F349526

General Info

Members Datasets Scaffolds Average Seq Length
236 179 472 305

Family's Representative Sequence

Representative Sequence 3300053154|Ga0500619_000114|Ga0500619_000114_6814_7701
Length 289
Sequence MIRIELQLELNYDIDDPNGADFVFNIHAAHTASQNVAFEKLSLSQPIVPHIHTDAVTGNRYMRLRAMQGPLKVSYAATVELTHHCADPAQLAEVPVHRLPPQVMGYIYPSRYCQSDRLVKLAINEFGSLWQGYGRVKAIQDWVKQRVTFTSNTSTDTLIEQVGVCRDFAHLMIALCRAVNIPARFATGTDFGADPALGPPDFHAYVEVYVGDRWYIFDPSGTAIPMAFVRFGTGRDAADVAFATIFGGVRAQAPMINAWAVEDASRGIVLPHHTLDALSTDSGMELMHR

Samples

Sample ID Description Type Environment
1 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
102 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
103 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
129 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
130 3300042118 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_082316_2156 Metagenome Rhizosphere
131 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
132 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
133 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
140 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
162 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
163 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
164 2547132374 Acidovorax radicis N35 Isolate Unclassified
165 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
166 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
167 2643221570 Acidovorax sp. Root568 Isolate Unclassified
168 2643221585 Pelomonas sp. Root662 Isolate Unclassified
169 2643221609 Acidovorax sp. Root217 Isolate Unclassified
170 2643221611 Acidovorax sp. Root219 Isolate Unclassified
171 2643221652 Acidovorax sp. Root402 Isolate Unclassified
172 2643221656 Pelomonas sp. Root405 Isolate Unclassified
173 2643221660 Methylibium sp. Root1272 Isolate Unclassified
174 2643221717 Acidovorax sp. Root267 Isolate Unclassified
175 2721755523 Delftia sp. HK171 Isolate Unclassified
176 2738543012 Acidovorax sp. CF301 Isolate Unclassified
177 2816332133 Acidovorax radicis 2721A Isolate Unclassified
178 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
179 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.22
Metatranscriptomes 0
Isolates 6.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.63
Nodule 0
Rhizoplane 5.08
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 1.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500619_000114 3300053154 Bacteria 21450
2 Ga0070676_10006918 3300005328 Bacteria 6074
3 Ga0070683_100061246 3300005329 Bacteria 3499
4 Ga0068869_100000831 3300005334 Bacteria 17639
5 Ga0070682_100006305 3300005337 Bacteria 6655
6 Ga0068868_100017589 3300005338 Bacteria 5330
7 Ga0070661_100067005 3300005344 Bacteria 2638
8 Ga0070668_100252296 3300005347 Bacteria 1465
9 Ga0070669_100012268 3300005353 Bacteria 6081
10 Ga0070675_100021552 3300005354 Bacteria 5150
11 Ga0070671_100195950 3300005355 Bacteria 1713
12 Ga0070673_100189679 3300005364 Bacteria 1765
13 Ga0070659_100032964 3300005366 Bacteria 4022
14 Ga0070659_100185641 3300005366 Bacteria 1708
15 Ga0070667_100003099 3300005367 Bacteria 14303
16 Ga0070667_100042743 3300005367 Bacteria 3802
17 Ga0070663_100013767 3300005455 Bacteria 5172
18 Ga0070678_100030654 3300005456 Bacteria 3700
19 Ga0070678_100113793 3300005456 Bacteria 2122
20 Ga0070662_100001911 3300005457 Bacteria 12790
21 Ga0068867_100253434 3300005459 Unclassified 1432
22 Ga0070684_100475232 3300005535 Bacteria 1156
23 Ga0068853_100009891 3300005539 Bacteria 7698
24 Ga0068853_100430354 3300005539 Bacteria 1239
25 Ga0070672_100015317 3300005543 Bacteria 5457
26 Ga0070672_100026622 3300005543 Bacteria 4306
27 Ga0070672_100098006 3300005543 Bacteria 2374
28 Ga0070665_100023738 3300005548 Bacteria 6177
29 Ga0070704_100389042 3300005549 Bacteria 1187
30 Ga0068855_100014375 3300005563 Bacteria 9530
31 Ga0068855_100451462 3300005563 Bacteria 1403
32 Ga0070664_100164638 3300005564 Bacteria 1964
33 Ga0068854_100036030 3300005578 Bacteria 3466
34 Ga0068856_100008698 3300005614 Bacteria 9878
35 Ga0070702_100061593 3300005615 Bacteria 2185
36 Ga0068852_100009829 3300005616 Bacteria 7115
37 Ga0068859_100089822 3300005617 Bacteria 3123
38 Ga0068859_100800991 3300005617 Bacteria 1030
39 Ga0068864_100009407 3300005618 Bacteria 8061
40 Ga0068861_100001501 3300005719 Bacteria 14807
41 Ga0068851_10008830 3300005834 Bacteria 4671
42 Ga0068851_10082050 3300005834 Bacteria 1685
43 Ga0068870_10054595 3300005840 Bacteria 2126
44 Ga0068858_100026385 3300005842 Bacteria 5399
45 Ga0068858_100030326 3300005842 Bacteria 5022
46 Ga0068860_100050728 3300005843 Bacteria 3949
47 Ga0075432_10017421 3300006058 Bacteria 2451
48 Ga0075362_10031228 3300006177 Bacteria 2304
49 Ga0075362_10071156 3300006177 Bacteria 1588
50 Ga0075367_10075595 3300006178 Bacteria 2032
51 Ga0075366_10029932 3300006195 Bacteria 3199
52 Ga0075366_10103220 3300006195 Bacteria 1712
53 Ga0097621_100036493 3300006237 Bacteria 3933
54 Ga0075370_10023516 3300006353 Bacteria 3394
55 Ga0075370_10209696 3300006353 Bacteria 1150
56 Ga0068871_100016424 3300006358 Bacteria 5574
57 Ga0075429_100105371 3300006880 Bacteria 2463
58 Ga0068865_100303902 3300006881 Bacteria 1278
59 Ga0068865_100360603 3300006881 Bacteria 1180
60 Ga0097620_100089819 3300006931 Bacteria 3123
61 Ga0097620_100801009 3300006931 Bacteria 1030
62 Ga0105240_10135355 3300009093 Bacteria 2951
63 Ga0105245_10008210 3300009098 Bacteria 9129
64 Ga0114129_10267681 3300009147 Bacteria 2287
65 Ga0105242_10005275 3300009176 Bacteria 9978
66 Ga0105248_10012705 3300009177 Bacteria 9293
67 Ga0105248_10167915 3300009177 Bacteria 2473
68 Ga0105248_10341285 3300009177 Bacteria 1686
69 Ga0105237_10110315 3300009545 Bacteria 2743
70 Ga0105238_10027033 3300009551 Bacteria 5848
71 Ga0105249_10019852 3300009553 Bacteria 6001
72 Ga0105249_10438686 3300009553 Bacteria 1343
73 Ga0105239_10043233 3300010375 Bacteria 4937
74 Ga0105239_10132543 3300010375 Bacteria 2773
75 Ga0157369_10138164 3300013105 Bacteria 2579
76 Ga0157374_10009999 3300013296 Bacteria 8144
77 Ga0163162_10023981 3300013306 Bacteria 6020
78 Ga0157372_10034998 3300013307 Bacteria 5526
79 Ga0157375_10014299 3300013308 Bacteria 7075
80 Ga0157377_10005893 3300014745 Bacteria 5799
81 Ga0157379_10009673 3300014968 Bacteria 8392
82 Ga0157379_10024800 3300014968 Bacteria 5323
83 Ga0157376_10011674 3300014969 Bacteria 6484
84 Ga0163161_10045313 3300017792 Bacteria 3171
85 Ga0207656_10005020 3300025321 Bacteria 4650
86 Ga0207656_10117922 3300025321 Bacteria 1233
87 Ga0207688_10004982 3300025901 Bacteria 7228
88 Ga0207645_10014950 3300025907 Bacteria 5173
89 Ga0207662_10127681 3300025918 Bacteria 1600
90 Ga0207657_10007455 3300025919 Bacteria 11218
91 Ga0207649_10016027 3300025920 Bacteria 4219
92 Ga0207681_10019757 3300025923 Bacteria 4262
93 Ga0207694_10045362 3300025924 Bacteria 3395
94 Ga0207659_10005391 3300025926 Bacteria 7749
95 Ga0207659_10179090 3300025926 Bacteria 1678
96 Ga0207687_10106781 3300025927 Bacteria 2070
97 Ga0207690_10211004 3300025932 Bacteria 1480
98 Ga0207706_10003732 3300025933 Bacteria 14522
99 Ga0207706_10063595 3300025933 Bacteria 3249
100 Ga0207704_10184998 3300025938 Bacteria 1509
101 Ga0207704_10355616 3300025938 Bacteria 1142
102 Ga0207691_10013215 3300025940 Bacteria 7906
103 Ga0207691_10134298 3300025940 Bacteria 2184
104 Ga0207711_10042399 3300025941 Bacteria 3877
105 Ga0207689_10001134 3300025942 Bacteria 25679
106 Ga0207679_10079714 3300025945 Bacteria 2498
107 Ga0207667_10064928 3300025949 Bacteria 3808
108 Ga0207651_10160461 3300025960 Bacteria 1762
109 Ga0207712_10240048 3300025961 Bacteria 1459
110 Ga0207668_10185043 3300025972 Bacteria 1646
111 Ga0207640_10045320 3300025981 Bacteria 2823
112 Ga0207640_10208028 3300025981 Bacteria 1488
113 Ga0207658_10006272 3300025986 Bacteria 8125
114 Ga0207703_10049525 3300026035 Bacteria 3397
115 Ga0207639_10013474 3300026041 Bacteria 5724
116 Ga0207678_10024632 3300026067 Bacteria 5257
117 Ga0207702_10020109 3300026078 Bacteria 5532
118 Ga0207676_10012976 3300026095 Bacteria 5982
119 Ga0207674_10006533 3300026116 Bacteria 13708
120 Ga0207675_100001046 3300026118 Bacteria 27412
121 Ga0207683_10059804 3300026121 Bacteria 3348
122 Ga0207683_10090370 3300026121 Bacteria 2727
123 Ga0207698_10021573 3300026142 Bacteria 4458
124 Ga0207698_10603386 3300026142 Bacteria 1082
125 Ga0209974_10001989 3300027876 Bacteria 7452
126 Ga0268266_10014195 3300028379 Bacteria 6852
127 Ga0268264_10047255 3300028381 Bacteria 3578
128 Ga0307515_10001343 3300028794 Bacteria 55676
129 Ga0307515_10001441 3300028794 Bacteria 53657
130 Ga0307515_10002592 3300028794 Bacteria 38996
131 Ga0307515_10007349 3300028794 Bacteria 21796
132 Ga0307515_10029535 3300028794 Bacteria 9259
133 Ga0307515_10046796 3300028794 Bacteria 6600
134 Ga0265324_10049698 3300029957 Bacteria 1442
135 Ga0265328_10011363 3300031239 Bacteria 3560
136 Ga0265328_10053357 3300031239 Bacteria 1483
137 Ga0265331_10001984 3300031250 Bacteria 14290
138 Ga0265327_10000028 3300031251 Bacteria 361066
139 Ga0265327_10000681 3300031251 Bacteria 54587
140 Ga0265316_10192065 3300031344 Unclassified 1516
141 Ga0307513_10008073 3300031456 Bacteria 13510
142 Ga0307513_10014169 3300031456 Bacteria 9755
143 Ga0307513_10168465 3300031456 Bacteria 2071
144 Ga0307509_10428603 3300031507 Bacteria 1022
145 Ga0307408_100000102 3300031548 Bacteria 94058
146 Ga0307408_100044632 3300031548 Bacteria 3160
147 Ga0307408_100127755 3300031548 Bacteria 1979
148 Ga0307408_100281046 3300031548 Bacteria 1386
149 Ga0307508_10000101 3300031616 Bacteria 100858
150 Ga0307514_10003026 3300031649 Bacteria 16615
151 Ga0265314_10028110 3300031711 Bacteria 4197
152 Ga0307516_10000926 3300031730 Bacteria 40364
153 Ga0307516_10003363 3300031730 Bacteria 20658
154 Ga0307516_10364306 3300031730 Bacteria 1109
155 Ga0307405_10003395 3300031731 Bacteria 7309
156 Ga0307413_10048533 3300031824 Bacteria 2538
157 Ga0307410_10064699 3300031852 Bacteria 2513
158 Ga0307406_10001893 3300031901 Bacteria 11415
159 Ga0307406_10011853 3300031901 Bacteria 4954
160 Ga0307412_10090506 3300031911 Bacteria 2139
161 Ga0307409_100031499 3300031995 Bacteria 3829
162 Ga0307416_100061535 3300032002 Bacteria 3064
163 Ga0307416_100257171 3300032002 Bacteria 1704
164 Ga0307414_10009776 3300032004 Bacteria 5527
165 Ga0307411_10000350 3300032005 Bacteria 15546
166 Ga0373929_0008242 3300035085 Bacteria 1919
167 Ga0373931_0004982 3300035691 Bacteria 6109
168 Ga0373927_0045910 3300035695 Bacteria 2827
169 Ga0373925_0066268 3300037068 Bacteria 2722
170 Ga0395905_0000353 3300037471 Bacteria 65228
171 Ga0395905_0001784 3300037471 Bacteria 24970
172 Ga0395905_0008106 3300037471 Bacteria 10377
173 Ga0395905_0016003 3300037471 Bacteria 7129
174 Ga0395901_0087825 3300038443 Bacteria 3251
175 Ga0242420_014704 3300038996 Bacteria 1347
176 Ga0451789_0482824 3300041443 Bacteria 1405
177 Ga0450914_001145 3300042118 Bacteria 1571
178 Ga0439446_0033661 3300042156 Bacteria 1489
179 Ga0451577_0003062 3300042876 Bacteria 18957
180 Ga0466965_0144894 3300044683 Bacteria 1239
181 Ga0451576_0000591 3300045051 Bacteria 76735
182 Ga0451576_0070702 3300045051 Bacteria 3632
183 Ga0451576_0902579 3300045051 Bacteria 927
184 Ga0495590_0008044 3300046457 Bacteria 4043
185 Ga0495590_0012721 3300046457 Bacteria 3114
186 Ga0495650_0043218 3300046471 Bacteria 1914
187 Ga0495632_0038475 3300046519 Bacteria 2421
188 Ga0495643_0022762 3300046522 Bacteria 3569
189 Ga0495643_0043670 3300046522 Bacteria 2438
190 Ga0495642_0188064 3300046528 Bacteria 899
191 Ga0495621_0000352 3300046539 Bacteria 11234
192 Ga0495621_0038548 3300046539 Bacteria 1667
193 Ga0495625_0007577 3300046660 Bacteria 9425
194 Ga0495660_0020102 3300046810 Bacteria 3830
195 Ga0495686_0065706 3300047472 Bacteria 2242
196 Ga0496100_0011526 3300048903 Bacteria 5034
197 Ga0496102_0010019 3300048905 Bacteria 8148
198 Ga0496102_0013648 3300048905 Bacteria 7041
199 Ga0496104_0077599 3300048907 Bacteria 3165
200 Ga0496106_0013114 3300048909 Bacteria 6116
201 Ga0496107_0107095 3300048910 Bacteria 2053
202 Ga0496108_0091590 3300048911 Bacteria 2584
203 Ga0496110_0009943 3300048913 Bacteria 7712
204 Ga0496111_0061293 3300048914 Bacteria 2727
205 Ga0496114_0025031 3300048917 Bacteria 4876
206 Ga0496115_0009356 3300048918 Bacteria 7280
207 Ga0496126_0067621 3300048929 Bacteria 3192
208 Ga0501222_002908 3300049662 Bacteria 2363
209 nmdc:mga0k408_207595_c1 3300050493 Bacteria 1170
210 nmdc:mga0k408_34831_c1 3300050493 Bacteria 2884
211 nmdc:mga0k408_59364_c2 3300050493 Bacteria 1719
212 nmdc:mga0k408_70990_c1 3300050493 Bacteria 2032
213 nmdc:mga07m45_18552_c2 3300050496 Bacteria 1037
214 nmdc:mga07m45_199358_c1 3300050496 Bacteria 1164
215 nmdc:mga05p37_56217_c1 3300050507 Bacteria 4844
216 nmdc:mga09592_110399_c1 3300050508 Bacteria 2359
217 Ga0500593_003349 3300053117 Bacteria 6035
218 Ga0500570_084828 3300053724 Bacteria 1408
219 Ga0500587_006560 3300053739 Bacteria 1539
220 Ga0500661_006428 3300055283 Unclassified 2186
221 2548497890 2547132374 Bacteria 5530232
222 2587757263 2585428062 Bacteria 6842168
223 2643741818 2643221544 Bacteria 5886209
224 2643868582 2643221570 Bacteria 5103772
225 2643935196 2643221585 Bacteria 5812563
226 2644058737 2643221609 Bacteria 6756331
227 2644072100 2643221611 Bacteria 6820941
228 2644295903 2643221652 Bacteria 5140275
229 2644314906 2643221656 Bacteria 5809961
230 2644341068 2643221660 Bacteria 4208257
231 2644649515 2643221717 Bacteria 5676132
232 2722884310 2721755523 Bacteria 6430384
233 2739245256 2738543012 Bacteria 7115078
234 2816471592 2816332133 Bacteria 7249298
235 2839140479 2839138175 Bacteria 6549354
236 2881101932 2881101125 Bacteria 4590519
237 Ga0500619_000114
238 Ga0070676_10006918
239 Ga0070683_100061246
240 Ga0068869_100000831
241 Ga0070682_100006305
242 Ga0068868_100017589
243 Ga0070661_100067005
244 Ga0070668_100252296
245 Ga0070669_100012268
246 Ga0070675_100021552
247 Ga0070671_100195950
248 Ga0070673_100189679
249 Ga0070659_100032964
250 Ga0070659_100185641
251 Ga0070667_100003099
252 Ga0070667_100042743
253 Ga0070663_100013767
254 Ga0070678_100030654
255 Ga0070678_100113793
256 Ga0070662_100001911
257 Ga0068867_100253434
258 Ga0070684_100475232
259 Ga0068853_100009891
260 Ga0068853_100430354
261 Ga0070672_100015317
262 Ga0070672_100026622
263 Ga0070672_100098006
264 Ga0070665_100023738
265 Ga0070704_100389042
266 Ga0068855_100014375
267 Ga0068855_100451462
268 Ga0070664_100164638
269 Ga0068854_100036030
270 Ga0068856_100008698
271 Ga0070702_100061593
272 Ga0068852_100009829
273 Ga0068859_100089822
274 Ga0068859_100800991
275 Ga0068864_100009407
276 Ga0068861_100001501
277 Ga0068851_10008830
278 Ga0068851_10082050
279 Ga0068870_10054595
280 Ga0068858_100026385
281 Ga0068858_100030326
282 Ga0068860_100050728
283 Ga0075432_10017421
284 Ga0075362_10031228
285 Ga0075362_10071156
286 Ga0075367_10075595
287 Ga0075366_10029932
288 Ga0075366_10103220
289 Ga0097621_100036493
290 Ga0075370_10023516
291 Ga0075370_10209696
292 Ga0068871_100016424
293 Ga0075429_100105371
294 Ga0068865_100303902
295 Ga0068865_100360603
296 Ga0097620_100089819
297 Ga0097620_100801009
298 Ga0105240_10135355
299 Ga0105245_10008210
300 Ga0114129_10267681
301 Ga0105242_10005275
302 Ga0105248_10012705
303 Ga0105248_10167915
304 Ga0105248_10341285
305 Ga0105237_10110315
306 Ga0105238_10027033
307 Ga0105249_10019852
308 Ga0105249_10438686
309 Ga0105239_10043233
310 Ga0105239_10132543
311 Ga0157369_10138164
312 Ga0157374_10009999
313 Ga0163162_10023981
314 Ga0157372_10034998
315 Ga0157375_10014299
316 Ga0157377_10005893
317 Ga0157379_10009673
318 Ga0157379_10024800
319 Ga0157376_10011674
320 Ga0163161_10045313
321 Ga0207656_10005020
322 Ga0207656_10117922
323 Ga0207688_10004982
324 Ga0207645_10014950
325 Ga0207662_10127681
326 Ga0207657_10007455
327 Ga0207649_10016027
328 Ga0207681_10019757
329 Ga0207694_10045362
330 Ga0207659_10005391
331 Ga0207659_10179090
332 Ga0207687_10106781
333 Ga0207690_10211004
334 Ga0207706_10003732
335 Ga0207706_10063595
336 Ga0207704_10184998
337 Ga0207704_10355616
338 Ga0207691_10013215
339 Ga0207691_10134298
340 Ga0207711_10042399
341 Ga0207689_10001134
342 Ga0207679_10079714
343 Ga0207667_10064928
344 Ga0207651_10160461
345 Ga0207712_10240048
346 Ga0207668_10185043
347 Ga0207640_10045320
348 Ga0207640_10208028
349 Ga0207658_10006272
350 Ga0207703_10049525
351 Ga0207639_10013474
352 Ga0207678_10024632
353 Ga0207702_10020109
354 Ga0207676_10012976
355 Ga0207674_10006533
356 Ga0207675_100001046
357 Ga0207683_10059804
358 Ga0207683_10090370
359 Ga0207698_10021573
360 Ga0207698_10603386
361 Ga0209974_10001989
362 Ga0268266_10014195
363 Ga0268264_10047255
364 Ga0307515_10001343
365 Ga0307515_10001441
366 Ga0307515_10002592
367 Ga0307515_10007349
368 Ga0307515_10029535
369 Ga0307515_10046796
370 Ga0265324_10049698
371 Ga0265328_10011363
372 Ga0265328_10053357
373 Ga0265331_10001984
374 Ga0265327_10000028
375 Ga0265327_10000681
376 Ga0265316_10192065
377 Ga0307513_10008073
378 Ga0307513_10014169
379 Ga0307513_10168465
380 Ga0307509_10428603
381 Ga0307408_100000102
382 Ga0307408_100044632
383 Ga0307408_100127755
384 Ga0307408_100281046
385 Ga0307508_10000101
386 Ga0307514_10003026
387 Ga0265314_10028110
388 Ga0307516_10000926
389 Ga0307516_10003363
390 Ga0307516_10364306
391 Ga0307405_10003395
392 Ga0307413_10048533
393 Ga0307410_10064699
394 Ga0307406_10001893
395 Ga0307406_10011853
396 Ga0307412_10090506
397 Ga0307409_100031499
398 Ga0307416_100061535
399 Ga0307416_100257171
400 Ga0307414_10009776
401 Ga0307411_10000350
402 Ga0373929_0008242
403 Ga0373931_0004982
404 Ga0373927_0045910
405 Ga0373925_0066268
406 Ga0395905_0000353
407 Ga0395905_0001784
408 Ga0395905_0008106
409 Ga0395905_0016003
410 Ga0395901_0087825
411 Ga0242420_014704
412 Ga0451789_0482824
413 Ga0450914_001145
414 Ga0439446_0033661
415 Ga0451577_0003062
416 Ga0466965_0144894
417 Ga0451576_0000591
418 Ga0451576_0070702
419 Ga0451576_0902579
420 Ga0495590_0008044
421 Ga0495590_0012721
422 Ga0495650_0043218
423 Ga0495632_0038475
424 Ga0495643_0022762
425 Ga0495643_0043670
426 Ga0495642_0188064
427 Ga0495621_0000352
428 Ga0495621_0038548
429 Ga0495625_0007577
430 Ga0495660_0020102
431 Ga0495686_0065706
432 Ga0496100_0011526
433 Ga0496102_0010019
434 Ga0496102_0013648
435 Ga0496104_0077599
436 Ga0496106_0013114
437 Ga0496107_0107095
438 Ga0496108_0091590
439 Ga0496110_0009943
440 Ga0496111_0061293
441 Ga0496114_0025031
442 Ga0496115_0009356
443 Ga0496126_0067621
444 Ga0501222_002908
445 nmdc:mga0k408_207595_c1
446 nmdc:mga0k408_34831_c1
447 nmdc:mga0k408_59364_c2
448 nmdc:mga0k408_70990_c1
449 nmdc:mga07m45_18552_c2
450 nmdc:mga07m45_199358_c1
451 nmdc:mga05p37_56217_c1
452 nmdc:mga09592_110399_c1
453 Ga0500593_003349
454 Ga0500570_084828
455 Ga0500587_006560
456 Ga0500661_006428
457 2548497890
458 2587757263
459 2643741818
460 2643868582
461 2643935196
462 2644058737
463 2644072100
464 2644295903
465 2644314906
466 2644341068
467 2644649515
468 2722884310
469 2739245256
470 2816471592
471 2839140479
472 2881101932

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01841

Transglut_core

Transglutaminase-like superfamily

124

219

0.94

PF04473

DUF553

Transglutaminase-like domain

112

243

0.86

PF21295

Bact_transglu_N_2

Bacterial transglutaminase, N-terminal domain

2

102

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.9119 2 283
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.8817 2 283
8tid-assembly1.cif.gz_H combined linker domain of n-drc and associated proteins tetrahymena 0.8337 136 197
2pfr-assembly3.cif.gz_A human n-acetyltransferase 2 0.6198 119 238
2pfr-assembly3.cif.gz_B-2 human n-acetyltransferase 2 0.6153 119 238
ID Description Score Start End Superfamily
3isrD02 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8807 4 82 2.60.40.2250
3isrC01 Alpha Beta;Roll;C8orf32 fold; 0.8735 82 254 3.10.620.30
af_Q50732_135_318_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8393 136 247 3.10.620.30
af_A4HSM4_58_281_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.836 136 195 3.10.620.30
3isrC01 Alpha Beta;Roll;C8orf32 fold; 0.8189 82 254 3.10.620.30
ID Description Score Start End GO Terms
AF-A0A2N2R0A2-F1-model_v4 Translation initiation factor IF-1 0.9576 1 289 GO:0003743
GO:0005737
GO:0019843
GO:0043022
AF-A0A7Y1ZX49-F1-model_v4 Transglutaminase family protein 0.9571 1 283
AF-A0A426GGI4-F1-model_v4 Transglutaminase family protein 0.9561 3 265
AF-C6XBK5-F1-model_v4 Transglutaminase domain protein 0.9558 1 286
AF-A0A4Q3N7X1-F1-model_v4 Transglutaminase family protein 0.9536 3 78

Map