F350187

General Info

Members Datasets Scaffolds Average Seq Length
237 181 474 243

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0249500|Ga0316584_0249500_26_853
Length 267
Sequence MADNDKIRDPEKDPNVSTVSDFPHHSWMFRHHGKIERNAFLLLVFSFIVVAIGGIVQIVPLFYLDNTIEEVEGMRPYSPLELAGRNIYVREGCYVCHSQMIRVMRDEVQRYGHYSLAAESMYDHPFQWGSKRTGPDLARIGGRYSDDWHRAHFQNPRDLVPESIMPAYPWLARTPIDSSNIEAVMRANRASGVPYTDEMLAEARADFRTQADPDTGDVDALLARYPKAQARNFDGAPGESELDAVIAYLQMLGTLVDFSTFEPDASR

Samples

Sample ID Description Type Environment
1 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
2 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
50 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
93 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
94 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
95 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
103 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
111 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
112 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
119 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
120 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
151 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
152 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
159 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
166 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
167 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
168 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
169 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
172 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
177 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
178 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
179 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
180 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
181 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.36
Metatranscriptomes 2.53
Isolates 2.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.5
Nodule 0.42
Rhizoplane 6.75
Rhizosphere 67.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316584_0249500 3300036712 Bacteria 1297
2 Ga0055524_1000221 3300003775 Bacteria 60461
3 Ga0070658_10080188 3300005327 Bacteria 2681
4 Ga0068869_100163585 3300005334 Bacteria 1734
5 Ga0070680_100027280 3300005336 Bacteria 4573
6 Ga0070660_100101809 3300005339 Bacteria 2276
7 Ga0070668_100000104 3300005347 Bacteria 51950
8 Ga0070668_100012062 3300005347 Bacteria 6438
9 Ga0070668_100018696 3300005347 Bacteria 5203
10 Ga0070669_100001184 3300005353 Bacteria 18986
11 Ga0070671_100007531 3300005355 Bacteria 8706
12 Ga0070667_100034126 3300005367 Bacteria 4255
13 Ga0070667_100246512 3300005367 Bacteria 1596
14 Ga0070681_10289636 3300005458 Bacteria 1547
15 Ga0070679_100506678 3300005530 Bacteria 1151
16 Ga0070665_100000169 3300005548 Bacteria 118043
17 Ga0068855_100125452 3300005563 Bacteria 2936
18 Ga0068859_100038523 3300005617 Bacteria 4796
19 Ga0068864_100000233 3300005618 Bacteria 49794
20 Ga0068863_100105476 3300005841 Bacteria 2681
21 Ga0068863_100256457 3300005841 Bacteria 1690
22 Ga0068858_100000587 3300005842 Bacteria 38232
23 Ga0068858_100394753 3300005842 Bacteria 1329
24 Ga0068860_100089943 3300005843 Bacteria 2923
25 Ga0068862_100251494 3300005844 Bacteria 1611
26 Ga0068862_100408170 3300005844 Bacteria 1272
27 Ga0081455_10008578 3300005937 Bacteria 10608
28 Ga0075368_10037582 3300006042 Bacteria 1894
29 Ga0075362_10031437 3300006177 Bacteria 2297
30 Ga0075367_10000277 3300006178 Bacteria 17775
31 Ga0075367_10019666 3300006178 Bacteria 3748
32 Ga0075367_10228830 3300006178 Bacteria 1164
33 Ga0075428_100058340 3300006844 Bacteria 4226
34 Ga0075431_100351860 3300006847 Bacteria 1481
35 Ga0075433_10586486 3300006852 Bacteria 979
36 Ga0097620_100038523 3300006931 Bacteria 4796
37 Ga0075435_100053826 3300007076 Bacteria 3247
38 Ga0105251_10003202 3300009011 Bacteria 12085
39 Ga0111539_10472860 3300009094 Bacteria 1459
40 Ga0111539_10540419 3300009094 Bacteria 1358
41 Ga0105247_10118169 3300009101 Bacteria 1715
42 Ga0114129_10029768 3300009147 Bacteria 7732
43 Ga0105241_10153826 3300009174 Bacteria 1884
44 Ga0105248_10025207 3300009177 Bacteria 6611
45 Ga0105248_10308621 3300009177 Bacteria 1782
46 Ga0105237_10372382 3300009545 Bacteria 1433
47 Ga0105238_10137006 3300009551 Bacteria 2426
48 Ga0105249_10052696 3300009553 Bacteria 3716
49 Ga0105239_10044553 3300010375 Bacteria 4863
50 Ga0105239_11083057 3300010375 Bacteria 922
51 Ga0105246_10121869 3300011119 Bacteria 1934
52 Ga0105246_10336253 3300011119 Bacteria 1232
53 Ga0105246_10398498 3300011119 Bacteria 1142
54 Ga0157378_10085580 3300013297 Bacteria 2856
55 Ga0163162_10005912 3300013306 Bacteria 11838
56 Ga0157372_10716984 3300013307 Bacteria 1163
57 Ga0157375_10145564 3300013308 Bacteria 2500
58 Ga0163163_10033641 3300014325 Bacteria 4960
59 Ga0163163_10171831 3300014325 Bacteria 2214
60 Ga0157380_10227097 3300014326 Bacteria 1674
61 Ga0182008_10117992 3300014497 Bacteria 1317
62 Ga0209437_102303 3300025233 Bacteria 3749
63 Ga0209233_1000182 3300025261 Bacteria 137671
64 Ga0209565_1000010 3300025263 Bacteria 687724
65 Ga0209455_1006444 3300025272 Bacteria 3460
66 Ga0209673_1004262 3300025273 Bacteria 7775
67 Ga0209675_1030484 3300025291 Bacteria 1286
68 Ga0209256_1000012 3300025299 Bacteria 790371
69 Ga0209257_1000466 3300025304 Bacteria 73785
70 Ga0207713_1001813 3300025735 Bacteria 16314
71 Ga0207710_10129811 3300025900 Bacteria 1210
72 Ga0207705_10169174 3300025909 Bacteria 1645
73 Ga0207681_10001199 3300025923 Bacteria 16657
74 Ga0207694_10029985 3300025924 Bacteria 4154
75 Ga0207687_10004556 3300025927 Bacteria 9223
76 Ga0207644_10000519 3300025931 Bacteria 24938
77 Ga0207711_10005770 3300025941 Bacteria 10458
78 Ga0207711_10239399 3300025941 Bacteria 1664
79 Ga0207679_10248212 3300025945 Bacteria 1512
80 Ga0207712_10031847 3300025961 Bacteria 3555
81 Ga0207668_10017846 3300025972 Bacteria 4454
82 Ga0207658_10037137 3300025986 Bacteria 3497
83 Ga0207658_10057559 3300025986 Bacteria 2889
84 Ga0207703_10000409 3300026035 Bacteria 45646
85 Ga0207703_10004594 3300026035 Bacteria 11298
86 Ga0207708_10383802 3300026075 Bacteria 1159
87 Ga0207641_10005539 3300026088 Bacteria 10768
88 Ga0207641_10093152 3300026088 Bacteria 2640
89 Ga0207641_10179146 3300026088 Bacteria 1940
90 Ga0207676_10000150 3300026095 Bacteria 60517
91 Ga0207675_100154956 3300026118 Bacteria 2183
92 Ga0207683_10255946 3300026121 Bacteria 1598
93 Ga0207428_10195997 3300027907 Bacteria 1521
94 Ga0268264_10015699 3300028381 Bacteria 6203
95 Ga0268264_10457453 3300028381 Bacteria 1238
96 Ga0265340_10012510 3300031247 Bacteria 4480
97 Ga0307508_10007169 3300031616 Bacteria 10381
98 Ga0316575_10044386 3300031665 Bacteria 1763
99 Ga0316579_10046923 3300031691 Bacteria 2016
100 Ga0316576_10015353 3300031727 Bacteria 5138
101 Ga0316578_10015708 3300031728 Bacteria 4078
102 Ga0307405_10081598 3300031731 Bacteria 2114
103 Ga0316577_10048839 3300031733 Bacteria 2362
104 Ga0307413_10001824 3300031824 Bacteria 8370
105 Ga0307410_10009198 3300031852 Bacteria 5528
106 Ga0307410_10252976 3300031852 Bacteria 1370
107 Ga0307406_10045777 3300031901 Bacteria 2749
108 Ga0307406_10050416 3300031901 Bacteria 2639
109 Ga0307412_10000638 3300031911 Bacteria 20422
110 Ga0307416_100045278 3300032002 Bacteria 3463
111 Ga0307416_100301747 3300032002 Bacteria 1592
112 Ga0307414_10016298 3300032004 Bacteria 4514
113 Ga0307414_10186021 3300032004 Bacteria 1676
114 Ga0307411_10034435 3300032005 Bacteria 3152
115 Ga0307411_10299155 3300032005 Bacteria 1290
116 Ga0307415_100344883 3300032126 Bacteria 1251
117 Ga0316583_10005656 3300032133 Bacteria 4494
118 Ga0316585_10017811 3300032137 Bacteria 2150
119 Ga0316580_10007493 3300032139 Bacteria 3251
120 Ga0316593_10001547 3300032168 Bacteria 5117
121 Ga0307510_10000248 3300033180 Bacteria 48764
122 Ga0316592_1000532 3300033524 Bacteria 5385
123 Ga0316586_1000846 3300033527 Bacteria 3209
124 Ga0316588_1001348 3300033528 Bacteria 3986
125 Ga0316587_1005267 3300033529 Bacteria 1931
126 Ga0316596_1000370 3300033541 Bacteria 7397
127 Ga0373941_0033346 3300035115 Bacteria 1547
128 Ga0316574_0018044 3300035398 Bacteria 4141
129 Ga0316574_0060544 3300035398 Bacteria 2377
130 Ga0316574_0306475 3300035398 Bacteria 1009
131 Ga0373933_0064298 3300035724 Bacteria 2219
132 Ga0373947_0091002 3300035725 Bacteria 1903
133 Ga0373937_0056149 3300036401 Bacteria 3616
134 Ga0373937_0301434 3300036401 Bacteria 1515
135 Ga0316584_0003615 3300036712 Bacteria 10114
136 Ga0373925_0136245 3300037068 Bacteria 1919
137 Ga0316581_0012719 3300037588 Bacteria 2373
138 Ga0395901_0000247 3300038443 Bacteria 67420
139 Ga0400483_051905 3300039062 Bacteria 1538
140 Ga0400483_165238 3300039062 Bacteria 3317
141 Ga0400483_276729 3300039062 Bacteria 4872
142 Ga0451841_1394806 3300041498 Bacteria 1075
143 Ga0495605_0043095 3300046474 Bacteria 2239
144 Ga0495583_0000087 3300046506 Bacteria 164974
145 Ga0495632_0001911 3300046519 Bacteria 16665
146 Ga0495648_0000049 3300046524 Bacteria 164366
147 Ga0495625_0000223 3300046660 Bacteria 89528
148 Ga0495657_0084999 3300046675 Bacteria 2040
149 Ga0495647_0002465 3300046681 Bacteria 5843
150 Ga0495671_0000042 3300046692 Bacteria 165201
151 Ga0495673_0000111 3300047469 Bacteria 164974
152 Ga0496101_0030420 3300048904 Bacteria 3785
153 Ga0496101_0708671 3300048904 Bacteria 794
154 Ga0496102_0000472 3300048905 Bacteria 44602
155 Ga0496102_0118087 3300048905 Bacteria 2475
156 Ga0496103_0000318 3300048906 Bacteria 44504
157 Ga0496103_0099987 3300048906 Bacteria 1835
158 Ga0496106_0012224 3300048909 Bacteria 6335
159 Ga0496107_0010478 3300048910 Bacteria 6443
160 Ga0496107_0356162 3300048910 Bacteria 1089
161 Ga0496109_0036025 3300048912 Bacteria 4466
162 Ga0496111_0099749 3300048914 Bacteria 2133
163 Ga0496112_0019170 3300048915 Bacteria 6451
164 Ga0496113_0091662 3300048916 Bacteria 2343
165 Ga0496114_0104572 3300048917 Bacteria 2421
166 Ga0496114_0402445 3300048917 Bacteria 1212
167 Ga0496115_0109226 3300048918 Bacteria 2271
168 Ga0496116_0001661 3300048919 Bacteria 24466
169 Ga0496116_0036219 3300048919 Bacteria 3456
170 Ga0496117_0000946 3300048920 Bacteria 44400
171 Ga0496117_0022756 3300048920 Bacteria 5020
172 Ga0496117_0036141 3300048920 Bacteria 3700
173 Ga0496118_0000133 3300048921 Bacteria 131319
174 Ga0496118_0049609 3300048921 Bacteria 3231
175 Ga0496118_0085815 3300048921 Bacteria 2190
176 Ga0496119_0063886 3300048922 Bacteria 2188
177 Ga0496121_0027519 3300048924 Bacteria 5319
178 Ga0496121_0034147 3300048924 Bacteria 4583
179 Ga0496121_0277820 3300048924 Bacteria 1147
180 Ga0496122_0038191 3300048925 Bacteria 3852
181 Ga0496122_0199357 3300048925 Bacteria 1172
182 Ga0496123_0014503 3300048926 Bacteria 6527
183 Ga0496124_0000359 3300048927 Bacteria 83092
184 Ga0496124_0105886 3300048927 Bacteria 2271
185 Ga0496125_0012254 3300048928 Bacteria 8525
186 Ga0496125_0032741 3300048928 Bacteria 4614
187 Ga0496126_0085846 3300048929 Bacteria 2774
188 Ga0501034_0000139 3300049571 Bacteria 135587
189 Ga0501034_0095703 3300049571 Bacteria 2966
190 Ga0501039_0026075 3300049575 Bacteria 4493
191 Ga0501040_0137679 3300049576 Bacteria 1719
192 Ga0501042_0176913 3300049578 Bacteria 1539
193 Ga0501071_0006639 3300049587 Bacteria 7516
194 Ga0501072_0061183 3300049588 Bacteria 2969
195 Ga0501072_0111863 3300049588 Bacteria 2174
196 Ga0501074_0146903 3300049590 Bacteria 1686
197 Ga0501076_0075921 3300049592 Bacteria 2694
198 Ga0501076_0243308 3300049592 Bacteria 1472
199 Ga0501223_000060 3300049663 Bacteria 35869
200 Ga0501246_000266 3300049676 Bacteria 3577
201 Ga0501225_0000021 3300049705 Bacteria 57397
202 Ga0501079_0085436 3300049741 Bacteria 2442
203 Ga0501081_0030417 3300049743 Bacteria 3655
204 Ga0501081_0357750 3300049743 Bacteria 1077
205 Ga0501083_0289084 3300049744 Bacteria 1066
206 nmdc:mga03n38_189809_c1 3300050490 Bacteria 1058
207 nmdc:mga03n38_827_c1 3300050490 Bacteria 8273
208 nmdc:mga0yw44_170942_c1 3300050492 Bacteria 1427
209 nmdc:mga06z11_12711_c1 3300050494 Bacteria 3670
210 nmdc:mga06z11_136362_c1 3300050494 Bacteria 1383
211 nmdc:mga04h51_57241_c1 3300050495 Bacteria 1326
212 nmdc:mga07m45_168712_c1 3300050496 Bacteria 1272
213 nmdc:mga07m45_214834_c1 3300050496 Bacteria 1119
214 nmdc:mga05p37_190562_c1 3300050507 Bacteria 2490
215 nmdc:mga0qj67_85735_c1 3300050509 Bacteria 2526
216 nmdc:mga06r32_280808_c1 3300050510 Bacteria 1652
217 nmdc:mga06r32_429912_c1 3300050510 Bacteria 1301
218 nmdc:mga06r32_446283_c1 3300050510 Bacteria 1273
219 nmdc:mga08y16_54353_c1 3300050511 Bacteria 4184
220 Ga0500644_0006686 3300053088 Bacteria 2966
221 Ga0500646_0011208 3300053090 Bacteria 2303
222 Ga0500583_0137574 3300053092 Bacteria 1213
223 Ga0500595_005197 3300053119 Bacteria 5709
224 Ga0500559_0188953 3300053136 Bacteria 971
225 Ga0500568_0000312 3300053139 Bacteria 38588
226 Ga0500588_0062148 3300053146 Bacteria 1200
227 Ga0500604_0000009 3300053151 Bacteria 112387
228 Ga0500616_0000119 3300053153 Bacteria 143264
229 Ga0500616_0026039 3300053153 Bacteria 3242
230 Ga0501084_0196194 3300054114 Bacteria 1703
231 Ga0501082_0115260 3300060353 Bacteria 2327
232 Ga0530510_0002960 3300061734 Bacteria 11652
233 2524613844 2524023250 Bacteria 5457705
234 2643950586 2643221588 Bacteria 3692460
235 2903752364 2903748898 Bacteria 9972761
236 2919139460 2919138771 Bacteria 5281312
237 2919709550 2919709256 Bacteria 4318106
238 Ga0316584_0249500
239 Ga0055524_1000221
240 Ga0070658_10080188
241 Ga0068869_100163585
242 Ga0070680_100027280
243 Ga0070660_100101809
244 Ga0070668_100000104
245 Ga0070668_100012062
246 Ga0070668_100018696
247 Ga0070669_100001184
248 Ga0070671_100007531
249 Ga0070667_100034126
250 Ga0070667_100246512
251 Ga0070681_10289636
252 Ga0070679_100506678
253 Ga0070665_100000169
254 Ga0068855_100125452
255 Ga0068859_100038523
256 Ga0068864_100000233
257 Ga0068863_100105476
258 Ga0068863_100256457
259 Ga0068858_100000587
260 Ga0068858_100394753
261 Ga0068860_100089943
262 Ga0068862_100251494
263 Ga0068862_100408170
264 Ga0081455_10008578
265 Ga0075368_10037582
266 Ga0075362_10031437
267 Ga0075367_10000277
268 Ga0075367_10019666
269 Ga0075367_10228830
270 Ga0075428_100058340
271 Ga0075431_100351860
272 Ga0075433_10586486
273 Ga0097620_100038523
274 Ga0075435_100053826
275 Ga0105251_10003202
276 Ga0111539_10472860
277 Ga0111539_10540419
278 Ga0105247_10118169
279 Ga0114129_10029768
280 Ga0105241_10153826
281 Ga0105248_10025207
282 Ga0105248_10308621
283 Ga0105237_10372382
284 Ga0105238_10137006
285 Ga0105249_10052696
286 Ga0105239_10044553
287 Ga0105239_11083057
288 Ga0105246_10121869
289 Ga0105246_10336253
290 Ga0105246_10398498
291 Ga0157378_10085580
292 Ga0163162_10005912
293 Ga0157372_10716984
294 Ga0157375_10145564
295 Ga0163163_10033641
296 Ga0163163_10171831
297 Ga0157380_10227097
298 Ga0182008_10117992
299 Ga0209437_102303
300 Ga0209233_1000182
301 Ga0209565_1000010
302 Ga0209455_1006444
303 Ga0209673_1004262
304 Ga0209675_1030484
305 Ga0209256_1000012
306 Ga0209257_1000466
307 Ga0207713_1001813
308 Ga0207710_10129811
309 Ga0207705_10169174
310 Ga0207681_10001199
311 Ga0207694_10029985
312 Ga0207687_10004556
313 Ga0207644_10000519
314 Ga0207711_10005770
315 Ga0207711_10239399
316 Ga0207679_10248212
317 Ga0207712_10031847
318 Ga0207668_10017846
319 Ga0207658_10037137
320 Ga0207658_10057559
321 Ga0207703_10000409
322 Ga0207703_10004594
323 Ga0207708_10383802
324 Ga0207641_10005539
325 Ga0207641_10093152
326 Ga0207641_10179146
327 Ga0207676_10000150
328 Ga0207675_100154956
329 Ga0207683_10255946
330 Ga0207428_10195997
331 Ga0268264_10015699
332 Ga0268264_10457453
333 Ga0265340_10012510
334 Ga0307508_10007169
335 Ga0316575_10044386
336 Ga0316579_10046923
337 Ga0316576_10015353
338 Ga0316578_10015708
339 Ga0307405_10081598
340 Ga0316577_10048839
341 Ga0307413_10001824
342 Ga0307410_10009198
343 Ga0307410_10252976
344 Ga0307406_10045777
345 Ga0307406_10050416
346 Ga0307412_10000638
347 Ga0307416_100045278
348 Ga0307416_100301747
349 Ga0307414_10016298
350 Ga0307414_10186021
351 Ga0307411_10034435
352 Ga0307411_10299155
353 Ga0307415_100344883
354 Ga0316583_10005656
355 Ga0316585_10017811
356 Ga0316580_10007493
357 Ga0316593_10001547
358 Ga0307510_10000248
359 Ga0316592_1000532
360 Ga0316586_1000846
361 Ga0316588_1001348
362 Ga0316587_1005267
363 Ga0316596_1000370
364 Ga0373941_0033346
365 Ga0316574_0018044
366 Ga0316574_0060544
367 Ga0316574_0306475
368 Ga0373933_0064298
369 Ga0373947_0091002
370 Ga0373937_0056149
371 Ga0373937_0301434
372 Ga0316584_0003615
373 Ga0373925_0136245
374 Ga0316581_0012719
375 Ga0395901_0000247
376 Ga0400483_051905
377 Ga0400483_165238
378 Ga0400483_276729
379 Ga0451841_1394806
380 Ga0495605_0043095
381 Ga0495583_0000087
382 Ga0495632_0001911
383 Ga0495648_0000049
384 Ga0495625_0000223
385 Ga0495657_0084999
386 Ga0495647_0002465
387 Ga0495671_0000042
388 Ga0495673_0000111
389 Ga0496101_0030420
390 Ga0496101_0708671
391 Ga0496102_0000472
392 Ga0496102_0118087
393 Ga0496103_0000318
394 Ga0496103_0099987
395 Ga0496106_0012224
396 Ga0496107_0010478
397 Ga0496107_0356162
398 Ga0496109_0036025
399 Ga0496111_0099749
400 Ga0496112_0019170
401 Ga0496113_0091662
402 Ga0496114_0104572
403 Ga0496114_0402445
404 Ga0496115_0109226
405 Ga0496116_0001661
406 Ga0496116_0036219
407 Ga0496117_0000946
408 Ga0496117_0022756
409 Ga0496117_0036141
410 Ga0496118_0000133
411 Ga0496118_0049609
412 Ga0496118_0085815
413 Ga0496119_0063886
414 Ga0496121_0027519
415 Ga0496121_0034147
416 Ga0496121_0277820
417 Ga0496122_0038191
418 Ga0496122_0199357
419 Ga0496123_0014503
420 Ga0496124_0000359
421 Ga0496124_0105886
422 Ga0496125_0012254
423 Ga0496125_0032741
424 Ga0496126_0085846
425 Ga0501034_0000139
426 Ga0501034_0095703
427 Ga0501039_0026075
428 Ga0501040_0137679
429 Ga0501042_0176913
430 Ga0501071_0006639
431 Ga0501072_0061183
432 Ga0501072_0111863
433 Ga0501074_0146903
434 Ga0501076_0075921
435 Ga0501076_0243308
436 Ga0501223_000060
437 Ga0501246_000266
438 Ga0501225_0000021
439 Ga0501079_0085436
440 Ga0501081_0030417
441 Ga0501081_0357750
442 Ga0501083_0289084
443 nmdc:mga03n38_189809_c1
444 nmdc:mga03n38_827_c1
445 nmdc:mga0yw44_170942_c1
446 nmdc:mga06z11_12711_c1
447 nmdc:mga06z11_136362_c1
448 nmdc:mga04h51_57241_c1
449 nmdc:mga07m45_168712_c1
450 nmdc:mga07m45_214834_c1
451 nmdc:mga05p37_190562_c1
452 nmdc:mga0qj67_85735_c1
453 nmdc:mga06r32_280808_c1
454 nmdc:mga06r32_429912_c1
455 nmdc:mga06r32_446283_c1
456 nmdc:mga08y16_54353_c1
457 Ga0500644_0006686
458 Ga0500646_0011208
459 Ga0500583_0137574
460 Ga0500595_005197
461 Ga0500559_0188953
462 Ga0500568_0000312
463 Ga0500588_0062148
464 Ga0500604_0000009
465 Ga0500616_0000119
466 Ga0500616_0026039
467 Ga0501084_0196194
468 Ga0501082_0115260
469 Ga0530510_0002960
470 2524613844
471 2643950586
472 2903752364
473 2919139460
474 2919709550

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02433

FixO

Cytochrome C oxidase, mono-heme subunit/FixO

32

256

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8snh-assembly1.cif.gz_F cytochrome bc1-cbb3 supercomplex from pseudomonas aeruginosa 0.7067 6 233
5djq-assembly4.cif.gz_L the structure of cbb3 cytochrome oxidase. 0.7017 11 232
8snh-assembly1.cif.gz_F cytochrome bc1-cbb3 supercomplex from pseudomonas aeruginosa 0.7006 6 233
6xkw-assembly1.cif.gz_o r. capsulatus ciii2civ bipartite super-complex (sc-2a) with ccoh/cy 0.6987 11 234
6xkw-assembly1.cif.gz_o r. capsulatus ciii2civ bipartite super-complex (sc-2a) with ccoh/cy 0.6892 11 234
ID Description Score Start End Superfamily
3mk7E02 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7404 45 231 1.10.760.10
3mk7E02 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.7193 45 231 1.10.760.10
2c1dD00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.52 107 229 1.10.760.10
2oz1D00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.4141 41 228 1.10.760.10
2oz1D00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.3751 41 228 1.10.760.10
ID Description Score Start End GO Terms
AF-A0A2N7XTI4-F1-model_v4 Cytochrome-c oxidase, cbb3-type subunit II 0.9791 141 229 GO:0009055
GO:0020037
AF-A0A7X6ELA2-F1-model_v4 deleted 0.979 119 229
AF-A0A7X6ELA2-F1-model_v4 deleted 0.9619 119 229
AF-A0A7Y2TYS7-F1-model_v4 Cytochrome-c oxidase, cbb3-type subunit II 0.9602 119 235 GO:0009055
GO:0020037
AF-A0A2N7XTI4-F1-model_v4 Cytochrome-c oxidase, cbb3-type subunit II 0.9579 141 229 GO:0009055
GO:0020037

Map