F350097

General Info

Members Datasets Scaffolds Average Seq Length
237 155 474 399

Family's Representative Sequence

Representative Sequence 3300026116|Ga0207674_10144499|Ga0207674_101444992
Length 463
Sequence VSSSPTSQAVEVTMPQMGVSVAEGTIVEWRKRVGDWVEADEPIVEISTDKVETEVPSPASGRVSEILVEAGSTVDVGTLLARIDAEARPGVAHADEGSEPEVPSSQFPVPSPGNGHGPPISPVVRRMADEHGVDLEQVEGSGRRGRVTKKDLLAFLGDKPDTRHQTPDTPAAEPALHSESPYREEEPAPAAGHQLSVMRRQIGEHMVRSIQTAAHCTTVVEADMSAIEAARGRLSYLPFVARATIAALREFPMLNATLEGDRLTVHDEVNLGIAVSLGDEGLIVPVVRNAHELSHEGLAARIKDLAERARSKKLTPDEVSGGTFTITNPGAFGALLATPIINQPQVAILDLEAVTKRPVVVGGDSIAIRPMTYLCMSWDHRALDGALAAQFLSAVRRQMRRTNLRTCMGYKGYRRYGLSKDRWEAFNFEEGNRTVPEDERQKYLEMQAKAAISGLPATRELEF

Samples

Sample ID Description Type Environment
1 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
65 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
66 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
67 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
68 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
74 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
75 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
76 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
79 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
108 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
109 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
110 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
111 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
152 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.89
Metatranscriptomes 2.11
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.38
Nodule 0
Rhizoplane 8.44
Rhizosphere 81.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207674_10144499 3300026116 Bacteria 2338
2 Ga0070683_100002156 3300005329 Bacteria 15565
3 Ga0070683_100141737 3300005329 Bacteria 2277
4 Ga0070660_100009403 3300005339 Bacteria 6872
5 Ga0070660_100204708 3300005339 Bacteria 1601
6 Ga0070669_100025648 3300005353 Bacteria 4234
7 Ga0070669_100066251 3300005353 Bacteria 2662
8 Ga0070673_100049203 3300005364 Bacteria 3291
9 Ga0070659_100097615 3300005366 Bacteria 2361
10 Ga0070667_100008644 3300005367 Bacteria 8438
11 Ga0070714_100000151 3300005435 Bacteria 55747
12 Ga0070714_100103132 3300005435 Bacteria 2516
13 Ga0070705_100005209 3300005440 Bacteria 6315
14 Ga0070694_100069371 3300005444 Bacteria 2425
15 Ga0070663_100001950 3300005455 Bacteria 11520
16 Ga0070663_100022359 3300005455 Bacteria 4227
17 Ga0070681_10018446 3300005458 Bacteria 6974
18 Ga0070681_10308219 3300005458 Bacteria 1493
19 Ga0070707_100098977 3300005468 Bacteria 2825
20 Ga0070679_100001667 3300005530 Bacteria 20012
21 Ga0070679_100008215 3300005530 Bacteria 9813
22 Ga0070679_100015923 3300005530 Bacteria 7238
23 Ga0070686_100027024 3300005544 Bacteria 3470
24 Ga0070704_100126968 3300005549 Bacteria 1970
25 Ga0068857_100284383 3300005577 Bacteria 1522
26 Ga0068860_100139147 3300005843 Bacteria 2332
27 Ga0081455_10014893 3300005937 Bacteria 7581
28 Ga0081455_10032489 3300005937 Bacteria 4701
29 Ga0081455_10128814 3300005937 Bacteria 1982
30 Ga0081538_10000225 3300005981 Bacteria 63512
31 Ga0081538_10005201 3300005981 Bacteria 11769
32 Ga0081538_10016526 3300005981 Bacteria 5652
33 Ga0081538_10017263 3300005981 Bacteria 5486
34 Ga0081538_10023350 3300005981 Bacteria 4448
35 Ga0081538_10043298 3300005981 Bacteria 2829
36 Ga0081540_1002958 3300005983 Bacteria 13620
37 Ga0081540_1042219 3300005983 Bacteria 2354
38 Ga0075365_10003814 3300006038 Bacteria 7863
39 Ga0075365_10103345 3300006038 Bacteria 1953
40 Ga0075364_10032172 3300006051 Bacteria 3370
41 Ga0075364_10036863 3300006051 Bacteria 3163
42 Ga0075364_10038413 3300006051 Bacteria 3101
43 Ga0070712_100009337 3300006175 Bacteria 6182
44 Ga0075430_100007094 3300006846 Bacteria 9448
45 Ga0075431_100024764 3300006847 Bacteria 6153
46 Ga0075429_100031121 3300006880 Bacteria 4638
47 Ga0105240_10096378 3300009093 Bacteria 3605
48 Ga0105245_10057592 3300009098 Bacteria 3496
49 Ga0114129_10007330 3300009147 Bacteria 15702
50 Ga0105243_10180992 3300009148 Bacteria 1833
51 Ga0105237_10094301 3300009545 Bacteria 2982
52 Ga0105237_10094593 3300009545 Bacteria 2978
53 Ga0105238_10053679 3300009551 Bacteria 4050
54 Ga0105033_101139 3300009986 Bacteria 2151
55 Ga0105239_10028279 3300010375 Bacteria 6167
56 Ga0105239_10078791 3300010375 Bacteria 3626
57 Ga0105239_10222680 3300010375 Bacteria 2116
58 Ga0157371_10145410 3300013102 Bacteria 1689
59 Ga0157370_10015996 3300013104 Bacteria 7610
60 Ga0157369_10019005 3300013105 Bacteria 7695
61 Ga0157379_10074214 3300014968 Bacteria 3045
62 Ga0157376_10142728 3300014969 Bacteria 2150
63 Ga0157376_10222597 3300014969 Bacteria 1748
64 Ga0206351_10970674 3300020077 Bacteria 1586
65 Ga0224712_10002798 3300022467 Bacteria 4397
66 Ga0224712_10008760 3300022467 Bacteria 3016
67 Ga0224712_10017123 3300022467 Bacteria 2397
68 Ga0207426_1015112 3300025302 Bacteria 2810
69 Ga0207692_10000001 3300025898 Bacteria 558345
70 Ga0207680_10123600 3300025903 Bacteria 1696
71 Ga0207695_10208710 3300025913 Bacteria 1865
72 Ga0207693_10011440 3300025915 Bacteria 7183
73 Ga0207657_10007411 3300025919 Bacteria 11250
74 Ga0207657_10204626 3300025919 Bacteria 1586
75 Ga0207652_10000480 3300025921 Bacteria 40915
76 Ga0207652_10001912 3300025921 Bacteria 18035
77 Ga0207681_10004376 3300025923 Bacteria 8707
78 Ga0207681_10015781 3300025923 Bacteria 4715
79 Ga0207687_10045690 3300025927 Bacteria 3028
80 Ga0207664_10000152 3300025929 Bacteria 55754
81 Ga0207664_10009679 3300025929 Bacteria 6775
82 Ga0207661_10020543 3300025944 Bacteria 4938
83 Ga0207661_10239473 3300025944 Bacteria 1609
84 Ga0207658_10001666 3300025986 Bacteria 16935
85 Ga0207678_10000844 3300026067 Bacteria 28136
86 Ga0207678_10004005 3300026067 Bacteria 13258
87 Ga0207708_10140183 3300026075 Bacteria 1896
88 Ga0207702_10127617 3300026078 Bacteria 2286
89 Ga0268266_10000561 3300028379 Bacteria 51825
90 Ga0268264_10113321 3300028381 Bacteria 2379
91 Ga0265338_10056066 3300028800 Bacteria 3500
92 Ga0265340_10037512 3300031247 Bacteria 2401
93 Ga0265327_10008073 3300031251 Bacteria 7929
94 Ga0265327_10024054 3300031251 Bacteria 3589
95 Ga0307408_100132570 3300031548 Bacteria 1946
96 Ga0316579_10010676 3300031691 Bacteria 3887
97 Ga0316576_10003502 3300031727 Bacteria 9221
98 Ga0316578_10081696 3300031728 Bacteria 1923
99 Ga0307405_10121584 3300031731 Bacteria 1787
100 Ga0316577_10001826 3300031733 Bacteria 10279
101 Ga0307409_100226654 3300031995 Bacteria 1691
102 Ga0307414_10108692 3300032004 Bacteria 2105
103 Ga0307411_10019064 3300032005 Bacteria 3953
104 Ga0307415_100009532 3300032126 Bacteria 5449
105 Ga0316583_10000131 3300032133 Bacteria 17578
106 Ga0316585_10000138 3300032137 Bacteria 14099
107 Ga0316580_10000069 3300032139 Bacteria 17608
108 Ga0316592_1003719 3300033524 Bacteria 2779
109 Ga0316574_0015078 3300035398 Bacteria 4479
110 Ga0316582_0028904 3300036647 Bacteria 3362
111 Ga0316584_0000300 3300036712 Bacteria 25308
112 Ga0316584_0004287 3300036712 Bacteria 9427
113 Ga0373925_0059680 3300037068 Bacteria 2862
114 Ga0395898_0068275 3300037466 Bacteria 3440
115 Ga0395898_0157887 3300037466 Bacteria 2169
116 Ga0395905_0117536 3300037471 Bacteria 2499
117 Ga0316581_0008358 3300037588 Bacteria 2814
118 Ga0395901_0069077 3300038443 Bacteria 3679
119 Ga0395901_0313742 3300038443 Bacteria 1623
120 Ga0395901_0406701 3300038443 Bacteria 1398
121 Ga0436362_0186548 3300039453 Bacteria 4841
122 Ga0466969_0036757 3300044656 Bacteria 2472
123 Ga0466963_0009119 3300044694 Bacteria 5965
124 Ga0466963_0052136 3300044694 Bacteria 2714
125 Ga0466964_0063560 3300044706 Bacteria 1542
126 Ga0466968_0089874 3300044735 Bacteria 1359
127 Ga0466957_0001522 3300044842 Bacteria 12191
128 Ga0466959_0062046 3300045049 Bacteria 2717
129 Ga0451576_0137723 3300045051 Bacteria 2546
130 Ga0466958_0063040 3300045836 Bacteria 2260
131 Ga0466967_0005066 3300045976 Bacteria 9039
132 Ga0466967_0052450 3300045976 Bacteria 3579
133 Ga0466967_0063609 3300045976 Bacteria 3279
134 Ga0466967_0078709 3300045976 Bacteria 2970
135 Ga0466967_0151991 3300045976 Bacteria 2165
136 Ga0466967_0168822 3300045976 Bacteria 2057
137 Ga0466967_0185128 3300045976 Bacteria 1966
138 Ga0496100_0146062 3300048903 Bacteria 1682
139 Ga0496101_0013615 3300048904 Bacteria 5455
140 Ga0496102_0007999 3300048905 Bacteria 9035
141 Ga0496103_0014979 3300048906 Bacteria 4609
142 Ga0496103_0023714 3300048906 Bacteria 3701
143 Ga0496103_0046798 3300048906 Bacteria 2671
144 Ga0496104_0149757 3300048907 Bacteria 2240
145 Ga0496104_0161238 3300048907 Bacteria 2151
146 Ga0496104_0187029 3300048907 Bacteria 1982
147 Ga0496105_0032928 3300048908 Bacteria 4254
148 Ga0496107_0025770 3300048910 Bacteria 4165
149 Ga0496109_0110955 3300048912 Bacteria 2550
150 Ga0496110_0046609 3300048913 Bacteria 3792
151 Ga0496110_0052946 3300048913 Bacteria 3567
152 Ga0496112_0087147 3300048915 Bacteria 3089
153 Ga0496113_0032319 3300048916 Bacteria 3804
154 Ga0496113_0108863 3300048916 Bacteria 2154
155 Ga0496113_0145075 3300048916 Bacteria 1869
156 Ga0496115_0073377 3300048918 Bacteria 2777
157 Ga0496115_0101340 3300048918 Bacteria 2361
158 Ga0496116_0000014 3300048919 Bacteria 569049
159 Ga0496117_0005594 3300048920 Bacteria 13127
160 Ga0496118_0000090 3300048921 Bacteria 175645
161 Ga0496118_0077001 3300048921 Bacteria 2368
162 Ga0496119_0039634 3300048922 Bacteria 3025
163 Ga0496119_0064338 3300048922 Bacteria 2178
164 Ga0496121_0009800 3300048924 Bacteria 10943
165 Ga0496121_0017667 3300048924 Bacteria 7261
166 Ga0496121_0092632 3300048924 Bacteria 2355
167 Ga0496124_0009019 3300048927 Bacteria 10319
168 Ga0496124_0108872 3300048927 Bacteria 2234
169 Ga0496125_0028084 3300048928 Bacteria 5088
170 Ga0496126_0033678 3300048929 Bacteria 4818
171 Ga0496126_0063556 3300048929 Bacteria 3309
172 Ga0496126_0106375 3300048929 Bacteria 2448
173 Ga0501031_0165349 3300049568 Bacteria 1446
174 Ga0501031_0169365 3300049568 Bacteria 1427
175 Ga0501032_0002487 3300049569 Bacteria 14390
176 Ga0501033_0000317 3300049570 Bacteria 45727
177 Ga0501034_0055394 3300049571 Bacteria 3990
178 Ga0501034_0069884 3300049571 Bacteria 3522
179 Ga0501034_0204247 3300049571 Bacteria 1932
180 Ga0501036_0017020 3300049572 Bacteria 6075
181 Ga0501036_0190425 3300049572 Bacteria 1726
182 Ga0501037_0013334 3300049573 Bacteria 6057
183 Ga0501038_0000334 3300049574 Bacteria 40648
184 Ga0501039_0046091 3300049575 Bacteria 3368
185 Ga0501041_0013365 3300049577 Bacteria 4866
186 Ga0501042_0089588 3300049578 Bacteria 2207
187 Ga0501042_0214908 3300049578 Bacteria 1387
188 Ga0501043_0015154 3300049579 Bacteria 6034
189 Ga0501046_0000500 3300049580 Bacteria 39143
190 Ga0501046_0223225 3300049580 Bacteria 1394
191 Ga0501047_0022608 3300049581 Bacteria 6037
192 Ga0501047_0434257 3300049581 Bacteria 1144
193 Ga0501048_0013664 3300049582 Bacteria 6023
194 Ga0501067_0118399 3300049583 Bacteria 1473
195 Ga0501068_0034555 3300049584 Bacteria 3014
196 Ga0501069_0010571 3300049585 Bacteria 4889
197 Ga0501069_0017805 3300049585 Bacteria 3830
198 Ga0501070_0000790 3300049586 Bacteria 28768
199 Ga0501070_0058782 3300049586 Bacteria 3187
200 Ga0501070_0098486 3300049586 Bacteria 2418
201 Ga0501071_0018868 3300049587 Bacteria 4783
202 Ga0501071_0049556 3300049587 Bacteria 3024
203 Ga0501072_0020556 3300049588 Bacteria 5117
204 Ga0501072_0028005 3300049588 Bacteria 4398
205 Ga0501072_0029620 3300049588 Bacteria 4277
206 Ga0501073_0015095 3300049589 Bacteria 5604
207 Ga0501074_0015673 3300049590 Bacteria 5509
208 Ga0501074_0031212 3300049590 Bacteria 3860
209 Ga0501076_0087468 3300049592 Bacteria 2505
210 Ga0501077_0020114 3300049593 Bacteria 4225
211 Ga0501079_0015234 3300049741 Bacteria 5865
212 Ga0501079_0098664 3300049741 Bacteria 2264
213 Ga0501080_0048058 3300049742 Bacteria 3972
214 Ga0501083_0012170 3300049744 Bacteria 6023
215 Ga0501083_0090235 3300049744 Bacteria 2024
216 Ga0501035_0000829 3300049822 Bacteria 32997
217 Ga0501035_0189190 3300049822 Bacteria 1770
218 Ga0501044_0005871 3300049823 Bacteria 13601
219 Ga0501044_0006288 3300049823 Bacteria 13126
220 Ga0501044_0219532 3300049823 Bacteria 1852
221 Ga0501045_0021747 3300049824 Bacteria 4592
222 Ga0501045_0021760 3300049824 Bacteria 4590
223 Ga0501045_0032326 3300049824 Bacteria 3792
224 nmdc:mga00v17_79107_c1 3300050491 Bacteria 2050
225 nmdc:mga0yw44_9011_c1 3300050492 Bacteria 5014
226 nmdc:mga05p37_1194_c2 3300050507 Bacteria 22571
227 nmdc:mga09592_46665_c1 3300050508 Bacteria 3649
228 nmdc:mga09592_6470_c1 3300050508 Bacteria 9540
229 nmdc:mga0qj67_4907_c1 3300050509 Bacteria 9728
230 nmdc:mga06r32_119133_c1 3300050510 Bacteria 2603
231 Ga0590071_000395 3300059421 Bacteria 12856
232 Ga0590077_004243 3300059426 Bacteria 2954
233 Ga0501082_0025506 3300060353 Bacteria 5093
234 Ga0501082_0243669 3300060353 Bacteria 1564
235 Ga0466962_0001611 3300061719 Bacteria 10575
236 Ga0530510_0000650 3300061734 Bacteria 22458
237 Ga0530510_0065852 3300061734 Bacteria 2626
238 Ga0207674_10144499
239 Ga0070683_100002156
240 Ga0070683_100141737
241 Ga0070660_100009403
242 Ga0070660_100204708
243 Ga0070669_100025648
244 Ga0070669_100066251
245 Ga0070673_100049203
246 Ga0070659_100097615
247 Ga0070667_100008644
248 Ga0070714_100000151
249 Ga0070714_100103132
250 Ga0070705_100005209
251 Ga0070694_100069371
252 Ga0070663_100001950
253 Ga0070663_100022359
254 Ga0070681_10018446
255 Ga0070681_10308219
256 Ga0070707_100098977
257 Ga0070679_100001667
258 Ga0070679_100008215
259 Ga0070679_100015923
260 Ga0070686_100027024
261 Ga0070704_100126968
262 Ga0068857_100284383
263 Ga0068860_100139147
264 Ga0081455_10014893
265 Ga0081455_10032489
266 Ga0081455_10128814
267 Ga0081538_10000225
268 Ga0081538_10005201
269 Ga0081538_10016526
270 Ga0081538_10017263
271 Ga0081538_10023350
272 Ga0081538_10043298
273 Ga0081540_1002958
274 Ga0081540_1042219
275 Ga0075365_10003814
276 Ga0075365_10103345
277 Ga0075364_10032172
278 Ga0075364_10036863
279 Ga0075364_10038413
280 Ga0070712_100009337
281 Ga0075430_100007094
282 Ga0075431_100024764
283 Ga0075429_100031121
284 Ga0105240_10096378
285 Ga0105245_10057592
286 Ga0114129_10007330
287 Ga0105243_10180992
288 Ga0105237_10094301
289 Ga0105237_10094593
290 Ga0105238_10053679
291 Ga0105033_101139
292 Ga0105239_10028279
293 Ga0105239_10078791
294 Ga0105239_10222680
295 Ga0157371_10145410
296 Ga0157370_10015996
297 Ga0157369_10019005
298 Ga0157379_10074214
299 Ga0157376_10142728
300 Ga0157376_10222597
301 Ga0206351_10970674
302 Ga0224712_10002798
303 Ga0224712_10008760
304 Ga0224712_10017123
305 Ga0207426_1015112
306 Ga0207692_10000001
307 Ga0207680_10123600
308 Ga0207695_10208710
309 Ga0207693_10011440
310 Ga0207657_10007411
311 Ga0207657_10204626
312 Ga0207652_10000480
313 Ga0207652_10001912
314 Ga0207681_10004376
315 Ga0207681_10015781
316 Ga0207687_10045690
317 Ga0207664_10000152
318 Ga0207664_10009679
319 Ga0207661_10020543
320 Ga0207661_10239473
321 Ga0207658_10001666
322 Ga0207678_10000844
323 Ga0207678_10004005
324 Ga0207708_10140183
325 Ga0207702_10127617
326 Ga0268266_10000561
327 Ga0268264_10113321
328 Ga0265338_10056066
329 Ga0265340_10037512
330 Ga0265327_10008073
331 Ga0265327_10024054
332 Ga0307408_100132570
333 Ga0316579_10010676
334 Ga0316576_10003502
335 Ga0316578_10081696
336 Ga0307405_10121584
337 Ga0316577_10001826
338 Ga0307409_100226654
339 Ga0307414_10108692
340 Ga0307411_10019064
341 Ga0307415_100009532
342 Ga0316583_10000131
343 Ga0316585_10000138
344 Ga0316580_10000069
345 Ga0316592_1003719
346 Ga0316574_0015078
347 Ga0316582_0028904
348 Ga0316584_0000300
349 Ga0316584_0004287
350 Ga0373925_0059680
351 Ga0395898_0068275
352 Ga0395898_0157887
353 Ga0395905_0117536
354 Ga0316581_0008358
355 Ga0395901_0069077
356 Ga0395901_0313742
357 Ga0395901_0406701
358 Ga0436362_0186548
359 Ga0466969_0036757
360 Ga0466963_0009119
361 Ga0466963_0052136
362 Ga0466964_0063560
363 Ga0466968_0089874
364 Ga0466957_0001522
365 Ga0466959_0062046
366 Ga0451576_0137723
367 Ga0466958_0063040
368 Ga0466967_0005066
369 Ga0466967_0052450
370 Ga0466967_0063609
371 Ga0466967_0078709
372 Ga0466967_0151991
373 Ga0466967_0168822
374 Ga0466967_0185128
375 Ga0496100_0146062
376 Ga0496101_0013615
377 Ga0496102_0007999
378 Ga0496103_0014979
379 Ga0496103_0023714
380 Ga0496103_0046798
381 Ga0496104_0149757
382 Ga0496104_0161238
383 Ga0496104_0187029
384 Ga0496105_0032928
385 Ga0496107_0025770
386 Ga0496109_0110955
387 Ga0496110_0046609
388 Ga0496110_0052946
389 Ga0496112_0087147
390 Ga0496113_0032319
391 Ga0496113_0108863
392 Ga0496113_0145075
393 Ga0496115_0073377
394 Ga0496115_0101340
395 Ga0496116_0000014
396 Ga0496117_0005594
397 Ga0496118_0000090
398 Ga0496118_0077001
399 Ga0496119_0039634
400 Ga0496119_0064338
401 Ga0496121_0009800
402 Ga0496121_0017667
403 Ga0496121_0092632
404 Ga0496124_0009019
405 Ga0496124_0108872
406 Ga0496125_0028084
407 Ga0496126_0033678
408 Ga0496126_0063556
409 Ga0496126_0106375
410 Ga0501031_0165349
411 Ga0501031_0169365
412 Ga0501032_0002487
413 Ga0501033_0000317
414 Ga0501034_0055394
415 Ga0501034_0069884
416 Ga0501034_0204247
417 Ga0501036_0017020
418 Ga0501036_0190425
419 Ga0501037_0013334
420 Ga0501038_0000334
421 Ga0501039_0046091
422 Ga0501041_0013365
423 Ga0501042_0089588
424 Ga0501042_0214908
425 Ga0501043_0015154
426 Ga0501046_0000500
427 Ga0501046_0223225
428 Ga0501047_0022608
429 Ga0501047_0434257
430 Ga0501048_0013664
431 Ga0501067_0118399
432 Ga0501068_0034555
433 Ga0501069_0010571
434 Ga0501069_0017805
435 Ga0501070_0000790
436 Ga0501070_0058782
437 Ga0501070_0098486
438 Ga0501071_0018868
439 Ga0501071_0049556
440 Ga0501072_0020556
441 Ga0501072_0028005
442 Ga0501072_0029620
443 Ga0501073_0015095
444 Ga0501074_0015673
445 Ga0501074_0031212
446 Ga0501076_0087468
447 Ga0501077_0020114
448 Ga0501079_0015234
449 Ga0501079_0098664
450 Ga0501080_0048058
451 Ga0501083_0012170
452 Ga0501083_0090235
453 Ga0501035_0000829
454 Ga0501035_0189190
455 Ga0501044_0005871
456 Ga0501044_0006288
457 Ga0501044_0219532
458 Ga0501045_0021747
459 Ga0501045_0021760
460 Ga0501045_0032326
461 nmdc:mga00v17_79107_c1
462 nmdc:mga0yw44_9011_c1
463 nmdc:mga05p37_1194_c2
464 nmdc:mga09592_46665_c1
465 nmdc:mga09592_6470_c1
466 nmdc:mga0qj67_4907_c1
467 nmdc:mga06r32_119133_c1
468 Ga0590071_000395
469 Ga0590077_004243
470 Ga0501082_0025506
471 Ga0501082_0243669
472 Ga0466962_0001611
473 Ga0530510_0000650
474 Ga0530510_0065852

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

10

83

0.98

PF00198

2-oxoacid_dh

2-oxoacid dehydrogenases acyltransferase (catalytic domain)

188

406

0.95

PF02817

E3_binding

e3 binding domain

118

153

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rnm-assembly1.cif.gz_E the crystal structure of the subunit binding of human dihydrolipoamide transacylase (e2b) bound to human dihydrolipoamide dehydrogenase (e3) 0.9679 108 144
1w4h-assembly1.cif.gz_A peripheral-subunit from mesophilic, thermophilic and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions 0.9604 108 144
5gu9-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant 0.9575 9 71
1y8p-assembly1.cif.gz_B crystal structure of the pdk3-l2 complex 0.9573 1 71
1y8n-assembly1.cif.gz_B-2 crystal structure of the pdk3-l2 complex 0.9555 1 70
ID Description Score Start End Superfamily
af_P9WIS7_123_196_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9947 1 71 2.40.50.100
af_B6TJY4_106_181_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9831 2 71 2.40.50.100
af_A4I3X3_25_102_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9728 2 71 2.40.50.100
af_Q2G2A4_2_90_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.972 1 72 2.40.50.100
3rnmE00 Few Secondary Structures;Irregular;Dihydrolipoamide Transferase;E3-binding domain 0.968 108 144 4.10.320.10
ID Description Score Start End GO Terms
AF-A0A3G9M7X5-F1-model_v4 deleted 0.9922 1 68
AF-A0A6J4TNW2-F1-model_v4 Lipoyl-binding domain-containing protein 0.9921 1 71 GO:0006086
GO:0045254
AF-A0A1F4CRZ5-F1-model_v4 Lipoyl-binding domain-containing protein 0.9866 1 72 GO:0005737
GO:0016407
GO:0031405
AF-X1QLC4-F1-model_v4 Lipoyl-binding domain-containing protein 0.9852 1 69 GO:0006086
GO:0045254
AF-A0A7C2YCB7-F1-model_v4 Biotin attachment protein 0.9802 1 70 GO:0005737
GO:0016407
GO:0031405

Map