F345197
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 232 | 142 | 464 | 459 |
Family's Representative Sequence
| Representative Sequence | 3300031250|Ga0265331_10001169|Ga0265331_100011691 |
| Length | 495 |
| Sequence | MKLTIQKPDIVALGNAARTLTLGRPMLGSRQPRNRTHRRRHKVRPTTLARKLYVKTYGCQMNVYDSARMADVLAPLGYAAADGPEDADMVILNTCHIREKAAEKVFSELGRLKTLKRRRESAGGRMILAVAGCVAQAEGAEILRRAPYVDIVLGPQTYHRLPEMVAQAARAGGAVLDTDFPAEPKFDFLPEPHAEGASAFLSVQEGCDKFCTFCVVPYTRGGEYSRPAAALLAEAKGLAAQGVVEITLLGQNVNAWHGQAADAPKREWNLARLIRALAEIDGLRRIRYVTSHPCDMDDDLIAAHRDVGALMPFLHLPVQAGSDRVLDAMNRRHDRAFYLGLVERLKAARPDLALSSDFIVGFPGESDDDFRQTLALVRAVGFVQTYSFKYSPRPGTPAAGLPQVPEAVKEERLAELQALLGGLTADFNRAAIGRVMPVLLDRPGRHPGQLVGRSPYMQPVHVEGAAPWMGRVVDLRITAAHPNSLAGELTGERAP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 4 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 21 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 22 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 23 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 24 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 25 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 26 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 27 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 28 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 29 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 31 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 42 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 43 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 46 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 62 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 65 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 66 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 67 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 68 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 69 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 70 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 71 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 72 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 73 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 74 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 75 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 76 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 77 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 78 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 79 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 80 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 81 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 82 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 83 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 84 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 85 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 86 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 87 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 88 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 101 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 127 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 128 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 129 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 130 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 131 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 132 | 3300053731 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere | Metagenome | Endosphere |
| 133 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 136 | 2842775625 | Roseomonas sp. R-71825 | Isolate | Unclassified |
| 137 | 2883577096 | Roseococcus sp. SYP-B2431 | Isolate | Rhizosphere |
| 138 | 2894772417 | Roseomonas oryzicola KCTC 22478 | Isolate | Rhizosphere |
| 139 | 2929199973 | Roseomonas sp. R-73070 Hybrid assembly | Isolate | Unclassified |
| 140 | 641228493 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 141 | 643348555 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 142 | 8055909800 | Plastoroseomonas hellenica LMG 31523 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.98 |
| Metatranscriptomes | 0 |
| Isolates | 3.02 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.47 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 85.78 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0265331_10001169 | 3300031250 | Bacteria | 20012 |
| 2 | JGI25406J46586_10000173 | 3300003203 | Bacteria | 28945 |
| 3 | JGI25153J46596_10001034 | 3300003215 | Bacteria | 16960 |
| 4 | Ga0065712_10079297 | 3300005290 | Bacteria | 3235 |
| 5 | Ga0070680_100022193 | 3300005336 | Bacteria | 5051 |
| 6 | Ga0068868_100013176 | 3300005338 | Bacteria | 6057 |
| 7 | Ga0070660_100015879 | 3300005339 | Bacteria | 5451 |
| 8 | Ga0070669_100024847 | 3300005353 | Bacteria | 4300 |
| 9 | Ga0070659_100026206 | 3300005366 | Bacteria | 4484 |
| 10 | Ga0070714_100012201 | 3300005435 | Bacteria | 6852 |
| 11 | Ga0070713_100082629 | 3300005436 | Bacteria | 2744 |
| 12 | Ga0070713_100136524 | 3300005436 | Bacteria | 2168 |
| 13 | Ga0070710_10054828 | 3300005437 | Bacteria | 2250 |
| 14 | Ga0070700_100064198 | 3300005441 | Bacteria | 2325 |
| 15 | Ga0070678_100026723 | 3300005456 | Bacteria | 3908 |
| 16 | Ga0070681_10041236 | 3300005458 | Bacteria | 4625 |
| 17 | Ga0070681_10073142 | 3300005458 | Bacteria | 3390 |
| 18 | Ga0068867_100085241 | 3300005459 | Bacteria | 2388 |
| 19 | Ga0070679_100155786 | 3300005530 | Bacteria | 2259 |
| 20 | Ga0070704_100047856 | 3300005549 | Bacteria | 2991 |
| 21 | Ga0070664_100132571 | 3300005564 | Bacteria | 2189 |
| 22 | Ga0068857_100055972 | 3300005577 | Bacteria | 3499 |
| 23 | Ga0068864_100065219 | 3300005618 | Bacteria | 3159 |
| 24 | Ga0068864_100167165 | 3300005618 | Bacteria | 2003 |
| 25 | Ga0068861_100011166 | 3300005719 | Bacteria | 6236 |
| 26 | Ga0068858_100062921 | 3300005842 | Bacteria | 3432 |
| 27 | Ga0068858_100130527 | 3300005842 | Bacteria | 2356 |
| 28 | Ga0068860_100126882 | 3300005843 | Bacteria | 2446 |
| 29 | Ga0068862_100042123 | 3300005844 | Bacteria | 3888 |
| 30 | Ga0081455_10000431 | 3300005937 | Bacteria | 55069 |
| 31 | Ga0081455_10025137 | 3300005937 | Bacteria | 5501 |
| 32 | Ga0081538_10004799 | 3300005981 | Bacteria | 12339 |
| 33 | Ga0081539_10000101 | 3300005985 | Bacteria | 198612 |
| 34 | Ga0097621_100150096 | 3300006237 | Bacteria | 1998 |
| 35 | Ga0068871_100006263 | 3300006358 | Bacteria | 8394 |
| 36 | Ga0105240_10267527 | 3300009093 | Bacteria | 1970 |
| 37 | Ga0105240_10284631 | 3300009093 | Bacteria | 1898 |
| 38 | Ga0105248_10005874 | 3300009177 | Bacteria | 13490 |
| 39 | Ga0105239_10214694 | 3300010375 | Bacteria | 2156 |
| 40 | Ga0157373_10021163 | 3300013100 | Bacteria | 4721 |
| 41 | Ga0157374_10079733 | 3300013296 | Bacteria | 3103 |
| 42 | Ga0157378_10001421 | 3300013297 | Bacteria | 21532 |
| 43 | Ga0163162_10010770 | 3300013306 | Bacteria | 8896 |
| 44 | Ga0163163_10009021 | 3300014325 | Bacteria | 8886 |
| 45 | Ga0163163_10018258 | 3300014325 | Bacteria | 6562 |
| 46 | Ga0163163_10043458 | 3300014325 | Bacteria | 4406 |
| 47 | Ga0163163_10073846 | 3300014325 | Bacteria | 3402 |
| 48 | Ga0163163_10203929 | 3300014325 | Bacteria | 2026 |
| 49 | Ga0157379_10128584 | 3300014968 | Bacteria | 2280 |
| 50 | Ga0157376_10023169 | 3300014969 | Bacteria | 4855 |
| 51 | Ga0157376_10108086 | 3300014969 | Bacteria | 2443 |
| 52 | Ga0213872_10000750 | 3300021361 | Bacteria | 23990 |
| 53 | Ga0213872_10001629 | 3300021361 | Bacteria | 14212 |
| 54 | Ga0213872_10001998 | 3300021361 | Bacteria | 12420 |
| 55 | Ga0213872_10011594 | 3300021361 | Bacteria | 4167 |
| 56 | Ga0213872_10027529 | 3300021361 | Bacteria | 2609 |
| 57 | Ga0213875_10003841 | 3300021388 | Bacteria | 8433 |
| 58 | Ga0213875_10004367 | 3300021388 | Bacteria | 7782 |
| 59 | Ga0213875_10007531 | 3300021388 | Bacteria | 5613 |
| 60 | Ga0209148_1001284 | 3300025254 | Bacteria | 13685 |
| 61 | Ga0209455_1001764 | 3300025272 | Bacteria | 9172 |
| 62 | Ga0209675_1001163 | 3300025291 | Bacteria | 15970 |
| 63 | Ga0209758_1000202 | 3300025297 | Bacteria | 132401 |
| 64 | Ga0209050_1009173 | 3300025298 | Bacteria | 5114 |
| 65 | Ga0209257_1001727 | 3300025304 | Bacteria | 24343 |
| 66 | Ga0207707_10076255 | 3300025912 | Bacteria | 2926 |
| 67 | Ga0207707_10093363 | 3300025912 | Bacteria | 2628 |
| 68 | Ga0207695_10245318 | 3300025913 | Bacteria | 1691 |
| 69 | Ga0207650_10172360 | 3300025925 | Bacteria | 1720 |
| 70 | Ga0207700_10042973 | 3300025928 | Bacteria | 3317 |
| 71 | Ga0207700_10114310 | 3300025928 | Bacteria | 2178 |
| 72 | Ga0207644_10085944 | 3300025931 | Bacteria | 2334 |
| 73 | Ga0207690_10048828 | 3300025932 | Bacteria | 2817 |
| 74 | Ga0207689_10009911 | 3300025942 | Bacteria | 8215 |
| 75 | Ga0207679_10097922 | 3300025945 | Bacteria | 2286 |
| 76 | Ga0207703_10010674 | 3300026035 | Bacteria | 7174 |
| 77 | Ga0207703_10165157 | 3300026035 | Bacteria | 1942 |
| 78 | Ga0207674_10002025 | 3300026116 | Bacteria | 25725 |
| 79 | Ga0207675_100016756 | 3300026118 | Bacteria | 6843 |
| 80 | Ga0207683_10076089 | 3300026121 | Bacteria | 2972 |
| 81 | Ga0207428_10000053 | 3300027907 | Bacteria | 175238 |
| 82 | Ga0268266_10043115 | 3300028379 | Bacteria | 3855 |
| 83 | Ga0268265_10019810 | 3300028380 | Bacteria | 4684 |
| 84 | Ga0268265_10036040 | 3300028380 | Bacteria | 3620 |
| 85 | Ga0265320_10001776 | 3300031240 | Bacteria | 15278 |
| 86 | Ga0265331_10015980 | 3300031250 | Bacteria | 3949 |
| 87 | Ga0265327_10000070 | 3300031251 | Bacteria | 217350 |
| 88 | Ga0265327_10000129 | 3300031251 | Bacteria | 165504 |
| 89 | Ga0265327_10005733 | 3300031251 | Bacteria | 10234 |
| 90 | Ga0265313_10000272 | 3300031595 | Bacteria | 56354 |
| 91 | Ga0265313_10001449 | 3300031595 | Bacteria | 22152 |
| 92 | Ga0265313_10004334 | 3300031595 | Bacteria | 10976 |
| 93 | Ga0265314_10008012 | 3300031711 | Bacteria | 9109 |
| 94 | Ga0265314_10016252 | 3300031711 | Bacteria | 5888 |
| 95 | Ga0265314_10034700 | 3300031711 | Bacteria | 3682 |
| 96 | Ga0265342_10014681 | 3300031712 | Bacteria | 5190 |
| 97 | Ga0307411_10003746 | 3300032005 | Bacteria | 7132 |
| 98 | Ga0307510_10184079 | 3300033180 | Bacteria | 1647 |
| 99 | Ga0373936_0021569 | 3300035113 | Bacteria | 2505 |
| 100 | Ga0373957_0008587 | 3300035120 | Bacteria | 3317 |
| 101 | Ga0373955_0006050 | 3300035172 | Bacteria | 5493 |
| 102 | Ga0373927_0062932 | 3300035695 | Bacteria | 2399 |
| 103 | Ga0373933_0009739 | 3300035724 | Bacteria | 5258 |
| 104 | Ga0373947_0082686 | 3300035725 | Bacteria | 1990 |
| 105 | Ga0373947_0113608 | 3300035725 | Bacteria | 1714 |
| 106 | Ga0373937_0004347 | 3300036401 | Bacteria | 12023 |
| 107 | Ga0373937_0015674 | 3300036401 | Bacteria | 6710 |
| 108 | Ga0373937_0034328 | 3300036401 | Bacteria | 4614 |
| 109 | Ga0373937_0081463 | 3300036401 | Bacteria | 2994 |
| 110 | Ga0373937_0091719 | 3300036401 | Bacteria | 2815 |
| 111 | Ga0373937_0252605 | 3300036401 | Bacteria | 1662 |
| 112 | Ga0373937_0345687 | 3300036401 | Bacteria | 1409 |
| 113 | Ga0373925_0148712 | 3300037068 | Bacteria | 1837 |
| 114 | Ga0436364_0054114 | 3300037853 | Bacteria | 12266 |
| 115 | Ga0436364_0269463 | 3300037853 | Bacteria | 6992 |
| 116 | Ga0436364_0376257 | 3300037853 | Bacteria | 14994 |
| 117 | Ga0436364_0466953 | 3300037853 | Bacteria | 7067 |
| 118 | Ga0436364_0581246 | 3300037853 | Bacteria | 34922 |
| 119 | Ga0436364_1501061 | 3300037853 | Bacteria | 1796 |
| 120 | Ga0436364_1503427 | 3300037853 | Bacteria | 2422 |
| 121 | Ga0436364_1538652 | 3300037853 | Bacteria | 2929 |
| 122 | Ga0395901_0098614 | 3300038443 | Bacteria | 3064 |
| 123 | Ga0436360_0709919 | 3300039438 | Bacteria | 1868 |
| 124 | Ga0436360_0776207 | 3300039438 | Bacteria | 1604 |
| 125 | Ga0436361_0144176 | 3300039447 | Bacteria | 1952 |
| 126 | Ga0436361_0157428 | 3300039447 | Bacteria | 8153 |
| 127 | Ga0436361_0211220 | 3300039447 | Bacteria | 46566 |
| 128 | Ga0436361_0363853 | 3300039447 | Bacteria | 2869 |
| 129 | Ga0436361_0483453 | 3300039447 | Bacteria | 6802 |
| 130 | Ga0436361_0559201 | 3300039447 | Bacteria | 1842 |
| 131 | Ga0436361_0792823 | 3300039447 | Bacteria | 4203 |
| 132 | Ga0436361_0882838 | 3300039447 | Bacteria | 25023 |
| 133 | Ga0436361_1200636 | 3300039447 | Bacteria | 8020 |
| 134 | Ga0451577_0012555 | 3300042876 | Bacteria | 7954 |
| 135 | Ga0451577_0040499 | 3300042876 | Bacteria | 4183 |
| 136 | Ga0453683_0010726 | 3300044673 | Bacteria | 6066 |
| 137 | Ga0453683_0074582 | 3300044673 | Bacteria | 2124 |
| 138 | Ga0453684_0000015 | 3300044712 | Bacteria | 969198 |
| 139 | Ga0453684_0000020 | 3300044712 | Bacteria | 879938 |
| 140 | Ga0453684_0128017 | 3300044712 | Bacteria | 3052 |
| 141 | Ga0451576_0000056 | 3300045051 | Bacteria | 303398 |
| 142 | Ga0451576_0002896 | 3300045051 | Bacteria | 24478 |
| 143 | Ga0451576_0006420 | 3300045051 | Bacteria | 14422 |
| 144 | Ga0451576_0017764 | 3300045051 | Bacteria | 7816 |
| 145 | Ga0466958_0000931 | 3300045836 | Bacteria | 13192 |
| 146 | Ga0495592_0091067 | 3300046454 | Bacteria | 2187 |
| 147 | Ga0495664_0011847 | 3300046477 | Bacteria | 4925 |
| 148 | Ga0495608_0013491 | 3300046511 | Bacteria | 5667 |
| 149 | Ga0495608_0090663 | 3300046511 | Bacteria | 1977 |
| 150 | Ga0495628_0063973 | 3300046516 | Bacteria | 2881 |
| 151 | Ga0495652_0081599 | 3300046529 | Bacteria | 2667 |
| 152 | Ga0495587_0022341 | 3300046536 | Bacteria | 3895 |
| 153 | Ga0495645_0010470 | 3300046543 | Bacteria | 6502 |
| 154 | Ga0495625_0077315 | 3300046660 | Bacteria | 2326 |
| 155 | Ga0495646_0012606 | 3300046680 | Bacteria | 5373 |
| 156 | Ga0495658_0000382 | 3300046683 | Bacteria | 24861 |
| 157 | Ga0495674_0139631 | 3300047319 | Bacteria | 2037 |
| 158 | Ga0495602_0000841 | 3300048088 | Bacteria | 29570 |
| 159 | Ga0496119_0014505 | 3300048922 | Bacteria | 6159 |
| 160 | Ga0501031_0021292 | 3300049568 | Bacteria | 4227 |
| 161 | Ga0501032_0001653 | 3300049569 | Bacteria | 17694 |
| 162 | Ga0501032_0024282 | 3300049569 | Bacteria | 4187 |
| 163 | Ga0501034_0002005 | 3300049571 | Bacteria | 25731 |
| 164 | Ga0501034_0053349 | 3300049571 | Bacteria | 4071 |
| 165 | Ga0501034_0105923 | 3300049571 | Bacteria | 2804 |
| 166 | Ga0501036_0002375 | 3300049572 | Bacteria | 14720 |
| 167 | Ga0501036_0058674 | 3300049572 | Bacteria | 3261 |
| 168 | Ga0501037_0013328 | 3300049573 | Bacteria | 6058 |
| 169 | Ga0501037_0048281 | 3300049573 | Bacteria | 3120 |
| 170 | Ga0501037_0060013 | 3300049573 | Bacteria | 2774 |
| 171 | Ga0501039_0020719 | 3300049575 | Bacteria | 5038 |
| 172 | Ga0501043_0008494 | 3300049579 | Bacteria | 8082 |
| 173 | Ga0501046_0004518 | 3300049580 | Bacteria | 12608 |
| 174 | Ga0501046_0084528 | 3300049580 | Bacteria | 2447 |
| 175 | Ga0501047_0005997 | 3300049581 | Bacteria | 11418 |
| 176 | Ga0501047_0101030 | 3300049581 | Bacteria | 2764 |
| 177 | Ga0501047_0235174 | 3300049581 | Bacteria | 1684 |
| 178 | Ga0501048_0031344 | 3300049582 | Bacteria | 3846 |
| 179 | Ga0501048_0143563 | 3300049582 | Bacteria | 1688 |
| 180 | Ga0501067_0007657 | 3300049583 | Bacteria | 6003 |
| 181 | Ga0501069_0000092 | 3300049585 | Bacteria | 43169 |
| 182 | Ga0501069_0025664 | 3300049585 | Bacteria | 3223 |
| 183 | Ga0501070_0007304 | 3300049586 | Bacteria | 9383 |
| 184 | Ga0501070_0020691 | 3300049586 | Bacteria | 5520 |
| 185 | Ga0501070_0076087 | 3300049586 | Bacteria | 2779 |
| 186 | Ga0501073_0001967 | 3300049589 | Bacteria | 15332 |
| 187 | Ga0501073_0012661 | 3300049589 | Bacteria | 6151 |
| 188 | Ga0501073_0072455 | 3300049589 | Bacteria | 2399 |
| 189 | Ga0501074_0001787 | 3300049590 | Bacteria | 14703 |
| 190 | Ga0501080_0000661 | 3300049742 | Bacteria | 27368 |
| 191 | Ga0501080_0004978 | 3300049742 | Bacteria | 11830 |
| 192 | Ga0501080_0103415 | 3300049742 | Bacteria | 2641 |
| 193 | Ga0501081_0109147 | 3300049743 | Bacteria | 1963 |
| 194 | Ga0501083_0015586 | 3300049744 | Bacteria | 5322 |
| 195 | Ga0501035_0001250 | 3300049822 | Bacteria | 26412 |
| 196 | Ga0501035_0010429 | 3300049822 | Bacteria | 8612 |
| 197 | Ga0501035_0070349 | 3300049822 | Bacteria | 3100 |
| 198 | Ga0501044_0003427 | 3300049823 | Bacteria | 17872 |
| 199 | Ga0501044_0008944 | 3300049823 | Bacteria | 10946 |
| 200 | Ga0501044_0024128 | 3300049823 | Bacteria | 6461 |
| 201 | Ga0501044_0077522 | 3300049823 | Bacteria | 3371 |
| 202 | Ga0501044_0128469 | 3300049823 | Bacteria | 2530 |
| 203 | Ga0501044_0132669 | 3300049823 | Bacteria | 2484 |
| 204 | Ga0501044_0221386 | 3300049823 | Bacteria | 1843 |
| 205 | nmdc:mga06r32_231620_c1 | 3300050510 | Bacteria | 1835 |
| 206 | nmdc:mga08y16_246651_c1 | 3300050511 | Bacteria | 1845 |
| 207 | nmdc:mga08y16_30_c1 | 3300050511 | Bacteria | 197110 |
| 208 | Ga0495601_0028440 | 3300053077 | Bacteria | 3462 |
| 209 | Ga0495612_0001688 | 3300053078 | Bacteria | 9082 |
| 210 | Ga0495619_0033772 | 3300053085 | Bacteria | 3323 |
| 211 | Ga0500643_030410 | 3300053087 | Bacteria | 1654 |
| 212 | Ga0500651_0001450 | 3300053093 | Bacteria | 11933 |
| 213 | Ga0500641_0000078 | 3300053096 | Bacteria | 39918 |
| 214 | Ga0500595_000050 | 3300053119 | Bacteria | 88696 |
| 215 | Ga0500595_004912 | 3300053119 | Bacteria | 5913 |
| 216 | Ga0500588_0000457 | 3300053146 | Bacteria | 6460 |
| 217 | Ga0500616_0000904 | 3300053153 | Bacteria | 32548 |
| 218 | Ga0500609_000043 | 3300053731 | Bacteria | 16927 |
| 219 | Ga0501084_0011791 | 3300054114 | Bacteria | 7235 |
| 220 | Ga0501084_0081821 | 3300054114 | Bacteria | 2709 |
| 221 | Ga0501082_0005480 | 3300060353 | Bacteria | 11017 |
| 222 | Ga0501082_0007930 | 3300060353 | Bacteria | 9173 |
| 223 | Ga0501082_0007976 | 3300060353 | Bacteria | 9142 |
| 224 | Ga0501082_0094095 | 3300060353 | Bacteria | 2589 |
| 225 | Ga0530510_0014020 | 3300061734 | Bacteria | 5650 |
| 226 | 2842779215 | 2842775625 | Bacteria | 5587290 |
| 227 | 2883578797 | 2883577096 | Bacteria | 4709178 |
| 228 | 2894774753 | 2894772417 | Bacteria | 5305674 |
| 229 | 2929205836 | 2929199973 | Bacteria | 7260745 |
| 230 | 641335789 | 641228493 | Bacteria | 3999591 |
| 231 | 643389603 | 643348555 | Bacteria | 3914947 |
| 232 | 8055916507 | 8055909800 | Bacteria | 7278581 |
| 233 | Ga0265331_10001169 | |||
| 234 | JGI25406J46586_10000173 | |||
| 235 | JGI25153J46596_10001034 | |||
| 236 | Ga0065712_10079297 | |||
| 237 | Ga0070680_100022193 | |||
| 238 | Ga0068868_100013176 | |||
| 239 | Ga0070660_100015879 | |||
| 240 | Ga0070669_100024847 | |||
| 241 | Ga0070659_100026206 | |||
| 242 | Ga0070714_100012201 | |||
| 243 | Ga0070713_100082629 | |||
| 244 | Ga0070713_100136524 | |||
| 245 | Ga0070710_10054828 | |||
| 246 | Ga0070700_100064198 | |||
| 247 | Ga0070678_100026723 | |||
| 248 | Ga0070681_10041236 | |||
| 249 | Ga0070681_10073142 | |||
| 250 | Ga0068867_100085241 | |||
| 251 | Ga0070679_100155786 | |||
| 252 | Ga0070704_100047856 | |||
| 253 | Ga0070664_100132571 | |||
| 254 | Ga0068857_100055972 | |||
| 255 | Ga0068864_100065219 | |||
| 256 | Ga0068864_100167165 | |||
| 257 | Ga0068861_100011166 | |||
| 258 | Ga0068858_100062921 | |||
| 259 | Ga0068858_100130527 | |||
| 260 | Ga0068860_100126882 | |||
| 261 | Ga0068862_100042123 | |||
| 262 | Ga0081455_10000431 | |||
| 263 | Ga0081455_10025137 | |||
| 264 | Ga0081538_10004799 | |||
| 265 | Ga0081539_10000101 | |||
| 266 | Ga0097621_100150096 | |||
| 267 | Ga0068871_100006263 | |||
| 268 | Ga0105240_10267527 | |||
| 269 | Ga0105240_10284631 | |||
| 270 | Ga0105248_10005874 | |||
| 271 | Ga0105239_10214694 | |||
| 272 | Ga0157373_10021163 | |||
| 273 | Ga0157374_10079733 | |||
| 274 | Ga0157378_10001421 | |||
| 275 | Ga0163162_10010770 | |||
| 276 | Ga0163163_10009021 | |||
| 277 | Ga0163163_10018258 | |||
| 278 | Ga0163163_10043458 | |||
| 279 | Ga0163163_10073846 | |||
| 280 | Ga0163163_10203929 | |||
| 281 | Ga0157379_10128584 | |||
| 282 | Ga0157376_10023169 | |||
| 283 | Ga0157376_10108086 | |||
| 284 | Ga0213872_10000750 | |||
| 285 | Ga0213872_10001629 | |||
| 286 | Ga0213872_10001998 | |||
| 287 | Ga0213872_10011594 | |||
| 288 | Ga0213872_10027529 | |||
| 289 | Ga0213875_10003841 | |||
| 290 | Ga0213875_10004367 | |||
| 291 | Ga0213875_10007531 | |||
| 292 | Ga0209148_1001284 | |||
| 293 | Ga0209455_1001764 | |||
| 294 | Ga0209675_1001163 | |||
| 295 | Ga0209758_1000202 | |||
| 296 | Ga0209050_1009173 | |||
| 297 | Ga0209257_1001727 | |||
| 298 | Ga0207707_10076255 | |||
| 299 | Ga0207707_10093363 | |||
| 300 | Ga0207695_10245318 | |||
| 301 | Ga0207650_10172360 | |||
| 302 | Ga0207700_10042973 | |||
| 303 | Ga0207700_10114310 | |||
| 304 | Ga0207644_10085944 | |||
| 305 | Ga0207690_10048828 | |||
| 306 | Ga0207689_10009911 | |||
| 307 | Ga0207679_10097922 | |||
| 308 | Ga0207703_10010674 | |||
| 309 | Ga0207703_10165157 | |||
| 310 | Ga0207674_10002025 | |||
| 311 | Ga0207675_100016756 | |||
| 312 | Ga0207683_10076089 | |||
| 313 | Ga0207428_10000053 | |||
| 314 | Ga0268266_10043115 | |||
| 315 | Ga0268265_10019810 | |||
| 316 | Ga0268265_10036040 | |||
| 317 | Ga0265320_10001776 | |||
| 318 | Ga0265331_10015980 | |||
| 319 | Ga0265327_10000070 | |||
| 320 | Ga0265327_10000129 | |||
| 321 | Ga0265327_10005733 | |||
| 322 | Ga0265313_10000272 | |||
| 323 | Ga0265313_10001449 | |||
| 324 | Ga0265313_10004334 | |||
| 325 | Ga0265314_10008012 | |||
| 326 | Ga0265314_10016252 | |||
| 327 | Ga0265314_10034700 | |||
| 328 | Ga0265342_10014681 | |||
| 329 | Ga0307411_10003746 | |||
| 330 | Ga0307510_10184079 | |||
| 331 | Ga0373936_0021569 | |||
| 332 | Ga0373957_0008587 | |||
| 333 | Ga0373955_0006050 | |||
| 334 | Ga0373927_0062932 | |||
| 335 | Ga0373933_0009739 | |||
| 336 | Ga0373947_0082686 | |||
| 337 | Ga0373947_0113608 | |||
| 338 | Ga0373937_0004347 | |||
| 339 | Ga0373937_0015674 | |||
| 340 | Ga0373937_0034328 | |||
| 341 | Ga0373937_0081463 | |||
| 342 | Ga0373937_0091719 | |||
| 343 | Ga0373937_0252605 | |||
| 344 | Ga0373937_0345687 | |||
| 345 | Ga0373925_0148712 | |||
| 346 | Ga0436364_0054114 | |||
| 347 | Ga0436364_0269463 | |||
| 348 | Ga0436364_0376257 | |||
| 349 | Ga0436364_0466953 | |||
| 350 | Ga0436364_0581246 | |||
| 351 | Ga0436364_1501061 | |||
| 352 | Ga0436364_1503427 | |||
| 353 | Ga0436364_1538652 | |||
| 354 | Ga0395901_0098614 | |||
| 355 | Ga0436360_0709919 | |||
| 356 | Ga0436360_0776207 | |||
| 357 | Ga0436361_0144176 | |||
| 358 | Ga0436361_0157428 | |||
| 359 | Ga0436361_0211220 | |||
| 360 | Ga0436361_0363853 | |||
| 361 | Ga0436361_0483453 | |||
| 362 | Ga0436361_0559201 | |||
| 363 | Ga0436361_0792823 | |||
| 364 | Ga0436361_0882838 | |||
| 365 | Ga0436361_1200636 | |||
| 366 | Ga0451577_0012555 | |||
| 367 | Ga0451577_0040499 | |||
| 368 | Ga0453683_0010726 | |||
| 369 | Ga0453683_0074582 | |||
| 370 | Ga0453684_0000015 | |||
| 371 | Ga0453684_0000020 | |||
| 372 | Ga0453684_0128017 | |||
| 373 | Ga0451576_0000056 | |||
| 374 | Ga0451576_0002896 | |||
| 375 | Ga0451576_0006420 | |||
| 376 | Ga0451576_0017764 | |||
| 377 | Ga0466958_0000931 | |||
| 378 | Ga0495592_0091067 | |||
| 379 | Ga0495664_0011847 | |||
| 380 | Ga0495608_0013491 | |||
| 381 | Ga0495608_0090663 | |||
| 382 | Ga0495628_0063973 | |||
| 383 | Ga0495652_0081599 | |||
| 384 | Ga0495587_0022341 | |||
| 385 | Ga0495645_0010470 | |||
| 386 | Ga0495625_0077315 | |||
| 387 | Ga0495646_0012606 | |||
| 388 | Ga0495658_0000382 | |||
| 389 | Ga0495674_0139631 | |||
| 390 | Ga0495602_0000841 | |||
| 391 | Ga0496119_0014505 | |||
| 392 | Ga0501031_0021292 | |||
| 393 | Ga0501032_0001653 | |||
| 394 | Ga0501032_0024282 | |||
| 395 | Ga0501034_0002005 | |||
| 396 | Ga0501034_0053349 | |||
| 397 | Ga0501034_0105923 | |||
| 398 | Ga0501036_0002375 | |||
| 399 | Ga0501036_0058674 | |||
| 400 | Ga0501037_0013328 | |||
| 401 | Ga0501037_0048281 | |||
| 402 | Ga0501037_0060013 | |||
| 403 | Ga0501039_0020719 | |||
| 404 | Ga0501043_0008494 | |||
| 405 | Ga0501046_0004518 | |||
| 406 | Ga0501046_0084528 | |||
| 407 | Ga0501047_0005997 | |||
| 408 | Ga0501047_0101030 | |||
| 409 | Ga0501047_0235174 | |||
| 410 | Ga0501048_0031344 | |||
| 411 | Ga0501048_0143563 | |||
| 412 | Ga0501067_0007657 | |||
| 413 | Ga0501069_0000092 | |||
| 414 | Ga0501069_0025664 | |||
| 415 | Ga0501070_0007304 | |||
| 416 | Ga0501070_0020691 | |||
| 417 | Ga0501070_0076087 | |||
| 418 | Ga0501073_0001967 | |||
| 419 | Ga0501073_0012661 | |||
| 420 | Ga0501073_0072455 | |||
| 421 | Ga0501074_0001787 | |||
| 422 | Ga0501080_0000661 | |||
| 423 | Ga0501080_0004978 | |||
| 424 | Ga0501080_0103415 | |||
| 425 | Ga0501081_0109147 | |||
| 426 | Ga0501083_0015586 | |||
| 427 | Ga0501035_0001250 | |||
| 428 | Ga0501035_0010429 | |||
| 429 | Ga0501035_0070349 | |||
| 430 | Ga0501044_0003427 | |||
| 431 | Ga0501044_0008944 | |||
| 432 | Ga0501044_0024128 | |||
| 433 | Ga0501044_0077522 | |||
| 434 | Ga0501044_0128469 | |||
| 435 | Ga0501044_0132669 | |||
| 436 | Ga0501044_0221386 | |||
| 437 | nmdc:mga06r32_231620_c1 | |||
| 438 | nmdc:mga08y16_246651_c1 | |||
| 439 | nmdc:mga08y16_30_c1 | |||
| 440 | Ga0495601_0028440 | |||
| 441 | Ga0495612_0001688 | |||
| 442 | Ga0495619_0033772 | |||
| 443 | Ga0500643_030410 | |||
| 444 | Ga0500651_0001450 | |||
| 445 | Ga0500641_0000078 | |||
| 446 | Ga0500595_000050 | |||
| 447 | Ga0500595_004912 | |||
| 448 | Ga0500588_0000457 | |||
| 449 | Ga0500616_0000904 | |||
| 450 | Ga0500609_000043 | |||
| 451 | Ga0501084_0011791 | |||
| 452 | Ga0501084_0081821 | |||
| 453 | Ga0501082_0005480 | |||
| 454 | Ga0501082_0007930 | |||
| 455 | Ga0501082_0007976 | |||
| 456 | Ga0501082_0094095 | |||
| 457 | Ga0530510_0014020 | |||
| 458 | 2842779215 | |||
| 459 | 2883578797 | |||
| 460 | 2894774753 | |||
| 461 | 2929205836 | |||
| 462 | 641335789 | |||
| 463 | 643389603 | |||
| 464 | 8055916507 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7mjx-assembly1.cif.gz_A | miab in the complex with 5'-deoxyadenosine, methionine and rna | 0.9185 | 15 | 457 |
| 7mjx-assembly1.cif.gz_A | miab in the complex with 5'-deoxyadenosine, methionine and rna | 0.9126 | 15 | 457 |
| 2qgq-assembly4.cif.gz_D | crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 | 0.904 | 161 | 454 |
| 7mjz-assembly1.cif.gz_A | the structure of miab with pentasulfide bridge | 0.9036 | 14 | 457 |
| 2qgq-assembly1.cif.gz_A | crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 | 0.9021 | 162 | 454 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0AEI1_145_378_3.80.30.20 | Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain | 0.9718 | 161 | 392 | 3.80.30.20 |
| af_P0AEI1_3_129_3.40.50.12160 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain | 0.9686 | 15 | 144 | 3.40.50.12160 |
| af_P0AEI1_378_440_2.40.50.140 | Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins | 0.965 | 394 | 455 | 2.40.50.140 |
| 4jc0B03 | Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; | 0.963 | 279 | 395 | 3.30.750.200 |
| af_F1LV76_14_128_3.30.750.200 | Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; | 0.9613 | 277 | 387 | 3.30.750.200 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2M7XLY8-F1-model_v4 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.982 | 286 | 385 |
GO:0005829
GO:0035597 GO:0051539 |
| AF-A0A4Q3UT44-F1-model_v4 | Radical SAM protein | 0.978 | 279 | 454 |
GO:0005829
GO:0035597 GO:0051539 |
| AF-A0A381H6Q8-F1-model_v4 | deleted | 0.976 | 210 | 458 |
|
| AF-A0A7V3SUC0-F1-model_v4 | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) | 0.9758 | 269 | 458 |
GO:0005829
GO:0035597 GO:0046872 GO:0051539 |
| AF-A0A258C5D1-F1-model_v4 | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) | 0.9725 | 200 | 454 |
GO:0005829
GO:0035597 GO:0046872 GO:0051539 |