F350401

General Info

Members Datasets Scaffolds Average Seq Length
237 176 230 227

Family's Representative Sequence

Representative Sequence 3300049742|Ga0501080_0085723|Ga0501080_0085723_15_770
Length 251
Sequence MPYDYLFSMPSPPAVVLLSGGMDSTTAAAQARADGFALHALTVRYGQRHAVELHAARRVARSLGITRHRVIDVDLAAIGGSALTDDIEVPMDRSADNLGNDIPVTYVPARNTVFLSLALGYAEVVGAFDIFIGANALDYSGYPDCRPEYLRAFEQLANLATRAGVEGTGQFRIHAPLLHLTKAQIVQLGLRLGVDFSLTHSCYAPDADGRPCGHCDACVLRAKGFREAGVVDEAVRTSSVFGLRSSTAPDD

Samples

Sample ID Description Type Environment
1 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
2 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
3 2818991457 Xanthomonas translucens 569 Isolate Unclassified
4 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
5 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
88 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
92 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
100 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
102 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
103 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
104 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
105 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
106 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
107 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
118 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
119 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
120 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
121 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
122 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
123 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
124 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
125 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
126 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
127 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
128 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
175 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
176 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.62
Metatranscriptomes 0.42
Isolates 2.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.86
Rhizosphere 83.12
Stem 0
Stem Tuber 0
Unclassified 8.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058692_1000033 3300003856 Bacteria 174393
2 Ga0065704_10000377 3300005289 Bacteria 25325
3 Ga0070670_100009734 3300005331 Bacteria 8208
4 Ga0070670_100046373 3300005331 Bacteria 3737
5 Ga0070670_100163192 3300005331 Bacteria 1931
6 Ga0070677_10005319 3300005333 Bacteria 4239
7 Ga0070666_10329977 3300005335 Bacteria 1089
8 Ga0070680_100006802 3300005336 Bacteria 8711
9 Ga0070680_100024698 3300005336 Bacteria 4804
10 Ga0070682_100109446 3300005337 Bacteria 1839
11 Ga0070675_100106626 3300005354 Bacteria 2365
12 Ga0070671_100589588 3300005355 Bacteria 960
13 Ga0070674_100020778 3300005356 Bacteria 4203
14 Ga0070673_100047713 3300005364 Bacteria 3334
15 Ga0070673_100484322 3300005364 Bacteria 1117
16 Ga0070659_100038787 3300005366 Bacteria 3717
17 Ga0070667_100273895 3300005367 Bacteria 1514
18 Ga0070711_100212769 3300005439 Bacteria 1498
19 Ga0070694_100043995 3300005444 Bacteria 2987
20 Ga0070708_100007414 3300005445 Bacteria 8778
21 Ga0070678_100019348 3300005456 Bacteria 4435
22 Ga0070662_100430214 3300005457 Bacteria 1093
23 Ga0068867_100044836 3300005459 Bacteria 3241
24 Ga0070706_100040286 3300005467 Bacteria 4312
25 Ga0070699_100002138 3300005518 Bacteria 17923
26 Ga0070697_100002379 3300005536 Bacteria 14478
27 Ga0070696_100003944 3300005546 Bacteria 9903
28 Ga0070696_100111018 3300005546 Bacteria 1975
29 Ga0070696_100322646 3300005546 Bacteria 1189
30 Ga0070696_100342818 3300005546 Bacteria 1155
31 Ga0070665_100653378 3300005548 Bacteria 1065
32 Ga0070704_100422176 3300005549 Bacteria 1142
33 Ga0070664_100567720 3300005564 Bacteria 1050
34 Ga0068857_100702534 3300005577 Bacteria 961
35 Ga0068864_100216853 3300005618 Bacteria 1764
36 Ga0068861_100253404 3300005719 Bacteria 1503
37 Ga0068863_100161899 3300005841 Bacteria 2144
38 Ga0068860_100014593 3300005843 Bacteria 7686
39 Ga0068862_100236996 3300005844 Bacteria 1657
40 Ga0068862_100454611 3300005844 Bacteria 1208
41 Ga0081455_10004924 3300005937 Bacteria 14782
42 Ga0070712_100115966 3300006175 Bacteria 2008
43 Ga0097621_100089692 3300006237 Bacteria 2571
44 Ga0068871_100202001 3300006358 Bacteria 1716
45 Ga0075433_10019235 3300006852 Bacteria 5686
46 Ga0075433_10080257 3300006852 Bacteria 2876
47 Ga0068865_100127965 3300006881 Bacteria 1899
48 Ga0075436_100176971 3300006914 Bacteria 1507
49 Ga0105251_10000076 3300009011 Bacteria 93688
50 Ga0111539_10796953 3300009094 Bacteria 1100
51 Ga0114129_11384753 3300009147 Bacteria 868
52 Ga0105243_10110341 3300009148 Bacteria 2300
53 Ga0105248_10126720 3300009177 Bacteria 2880
54 Ga0157378_10887457 3300013297 Bacteria 922
55 Ga0157375_10017037 3300013308 Bacteria 6546
56 Ga0163163_10071394 3300014325 Bacteria 3460
57 Ga0157380_10063750 3300014326 Bacteria 2956
58 Ga0157376_10295697 3300014969 Bacteria 1531
59 Ga0182005_1001730 3300015265 Bacteria 8434
60 Ga0163161_10231820 3300017792 Bacteria 1433
61 Ga0213874_10003208 3300021377 Bacteria 3607
62 Ga0207697_10035210 3300025315 Bacteria 2049
63 Ga0207713_1000308 3300025735 Bacteria 55649
64 Ga0207682_10004556 3300025893 Bacteria 5773
65 Ga0207688_10182137 3300025901 Bacteria 1253
66 Ga0207680_10000182 3300025903 Bacteria 30842
67 Ga0207680_10347200 3300025903 Bacteria 1042
68 Ga0207647_10134035 3300025904 Bacteria 1454
69 Ga0207645_10010541 3300025907 Bacteria 6346
70 Ga0207707_10002130 3300025912 Bacteria 17924
71 Ga0207707_10010399 3300025912 Bacteria 8074
72 Ga0207693_10203746 3300025915 Bacteria 1556
73 Ga0207663_10117452 3300025916 Bacteria 1815
74 Ga0207660_10030762 3300025917 Bacteria 3691
75 Ga0207652_10381068 3300025921 Bacteria 1273
76 Ga0207681_10357610 3300025923 Bacteria 1170
77 Ga0207650_10032187 3300025925 Bacteria 3793
78 Ga0207650_10097941 3300025925 Bacteria 2252
79 Ga0207644_10574772 3300025931 Bacteria 934
80 Ga0207690_10226107 3300025932 Bacteria 1434
81 Ga0207706_10437013 3300025933 Bacteria 1133
82 Ga0207709_10065209 3300025935 Bacteria 2289
83 Ga0207669_10015413 3300025937 Bacteria 3854
84 Ga0207704_10264773 3300025938 Bacteria 1298
85 Ga0207691_10001437 3300025940 Bacteria 23753
86 Ga0207679_10284280 3300025945 Bacteria 1420
87 Ga0207640_10439167 3300025981 Bacteria 1073
88 Ga0207708_10331964 3300026075 Bacteria 1243
89 Ga0207641_10730860 3300026088 Bacteria 976
90 Ga0207676_10041822 3300026095 Bacteria 3521
91 Ga0207683_10006565 3300026121 Bacteria 9959
92 Ga0209371_1000088 3300027312 Bacteria 174446
93 Ga0209971_1010219 3300027682 Bacteria 2223
94 Ga0268265_10526428 3300028380 Bacteria 1118
95 Ga0268265_10543765 3300028380 Bacteria 1101
96 Ga0268256_1000079 3300030500 Bacteria 174445
97 Ga0316575_10023923 3300031665 Bacteria 2363
98 Ga0316575_10088882 3300031665 Bacteria 1250
99 Ga0316579_10025643 3300031691 Bacteria 2664
100 Ga0316576_10078464 3300031727 Bacteria 2447
101 Ga0316576_10353255 3300031727 Bacteria 1093
102 Ga0316578_10072120 3300031728 Bacteria 2045
103 Ga0316578_10234646 3300031728 Bacteria 1101
104 Ga0316577_10111812 3300031733 Bacteria 1533
105 Ga0316577_10167606 3300031733 Bacteria 1239
106 Ga0316577_10310141 3300031733 Bacteria 894
107 Ga0307413_10059974 3300031824 Bacteria 2340
108 Ga0307407_10537287 3300031903 Bacteria 862
109 Ga0307412_10071138 3300031911 Bacteria 2374
110 Ga0307409_100011643 3300031995 Bacteria 5560
111 Ga0307409_100190143 3300031995 Bacteria 1827
112 Ga0307409_100413965 3300031995 Bacteria 1291
113 Ga0307416_100175475 3300032002 Bacteria 2001
114 Ga0307411_10017530 3300032005 Bacteria 4084
115 Ga0316583_10013924 3300032133 Bacteria 2902
116 Ga0316583_10153535 3300032133 Bacteria 801
117 Ga0316593_10033847 3300032168 Bacteria 1674
118 Ga0373948_0014014 3300034817 Bacteria 1456
119 Ga0373959_0085900 3300034820 Bacteria 731
120 Ga0373929_0058390 3300035085 Bacteria 898
121 Ga0373949_0056809 3300035090 Bacteria 999
122 Ga0373951_0015633 3300035091 Bacteria 1711
123 Ga0373932_0112160 3300035112 Bacteria 900
124 Ga0373941_0076869 3300035115 Bacteria 1120
125 Ga0373955_0038397 3300035172 Bacteria 2551
126 Ga0373961_0079311 3300035241 Bacteria 1030
127 Ga0316574_0024925 3300035398 Bacteria 3585
128 Ga0316574_0056323 3300035398 Bacteria 2459
129 Ga0373931_0010075 3300035691 Bacteria 4533
130 Ga0373931_0127049 3300035691 Bacteria 1463
131 Ga0373935_0417117 3300035692 Bacteria 966
132 Ga0316582_0064305 3300036647 Bacteria 2360
133 Ga0316584_0007078 3300036712 Bacteria 7642
134 Ga0316584_0074543 3300036712 Bacteria 2544
135 Ga0373925_0219902 3300037068 Bacteria 1516
136 Ga0395905_0023373 3300037471 Bacteria 5842
137 Ga0395905_0201390 3300037471 Bacteria 1866
138 Ga0400490_48231 3300038726 Bacteria 16721
139 Ga0400488_01872 3300038741 Bacteria 2515
140 Ga0242420_048001 3300038996 Bacteria 829
141 Ga0400483_052728 3300039062 Bacteria 1610
142 Ga0400483_086729 3300039062 Bacteria 1404
143 Ga0400483_163516 3300039062 Bacteria 14697
144 Ga0400483_218417 3300039062 Bacteria 2877
145 Ga0400483_258613 3300039062 Bacteria 3120
146 Ga0400489_91805 3300039093 Bacteria 4098
147 Ga0451793_1573728 3300041452 Bacteria 3570
148 Ga0451800_0646853 3300041459 Bacteria 12572
149 Ga0451806_252779 3300041462 Bacteria 5784
150 Ga0451804_0031755 3300041463 Bacteria 2086
151 Ga0451807_2272016 3300041486 Bacteria 2185
152 Ga0439435_0039385 3300042436 Bacteria 1317
153 Ga0439435_0122215 3300042436 Bacteria 817
154 Ga0439464_0095176 3300042439 Bacteria 901
155 Ga0451577_0186826 3300042876 Bacteria 1869
156 Ga0453684_0612732 3300044712 Bacteria 1192
157 Ga0496101_0147851 3300048904 Bacteria 1795
158 Ga0496102_0128193 3300048905 Bacteria 2373
159 Ga0496102_1384416 3300048905 Bacteria 622
160 Ga0496104_0003644 3300048907 Bacteria 13301
161 Ga0496104_0470773 3300048907 Bacteria 1168
162 Ga0496105_0502374 3300048908 Bacteria 952
163 Ga0496106_0315737 3300048909 Bacteria 1254
164 Ga0496107_0075183 3300048910 Bacteria 2459
165 Ga0496108_0004358 3300048911 Bacteria 11382
166 Ga0496109_0009010 3300048912 Bacteria 8499
167 Ga0496110_0008883 3300048913 Bacteria 8101
168 Ga0496110_0552232 3300048913 Bacteria 1047
169 Ga0496112_0186466 3300048915 Bacteria 2037
170 Ga0496113_0003101 3300048916 Bacteria 9872
171 Ga0496114_0052373 3300048917 Bacteria 3401
172 Ga0496115_0403207 3300048918 Bacteria 1109
173 Ga0496117_0003332 3300048920 Bacteria 18762
174 Ga0496119_0000978 3300048922 Bacteria 36685
175 Ga0496120_0000220 3300048923 Bacteria 98722
176 Ga0496122_0001193 3300048925 Bacteria 44317
177 Ga0496123_0000349 3300048926 Bacteria 86632
178 Ga0496124_0003469 3300048927 Bacteria 19252
179 Ga0496126_0061561 3300048929 Bacteria 3371
180 Ga0501034_0008979 3300049571 Bacteria 10501
181 Ga0501034_0101661 3300049571 Bacteria 2868
182 Ga0501038_0018513 3300049574 Bacteria 6289
183 Ga0501041_0223045 3300049577 Bacteria 1183
184 Ga0501042_0778756 3300049578 Unclassified 696
185 Ga0501047_0746349 3300049581 Unclassified 795
186 Ga0501067_0001287 3300049583 Bacteria 13603
187 Ga0501067_0021474 3300049583 Bacteria 3572
188 Ga0501067_0030717 3300049583 Bacteria 2980
189 Ga0501067_0186433 3300049583 Bacteria 1155
190 Ga0501067_0186892 3300049583 Bacteria 1154
191 Ga0501068_0003826 3300049584 Bacteria 8164
192 Ga0501068_0027522 3300049584 Bacteria 3357
193 Ga0501069_0000750 3300049585 Bacteria 15165
194 Ga0501069_0004771 3300049585 Bacteria 7017
195 Ga0501069_0009983 3300049585 Bacteria 5019
196 Ga0501069_0051197 3300049585 Bacteria 2298
197 Ga0501070_0018564 3300049586 Bacteria 5834
198 Ga0501070_0066405 3300049586 Bacteria 2987
199 Ga0501070_0100129 3300049586 Bacteria 2397
200 Ga0501070_0163919 3300049586 Bacteria 1832
201 Ga0501071_0002541 3300049587 Bacteria 11110
202 Ga0501071_0003078 3300049587 Bacteria 10338
203 Ga0501072_0002641 3300049588 Bacteria 13433
204 Ga0501072_0035160 3300049588 Bacteria 3927
205 Ga0501072_0523664 3300049588 Bacteria 937
206 Ga0501073_0002519 3300049589 Bacteria 13688
207 Ga0501073_0088631 3300049589 Bacteria 2151
208 Ga0501074_0001140 3300049590 Bacteria 17400
209 Ga0501074_0007845 3300049590 Bacteria 7731
210 Ga0501080_0013772 3300049742 Bacteria 7446
211 Ga0501080_0021326 3300049742 Bacteria 5996
212 Ga0501080_0085723 3300049742 Bacteria 2927
213 Ga0501083_0003866 3300049744 Bacteria 10519
214 Ga0501083_0004908 3300049744 Bacteria 9462
215 Ga0501083_0516929 3300049744 Bacteria 777
216 Ga0501045_0378411 3300049824 Bacteria 1054
217 nmdc:mga0n895_163392_c1 3300050512 Bacteria 2258
218 nmdc:mga0n895_324396_c1 3300050512 Bacteria 1560
219 nmdc:mga0a205_129873_c1 3300050515 Bacteria 2420
220 nmdc:mga0a205_28654_c1 3300050515 Bacteria 5325
221 Ga0495601_0000513 3300053077 Bacteria 20410
222 Ga0495619_0014680 3300053085 Bacteria 4948
223 Ga0495619_0198307 3300053085 Bacteria 1390
224 Ga0501084_0000138 3300054114 Bacteria 54910
225 Ga0501084_0005169 3300054114 Bacteria 10676
226 Ga0501084_0553180 3300054114 Bacteria 972
227 Ga0501082_0007067 3300060353 Bacteria 9686
228 Ga0501082_0014256 3300060353 Bacteria 6839
229 Ga0530510_0338621 3300061734 Bacteria 1129
230 Ga0530510_0519664 3300061734 Bacteria 903

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_1384416 Ga0496102_1384416_15_611 189
2 3300048908 Ga0496105_0502374 Ga0496105_0502374_60_710 195
3 3300049578 Ga0501042_0778756 Ga0501042_0778756_24_644 200
4 3300005564 Ga0070664_100567720 Ga0070664_1005677202 201
5 3300049583 Ga0501067_0186433 Ga0501067_0186433_348_1046 203
6 3300061734 Ga0530510_0338621 Ga0530510_0338621_51_749 203
7 3300031903 Ga0307407_10537287 Ga0307407_105372871 206
8 3300031995 Ga0307409_100011643 Ga0307409_1000116434 206
9 3300032002 Ga0307416_100175475 Ga0307416_1001754752 206
10 3300032005 Ga0307411_10017530 Ga0307411_100175302 206
11 3300049587 Ga0501071_0002541 Ga0501071_0002541_10107_10745 206
12 3300049742 Ga0501080_0013772 Ga0501080_0013772_3759_4397 206
13 3300060353 Ga0501082_0014256 Ga0501082_0014256_4481_5119 206
14 3300061734 Ga0530510_0519664 Ga0530510_0519664_122_760 206
15 iso_pu_bacteria 2747842501 2748016674 206
16 iso_pu_bacteria 2852684882 2852686747 206
17 3300005439 Ga0070711_100212769 Ga0070711_1002127692 208
18 3300006175 Ga0070712_100115966 Ga0070712_1001159662 208
19 3300025915 Ga0207693_10203746 Ga0207693_102037463 208
20 3300037068 Ga0373925_0219902 Ga0373925_0219902_15_713 208
21 3300048904 Ga0496101_0147851 Ga0496101_0147851_654_1352 208
22 3300048905 Ga0496102_0128193 Ga0496102_0128193_298_996 208
23 3300048917 Ga0496114_0052373 Ga0496114_0052373_2219_2917 208
24 3300034820 Ga0373959_0085900 Ga0373959_0085900_21_719 209
25 3300035085 Ga0373929_0058390 Ga0373929_0058390_125_823 209
26 3300035112 Ga0373932_0112160 Ga0373932_0112160_115_813 209
27 3300035241 Ga0373961_0079311 Ga0373961_0079311_111_809 209
28 3300035691 Ga0373931_0127049 Ga0373931_0127049_194_892 209
29 3300038996 Ga0242420_048001 Ga0242420_048001_28_726 209
30 3300009011 Ga0105251_10000076 Ga0105251_1000007629 210
31 3300009147 Ga0114129_11384753 Ga0114129_113847531 210
32 3300009148 Ga0105243_10110341 Ga0105243_101103413 210
33 3300015265 Ga0182005_1001730 Ga0182005_10017301 210
34 3300048918 Ga0496115_0403207 Ga0496115_0403207_415_1074 210
35 3300048920 Ga0496117_0003332 Ga0496117_0003332_87_719 210
36 3300048922 Ga0496119_0000978 Ga0496119_0000978_7278_7910 210
37 3300048923 Ga0496120_0000220 Ga0496120_0000220_70579_71211 210
38 3300048925 Ga0496122_0001193 Ga0496122_0001193_1681_2313 210
39 3300048926 Ga0496123_0000349 Ga0496123_0000349_84334_84966 210
40 3300048927 Ga0496124_0003469 Ga0496124_0003469_1756_2388 210
41 3300048929 Ga0496126_0061561 Ga0496126_0061561_1869_2501 210
42 3300049571 Ga0501034_0101661 Ga0501034_0101661_784_1440 210
43 3300049581 Ga0501047_0746349 Ga0501047_0746349_52_702 210
44 3300049583 Ga0501067_0001287 Ga0501067_0001287_2724_3380 210
45 3300049583 Ga0501067_0030717 Ga0501067_0030717_1938_2630 210
46 3300049584 Ga0501068_0027522 Ga0501068_0027522_465_1121 210
47 3300049585 Ga0501069_0000750 Ga0501069_0000750_3284_3940 210
48 3300049586 Ga0501070_0100129 Ga0501070_0100129_1622_2278 210
49 3300049588 Ga0501072_0035160 Ga0501072_0035160_348_1004 210
50 3300049589 Ga0501073_0002519 Ga0501073_0002519_1630_2286 210
51 3300049590 Ga0501074_0007845 Ga0501074_0007845_6975_7631 210
52 3300049744 Ga0501083_0003866 Ga0501083_0003866_2892_3548 210
53 3300049744 Ga0501083_0516929 Ga0501083_0516929_69_761 210
54 3300050512 nmdc:mga0n895_163392_c1 nmdc:mga0n895_163392_c1_1346_2008 210
55 3300054114 Ga0501084_0000138 Ga0501084_0000138_21083_21739 210
56 3300049571 Ga0501034_0008979 Ga0501034_0008979_7874_8551 216
57 3300049583 Ga0501067_0021474 Ga0501067_0021474_1987_2664 216
58 3300049584 Ga0501068_0003826 Ga0501068_0003826_543_1220 216
59 3300049585 Ga0501069_0004771 Ga0501069_0004771_3814_4491 216
60 3300049586 Ga0501070_0018564 Ga0501070_0018564_2905_3582 216
61 3300049587 Ga0501071_0003078 Ga0501071_0003078_7198_7875 216
62 3300049588 Ga0501072_0002641 Ga0501072_0002641_11670_12347 216
63 3300049589 Ga0501073_0088631 Ga0501073_0088631_344_1021 216
64 3300049590 Ga0501074_0001140 Ga0501074_0001140_9765_10442 216
65 3300049742 Ga0501080_0021326 Ga0501080_0021326_3256_3933 216
66 3300049744 Ga0501083_0004908 Ga0501083_0004908_2785_3462 216
67 3300054114 Ga0501084_0005169 Ga0501084_0005169_3064_3741 216
68 3300060353 Ga0501082_0007067 Ga0501082_0007067_6939_7616 216
69 3300005354 Ga0070675_100106626 Ga0070675_1001066262 217
70 3300005356 Ga0070674_100020778 Ga0070674_1000207783 217
71 3300005456 Ga0070678_100019348 Ga0070678_1000193483 217
72 3300005459 Ga0068867_100044836 Ga0068867_1000448364 217
73 3300005548 Ga0070665_100653378 Ga0070665_1006533782 217
74 3300006881 Ga0068865_100127965 Ga0068865_1001279652 217
75 3300014326 Ga0157380_10063750 Ga0157380_100637504 217
76 3300025893 Ga0207682_10004556 Ga0207682_100045564 217
77 3300025937 Ga0207669_10015413 Ga0207669_100154132 217
78 3300025940 Ga0207691_10001437 Ga0207691_1000143711 217
79 3300026121 Ga0207683_10006565 Ga0207683_100065656 217
80 3300039062 Ga0400483_258613 Ga0400483_258613_1599_2312 217
81 iso_pu_bacteria 2643221581 2643915080 217
82 iso_pu_bacteria 2818991457 2819660871 217
83 iso_pu_bacteria 8021622325 8021623640 217
84 iso_pu_bacteria 8021626552 8021627438 217
85 iso_pu_bacteria 8021648035 8021650595 217
86 3300027682 Ga0209971_1010219 Ga0209971_10102193 218
87 3300032168 Ga0316593_10033847 Ga0316593_100338472 218
88 3300038726 Ga0400490_48231 Ga0400490_48231_12035_12715 218
89 3300042439 Ga0439464_0095176 Ga0439464_0095176_75_746 218
90 3300049586 Ga0501070_0066405 Ga0501070_0066405_1265_1969 218
91 3300005331 Ga0070670_100046373 Ga0070670_1000463732 219
92 3300005335 Ga0070666_10329977 Ga0070666_103299772 219
93 3300005355 Ga0070671_100589588 Ga0070671_1005895882 219
94 3300005364 Ga0070673_100047713 Ga0070673_1000477133 219
95 3300005364 Ga0070673_100484322 Ga0070673_1004843222 219
96 3300005367 Ga0070667_100273895 Ga0070667_1002738952 219
97 3300005457 Ga0070662_100430214 Ga0070662_1004302142 219
98 3300005719 Ga0068861_100253404 Ga0068861_1002534042 219
99 3300005841 Ga0068863_100161899 Ga0068863_1001618992 219
100 3300005844 Ga0068862_100454611 Ga0068862_1004546111 219
101 3300006237 Ga0097621_100089692 Ga0097621_1000896922 219
102 3300006358 Ga0068871_100202001 Ga0068871_1002020012 219
103 3300009177 Ga0105248_10126720 Ga0105248_101267202 219
104 3300013297 Ga0157378_10887457 Ga0157378_108874572 219
105 3300014969 Ga0157376_10295697 Ga0157376_102956972 219
106 3300025903 Ga0207680_10000182 Ga0207680_1000018213 219
107 3300025903 Ga0207680_10347200 Ga0207680_103472002 219
108 3300025925 Ga0207650_10032187 Ga0207650_100321872 219
109 3300025931 Ga0207644_10574772 Ga0207644_105747722 219
110 3300025933 Ga0207706_10437013 Ga0207706_104370132 219
111 3300025938 Ga0207704_10264773 Ga0207704_102647732 219
112 3300025945 Ga0207679_10284280 Ga0207679_102842802 219
113 3300025981 Ga0207640_10439167 Ga0207640_104391672 219
114 3300028380 Ga0268265_10526428 Ga0268265_105264282 219
115 3300031665 Ga0316575_10023923 Ga0316575_100239232 219
116 3300031665 Ga0316575_10088882 Ga0316575_100888822 219
117 3300031691 Ga0316579_10025643 Ga0316579_100256432 219
118 3300031727 Ga0316576_10078464 Ga0316576_100784643 219
119 3300031727 Ga0316576_10353255 Ga0316576_103532552 219
120 3300031728 Ga0316578_10072120 Ga0316578_100721202 219
121 3300031728 Ga0316578_10234646 Ga0316578_102346462 219
122 3300031733 Ga0316577_10111812 Ga0316577_101118122 219
123 3300031733 Ga0316577_10167606 Ga0316577_101676062 219
124 3300031733 Ga0316577_10310141 Ga0316577_103101412 219
125 3300031824 Ga0307413_10059974 Ga0307413_100599742 219
126 3300031911 Ga0307412_10071138 Ga0307412_100711384 219
127 3300031995 Ga0307409_100413965 Ga0307409_1004139652 219
128 3300032133 Ga0316583_10013924 Ga0316583_100139242 219
129 3300032133 Ga0316583_10153535 Ga0316583_101535351 219
130 3300035398 Ga0316574_0024925 Ga0316574_0024925_1281_1967 219
131 3300035398 Ga0316574_0056323 Ga0316574_0056323_1754_2443 219
132 3300036647 Ga0316582_0064305 Ga0316582_0064305_39_719 219
133 3300036712 Ga0316584_0007078 Ga0316584_0007078_4260_4949 219
134 3300036712 Ga0316584_0074543 Ga0316584_0074543_980_1669 219
135 3300042436 Ga0439435_0039385 Ga0439435_0039385_443_1120 219
136 3300042436 Ga0439435_0122215 Ga0439435_0122215_50_727 219
137 3300005331 Ga0070670_100163192 Ga0070670_1001631923 220
138 3300005333 Ga0070677_10005319 Ga0070677_100053191 220
139 3300005336 Ga0070680_100024698 Ga0070680_1000246982 220
140 3300005337 Ga0070682_100109446 Ga0070682_1001094462 220
141 3300005366 Ga0070659_100038787 Ga0070659_1000387872 220
142 3300005444 Ga0070694_100043995 Ga0070694_1000439952 220
143 3300005518 Ga0070699_100002138 Ga0070699_10000213810 220
144 3300005536 Ga0070697_100002379 Ga0070697_1000023795 220
145 3300005546 Ga0070696_100003944 Ga0070696_1000039448 220
146 3300005546 Ga0070696_100111018 Ga0070696_1001110183 220
147 3300005546 Ga0070696_100322646 Ga0070696_1003226461 220
148 3300005549 Ga0070704_100422176 Ga0070704_1004221762 220
149 3300005577 Ga0068857_100702534 Ga0068857_1007025341 220
150 3300005618 Ga0068864_100216853 Ga0068864_1002168532 220
151 3300005843 Ga0068860_100014593 Ga0068860_1000145934 220
152 3300005844 Ga0068862_100236996 Ga0068862_1002369962 220
153 3300006852 Ga0075433_10080257 Ga0075433_100802574 220
154 3300006914 Ga0075436_100176971 Ga0075436_1001769711 220
155 3300009094 Ga0111539_10796953 Ga0111539_107969532 220
156 3300013308 Ga0157375_10017037 Ga0157375_100170376 220
157 3300014325 Ga0163163_10071394 Ga0163163_100713942 220
158 3300017792 Ga0163161_10231820 Ga0163161_102318201 220
159 3300025315 Ga0207697_10035210 Ga0207697_100352102 220
160 3300025901 Ga0207688_10182137 Ga0207688_101821372 220
161 3300025904 Ga0207647_10134035 Ga0207647_101340351 220
162 3300025907 Ga0207645_10010541 Ga0207645_100105415 220
163 3300025912 Ga0207707_10010399 Ga0207707_100103994 220
164 3300025916 Ga0207663_10117452 Ga0207663_101174523 220
165 3300025917 Ga0207660_10030762 Ga0207660_100307624 220
166 3300025921 Ga0207652_10381068 Ga0207652_103810682 220
167 3300025923 Ga0207681_10357610 Ga0207681_103576102 220
168 3300025932 Ga0207690_10226107 Ga0207690_102261072 220
169 3300026075 Ga0207708_10331964 Ga0207708_103319641 220
170 3300026088 Ga0207641_10730860 Ga0207641_107308602 220
171 3300026095 Ga0207676_10041822 Ga0207676_100418224 220
172 3300028380 Ga0268265_10543765 Ga0268265_105437651 220
173 3300034817 Ga0373948_0014014 Ga0373948_0014014_566_1264 220
174 3300035090 Ga0373949_0056809 Ga0373949_0056809_22_720 220
175 3300035091 Ga0373951_0015633 Ga0373951_0015633_486_1184 220
176 3300035115 Ga0373941_0076869 Ga0373941_0076869_187_885 220
177 3300035691 Ga0373931_0010075 Ga0373931_0010075_1167_1865 220
178 3300035692 Ga0373935_0417117 Ga0373935_0417117_28_726 220
179 3300037471 Ga0395905_0023373 Ga0395905_0023373_4937_5635 220
180 3300042876 Ga0451577_0186826 Ga0451577_0186826_845_1543 220
181 3300044712 Ga0453684_0612732 Ga0453684_0612732_165_863 220
182 3300048907 Ga0496104_0003644 Ga0496104_0003644_7459_8157 220
183 3300048907 Ga0496104_0470773 Ga0496104_0470773_148_846 220
184 3300048909 Ga0496106_0315737 Ga0496106_0315737_51_749 220
185 3300048910 Ga0496107_0075183 Ga0496107_0075183_90_788 220
186 3300048911 Ga0496108_0004358 Ga0496108_0004358_5587_6285 220
187 3300048912 Ga0496109_0009010 Ga0496109_0009010_1253_1951 220
188 3300048913 Ga0496110_0008883 Ga0496110_0008883_6435_7133 220
189 3300048913 Ga0496110_0552232 Ga0496110_0552232_294_1028 220
190 3300048915 Ga0496112_0186466 Ga0496112_0186466_623_1321 220
191 3300048916 Ga0496113_0003101 Ga0496113_0003101_8424_9122 220
192 3300049577 Ga0501041_0223045 Ga0501041_0223045_405_1166 220
193 3300049583 Ga0501067_0186892 Ga0501067_0186892_446_1132 220
194 3300049588 Ga0501072_0523664 Ga0501072_0523664_164_925 220
195 3300049824 Ga0501045_0378411 Ga0501045_0378411_169_930 220
196 3300050512 nmdc:mga0n895_324396_c1 nmdc:mga0n895_324396_c1_615_1313 220
197 3300050515 nmdc:mga0a205_129873_c1 nmdc:mga0a205_129873_c1_11_709 220
198 3300003856 Ga0058692_1000033 Ga0058692_100003397 221
199 3300005289 Ga0065704_10000377 Ga0065704_1000037716 221
200 3300005331 Ga0070670_100009734 Ga0070670_1000097344 221
201 3300005336 Ga0070680_100006802 Ga0070680_1000068024 221
202 3300005445 Ga0070708_100007414 Ga0070708_10000741410 221
203 3300005467 Ga0070706_100040286 Ga0070706_1000402864 221
204 3300005546 Ga0070696_100342818 Ga0070696_1003428182 221
205 3300005937 Ga0081455_10004924 Ga0081455_100049244 221
206 3300006852 Ga0075433_10019235 Ga0075433_100192355 221
207 3300021377 Ga0213874_10003208 Ga0213874_100032083 221
208 3300025735 Ga0207713_1000308 Ga0207713_100030825 221
209 3300025912 Ga0207707_10002130 Ga0207707_100021303 221
210 3300025925 Ga0207650_10097941 Ga0207650_100979412 221
211 3300025935 Ga0207709_10065209 Ga0207709_100652093 221
212 3300027312 Ga0209371_1000088 Ga0209371_100008839 221
213 3300030500 Ga0268256_1000079 Ga0268256_100007998 221
214 3300031995 Ga0307409_100190143 Ga0307409_1001901432 221
215 3300035172 Ga0373955_0038397 Ga0373955_0038397_938_1693 221
216 3300037471 Ga0395905_0201390 Ga0395905_0201390_142_864 221
217 3300038741 Ga0400488_01872 Ga0400488_01872_789_1523 221
218 3300039062 Ga0400483_052728 Ga0400483_052728_444_1136 221
219 3300039062 Ga0400483_086729 Ga0400483_086729_130_822 221
220 3300039062 Ga0400483_163516 Ga0400483_163516_3983_4675 221
221 3300039062 Ga0400483_218417 Ga0400483_218417_163_864 221
222 3300039093 Ga0400489_91805 Ga0400489_91805_1041_1775 221
223 3300041452 Ga0451793_1573728 Ga0451793_1573728_1759_2424 221
224 3300041459 Ga0451800_0646853 Ga0451800_0646853_8092_8757 221
225 3300041462 Ga0451806_252779 Ga0451806_252779_3881_4546 221
226 3300041463 Ga0451804_0031755 Ga0451804_0031755_75_740 221
227 3300041486 Ga0451807_2272016 Ga0451807_2272016_272_937 221
228 3300049574 Ga0501038_0018513 Ga0501038_0018513_5312_6016 221
229 3300049585 Ga0501069_0009983 Ga0501069_0009983_961_1659 221
230 3300049585 Ga0501069_0051197 Ga0501069_0051197_739_1443 221
231 3300049586 Ga0501070_0163919 Ga0501070_0163919_138_842 221
232 3300049742 Ga0501080_0085723 Ga0501080_0085723_15_770 221
233 3300050515 nmdc:mga0a205_28654_c1 nmdc:mga0a205_28654_c1_3104_3790 221
234 3300053077 Ga0495601_0000513 Ga0495601_0000513_11374_12057 221
235 3300053085 Ga0495619_0014680 Ga0495619_0014680_3467_4150 221
236 3300053085 Ga0495619_0198307 Ga0495619_0198307_19_741 221
237 3300054114 Ga0501084_0553180 Ga0501084_0553180_103_858 221

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06508

QueC

Queuosine biosynthesis protein QueC

13

229

0.95

PF00733

Asn_synthase

Asparagine synthase

9

90

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.846 1 213
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8414 1 213
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8299 1 213
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8253 1 213
2pg3-assembly1.cif.gz_A-2 crystal structure of a queuosine biosynthesis protein quec (eca1155) from erwinia carotovora subsp. atroseptica scri1043 at 2.40 a resolution 0.8039 1 211
ID Description Score Start End Superfamily
af_Q8IJK4_450_726_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8897 5 64 3.40.50.620
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8643 1 221 3.40.50.620
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8606 1 221 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8366 1 212 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8111 1 212 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A838MZC0-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9869 1 69
AF-A0A7W1IKR6-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9798 156 221
AF-A0A838MZC0-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.973 1 69
AF-A0A6P0EMN0-F1-model_v4 deleted 0.9697 1 66
AF-A0A651I4A2-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9682 87 221

Feature Viewer

pLDDT pTM Quality
85.89 0.86 High
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Predicted Structure (AlphaFold2)

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