F347593

General Info

Members Datasets Scaffolds Average Seq Length
234 161 468 177

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154189|2516020871
Length 197
Sequence LLGQLAAIFAPLSLVTIGGGQAIVAEIQRQVVEVHPWMTHSQFAADFAISRMAPGPGSLLVTLIGWQVAGFWGALVATAALLLPTAILIYGITHIWGRYQGAAWQLALERGLRPIAAGMMLAAGWVLLKSLNGGLPAKAIAVVSLCVLLRTRVSPLALLLAGALALFGVSLIGTGLPHWLQVQLSYKKLPAATTPRE

Samples

Sample ID Description Type Environment
1 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
76 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
79 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
109 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
110 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
111 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
117 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
138 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
139 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
140 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
141 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
144 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
145 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
146 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
147 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
148 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
149 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
150 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
151 2512875024
152 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
153 2818991450 Burkholderia sp. 604 Isolate Unclassified
154 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
155 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
156 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
157 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
158 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
159 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
160 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
161 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.31
Metatranscriptomes 0
Isolates 7.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.69
Nodule 2.14
Rhizoplane 2.14
Rhizosphere 73.93
Stem 0
Stem Tuber 0
Unclassified 9.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055529_1002404 3300003763 Bacteria 3659
2 Ga0055529_1004604 3300003763 Bacteria 2078
3 Ga0055536_1008691 3300003781 Bacteria 4317
4 Ga0070667_100371813 3300005367 Bacteria 1297
5 Ga0070709_10128010 3300005434 Bacteria 1730
6 Ga0070709_10708947 3300005434 Bacteria 783
7 Ga0070714_100085088 3300005435 Unclassified 2761
8 Ga0070714_100668805 3300005435 Bacteria 1000
9 Ga0070713_100133706 3300005436 Bacteria 2189
10 Ga0070713_100855353 3300005436 Bacteria 873
11 Ga0070710_10675325 3300005437 Bacteria 726
12 Ga0070711_100047580 3300005439 Bacteria 2929
13 Ga0070711_100127621 3300005439 Unclassified 1890
14 Ga0070694_100019813 3300005444 Bacteria 4282
15 Ga0070708_100049416 3300005445 Bacteria 3721
16 Ga0070708_100498960 3300005445 Unclassified 1148
17 Ga0070706_100049789 3300005467 Bacteria 3866
18 Ga0070707_100670305 3300005468 Bacteria 1000
19 Ga0070707_100758645 3300005468 Bacteria 934
20 Ga0070698_100019098 3300005471 Bacteria 7204
21 Ga0070698_100248408 3300005471 Bacteria 1712
22 Ga0070699_100105823 3300005518 Unclassified 2468
23 Ga0070697_100434679 3300005536 Bacteria 1142
24 Ga0068853_100337458 3300005539 Bacteria 1400
25 Ga0070696_100070667 3300005546 Bacteria 2456
26 Ga0070665_101834028 3300005548 Bacteria 613
27 Ga0070704_100018792 3300005549 Bacteria 4429
28 Ga0068859_100169936 3300005617 Bacteria 2261
29 Ga0068862_100294971 3300005844 Bacteria 1490
30 Ga0081539_10072978 3300005985 Bacteria 1832
31 Ga0070717_10001255 3300006028 Bacteria 17303
32 Ga0070717_10171153 3300006028 Unclassified 1889
33 Ga0075365_10105292 3300006038 Bacteria 1935
34 Ga0070712_100102216 3300006175 Bacteria 2122
35 Ga0070712_100107402 3300006175 Bacteria 2076
36 Ga0070712_100199140 3300006175 Bacteria 1572
37 Ga0070712_100212548 3300006175 Bacteria 1526
38 Ga0075362_10143803 3300006177 Bacteria 1141
39 Ga0075367_10014964 3300006178 Bacteria 4205
40 Ga0075428_100092580 3300006844 Bacteria 3296
41 Ga0075428_100203987 3300006844 Bacteria 2137
42 Ga0075430_100000712 3300006846 Bacteria 25408
43 Ga0075430_100004972 3300006846 Bacteria 11190
44 Ga0075430_100414513 3300006846 Bacteria 1112
45 Ga0075431_100001427 3300006847 Bacteria 21965
46 Ga0075431_100008963 3300006847 Bacteria 10029
47 Ga0075431_100045044 3300006847 Bacteria 4548
48 Ga0075431_100252639 3300006847 Bacteria 1791
49 Ga0075431_100695708 3300006847 Bacteria 994
50 Ga0075433_10054706 3300006852 Bacteria 3482
51 Ga0075434_100134286 3300006871 Bacteria 2494
52 Ga0075429_100000216 3300006880 Bacteria 38851
53 Ga0075429_100182032 3300006880 Bacteria 1841
54 Ga0075429_100587314 3300006880 Bacteria 976
55 Ga0075429_100801420 3300006880 Bacteria 825
56 Ga0075436_100073546 3300006914 Bacteria 2366
57 Ga0097620_100169956 3300006931 Bacteria 2261
58 Ga0099795_10057406 3300007788 Bacteria 1435
59 Ga0111539_10800537 3300009094 Bacteria 1097
60 Ga0105245_10549753 3300009098 Bacteria 1176
61 Ga0114129_10028119 3300009147 Bacteria 7966
62 Ga0114129_10115888 3300009147 Bacteria 3692
63 Ga0114129_10169038 3300009147 Bacteria 2982
64 Ga0105241_10533883 3300009174 Bacteria 1051
65 Ga0105237_11091904 3300009545 Bacteria 805
66 Ga0105238_10086913 3300009551 Bacteria 3114
67 Ga0105249_11315579 3300009553 Unclassified 794
68 Ga0099796_10033582 3300010159 Bacteria 1689
69 Ga0105239_10181399 3300010375 Bacteria 2355
70 Ga0105239_10233360 3300010375 Bacteria 2064
71 Ga0182008_10030913 3300014497 Bacteria 2697
72 Ga0182008_10515742 3300014497 Bacteria 659
73 Ga0157379_10551557 3300014968 Unclassified 1072
74 Ga0157379_10809455 3300014968 Bacteria 885
75 Ga0213872_10126321 3300021361 Bacteria 1129
76 Ga0213876_10156762 3300021384 Bacteria 1211
77 Ga0213875_10005464 3300021388 Bacteria 6813
78 Ga0213875_10077594 3300021388 Bacteria 1550
79 Ga0213871_10052290 3300021441 Bacteria 1122
80 Ga0209233_1000129 3300025261 Bacteria 206511
81 Ga0209455_1004261 3300025272 Bacteria 4755
82 Ga0207692_10117491 3300025898 Bacteria 1484
83 Ga0207710_10306447 3300025900 Bacteria 803
84 Ga0207647_10300786 3300025904 Bacteria 914
85 Ga0207699_10128174 3300025906 Bacteria 1651
86 Ga0207699_10139646 3300025906 Bacteria 1591
87 Ga0207684_10041914 3300025910 Bacteria 3880
88 Ga0207707_10354734 3300025912 Unclassified 1263
89 Ga0207695_10520397 3300025913 Unclassified 1071
90 Ga0207695_10658667 3300025913 Bacteria 928
91 Ga0207693_10005515 3300025915 Bacteria 10531
92 Ga0207693_10008502 3300025915 Bacteria 8402
93 Ga0207693_10020721 3300025915 Bacteria 5229
94 Ga0207693_10258188 3300025915 Unclassified 1366
95 Ga0207660_10052922 3300025917 Bacteria 2892
96 Ga0207652_10535656 3300025921 Bacteria 1053
97 Ga0207646_10887175 3300025922 Bacteria 792
98 Ga0207694_10008989 3300025924 Bacteria 7542
99 Ga0207694_10344747 3300025924 Bacteria 1232
100 Ga0207700_10164051 3300025928 Unclassified 1847
101 Ga0207664_10071522 3300025929 Bacteria 2795
102 Ga0207658_10143680 3300025986 Bacteria 1935
103 Ga0207639_10312584 3300026041 Bacteria 1392
104 Ga0207675_100743740 3300026118 Unclassified 992
105 Ga0268265_10462555 3300028380 Bacteria 1187
106 Ga0307408_100004634 3300031548 Bacteria 9293
107 Ga0307408_100038961 3300031548 Bacteria 3356
108 Ga0307405_10143361 3300031731 Bacteria 1669
109 Ga0307412_10022286 3300031911 Bacteria 3881
110 Ga0373940_0054635 3300035088 Bacteria 1129
111 Ga0373951_0007643 3300035091 Bacteria 2454
112 Ga0373936_0174348 3300035113 Bacteria 941
113 Ga0373941_0160863 3300035115 Bacteria 830
114 Ga0373931_0018056 3300035691 Bacteria 3501
115 Ga0373931_0464887 3300035691 Bacteria 811
116 Ga0373927_0364892 3300035695 Bacteria 952
117 Ga0373947_1030542 3300035725 Unclassified 561
118 Ga0373937_0004705 3300036401 Bacteria 11610
119 Ga0395899_0221535 3300037312 Bacteria 1310
120 Ga0395900_0005873 3300037418 Bacteria 12815
121 Ga0395898_0010647 3300037466 Bacteria 9607
122 Ga0436364_0024546 3300037853 Bacteria 2792
123 Ga0436364_0384406 3300037853 Bacteria 30015
124 Ga0436364_0815604 3300037853 Bacteria 735
125 Ga0395901_0002007 3300038443 Bacteria 20943
126 Ga0436365_0139910 3300039437 Bacteria 1224
127 Ga0436365_0829443 3300039437 Bacteria 1340
128 Ga0436360_0289577 3300039438 Unclassified 1164
129 Ga0436360_0892088 3300039438 Bacteria 2102
130 Ga0436360_1089569 3300039438 Bacteria 6779
131 Ga0436360_1161251 3300039438 Unclassified 1047
132 Ga0436360_1215137 3300039438 Bacteria 634
133 Ga0436361_0305838 3300039447 Bacteria 841
134 Ga0436361_1012482 3300039447 Bacteria 3658
135 Ga0436363_0160883 3300039450 Bacteria 2937
136 Ga0436363_0587500 3300039450 Unclassified 1112
137 Ga0436363_1717439 3300039450 Bacteria 1106
138 Ga0436362_0461246 3300039453 Bacteria 2607
139 Ga0436362_0482737 3300039453 Bacteria 1207
140 Ga0439460_0021069 3300042461 Bacteria 1778
141 Ga0453684_0731956 3300044712 Unclassified 1072
142 Ga0466967_0219435 3300045976 Bacteria 1806
143 Ga0495629_0079489 3300046459 Bacteria 2290
144 Ga0495650_0013392 3300046471 Bacteria 4338
145 Ga0495650_0041370 3300046471 Bacteria 1971
146 Ga0495580_0014662 3300046472 Bacteria 5940
147 Ga0495580_0108273 3300046472 Bacteria 1930
148 Ga0495606_0047401 3300046507 Bacteria 2832
149 Ga0495670_0045766 3300046691 Bacteria 2185
150 Ga0495686_0000594 3300047472 Bacteria 50426
151 Ga0495686_0217715 3300047472 Bacteria 1088
152 Ga0496102_0055742 3300048905 Bacteria 3604
153 Ga0496103_0069648 3300048906 Bacteria 2199
154 Ga0496111_0248312 3300048914 Bacteria 1321
155 Ga0496112_0000096 3300048915 Bacteria 57298
156 Ga0496112_0020064 3300048915 Bacteria 6328
157 Ga0496118_0136761 3300048921 Bacteria 1562
158 Ga0496119_0000147 3300048922 Bacteria 98899
159 Ga0496119_0197123 3300048922 Bacteria 1045
160 Ga0496120_0151277 3300048923 Bacteria 1166
161 Ga0496121_0008226 3300048924 Bacteria 12354
162 Ga0496121_0061279 3300048924 Bacteria 3088
163 Ga0496121_0227509 3300048924 Bacteria 1309
164 Ga0496121_0677335 3300048924 Bacteria 624
165 Ga0496122_0009207 3300048925 Bacteria 10456
166 Ga0496123_0001540 3300048926 Bacteria 31836
167 Ga0496124_0125664 3300048927 Bacteria 2044
168 Ga0496124_0126590 3300048927 Bacteria 2034
169 Ga0496124_0161314 3300048927 Bacteria 1747
170 Ga0496126_0333040 3300048929 Unclassified 1245
171 Ga0501039_0111665 3300049575 Bacteria 2137
172 Ga0501040_0912356 3300049576 Bacteria 636
173 Ga0501071_0069146 3300049587 Bacteria 2571
174 Ga0501072_0058535 3300049588 Bacteria 3037
175 Ga0501075_0201642 3300049591 Bacteria 1517
176 Ga0501076_0177497 3300049592 Bacteria 1736
177 Ga0501077_0124239 3300049593 Bacteria 1636
178 Ga0501077_0313801 3300049593 Bacteria 999
179 Ga0501079_0349632 3300049741 Bacteria 1158
180 Ga0501079_0803623 3300049741 Bacteria 740
181 Ga0501081_0750234 3300049743 Bacteria 733
182 Ga0501035_0010667 3300049822 Bacteria 8507
183 Ga0501035_0029780 3300049822 Bacteria 4979
184 Ga0501044_0001421 3300049823 Bacteria 28085
185 Ga0501045_0244247 3300049824 Bacteria 1336
186 nmdc:mga03683_295052_c1 3300050489 Bacteria 759
187 nmdc:mga03683_71480_c1 3300050489 Bacteria 1484
188 nmdc:mga0yw44_29617_c1 3300050492 Bacteria 3162
189 nmdc:mga06z11_77137_c1 3300050494 Bacteria 1778
190 nmdc:mga07m45_400812_c1 3300050496 Unclassified 796
191 nmdc:mga05p37_142770_c1 3300050507 Bacteria 2933
192 nmdc:mga05p37_23630_c1 3300050507 Bacteria 7462
193 nmdc:mga05p37_6867_c1 3300050507 Bacteria 13417
194 nmdc:mga09592_100678_c1 3300050508 Bacteria 2475
195 nmdc:mga09592_239185_c1 3300050508 Bacteria 1573
196 nmdc:mga09592_325219_c1 3300050508 Unclassified 1332
197 nmdc:mga09592_5185_c1 3300050508 Bacteria 10591
198 nmdc:mga09592_596047_c1 3300050508 Bacteria 947
199 nmdc:mga0qj67_4529_c1 3300050509 Bacteria 10069
200 nmdc:mga0qj67_64223_c1 3300050509 Bacteria 2920
201 nmdc:mga0qj67_688291_c1 3300050509 Unclassified 814
202 nmdc:mga06r32_1033335_c1 3300050510 Unclassified 773
203 nmdc:mga06r32_1062_c1 3300050510 Bacteria 24771
204 nmdc:mga06r32_154577_c1 3300050510 Bacteria 2275
205 nmdc:mga06r32_962512_c1 3300050510 Bacteria 808
206 nmdc:mga0n895_470879_c1 3300050512 Unclassified 1267
207 nmdc:mga0n895_561549_c1 3300050512 Bacteria 1146
208 nmdc:mga08x19_225761_c1 3300050514 Bacteria 1288
209 nmdc:mga0a205_250903_c1 3300050515 Bacteria 1649
210 Ga0500641_0021341 3300053096 Bacteria 2467
211 Ga0500556_0000065 3300053104 Bacteria 106261
212 Ga0500652_003596 3300053131 Bacteria 4707
213 Ga0500589_108831 3300053147 Bacteria 1192
214 Ga0500604_0051594 3300053151 Bacteria 1271
215 Ga0501082_1199208 3300060353 Bacteria 663
216 Ga0530510_0122472 3300061734 Bacteria 1910
217 2516020871 2515154189 Bacteria 9629850
218 2501075391 2501025501 Bacteria 7768574
219 2501085487 2501025502 Bacteria 9641094
220 2501409238 2501025504 Bacteria 8008976
221 2511090905 2510917013 Bacteria 9951648
222 2511098801 2510917014 Bacteria 8296963
223 2511109105 2510917015 Bacteria 7950052
224 2512959020 2512875024 Bacteria 7195110
225 2514038299 2513237164 Bacteria 7563725
226 2819619127 2818991450 Bacteria 6962147
227 2842325472 2842324504 Bacteria 9364110
228 2842349751 2842348783 Bacteria 9002918
229 2842455012 2842454564 Bacteria 8730687
230 2883092351 2883087390 Bacteria 9532701
231 2928114041 2928108538 Bacteria 7360024
232 2928141417 2928135762 Bacteria 7259641
233 2928504532 2928503688 Bacteria 7268108
234 3005411573 3005409236 Bacteria 7188837
235 Ga0055529_1002404
236 Ga0055529_1004604
237 Ga0055536_1008691
238 Ga0070667_100371813
239 Ga0070709_10128010
240 Ga0070709_10708947
241 Ga0070714_100085088
242 Ga0070714_100668805
243 Ga0070713_100133706
244 Ga0070713_100855353
245 Ga0070710_10675325
246 Ga0070711_100047580
247 Ga0070711_100127621
248 Ga0070694_100019813
249 Ga0070708_100049416
250 Ga0070708_100498960
251 Ga0070706_100049789
252 Ga0070707_100670305
253 Ga0070707_100758645
254 Ga0070698_100019098
255 Ga0070698_100248408
256 Ga0070699_100105823
257 Ga0070697_100434679
258 Ga0068853_100337458
259 Ga0070696_100070667
260 Ga0070665_101834028
261 Ga0070704_100018792
262 Ga0068859_100169936
263 Ga0068862_100294971
264 Ga0081539_10072978
265 Ga0070717_10001255
266 Ga0070717_10171153
267 Ga0075365_10105292
268 Ga0070712_100102216
269 Ga0070712_100107402
270 Ga0070712_100199140
271 Ga0070712_100212548
272 Ga0075362_10143803
273 Ga0075367_10014964
274 Ga0075428_100092580
275 Ga0075428_100203987
276 Ga0075430_100000712
277 Ga0075430_100004972
278 Ga0075430_100414513
279 Ga0075431_100001427
280 Ga0075431_100008963
281 Ga0075431_100045044
282 Ga0075431_100252639
283 Ga0075431_100695708
284 Ga0075433_10054706
285 Ga0075434_100134286
286 Ga0075429_100000216
287 Ga0075429_100182032
288 Ga0075429_100587314
289 Ga0075429_100801420
290 Ga0075436_100073546
291 Ga0097620_100169956
292 Ga0099795_10057406
293 Ga0111539_10800537
294 Ga0105245_10549753
295 Ga0114129_10028119
296 Ga0114129_10115888
297 Ga0114129_10169038
298 Ga0105241_10533883
299 Ga0105237_11091904
300 Ga0105238_10086913
301 Ga0105249_11315579
302 Ga0099796_10033582
303 Ga0105239_10181399
304 Ga0105239_10233360
305 Ga0182008_10030913
306 Ga0182008_10515742
307 Ga0157379_10551557
308 Ga0157379_10809455
309 Ga0213872_10126321
310 Ga0213876_10156762
311 Ga0213875_10005464
312 Ga0213875_10077594
313 Ga0213871_10052290
314 Ga0209233_1000129
315 Ga0209455_1004261
316 Ga0207692_10117491
317 Ga0207710_10306447
318 Ga0207647_10300786
319 Ga0207699_10128174
320 Ga0207699_10139646
321 Ga0207684_10041914
322 Ga0207707_10354734
323 Ga0207695_10520397
324 Ga0207695_10658667
325 Ga0207693_10005515
326 Ga0207693_10008502
327 Ga0207693_10020721
328 Ga0207693_10258188
329 Ga0207660_10052922
330 Ga0207652_10535656
331 Ga0207646_10887175
332 Ga0207694_10008989
333 Ga0207694_10344747
334 Ga0207700_10164051
335 Ga0207664_10071522
336 Ga0207658_10143680
337 Ga0207639_10312584
338 Ga0207675_100743740
339 Ga0268265_10462555
340 Ga0307408_100004634
341 Ga0307408_100038961
342 Ga0307405_10143361
343 Ga0307412_10022286
344 Ga0373940_0054635
345 Ga0373951_0007643
346 Ga0373936_0174348
347 Ga0373941_0160863
348 Ga0373931_0018056
349 Ga0373931_0464887
350 Ga0373927_0364892
351 Ga0373947_1030542
352 Ga0373937_0004705
353 Ga0395899_0221535
354 Ga0395900_0005873
355 Ga0395898_0010647
356 Ga0436364_0024546
357 Ga0436364_0384406
358 Ga0436364_0815604
359 Ga0395901_0002007
360 Ga0436365_0139910
361 Ga0436365_0829443
362 Ga0436360_0289577
363 Ga0436360_0892088
364 Ga0436360_1089569
365 Ga0436360_1161251
366 Ga0436360_1215137
367 Ga0436361_0305838
368 Ga0436361_1012482
369 Ga0436363_0160883
370 Ga0436363_0587500
371 Ga0436363_1717439
372 Ga0436362_0461246
373 Ga0436362_0482737
374 Ga0439460_0021069
375 Ga0453684_0731956
376 Ga0466967_0219435
377 Ga0495629_0079489
378 Ga0495650_0013392
379 Ga0495650_0041370
380 Ga0495580_0014662
381 Ga0495580_0108273
382 Ga0495606_0047401
383 Ga0495670_0045766
384 Ga0495686_0000594
385 Ga0495686_0217715
386 Ga0496102_0055742
387 Ga0496103_0069648
388 Ga0496111_0248312
389 Ga0496112_0000096
390 Ga0496112_0020064
391 Ga0496118_0136761
392 Ga0496119_0000147
393 Ga0496119_0197123
394 Ga0496120_0151277
395 Ga0496121_0008226
396 Ga0496121_0061279
397 Ga0496121_0227509
398 Ga0496121_0677335
399 Ga0496122_0009207
400 Ga0496123_0001540
401 Ga0496124_0125664
402 Ga0496124_0126590
403 Ga0496124_0161314
404 Ga0496126_0333040
405 Ga0501039_0111665
406 Ga0501040_0912356
407 Ga0501071_0069146
408 Ga0501072_0058535
409 Ga0501075_0201642
410 Ga0501076_0177497
411 Ga0501077_0124239
412 Ga0501077_0313801
413 Ga0501079_0349632
414 Ga0501079_0803623
415 Ga0501081_0750234
416 Ga0501035_0010667
417 Ga0501035_0029780
418 Ga0501044_0001421
419 Ga0501045_0244247
420 nmdc:mga03683_295052_c1
421 nmdc:mga03683_71480_c1
422 nmdc:mga0yw44_29617_c1
423 nmdc:mga06z11_77137_c1
424 nmdc:mga07m45_400812_c1
425 nmdc:mga05p37_142770_c1
426 nmdc:mga05p37_23630_c1
427 nmdc:mga05p37_6867_c1
428 nmdc:mga09592_100678_c1
429 nmdc:mga09592_239185_c1
430 nmdc:mga09592_325219_c1
431 nmdc:mga09592_5185_c1
432 nmdc:mga09592_596047_c1
433 nmdc:mga0qj67_4529_c1
434 nmdc:mga0qj67_64223_c1
435 nmdc:mga0qj67_688291_c1
436 nmdc:mga06r32_1033335_c1
437 nmdc:mga06r32_1062_c1
438 nmdc:mga06r32_154577_c1
439 nmdc:mga06r32_962512_c1
440 nmdc:mga0n895_470879_c1
441 nmdc:mga0n895_561549_c1
442 nmdc:mga08x19_225761_c1
443 nmdc:mga0a205_250903_c1
444 Ga0500641_0021341
445 Ga0500556_0000065
446 Ga0500652_003596
447 Ga0500589_108831
448 Ga0500604_0051594
449 Ga0501082_1199208
450 Ga0530510_0122472
451 2516020871
452 2501075391
453 2501085487
454 2501409238
455 2511090905
456 2511098801
457 2511109105
458 2512959020
459 2514038299
460 2819619127
461 2842325472
462 2842349751
463 2842455012
464 2883092351
465 2928114041
466 2928141417
467 2928504532
468 3005411573

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02417

Chromate_transp

Chromate transporter

3

167

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f5c-assembly1.cif.gz_C structure of dax-1:lrh-1 complex 0.1898 2 150
3f5c-assembly1.cif.gz_C structure of dax-1:lrh-1 complex 0.1664 2 150
ID Description Score Start End Superfamily
af_A0A0R0K7P9_1_212_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.3819 41 112 1.10.10.10
af_I1JYC9_28_130_1.20.930.10 Mainly Alpha;Up-down Bundle;Transcription Elongation Factor S-II; Chain A;Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.3072 5 106 1.20.930.10
af_I1KB67_1_98_1.20.930.10 Mainly Alpha;Up-down Bundle;Transcription Elongation Factor S-II; Chain A;Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.2993 1 106 1.20.930.10
af_K7ML54_274_397_1.10.472.80 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Ypt/Rab-GAP domain of gyp1p, domain 3 0.2991 6 84 1.10.472.80
af_I1KB67_1_98_1.20.930.10 Mainly Alpha;Up-down Bundle;Transcription Elongation Factor S-II; Chain A;Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.2928 1 106 1.20.930.10
ID Description Score Start End GO Terms
AF-A0A353RS64-F1-model_v4 Chromate transporter 0.9257 5 101 GO:0005886
GO:0015109
AF-A0A257Z3L1-F1-model_v4 Chromate transporter 0.9149 5 121 GO:0005886
GO:0015109
AF-A0A660TE47-F1-model_v4 Chromate transporter 0.9134 5 105 GO:0005886
GO:0015109
AF-A0A399SQ28-F1-model_v4 Chromate efflux transporter 0.9123 3 110 GO:0005886
GO:0015109
AF-A0A239AIM3-F1-model_v4 Chromate transporter, chromate ion transporter (CHR) family 0.9121 5 101 GO:0005886
GO:0015109

Map