F345225

General Info

Members Datasets Scaffolds Average Seq Length
232 150 464 453

Family's Representative Sequence

Representative Sequence 3300031852|Ga0307410_10016721|Ga0307410_100167211
Length 507
Sequence VLITILALIVVLGVLIFIHEAGHFLAAKWAGIYVHRFSLGLGSPIPWLTFRRGETEYSISWLPLGGYVKMASREEDVTSSALEGGHAEAAVPADRVFEAKPVWKRMVVILAGVTMNAVFAWLAFSFLATKNGRQIDPSTTVGQVIEEMVPPGAEALREIPAGSRIVAINGRPVAAWNDVVDGIANAPESEIRIELEGGETVTLPIHQDALEQRLKASQALQPFRPAVVDQVLPGKPAARAGLQPGDTIVAMRNRPIGQWYDVLEVLQESGKQPMAMTVGRPGGRRTLTVQPEVQTVEGLDGKPREVGRVGISVKLEHRSESLSLGEGLVEGWKATMSASTQIVRTVRGLFSGRISRREVGGPIMIGQLAGESARMGLDPFVAFMALISINLAILNLLPVPVLDGGQFLFLLAEAVIRRPLPLKLRERLTAVGMVLIVLLMGLAFSNDIRRLLGGCGGRTGGRRVGSPHSGRWRVTPLNKGATSIAQLGSGSLRWPTTTSGSAAHGLC

Samples

Sample ID Description Type Environment
1 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
90 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
96 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
97 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
128 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
129 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
130 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
131 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
137 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
138 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
139 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
148 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.48
Rhizosphere 90.09
Stem 0
Stem Tuber 0
Unclassified 6.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307410_10016721 3300031852 Bacteria 4385
2 rootL2_10237570 3300003322 Unclassified 2508
3 Ga0070676_10000437 3300005328 Bacteria 19793
4 Ga0070683_100064576 3300005329 Bacteria 3408
5 Ga0068869_100002493 3300005334 Bacteria 11099
6 Ga0070680_100013471 3300005336 Bacteria 6369
7 Ga0070669_100019809 3300005353 Bacteria 4808
8 Ga0070673_100080737 3300005364 Bacteria 2636
9 Ga0070667_100091425 3300005367 Bacteria 2617
10 Ga0070713_100198204 3300005436 Bacteria 1812
11 Ga0070711_100001188 3300005439 Bacteria 14061
12 Ga0070711_100047047 3300005439 Bacteria 2943
13 Ga0070705_100009594 3300005440 Bacteria 4817
14 Ga0070705_100018151 3300005440 Bacteria 3683
15 Ga0070705_100038759 3300005440 Bacteria 2699
16 Ga0070694_100035747 3300005444 Bacteria 3286
17 Ga0070708_100037299 3300005445 Bacteria 4239
18 Ga0070708_100071903 3300005445 Bacteria 3115
19 Ga0070708_100265960 3300005445 Bacteria 1612
20 Ga0070678_100004694 3300005456 Bacteria 7779
21 Ga0070662_100005405 3300005457 Bacteria 8162
22 Ga0070681_10024249 3300005458 Bacteria 6106
23 Ga0068867_100005955 3300005459 Bacteria 8648
24 Ga0070706_100009104 3300005467 Bacteria 9247
25 Ga0070706_100172133 3300005467 Bacteria 2022
26 Ga0070707_100108285 3300005468 Bacteria 2695
27 Ga0070707_100223900 3300005468 Bacteria 1832
28 Ga0070707_100292149 3300005468 Bacteria 1584
29 Ga0070698_100005453 3300005471 Bacteria 13895
30 Ga0070698_100049075 3300005471 Bacteria 4311
31 Ga0070699_100000036 3300005518 Bacteria 133816
32 Ga0070699_100024376 3300005518 Bacteria 5213
33 Ga0070679_100012367 3300005530 Bacteria 8154
34 Ga0070679_100102602 3300005530 Unclassified 2847
35 Ga0070697_100022847 3300005536 Bacteria 4973
36 Ga0070697_100028654 3300005536 Bacteria 4461
37 Ga0070693_100023971 3300005547 Bacteria 3268
38 Ga0070693_100083249 3300005547 Bacteria 1912
39 Ga0068855_100042433 3300005563 Bacteria 5390
40 Ga0068857_100005725 3300005577 Bacteria 10629
41 Ga0068854_100001678 3300005578 Bacteria 13488
42 Ga0070702_100039340 3300005615 Bacteria 2639
43 Ga0068859_100051018 3300005617 Bacteria 4157
44 Ga0068864_100000682 3300005618 Bacteria 28462
45 Ga0068864_100191346 3300005618 Bacteria 1876
46 Ga0068866_10000546 3300005718 Bacteria 17164
47 Ga0068863_100010948 3300005841 Bacteria 8796
48 Ga0068863_100174487 3300005841 Bacteria 2063
49 Ga0068860_100024599 3300005843 Bacteria 5815
50 Ga0075428_100051465 3300006844 Bacteria 4516
51 Ga0075428_100058178 3300006844 Bacteria 4232
52 Ga0075430_100009200 3300006846 Bacteria 8348
53 Ga0075431_100003380 3300006847 Bacteria 15474
54 Ga0075433_10186971 3300006852 Bacteria 1843
55 Ga0075434_100130138 3300006871 Bacteria 2535
56 Ga0075429_100010080 3300006880 Bacteria 8188
57 Ga0097620_100051018 3300006931 Bacteria 4157
58 Ga0111539_10364811 3300009094 Bacteria 1681
59 Ga0105245_10109256 3300009098 Bacteria 2570
60 Ga0114129_10000424 3300009147 Bacteria 50149
61 Ga0114129_10122146 3300009147 Bacteria 3584
62 Ga0114129_10123156 3300009147 Bacteria 3567
63 Ga0105242_10000297 3300009176 Bacteria 39548
64 Ga0105248_10000630 3300009177 Bacteria 40000
65 Ga0105249_10017461 3300009553 Bacteria 6370
66 Ga0163162_10053174 3300013306 Bacteria 4070
67 Ga0163162_10077095 3300013306 Bacteria 3396
68 Ga0163162_10121831 3300013306 Bacteria 2713
69 Ga0157379_10123132 3300014968 Bacteria 2334
70 Ga0207642_10000820 3300025899 Bacteria 9679
71 Ga0207645_10001002 3300025907 Bacteria 23327
72 Ga0207684_10083918 3300025910 Bacteria 2713
73 Ga0207707_10193859 3300025912 Bacteria 1772
74 Ga0207663_10008747 3300025916 Bacteria 5317
75 Ga0207663_10059013 3300025916 Bacteria 2425
76 Ga0207652_10068869 3300025921 Unclassified 3071
77 Ga0207646_10015549 3300025922 Bacteria 7184
78 Ga0207681_10115040 3300025923 Bacteria 1963
79 Ga0207659_10085552 3300025926 Bacteria 2343
80 Ga0207706_10000065 3300025933 Bacteria 109080
81 Ga0207706_10163384 3300025933 Unclassified 1957
82 Ga0207686_10000382 3300025934 Bacteria 30919
83 Ga0207704_10006300 3300025938 Bacteria 5521
84 Ga0207691_10142221 3300025940 Bacteria 2114
85 Ga0207711_10001822 3300025941 Bacteria 19440
86 Ga0207689_10011186 3300025942 Bacteria 7698
87 Ga0207712_10003413 3300025961 Bacteria 10038
88 Ga0207640_10019750 3300025981 Bacteria 3987
89 Ga0207639_10164960 3300026041 Bacteria 1870
90 Ga0207648_10000211 3300026089 Bacteria 62641
91 Ga0207676_10041517 3300026095 Bacteria 3532
92 Ga0207676_10086634 3300026095 Bacteria 2559
93 Ga0207674_10003334 3300026116 Bacteria 19745
94 Ga0207683_10130959 3300026121 Bacteria 2256
95 Ga0209968_1010261 3300027526 Bacteria 1439
96 Ga0209974_10014538 3300027876 Bacteria 2618
97 Ga0268264_10011521 3300028381 Bacteria 7304
98 Ga0307408_100008720 3300031548 Bacteria 6697
99 Ga0307408_100036162 3300031548 Bacteria 3471
100 Ga0307408_100128711 3300031548 Bacteria 1972
101 Ga0316575_10001358 3300031665 Bacteria 7856
102 Ga0316576_10125459 3300031727 Bacteria 1929
103 Ga0316578_10003404 3300031728 Bacteria 7265
104 Ga0307405_10000218 3300031731 Bacteria 20640
105 Ga0307405_10014861 3300031731 Bacteria 4200
106 Ga0307413_10036176 3300031824 Bacteria 2840
107 Ga0307413_10061401 3300031824 Unclassified 2319
108 Ga0307410_10000914 3300031852 Bacteria 12588
109 Ga0307410_10001373 3300031852 Bacteria 10947
110 Ga0307410_10002272 3300031852 Bacteria 9207
111 Ga0307410_10013518 3300031852 Bacteria 4766
112 Ga0307410_10038663 3300031852 Unclassified 3127
113 Ga0307406_10005963 3300031901 Bacteria 6687
114 Ga0307406_10027299 3300031901 Bacteria 3439
115 Ga0307406_10029259 3300031901 Bacteria 3335
116 Ga0307407_10000760 3300031903 Bacteria 10598
117 Ga0307407_10085729 3300031903 Unclassified 1917
118 Ga0307412_10041762 3300031911 Unclassified 2975
119 Ga0307412_10055323 3300031911 Bacteria 2638
120 Ga0307409_100001843 3300031995 Bacteria 10779
121 Ga0307409_100010468 3300031995 Bacteria 5771
122 Ga0307409_100035507 3300031995 Bacteria 3654
123 Ga0307409_100040479 3300031995 Bacteria 3471
124 Ga0307416_100000572 3300032002 Bacteria 18859
125 Ga0307416_100003700 3300032002 Bacteria 9064
126 Ga0307416_100022332 3300032002 Bacteria 4566
127 Ga0307416_100045466 3300032002 Bacteria 3457
128 Ga0307416_100082025 3300032002 Bacteria 2730
129 Ga0307416_100337749 3300032002 Bacteria 1517
130 Ga0307414_10009437 3300032004 Bacteria 5606
131 Ga0307414_10017236 3300032004 Bacteria 4414
132 Ga0307414_10028516 3300032004 Bacteria 3623
133 Ga0307414_10080556 3300032004 Bacteria 2381
134 Ga0307414_10129179 3300032004 Bacteria 1958
135 Ga0307414_10177569 3300032004 Bacteria 1709
136 Ga0307414_10177611 3300032004 Bacteria 1709
137 Ga0307411_10000364 3300032005 Bacteria 15341
138 Ga0307411_10010250 3300032005 Bacteria 4984
139 Ga0307411_10049359 3300032005 Bacteria 2734
140 Ga0307411_10104651 3300032005 Bacteria 2010
141 Ga0307415_100008520 3300032126 Bacteria 5690
142 Ga0307415_100018491 3300032126 Bacteria 4210
143 Ga0242420_010550 3300038996 Bacteria 1537
144 Ga0439439_0001298 3300041406 Bacteria 4895
145 Ga0451577_0042336 3300042876 Bacteria 4085
146 Ga0453683_0050360 3300044673 Bacteria 2610
147 Ga0453683_0138514 3300044673 Bacteria 1535
148 Ga0453684_0058231 3300044712 Bacteria 4992
149 Ga0451576_0020947 3300045051 Bacteria 7114
150 Ga0495603_0005284 3300046455 Bacteria 7698
151 Ga0495664_0010673 3300046477 Bacteria 5158
152 Ga0495594_0000990 3300046499 Bacteria 14764
153 Ga0495640_0051775 3300046533 Bacteria 2821
154 Ga0495586_0001882 3300046535 Bacteria 11418
155 Ga0495634_0002653 3300046642 Bacteria 14697
156 Ga0495674_0003864 3300047319 Bacteria 14553
157 Ga0496100_0180817 3300048903 Bacteria 1525
158 Ga0496104_0018713 3300048907 Bacteria 6322
159 Ga0496104_0165246 3300048907 Bacteria 2122
160 Ga0496106_0006718 3300048909 Bacteria 8523
161 Ga0496106_0127890 3300048909 Bacteria 1990
162 Ga0496107_0163137 3300048910 Bacteria 1652
163 Ga0496108_0002642 3300048911 Bacteria 14363
164 Ga0496108_0026951 3300048911 Bacteria 4742
165 Ga0496109_0014730 3300048912 Bacteria 6804
166 Ga0496109_0016782 3300048912 Bacteria 6407
167 Ga0496109_0020966 3300048912 Bacteria 5776
168 Ga0496110_0020244 3300048913 Bacteria 5615
169 Ga0496110_0056661 3300048913 Bacteria 3449
170 Ga0496110_0135716 3300048913 Bacteria 2223
171 Ga0496111_0000989 3300048914 Bacteria 15575
172 Ga0496111_0061343 3300048914 Bacteria 2726
173 Ga0496111_0125251 3300048914 Bacteria 1899
174 Ga0496112_0009314 3300048915 Bacteria 8834
175 Ga0496112_0015928 3300048915 Bacteria 7026
176 Ga0496112_0025561 3300048915 Bacteria 5670
177 Ga0496113_0000737 3300048916 Bacteria 16807
178 Ga0496114_0024277 3300048917 Bacteria 4947
179 Ga0501292_007382 3300049515 Unclassified 1587
180 Ga0501036_0072099 3300049572 Unclassified 2920
181 Ga0501040_0123043 3300049576 Bacteria 1821
182 Ga0501041_0032594 3300049577 Bacteria 3149
183 Ga0501042_0024651 3300049578 Bacteria 4221
184 Ga0501042_0031869 3300049578 Bacteria 3730
185 Ga0501048_0016773 3300049582 Bacteria 5399
186 Ga0501048_0089387 3300049582 Bacteria 2173
187 Ga0501067_0002587 3300049583 Bacteria 9997
188 Ga0501069_0024364 3300049585 Bacteria 3300
189 Ga0501070_0220036 3300049586 Bacteria 1557
190 Ga0501071_0000917 3300049587 Bacteria 15933
191 Ga0501071_0148620 3300049587 Bacteria 1747
192 Ga0501073_0003139 3300049589 Bacteria 12388
193 Ga0501074_0003370 3300049590 Bacteria 11322
194 Ga0501076_0006144 3300049592 Bacteria 8695
195 Ga0501076_0013971 3300049592 Bacteria 6032
196 Ga0501076_0078290 3300049592 Bacteria 2653
197 Ga0501077_0000669 3300049593 Bacteria 20702
198 Ga0501077_0007208 3300049593 Bacteria 6859
199 Ga0501209_005872 3300049656 Bacteria 2249
200 Ga0501235_007553 3300049669 Bacteria 2367
201 Ga0501247_001448 3300049677 Bacteria 2291
202 Ga0501249_016221 3300049679 Unclassified 1598
203 Ga0501256_002739 3300049685 Unclassified 1421
204 Ga0501079_0005272 3300049741 Bacteria 9613
205 Ga0501079_0088158 3300049741 Unclassified 2403
206 Ga0501079_0109998 3300049741 Bacteria 2141
207 Ga0501080_0017347 3300049742 Bacteria 6656
208 Ga0501081_0019357 3300049743 Bacteria 4534
209 Ga0501083_0097203 3300049744 Bacteria 1943
210 Ga0501263_000543 3300049760 Bacteria 2898
211 Ga0501267_000158 3300049764 Bacteria 4506
212 Ga0501268_000659 3300049765 Bacteria 3888
213 Ga0501272_000360 3300049769 Bacteria 4003
214 Ga0501045_0030309 3300049824 Bacteria 3915
215 nmdc:mga05p37_114794_c1 3300050507 Unclassified 3311
216 nmdc:mga05p37_246976_c1 3300050507 Bacteria 2142
217 nmdc:mga05p37_98280_c1 3300050507 Bacteria 3605
218 nmdc:mga09592_2623_c1 3300050508 Bacteria 14556
219 nmdc:mga09592_33567_c1 3300050508 Bacteria 4284
220 nmdc:mga06r32_65326_c1 3300050510 Bacteria 3509
221 nmdc:mga0n895_103309_c1 3300050512 Bacteria 2861
222 nmdc:mga0n895_21028_c1 3300050512 Bacteria 6097
223 nmdc:mga0rr50_245302_c1 3300050513 Bacteria 1486
224 Ga0501084_0008141 3300054114 Bacteria 8641
225 Ga0501084_0041459 3300054114 Bacteria 3851
226 Ga0590071_001041 3300059421 Bacteria 7529
227 Ga0590077_006618 3300059426 Bacteria 2372
228 Ga0501082_0025645 3300060353 Bacteria 5079
229 Ga0501082_0036448 3300060353 Bacteria 4238
230 Ga0501082_0042108 3300060353 Bacteria 3937
231 Ga0501082_0138019 3300060353 Bacteria 2116
232 Ga0530510_0135307 3300061734 Bacteria 1814
233 Ga0307410_10016721
234 rootL2_10237570
235 Ga0070676_10000437
236 Ga0070683_100064576
237 Ga0068869_100002493
238 Ga0070680_100013471
239 Ga0070669_100019809
240 Ga0070673_100080737
241 Ga0070667_100091425
242 Ga0070713_100198204
243 Ga0070711_100001188
244 Ga0070711_100047047
245 Ga0070705_100009594
246 Ga0070705_100018151
247 Ga0070705_100038759
248 Ga0070694_100035747
249 Ga0070708_100037299
250 Ga0070708_100071903
251 Ga0070708_100265960
252 Ga0070678_100004694
253 Ga0070662_100005405
254 Ga0070681_10024249
255 Ga0068867_100005955
256 Ga0070706_100009104
257 Ga0070706_100172133
258 Ga0070707_100108285
259 Ga0070707_100223900
260 Ga0070707_100292149
261 Ga0070698_100005453
262 Ga0070698_100049075
263 Ga0070699_100000036
264 Ga0070699_100024376
265 Ga0070679_100012367
266 Ga0070679_100102602
267 Ga0070697_100022847
268 Ga0070697_100028654
269 Ga0070693_100023971
270 Ga0070693_100083249
271 Ga0068855_100042433
272 Ga0068857_100005725
273 Ga0068854_100001678
274 Ga0070702_100039340
275 Ga0068859_100051018
276 Ga0068864_100000682
277 Ga0068864_100191346
278 Ga0068866_10000546
279 Ga0068863_100010948
280 Ga0068863_100174487
281 Ga0068860_100024599
282 Ga0075428_100051465
283 Ga0075428_100058178
284 Ga0075430_100009200
285 Ga0075431_100003380
286 Ga0075433_10186971
287 Ga0075434_100130138
288 Ga0075429_100010080
289 Ga0097620_100051018
290 Ga0111539_10364811
291 Ga0105245_10109256
292 Ga0114129_10000424
293 Ga0114129_10122146
294 Ga0114129_10123156
295 Ga0105242_10000297
296 Ga0105248_10000630
297 Ga0105249_10017461
298 Ga0163162_10053174
299 Ga0163162_10077095
300 Ga0163162_10121831
301 Ga0157379_10123132
302 Ga0207642_10000820
303 Ga0207645_10001002
304 Ga0207684_10083918
305 Ga0207707_10193859
306 Ga0207663_10008747
307 Ga0207663_10059013
308 Ga0207652_10068869
309 Ga0207646_10015549
310 Ga0207681_10115040
311 Ga0207659_10085552
312 Ga0207706_10000065
313 Ga0207706_10163384
314 Ga0207686_10000382
315 Ga0207704_10006300
316 Ga0207691_10142221
317 Ga0207711_10001822
318 Ga0207689_10011186
319 Ga0207712_10003413
320 Ga0207640_10019750
321 Ga0207639_10164960
322 Ga0207648_10000211
323 Ga0207676_10041517
324 Ga0207676_10086634
325 Ga0207674_10003334
326 Ga0207683_10130959
327 Ga0209968_1010261
328 Ga0209974_10014538
329 Ga0268264_10011521
330 Ga0307408_100008720
331 Ga0307408_100036162
332 Ga0307408_100128711
333 Ga0316575_10001358
334 Ga0316576_10125459
335 Ga0316578_10003404
336 Ga0307405_10000218
337 Ga0307405_10014861
338 Ga0307413_10036176
339 Ga0307413_10061401
340 Ga0307410_10000914
341 Ga0307410_10001373
342 Ga0307410_10002272
343 Ga0307410_10013518
344 Ga0307410_10038663
345 Ga0307406_10005963
346 Ga0307406_10027299
347 Ga0307406_10029259
348 Ga0307407_10000760
349 Ga0307407_10085729
350 Ga0307412_10041762
351 Ga0307412_10055323
352 Ga0307409_100001843
353 Ga0307409_100010468
354 Ga0307409_100035507
355 Ga0307409_100040479
356 Ga0307416_100000572
357 Ga0307416_100003700
358 Ga0307416_100022332
359 Ga0307416_100045466
360 Ga0307416_100082025
361 Ga0307416_100337749
362 Ga0307414_10009437
363 Ga0307414_10017236
364 Ga0307414_10028516
365 Ga0307414_10080556
366 Ga0307414_10129179
367 Ga0307414_10177569
368 Ga0307414_10177611
369 Ga0307411_10000364
370 Ga0307411_10010250
371 Ga0307411_10049359
372 Ga0307411_10104651
373 Ga0307415_100008520
374 Ga0307415_100018491
375 Ga0242420_010550
376 Ga0439439_0001298
377 Ga0451577_0042336
378 Ga0453683_0050360
379 Ga0453683_0138514
380 Ga0453684_0058231
381 Ga0451576_0020947
382 Ga0495603_0005284
383 Ga0495664_0010673
384 Ga0495594_0000990
385 Ga0495640_0051775
386 Ga0495586_0001882
387 Ga0495634_0002653
388 Ga0495674_0003864
389 Ga0496100_0180817
390 Ga0496104_0018713
391 Ga0496104_0165246
392 Ga0496106_0006718
393 Ga0496106_0127890
394 Ga0496107_0163137
395 Ga0496108_0002642
396 Ga0496108_0026951
397 Ga0496109_0014730
398 Ga0496109_0016782
399 Ga0496109_0020966
400 Ga0496110_0020244
401 Ga0496110_0056661
402 Ga0496110_0135716
403 Ga0496111_0000989
404 Ga0496111_0061343
405 Ga0496111_0125251
406 Ga0496112_0009314
407 Ga0496112_0015928
408 Ga0496112_0025561
409 Ga0496113_0000737
410 Ga0496114_0024277
411 Ga0501292_007382
412 Ga0501036_0072099
413 Ga0501040_0123043
414 Ga0501041_0032594
415 Ga0501042_0024651
416 Ga0501042_0031869
417 Ga0501048_0016773
418 Ga0501048_0089387
419 Ga0501067_0002587
420 Ga0501069_0024364
421 Ga0501070_0220036
422 Ga0501071_0000917
423 Ga0501071_0148620
424 Ga0501073_0003139
425 Ga0501074_0003370
426 Ga0501076_0006144
427 Ga0501076_0013971
428 Ga0501076_0078290
429 Ga0501077_0000669
430 Ga0501077_0007208
431 Ga0501209_005872
432 Ga0501235_007553
433 Ga0501247_001448
434 Ga0501249_016221
435 Ga0501256_002739
436 Ga0501079_0005272
437 Ga0501079_0088158
438 Ga0501079_0109998
439 Ga0501080_0017347
440 Ga0501081_0019357
441 Ga0501083_0097203
442 Ga0501263_000543
443 Ga0501267_000158
444 Ga0501268_000659
445 Ga0501272_000360
446 Ga0501045_0030309
447 nmdc:mga05p37_114794_c1
448 nmdc:mga05p37_246976_c1
449 nmdc:mga05p37_98280_c1
450 nmdc:mga09592_2623_c1
451 nmdc:mga09592_33567_c1
452 nmdc:mga06r32_65326_c1
453 nmdc:mga0n895_103309_c1
454 nmdc:mga0n895_21028_c1
455 nmdc:mga0rr50_245302_c1
456 Ga0501084_0008141
457 Ga0501084_0041459
458 Ga0590071_001041
459 Ga0590077_006618
460 Ga0501082_0025645
461 Ga0501082_0036448
462 Ga0501082_0042108
463 Ga0501082_0138019
464 Ga0530510_0135307

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

7

439

0.98

PF17820

PDZ_6

PDZ domain

227

280

0.95

PF00595

PDZ

PDZ domain

211

279

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p3w-assembly1.cif.gz_A-2 crystal structure of the htra3 pdz domain bound to a phage-derived ligand (fgrwv) 0.9273 227 290
7xft-assembly1.cif.gz_A-2 mucp pdz2 domain 0.9264 223 312
2p3w-assembly2.cif.gz_B-3 crystal structure of the htra3 pdz domain bound to a phage-derived ligand (fgrwv) 0.9195 229 290
5wyn-assembly1.cif.gz_A htra2 pathogenic mutant 0.9178 227 290
5tnz-assembly1.cif.gz_A htra2 s142d mutant 0.9117 227 290
ID Description Score Start End Superfamily
af_A0A1D6FKP2_357_461_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9302 227 289 2.30.42.10
af_Q9VFJ3_320_421_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9301 227 290 2.30.42.10
af_A0A1D8PCD2_285_377_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9248 225 289 2.30.42.10
af_A0A0P0VNU6_285_398_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.92 227 289 2.30.42.10
2p3wB01 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9195 229 290 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A6L8F6F5-F1-model_v4 deleted 0.8982 5 124
AF-A0A3D3PRB1-F1-model_v4 RIP metalloprotease RseP 0.8857 4 122 GO:0004222
GO:0006508
GO:0016020
AF-F0GIN3-F1-model_v4 Membrane-associated zinc metalloprotease 0.8846 1 126 GO:0004222
GO:0006508
GO:0016020
AF-A0A1G2U5X2-F1-model_v4 Peptidase M50 domain-containing protein 0.8809 4 445 GO:0004222
GO:0006508
GO:0016020
AF-A0A0S8J362-F1-model_v4 Zinc metalloprotease (EC 3.4.24.-) 0.8732 3 446 GO:0004222
GO:0006508
GO:0016020
GO:0046872

Map