F349553

General Info

Members Datasets Scaffolds Average Seq Length
236 201 472 293

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2751185782|2753266395
Length 325
Sequence GFIGLGVMGAPMADNLVKAGFDVVGHTRRPDGADRLVAAGGRRAGSVAEAARGADAVITMLPDSPDVEAVVLGADGVLTHCDPGTLIIDMSTVRPQTARALAAAALDRGLESLDAPVSGGEQGAIDAVLSIMVGGTAEAFARARPIFEALGTTIVHVGPAGAGQLVKAANQLVVAGTIELVAEAIVLMEASGVDPALGLEVLGGGLAGSTVLARKGTAMRERRFKPGFRVDLHHKDLGIVLDAARTAAVTLPAGELVAQLMDAVRRSGNGHLDHGVLIRGVEHLSGRDKTAGGSAAAGGSATAGGGAAAGREDASGRVSASGWER

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300012508 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510 Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
100 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
104 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
111 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
112 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
117 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
118 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
124 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
125 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
127 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
128 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
131 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
132 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
133 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
134 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
135 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
136 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
139 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
140 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
141 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
142 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
143 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
146 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
147 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
148 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
149 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
150 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
151 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
152 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
153 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
154 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
155 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
156 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
157 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
158 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
159 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
160 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
161 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
162 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
163 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
164 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
165 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
173 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
174 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
180 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
181 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
184 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
185 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
189 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
190 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
191 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
192 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
193 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
194 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
195 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
196 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
197 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
198 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
199 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
200 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
201 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.37
Metatranscriptomes 1.69
Isolates 5.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.08
Nodule 0
Rhizoplane 2.97
Rhizosphere 82.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10040602 3300003316 Bacteria 1658
2 Ga0055540_1001512 3300003792 Bacteria 13781
3 Ga0055531_10002172 3300003794 Bacteria 13398
4 Ga0070658_10048350 3300005327 Bacteria 3444
5 Ga0070676_10013141 3300005328 Bacteria 4536
6 Ga0068869_100052881 3300005334 Bacteria 2951
7 Ga0070680_100001314 3300005336 Bacteria 18009
8 Ga0068868_100059435 3300005338 Bacteria 3023
9 Ga0070661_100019476 3300005344 Bacteria 4838
10 Ga0070668_100006848 3300005347 Bacteria 8450
11 Ga0070668_100015726 3300005347 Bacteria 5660
12 Ga0070668_100068468 3300005347 Bacteria 2759
13 Ga0070674_100012044 3300005356 Bacteria 5297
14 Ga0070659_100014926 3300005366 Bacteria 5810
15 Ga0070667_100025052 3300005367 Bacteria 4959
16 Ga0070709_10000838 3300005434 Bacteria 17209
17 Ga0070710_10010143 3300005437 Bacteria 4623
18 Ga0070705_100017135 3300005440 Bacteria 3777
19 Ga0070694_100016848 3300005444 Bacteria 4608
20 Ga0070678_100009355 3300005456 Bacteria 5930
21 Ga0070662_100062589 3300005457 Bacteria 2719
22 Ga0068867_100005749 3300005459 Bacteria 8799
23 Ga0070707_100002640 3300005468 Bacteria 17057
24 Ga0070699_100077184 3300005518 Bacteria 2899
25 Ga0070699_100393663 3300005518 Bacteria 1252
26 Ga0070697_100020917 3300005536 Bacteria 5180
27 Ga0068853_100000341 3300005539 Bacteria 32498
28 Ga0068853_100026048 3300005539 Bacteria 4909
29 Ga0070665_100087675 3300005548 Bacteria 3118
30 Ga0070704_100517227 3300005549 Bacteria 1038
31 Ga0068854_100015876 3300005578 Bacteria 5004
32 Ga0068852_100015197 3300005616 Bacteria 5959
33 Ga0068852_100121413 3300005616 Bacteria 2393
34 Ga0068859_100210645 3300005617 Bacteria 2030
35 Ga0068864_100409927 3300005618 Bacteria 1289
36 Ga0068866_10002605 3300005718 Bacteria 7450
37 Ga0068861_100041838 3300005719 Bacteria 3433
38 Ga0068861_100339503 3300005719 Bacteria 1314
39 Ga0068863_100075253 3300005841 Bacteria 3195
40 Ga0068858_100005940 3300005842 Bacteria 11923
41 Ga0068860_100029135 3300005843 Bacteria 5311
42 Ga0068860_100030358 3300005843 Bacteria 5198
43 Ga0068862_100028471 3300005844 Bacteria 4706
44 Ga0081539_10020217 3300005985 Bacteria 4514
45 Ga0081539_10050965 3300005985 Bacteria 2337
46 Ga0075368_10057617 3300006042 Bacteria 1551
47 Ga0070715_10030457 3300006163 Bacteria 2182
48 Ga0070716_100056463 3300006173 Bacteria 2251
49 Ga0070712_100020870 3300006175 Bacteria 4292
50 Ga0075367_10063798 3300006178 Bacteria 2203
51 Ga0097621_100103699 3300006237 Bacteria 2396
52 Ga0075431_100240234 3300006847 Bacteria 1843
53 Ga0075434_100059253 3300006871 Bacteria 3806
54 Ga0075436_100101030 3300006914 Bacteria 2008
55 Ga0097620_100210645 3300006931 Bacteria 2030
56 Ga0105240_10218208 3300009093 Bacteria 2224
57 Ga0105245_10026316 3300009098 Bacteria 5120
58 Ga0105247_10128939 3300009101 Bacteria 1647
59 Ga0114129_10160002 3300009147 Bacteria 3077
60 Ga0114129_10406223 3300009147 Bacteria 1794
61 Ga0105243_10017993 3300009148 Bacteria 5346
62 Ga0105242_10004103 3300009176 Bacteria 11327
63 Ga0105242_10008923 3300009176 Bacteria 7694
64 Ga0105248_10000015 3300009177 Bacteria 322959
65 Ga0105238_10228247 3300009551 Bacteria 1839
66 Ga0105249_10059352 3300009553 Bacteria 3508
67 Ga0157315_1002766 3300012508 Bacteria 1126
68 Ga0157378_10010123 3300013297 Bacteria 8223
69 Ga0163162_10109290 3300013306 Bacteria 2862
70 Ga0157372_10015515 3300013307 Bacteria 8167
71 Ga0157375_10011371 3300013308 Bacteria 7857
72 Ga0157375_10501612 3300013308 Bacteria 1378
73 Ga0157380_10029267 3300014326 Bacteria 4209
74 Ga0163161_10031340 3300017792 Bacteria 3787
75 Ga0209051_1000411 3300025303 Bacteria 59137
76 Ga0209051_1000587 3300025303 Bacteria 43099
77 Ga0209257_1000137 3300025304 Bacteria 204210
78 Ga0207710_10111179 3300025900 Bacteria 1301
79 Ga0207688_10001794 3300025901 Bacteria 11404
80 Ga0207685_10024062 3300025905 Bacteria 2082
81 Ga0207705_10045685 3300025909 Bacteria 3147
82 Ga0207695_10080368 3300025913 Bacteria 3301
83 Ga0207693_10035049 3300025915 Bacteria 3958
84 Ga0207663_10048756 3300025916 Bacteria 2623
85 Ga0207652_10557026 3300025921 Bacteria 1030
86 Ga0207646_10000636 3300025922 Bacteria 45698
87 Ga0207687_10014286 3300025927 Bacteria 5196
88 Ga0207706_10049105 3300025933 Bacteria 3730
89 Ga0207686_10006087 3300025934 Bacteria 6480
90 Ga0207709_10023171 3300025935 Bacteria 3531
91 Ga0207669_10007840 3300025937 Bacteria 4972
92 Ga0207665_10083784 3300025939 Bacteria 2200
93 Ga0207711_10000003 3300025941 Bacteria 1042791
94 Ga0207711_10000005 3300025941 Bacteria 822972
95 Ga0207711_10000009 3300025941 Bacteria 580864
96 Ga0207689_10064230 3300025942 Bacteria 3020
97 Ga0207712_10013949 3300025961 Bacteria 5156
98 Ga0207668_10041186 3300025972 Bacteria 3121
99 Ga0207668_10046107 3300025972 Bacteria 2976
100 Ga0207640_10090804 3300025981 Bacteria 2114
101 Ga0207658_10026817 3300025986 Bacteria 4044
102 Ga0207677_10035732 3300026023 Bacteria 3230
103 Ga0207677_10047453 3300026023 Bacteria 2884
104 Ga0207703_10030905 3300026035 Bacteria 4234
105 Ga0207639_10065873 3300026041 Bacteria 2813
106 Ga0207639_10236094 3300026041 Bacteria 1587
107 Ga0207678_10015590 3300026067 Bacteria 6682
108 Ga0207678_10229060 3300026067 Bacteria 1591
109 Ga0207641_10042590 3300026088 Bacteria 3810
110 Ga0207648_10008485 3300026089 Bacteria 9942
111 Ga0207675_100034945 3300026118 Bacteria 4687
112 Ga0207683_10009807 3300026121 Bacteria 8168
113 Ga0207698_10029065 3300026142 Bacteria 3953
114 Ga0268266_10075045 3300028379 Bacteria 2937
115 Ga0268265_10042859 3300028380 Bacteria 3360
116 Ga0268265_10137713 3300028380 Bacteria 2039
117 Ga0268264_10022905 3300028381 Bacteria 5097
118 Ga0268264_10095280 3300028381 Bacteria 2575
119 Ga0265334_10052568 3300028573 Bacteria 1558
120 Ga0265318_10000025 3300028577 Bacteria 159237
121 Ga0307515_10117290 3300028794 Bacteria 3048
122 Ga0265338_10000869 3300028800 Bacteria 51220
123 Ga0265332_10013504 3300031238 Bacteria 3620
124 Ga0265325_10000112 3300031241 Bacteria 55792
125 Ga0265339_10001618 3300031249 Bacteria 16654
126 Ga0265331_10000054 3300031250 Bacteria 180181
127 Ga0265331_10003224 3300031250 Bacteria 10628
128 Ga0307513_10010125 3300031456 Bacteria 11867
129 Ga0307513_10091796 3300031456 Bacteria 3093
130 Ga0307509_10013352 3300031507 Bacteria 9733
131 Ga0307408_100030063 3300031548 Bacteria 3770
132 Ga0265313_10001297 3300031595 Bacteria 23643
133 Ga0307508_10078892 3300031616 Bacteria 2873
134 Ga0316579_10006025 3300031691 Bacteria 4923
135 Ga0316579_10102745 3300031691 Bacteria 1369
136 Ga0265314_10059382 3300031711 Bacteria 2616
137 Ga0265342_10010281 3300031712 Bacteria 6511
138 Ga0316576_10084662 3300031727 Bacteria 2356
139 Ga0316576_10172856 3300031727 Bacteria 1630
140 Ga0316578_10063312 3300031728 Bacteria 2181
141 Ga0307516_10147827 3300031730 Bacteria 2114
142 Ga0316577_10012018 3300031733 Bacteria 4707
143 Ga0307409_100062410 3300031995 Bacteria 2917
144 Ga0307416_100180871 3300032002 Bacteria 1976
145 Ga0307416_100245658 3300032002 Bacteria 1738
146 Ga0307414_10138403 3300032004 Bacteria 1902
147 Ga0307414_10502817 3300032004 Bacteria 1073
148 Ga0307415_100039651 3300032126 Bacteria 3115
149 Ga0307415_100511443 3300032126 Bacteria 1052
150 Ga0316583_10000311 3300032133 Bacteria 13702
151 Ga0316580_10001874 3300032139 Bacteria 5644
152 Ga0316593_10014401 3300032168 Bacteria 2357
153 Ga0316593_10022987 3300032168 Bacteria 1964
154 Ga0307507_10092880 3300033179 Bacteria 2573
155 Ga0307510_10110383 3300033180 Bacteria 2495
156 Ga0316592_1003314 3300033524 Bacteria 2889
157 Ga0316596_1012468 3300033541 Bacteria 2090
158 Ga0373950_0008060 3300034818 Bacteria 1648
159 Ga0373951_0000164 3300035091 Bacteria 24259
160 Ga0373952_0000635 3300035092 Bacteria 6243
161 Ga0373945_0026852 3300035116 Bacteria 2008
162 Ga0373942_0000250 3300035207 Bacteria 14276
163 Ga0373962_0074834 3300035242 Bacteria 1018
164 Ga0316574_0014096 3300035398 Bacteria 4611
165 Ga0373937_0072761 3300036401 Bacteria 3171
166 Ga0316582_0051548 3300036647 Bacteria 2611
167 Ga0395899_0101920 3300037312 Bacteria 2071
168 Ga0395900_0032629 3300037418 Bacteria 5356
169 Ga0395900_0152622 3300037418 Bacteria 2359
170 Ga0395898_0206530 3300037466 Bacteria 1874
171 Ga0395905_0317594 3300037471 Bacteria 1447
172 Ga0436364_0716801 3300037853 Bacteria 4139
173 Ga0395901_0046096 3300038443 Bacteria 4526
174 Ga0395901_0628222 3300038443 Bacteria 1080
175 Ga0400487_64718 3300039110 Bacteria 15044
176 Ga0436363_0185021 3300039450 Bacteria 1174
177 Ga0451797_1454723 3300041453 Bacteria 2860
178 Ga0451843_0777766 3300041509 Bacteria 1511
179 Ga0439442_023489 3300042002 Bacteria 1281
180 Ga0439448_0000482 3300042005 Bacteria 9205
181 Ga0439450_000160 3300042008 Bacteria 7547
182 Ga0439455_0002211 3300042012 Bacteria 3484
183 Ga0439463_000248 3300042016 Bacteria 14916
184 Ga0450900_000086 3300042136 Bacteria 4880
185 Ga0450904_004415 3300042139 Bacteria 1461
186 Ga0439434_0000342 3300042435 Bacteria 13247
187 Ga0439464_0000173 3300042439 Bacteria 10964
188 Ga0439460_0000404 3300042461 Bacteria 9183
189 Ga0450916_000111 3300042530 Bacteria 5421
190 Ga0439440_0000183 3300042993 Bacteria 9614
191 Ga0466961_0144042 3300044693 Bacteria 1491
192 Ga0453684_0001181 3300044712 Bacteria 80955
193 Ga0466957_0053482 3300044842 Bacteria 2462
194 Ga0451576_0027009 3300045051 Bacteria 6169
195 Ga0451576_0071826 3300045051 Bacteria 3602
196 Ga0495586_0153621 3300046535 Bacteria 1296
197 Ga0496102_0038527 3300048905 Bacteria 4314
198 Ga0496106_0309464 3300048909 Bacteria 1267
199 Ga0496107_0034107 3300048910 Bacteria 3644
200 Ga0496108_0000294 3300048911 Bacteria 42903
201 Ga0496114_0075700 3300048917 Bacteria 2835
202 Ga0496115_0035731 3300048918 Bacteria 3933
203 Ga0496116_0000107 3300048919 Bacteria 188067
204 Ga0496119_0080059 3300048922 Bacteria 1885
205 Ga0496120_0002910 3300048923 Bacteria 16351
206 Ga0496121_0001160 3300048924 Bacteria 46200
207 Ga0496126_0061137 3300048929 Bacteria 3385
208 Ga0501067_0175473 3300049583 Bacteria 1193
209 Ga0501070_0097492 3300049586 Bacteria 2432
210 nmdc:mga0yw44_2366_c1 3300050492 Bacteria 8005
211 nmdc:mga06z11_34704_c1 3300050494 Bacteria 2478
212 nmdc:mga05p37_330955_c1 3300050507 Bacteria 1799
213 nmdc:mga05p37_516200_c1 3300050507 Bacteria 1368
214 nmdc:mga0n895_121316_c1 3300050512 Bacteria 2635
215 nmdc:mga0n895_53972_c1 3300050512 Bacteria 3951
216 nmdc:mga0n895_734985_c1 3300050512 Bacteria 981
217 nmdc:mga0a205_303077_c1 3300050515 Bacteria 1470
218 Ga0500644_0002025 3300053088 Bacteria 5158
219 Ga0500562_014207 3300053108 Bacteria 2039
220 Ga0500616_0052822 3300053153 Bacteria 2135
221 Ga0501084_0000324 3300054114 Bacteria 36445
222 Ga0501082_0108439 3300060353 Bacteria 2403
223 2753266395 2751185782 Bacteria 11227053
224 2791909813 2791354901 Bacteria 8322202
225 2816424355 2816332119 Bacteria 8120218
226 2837185958 2837183177 Bacteria 4637169
227 2842890016 2842888712 Bacteria 4279094
228 2866615185 2866612099 Bacteria 7543886
229 2868091292 2868088558 Bacteria 7609351
230 2868094622 2868088558 Bacteria 7609351
231 2891637841 2891633521 Bacteria 4602265
232 2919054203 2919051321 Bacteria 4210889
233 2919445239 2919443155 Bacteria 4072969
234 8004024362 8004021418 Bacteria 4313954
235 8004028048 8004025490 Bacteria 4327753
236 8008582010 8008574985 Bacteria 7815457
237 rootH1_10040602
238 Ga0055540_1001512
239 Ga0055531_10002172
240 Ga0070658_10048350
241 Ga0070676_10013141
242 Ga0068869_100052881
243 Ga0070680_100001314
244 Ga0068868_100059435
245 Ga0070661_100019476
246 Ga0070668_100006848
247 Ga0070668_100015726
248 Ga0070668_100068468
249 Ga0070674_100012044
250 Ga0070659_100014926
251 Ga0070667_100025052
252 Ga0070709_10000838
253 Ga0070710_10010143
254 Ga0070705_100017135
255 Ga0070694_100016848
256 Ga0070678_100009355
257 Ga0070662_100062589
258 Ga0068867_100005749
259 Ga0070707_100002640
260 Ga0070699_100077184
261 Ga0070699_100393663
262 Ga0070697_100020917
263 Ga0068853_100000341
264 Ga0068853_100026048
265 Ga0070665_100087675
266 Ga0070704_100517227
267 Ga0068854_100015876
268 Ga0068852_100015197
269 Ga0068852_100121413
270 Ga0068859_100210645
271 Ga0068864_100409927
272 Ga0068866_10002605
273 Ga0068861_100041838
274 Ga0068861_100339503
275 Ga0068863_100075253
276 Ga0068858_100005940
277 Ga0068860_100029135
278 Ga0068860_100030358
279 Ga0068862_100028471
280 Ga0081539_10020217
281 Ga0081539_10050965
282 Ga0075368_10057617
283 Ga0070715_10030457
284 Ga0070716_100056463
285 Ga0070712_100020870
286 Ga0075367_10063798
287 Ga0097621_100103699
288 Ga0075431_100240234
289 Ga0075434_100059253
290 Ga0075436_100101030
291 Ga0097620_100210645
292 Ga0105240_10218208
293 Ga0105245_10026316
294 Ga0105247_10128939
295 Ga0114129_10160002
296 Ga0114129_10406223
297 Ga0105243_10017993
298 Ga0105242_10004103
299 Ga0105242_10008923
300 Ga0105248_10000015
301 Ga0105238_10228247
302 Ga0105249_10059352
303 Ga0157315_1002766
304 Ga0157378_10010123
305 Ga0163162_10109290
306 Ga0157372_10015515
307 Ga0157375_10011371
308 Ga0157375_10501612
309 Ga0157380_10029267
310 Ga0163161_10031340
311 Ga0209051_1000411
312 Ga0209051_1000587
313 Ga0209257_1000137
314 Ga0207710_10111179
315 Ga0207688_10001794
316 Ga0207685_10024062
317 Ga0207705_10045685
318 Ga0207695_10080368
319 Ga0207693_10035049
320 Ga0207663_10048756
321 Ga0207652_10557026
322 Ga0207646_10000636
323 Ga0207687_10014286
324 Ga0207706_10049105
325 Ga0207686_10006087
326 Ga0207709_10023171
327 Ga0207669_10007840
328 Ga0207665_10083784
329 Ga0207711_10000003
330 Ga0207711_10000005
331 Ga0207711_10000009
332 Ga0207689_10064230
333 Ga0207712_10013949
334 Ga0207668_10041186
335 Ga0207668_10046107
336 Ga0207640_10090804
337 Ga0207658_10026817
338 Ga0207677_10035732
339 Ga0207677_10047453
340 Ga0207703_10030905
341 Ga0207639_10065873
342 Ga0207639_10236094
343 Ga0207678_10015590
344 Ga0207678_10229060
345 Ga0207641_10042590
346 Ga0207648_10008485
347 Ga0207675_100034945
348 Ga0207683_10009807
349 Ga0207698_10029065
350 Ga0268266_10075045
351 Ga0268265_10042859
352 Ga0268265_10137713
353 Ga0268264_10022905
354 Ga0268264_10095280
355 Ga0265334_10052568
356 Ga0265318_10000025
357 Ga0307515_10117290
358 Ga0265338_10000869
359 Ga0265332_10013504
360 Ga0265325_10000112
361 Ga0265339_10001618
362 Ga0265331_10000054
363 Ga0265331_10003224
364 Ga0307513_10010125
365 Ga0307513_10091796
366 Ga0307509_10013352
367 Ga0307408_100030063
368 Ga0265313_10001297
369 Ga0307508_10078892
370 Ga0316579_10006025
371 Ga0316579_10102745
372 Ga0265314_10059382
373 Ga0265342_10010281
374 Ga0316576_10084662
375 Ga0316576_10172856
376 Ga0316578_10063312
377 Ga0307516_10147827
378 Ga0316577_10012018
379 Ga0307409_100062410
380 Ga0307416_100180871
381 Ga0307416_100245658
382 Ga0307414_10138403
383 Ga0307414_10502817
384 Ga0307415_100039651
385 Ga0307415_100511443
386 Ga0316583_10000311
387 Ga0316580_10001874
388 Ga0316593_10014401
389 Ga0316593_10022987
390 Ga0307507_10092880
391 Ga0307510_10110383
392 Ga0316592_1003314
393 Ga0316596_1012468
394 Ga0373950_0008060
395 Ga0373951_0000164
396 Ga0373952_0000635
397 Ga0373945_0026852
398 Ga0373942_0000250
399 Ga0373962_0074834
400 Ga0316574_0014096
401 Ga0373937_0072761
402 Ga0316582_0051548
403 Ga0395899_0101920
404 Ga0395900_0032629
405 Ga0395900_0152622
406 Ga0395898_0206530
407 Ga0395905_0317594
408 Ga0436364_0716801
409 Ga0395901_0046096
410 Ga0395901_0628222
411 Ga0400487_64718
412 Ga0436363_0185021
413 Ga0451797_1454723
414 Ga0451843_0777766
415 Ga0439442_023489
416 Ga0439448_0000482
417 Ga0439450_000160
418 Ga0439455_0002211
419 Ga0439463_000248
420 Ga0450900_000086
421 Ga0450904_004415
422 Ga0439434_0000342
423 Ga0439464_0000173
424 Ga0439460_0000404
425 Ga0450916_000111
426 Ga0439440_0000183
427 Ga0466961_0144042
428 Ga0453684_0001181
429 Ga0466957_0053482
430 Ga0451576_0027009
431 Ga0451576_0071826
432 Ga0495586_0153621
433 Ga0496102_0038527
434 Ga0496106_0309464
435 Ga0496107_0034107
436 Ga0496108_0000294
437 Ga0496114_0075700
438 Ga0496115_0035731
439 Ga0496116_0000107
440 Ga0496119_0080059
441 Ga0496120_0002910
442 Ga0496121_0001160
443 Ga0496126_0061137
444 Ga0501067_0175473
445 Ga0501070_0097492
446 nmdc:mga0yw44_2366_c1
447 nmdc:mga06z11_34704_c1
448 nmdc:mga05p37_330955_c1
449 nmdc:mga05p37_516200_c1
450 nmdc:mga0n895_121316_c1
451 nmdc:mga0n895_53972_c1
452 nmdc:mga0n895_734985_c1
453 nmdc:mga0a205_303077_c1
454 Ga0500644_0002025
455 Ga0500562_014207
456 Ga0500616_0052822
457 Ga0501084_0000324
458 Ga0501082_0108439
459 2753266395
460 2791909813
461 2816424355
462 2837185958
463 2842890016
464 2866615185
465 2868091292
466 2868094622
467 2891637841
468 2919054203
469 2919445239
470 8004024362
471 8004028048
472 8008582010

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

1

158

0.99

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

161

281

0.97

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

1

92

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dll-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9815 2 289
4dll-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9797 2 287
4dll-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9747 2 289
1vpd-assembly1.cif.gz_A x-ray crystal structure of tartronate semialdehyde reductase [salmonella typhimurium lt2] 0.9647 1 292
4dll-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.963 2 287
ID Description Score Start End Superfamily
af_Q4DFE2_166_292_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9789 165 289 1.10.1040.10
af_A0A1D6NCX6_182_311_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9782 165 290 1.10.1040.10
af_Q9C991_11_173_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9772 2 162 3.40.50.720
af_F1QE62_28_195_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9766 2 163 3.40.50.720
3q3cA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9765 2 163 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7X6ISJ6-F1-model_v4 deleted 0.9935 57 175
AF-A0A1Q8JJV3-F1-model_v4 Glyoxylate carboligase (EC 4.1.1.47) 0.9917 2 293 GO:0000287
GO:0005948
GO:0009028
GO:0009097
GO:0009099
GO:0009436
GO:0016491
GO:0016874
GO:0030976
GO:0050660
GO:0050661
GO:0051287
AF-A0A3B0BGT5-F1-model_v4 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.9912 2 290 GO:0008679
GO:0016054
GO:0046487
GO:0050661
GO:0051287
AF-A0A1C4NDV8-F1-model_v4 deleted 0.991 1 293
AF-A0A1C4NDV8-F1-model_v4 deleted 0.9877 1 293

Map