332
75 3300049580 Ga0501046_0000429 Ga0501046_0000429_21150_22235 332
76 3300049581 Ga0501047_0000009 Ga0501047_0000009_319465_320550 332
77 3300049582 Ga0501048_0046209 Ga0501048_0046209_1775_2860 332
78 3300049583 Ga0501067_0004228 Ga0501067_0004228_5779_6819 332
79 3300049586 Ga0501070_0006806 Ga0501070_0006806_6568_7653 332
80 3300049588 Ga0501072_0000345 Ga0501072_0000345_30016_31101 332
81 3300049589 Ga0501073_0002937 Ga0501073_0002937_8485_9570 332
82 3300049590 Ga0501074_0000198 Ga0501074_0000198_30271_31356 332
83 3300049741 Ga0501079_0000985 Ga0501079_0000985_15473_16558 332
84 3300049742 Ga0501080_0013230 Ga0501080_0013230_2454_3539 332
85 3300049744 Ga0501083_0003703 Ga0501083_0003703_3082_4167 332
86 3300054114 Ga0501084_0000032 Ga0501084_0000032_66979_68064 332
87 3300060353 Ga0501082_0001664 Ga0501082_0001664_3914_4999 332
88 3300005471 Ga0070698_100000184 Ga0070698_10000018445 333
89 3300009094 Ga0111539_10002488 Ga0111539_100024884 333
90 3300031507 Ga0307509_10014446 Ga0307509_100144467 333
91 3300034818 Ga0373950_0000007 Ga0373950_0000007_369329_370372 333
92 3300037471 Ga0395905_0094468 Ga0395905_0094468_1754_2770 333
93 3300045976 Ga0466967_0082060 Ga0466967_0082060_847_1857 333
94 3300049583 Ga0501067_0000165 Ga0501067_0000165_33202_34245 333
95 3300049589 Ga0501073_0005732 Ga0501073_0005732_3492_4535 333
96 3300050512 nmdc:mga0n895_152860_c1 nmdc:mga0n895_152860_c1_1133_2167 333
97 3300005330 Ga0070690_100000478 Ga0070690_10000047815 334
98 3300006880 Ga0075429_100054552 Ga0075429_1000545523 334
99 3300009553 Ga0105249_10012049 Ga0105249_100120494 334
100 3300025961 Ga0207712_10046865 Ga0207712_100468652 334
101 3300031507 Ga0307509_10007570 Ga0307509_1000757013 334
102 3300050508 nmdc:mga09592_87148_c1 nmdc:mga09592_87148_c1_283_1446 334
103 3300053139 Ga0500568_0008630 Ga0500568_0008630_577_1596 334
104 3300006173 Ga0070716_100220772 Ga0070716_1002207722 335
105 3300009094 Ga0111539_10095892 Ga0111539_100958924 335
106 3300050511 nmdc:mga08y16_85537_c1 nmdc:mga08y16_85537_c1_2213_3220 335
107 3300049586 Ga0501070_0077465 Ga0501070_0077465_1252_2292 336
108 3300049589 Ga0501073_0022649 Ga0501073_0022649_3353_4393 336
109 3300049744 Ga0501083_0007279 Ga0501083_0007279_4543_5583 336
110 3300025921 Ga0207652_10276816 Ga0207652_102768162 337
111 3300028577 Ga0265318_10031878 Ga0265318_100318782 337
112 3300031728 Ga0316578_10032947 Ga0316578_100329472 337
113 3300031733 Ga0316577_10067356 Ga0316577_100673562 337
114 3300036712 Ga0316584_0024745 Ga0316584_0024745_2647_3663 337
115 3300044658 Ga0466972_0060698 Ga0466972_0060698_468_1484 337
116 3300046462 Ga0495651_0075786 Ga0495651_0075786_677_1696 337
117 3300005329 Ga0070683_100022075 Ga0070683_1000220753 338
118 3300005334 Ga0068869_100042201 Ga0068869_1000422012 338
119 3300005334 Ga0068869_100053210 Ga0068869_1000532102 338
120 3300005340 Ga0070689_100080017 Ga0070689_1000800171 338
121 3300005354 Ga0070675_100048907 Ga0070675_1000489072 338
122 3300005356 Ga0070674_100000071 Ga0070674_10000007141 338
123 3300005456 Ga0070678_100047130 Ga0070678_1000471302 338
124 3300005458 Ga0070681_10321523 Ga0070681_103215231 338
125 3300005459 Ga0068867_100048784 Ga0068867_1000487842 338
126 3300005530 Ga0070679_100146861 Ga0070679_1001468613 338
127 3300005544 Ga0070686_100199947 Ga0070686_1001999472 338
128 3300005615 Ga0070702_100290830 Ga0070702_1002908301 338
129 3300005840 Ga0068870_10012808 Ga0068870_100128082 338
130 3300005844 Ga0068862_100087380 Ga0068862_1000873802 338
131 3300006844 Ga0075428_100045066 Ga0075428_1000450664 338
132 3300006880 Ga0075429_100005929 Ga0075429_1000059292 338
133 3300013307 Ga0157372_10368618 Ga0157372_103686182 338
134 3300013308 Ga0157375_10134986 Ga0157375_101349861 338
135 3300014326 Ga0157380_10082115 Ga0157380_100821152 338
136 3300025907 Ga0207645_10080020 Ga0207645_100800202 338
137 3300025908 Ga0207643_10058945 Ga0207643_100589452 338
138 3300025926 Ga0207659_10120126 Ga0207659_101201262 338
139 3300025933 Ga0207706_10011225 Ga0207706_100112256 338
140 3300025936 Ga0207670_10014850 Ga0207670_100148502 338
141 3300025936 Ga0207670_10361363 Ga0207670_103613631 338
142 3300025940 Ga0207691_10016747 Ga0207691_100167473 338
143 3300025942 Ga0207689_10047763 Ga0207689_100477632 338
144 3300025942 Ga0207689_10090116 Ga0207689_100901162 338
145 3300025986 Ga0207658_10150999 Ga0207658_101509992 338
146 3300026121 Ga0207683_10019847 Ga0207683_100198475 338
147 3300028380 Ga0268265_10046727 Ga0268265_100467274 338
148 3300031507 Ga0307509_10132472 Ga0307509_101324721 338
149 3300031691 Ga0316579_10030527 Ga0316579_100305272 338
150 3300031727 Ga0316576_10001633 Ga0316576_100016335 338
151 3300031727 Ga0316576_10005631 Ga0316576_100056316 338
152 3300031727 Ga0316576_10139578 Ga0316576_101395782 338
153 3300031728 Ga0316578_10031935 Ga0316578_100319352 338
154 3300031728 Ga0316578_10033357 Ga0316578_100333571 338
155 3300032137 Ga0316585_10005063 Ga0316585_100050632 338
156 3300035398 Ga0316574_0225947 Ga0316574_0225947_39_1070 338
157 3300036712 Ga0316584_0123795 Ga0316584_0123795_424_1455 338
158 3300041512 Ga0451853_1242398 Ga0451853_1242398_363_1382 338
159 3300048915 Ga0496112_0019633 Ga0496112_0019633_2992_4041 338
160 3300049161 Ga0501305_007987 Ga0501305_007987_251_1270 338
161 3300049583 Ga0501067_0026387 Ga0501067_0026387_1051_2181 338
162 3300049585 Ga0501069_0026696 Ga0501069_0026696_166_1296 338
163 3300049588 Ga0501072_0176779 Ga0501072_0176779_577_1614 338
164 3300050508 nmdc:mga09592_52190_c1 nmdc:mga09592_52190_c1_1246_2268 338
165 3300050509 nmdc:mga0qj67_104911_c1 nmdc:mga0qj67_104911_c1_649_1680 338
166 3300050510 nmdc:mga06r32_141032_c1 nmdc:mga06r32_141032_c1_811_1833 338
167 3300053094 Ga0500566_0003571 Ga0500566_0003571_3491_4513 338
168 3300053150 Ga0500603_006336 Ga0500603_006336_905_1927 338
169 3300060353 Ga0501082_0275851 Ga0501082_0275851_194_1216 338
170 3300005293 Ga0065715_10008470 Ga0065715_100084704 339
171 3300005295 Ga0065707_10009336 Ga0065707_100093364 339
172 3300005330 Ga0070690_100114233 Ga0070690_1001142332 339
173 3300005337 Ga0070682_100021142 Ga0070682_1000211422 339
174 3300005340 Ga0070689_100363349 Ga0070689_1003633491 339
175 3300005467 Ga0070706_100291407 Ga0070706_1002914071 339
176 3300005547 Ga0070693_100058269 Ga0070693_1000582691 339
177 3300005719 Ga0068861_100440105 Ga0068861_1004401051 339
178 3300005840 Ga0068870_10094956 Ga0068870_100949562 339
179 3300006028 Ga0070717_10113512 Ga0070717_101135122 339
180 3300013306 Ga0163162_10223097 Ga0163162_102230972 339
181 3300014326 Ga0157380_10065103 Ga0157380_100651032 339
182 3300025901 Ga0207688_10031742 Ga0207688_100317422 339
183 3300025908 Ga0207643_10005267 Ga0207643_100052674 339
184 3300025936 Ga0207670_10123451 Ga0207670_101234512 339
185 3300026075 Ga0207708_10110898 Ga0207708_101108981 339
186 3300028563 Ga0265319_1033696 Ga0265319_10336961 339
187 3300028794 Ga0307515_10346664 Ga0307515_103466641 339
188 3300031728 Ga0316578_10078809 Ga0316578_100788092 339
189 3300035172 Ga0373955_0114155 Ga0373955_0114155_306_1343 339
190 3300035241 Ga0373961_0000518 Ga0373961_0000518_276_1301 339
191 3300035398 Ga0316574_0163708 Ga0316574_0163708_257_1306 339
192 3300036712 Ga0316584_0308572 Ga0316584_0308572_55_1107 339
193 3300047317 Ga0495604_0249930 Ga0495604_0249930_118_1140 339
194 3300047673 Ga0495593_0094088 Ga0495593_0094088_113_1135 339
195 iso_pu_bacteria 2890804823 2890807967 339
196 3300005353 Ga0070669_100005196 Ga0070669_1000051967 340
197 3300006042 Ga0075368_10098862 Ga0075368_100988621 340
198 3300009011 Ga0105251_10000077 Ga0105251_1000007717 340
199 3300025735 Ga0207713_1001172 Ga0207713_10011726 340
200 3300025923 Ga0207681_10019046 Ga0207681_100190462 340
201 3300048927 Ga0496124_0022429 Ga0496124_0022429_4110_5186 340
202 3300049585 Ga0501069_0008412 Ga0501069_0008412_73_1116 340
203 3300049586 Ga0501070_0000453 Ga0501070_0000453_18592_19635 340
204 3300049589 Ga0501073_0008658 Ga0501073_0008658_2310_3353 340
205 3300049590 Ga0501074_0031626 Ga0501074_0031626_537_1580 340
206 3300049742 Ga0501080_0016097 Ga0501080_0016097_3845_4888 340
207 3300049744 Ga0501083_0000910 Ga0501083_0000910_13353_14396 340
208 3300060353 Ga0501082_0020084 Ga0501082_0020084_1171_2214 340
209 3300005336 Ga0070680_100046313 Ga0070680_1000463134 341
210 3300005458 Ga0070681_10062052 Ga0070681_100620524 341
211 3300005530 Ga0070679_100056138 Ga0070679_1000561384 341
212 3300025921 Ga0207652_10014588 Ga0207652_100145886 341
213 3300031238 Ga0265332_10046717 Ga0265332_100467173 341
214 3300031249 Ga0265339_10049235 Ga0265339_100492352 341
215 3300031711 Ga0265314_10051411 Ga0265314_100514112 341
216 3300031712 Ga0265342_10066316 Ga0265342_100663162 341
217 3300034818 Ga0373950_0000025 Ga0373950_0000025_159932_160972 341
218 3300035724 Ga0373933_0017379 Ga0373933_0017379_391_1434 341
219 3300036401 Ga0373937_0006189 Ga0373937_0006189_8669_9712 341
220 3300049742 Ga0501080_0117700 Ga0501080_0117700_394_1434 341
221 3300053094 Ga0500566_0001253 Ga0500566_0001253_9635_10666 341
222 3300053102 Ga0500554_000053 Ga0500554_000053_8913_9944 341
223 3300053119 Ga0500595_000015 Ga0500595_000015_204971_206002 341
224 3300053123 Ga0500614_000246 Ga0500614_000246_5743_6774 341
225 3300053136 Ga0500559_0011533 Ga0500559_0011533_2040_3071 341
226 3300006846 Ga0075430_100181782 Ga0075430_1001817822 342
227 3300028786 Ga0307517_10030883 Ga0307517_100308834 342
228 3300028800 Ga0265338_10188163 Ga0265338_101881632 342
229 3300031507 Ga0307509_10000175 Ga0307509_1000017538 342
230 3300031911 Ga0307412_10012825 Ga0307412_100128252 342
231 3300032126 Ga0307415_100101011 Ga0307415_1001010112 342
232 3300036647 Ga0316582_0015327 Ga0316582_0015327_958_2019 342
233 3300006844 Ga0075428_100019803 Ga0075428_1000198032 343
234 3300053094 Ga0500566_0020331 Ga0500566_0020331_1641_2684 343
235 3300003322 rootL2_10154098 rootL2_101540982 344
236 3300048925 Ga0496122_0000039 Ga0496122_0000039_86975_88066 344
237 3300048926 Ga0496123_0000026 Ga0496123_0000026_87071_88162 344

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02678

Pirin

Pirin

70

196

0.91

PF05726

Pirin_C

Pirin C-terminal cupin domain

258

356

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.8417 8 312
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.8305 8 312
6d0p-assembly4.cif.gz_D 1.88 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.8219 7 314
4hlt-assembly1.cif.gz_A crystal structure of ferric e32v pirin 0.8161 9 313
5jct-assembly1.cif.gz_A crystal structure of human pirin in complex with a chemical probe pyrrolidine 24 0.8125 9 313
ID Description Score Start End Superfamily
af_F1QLW3_37_119_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8959 24 145 2.60.120.10
af_I1KYF4_44_139_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8794 21 154 2.60.120.10
af_F1QLW3_37_119_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8765 24 145 2.60.120.10
af_C0P2Q1_61_325_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8538 11 313 2.60.120.10
af_I1KYF4_44_139_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8534 21 154 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A7W0Y882-F1-model_v4 Pirin family protein 0.9948 9 223 GO:0046872
AF-A0A1M3N513-F1-model_v4 Pirin 0.9932 13 344
AF-A0A6I2X210-F1-model_v4 Pirin family protein 0.9931 7 316 GO:0046872
AF-A0A520BYC0-F1-model_v4 Pirin family protein 0.9907 8 343 GO:0046872
AF-A0A2S0N012-F1-model_v4 Pirin 0.9903 8 340 GO:0046872

Feature Viewer

pLDDT pTM Quality
95.48 0.92 High
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Predicted Structure (AlphaFold2)

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