F345017

General Info

Members Datasets Scaffolds Average Seq Length
232 171 221 541

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10001110|Ga0105237_1000111024
Length 617
Sequence MPVDGARLAPKPEHIHHHGVMFDAIGLRETESVILRMVSCPVDLFSTSTPRSIRQDSELECCHRCSLIRNQQRRDGVKVDRRQTLGLIAASTAGAATAGVPGRKATGPFKPDWPSLTGDYRAPDWFRDAKFGIWAHWSAQCVPEAGDWYAREMYRQGSPIYEKHLARYGHPTSFGFMEIDNLWKAENWQPERLIDLYTRAGAKYFVALANHHDNFDAFDSQYHAWNSVRVGPRRDIVGTWAKAARARGLRFGVSNHSAHAWHWLQLAYGYDPEGPRQGQRYDAARLTAAAGKGKWWEGLDPQELYAGRTSLALPDGIPSMLEANASSERTNYVWTEGIPRENPGFARSWFLRCRDLIDKYHPDLLYFDNTNLPLEHYGLEIAAHFYNASAARSGRADVVINAKNMPPAIRMGLVEDVERGGKASIEIYPWQTDTCIGNWHYDRALYERNGYKSAATVIHTLCDVMSKNGNLLLNVPVRGDGTIDEKEERIVEEIAAWMGRYGPAIHGTRPWRYHAEGPTKPNSGSFNEGGPNSPYTPADIRYARKGADVHAFVLGWPQDGVARLTLLGRDNPVGRGQAFDRRGDALMVTLPEALRNPIGVGLIVQGAGLTEGSLAEA

Samples

Sample ID Description Type Environment
1 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
2 2643221585 Pelomonas sp. Root662 Isolate Unclassified
3 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
4 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
5 2643221656 Pelomonas sp. Root405 Isolate Unclassified
6 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
9 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
15 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
16 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
17 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
18 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
111 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
112 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
113 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
114 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
120 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
121 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
122 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
123 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
124 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
125 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
126 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
133 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
145 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.69
Metatranscriptomes 0
Isolates 4.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.97
Nodule 0.43
Rhizoplane 0
Rhizosphere 64.66
Stem 0
Stem Tuber 0
Unclassified 15.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000660 3300002738 Bacteria 16119
2 JGI25157J39369_1000008 3300002741 Bacteria 211083
3 JGI25164J39214_1002382 3300002772 Bacteria 2931
4 JGI25165J46597_1001582 3300003214 Bacteria 11087
5 rootH2_10004235 3300003320 Bacteria 5850
6 rootH2_10004486 3300003320 Bacteria 21976
7 rootL2_10003836 3300003322 Bacteria 11585
8 rootL2_10306406 3300003322 Bacteria 3143
9 rootH1_10009083 3300003323 Bacteria 14679
10 rootH1_10017144 3300003323 Bacteria 12968
11 rootH1_10080473 3300003323 Bacteria 6211
12 rootH1_10139747 3300003323 Bacteria 8206
13 Ga0055539_1000042 3300003752 Bacteria 199725
14 Ga0055539_1000363 3300003752 Bacteria 19507
15 Ga0055539_1003419 3300003752 Bacteria 2224
16 Ga0055533_1000006 3300003756 Bacteria 635559
17 Ga0055525_1001006 3300003759 Bacteria 7486
18 Ga0055524_1000803 3300003775 Bacteria 20827
19 Ga0055540_1015717 3300003792 Bacteria 2187
20 Ga0055531_10001880 3300003794 Bacteria 14710
21 Ga0070683_100100952 3300005329 Bacteria 2717
22 Ga0070666_10006388 3300005335 Bacteria 7248
23 Ga0070671_100004207 3300005355 Bacteria 11381
24 Ga0070659_100031971 3300005366 Bacteria 4079
25 Ga0070659_100100922 3300005366 Bacteria 2323
26 Ga0070667_100003767 3300005367 Bacteria 12878
27 Ga0070678_100043545 3300005456 Bacteria 3198
28 Ga0068867_100000130 3300005459 Bacteria 48140
29 Ga0070698_100054767 3300005471 Bacteria 4049
30 Ga0070665_100086513 3300005548 Bacteria 3139
31 Ga0070665_100100383 3300005548 Bacteria 2898
32 Ga0068855_100027046 3300005563 Bacteria 6863
33 Ga0068855_100033519 3300005563 Bacteria 6128
34 Ga0068855_100113007 3300005563 Bacteria 3116
35 Ga0068857_100002028 3300005577 Bacteria 16419
36 Ga0068854_100007044 3300005578 Bacteria 7176
37 Ga0068854_100016742 3300005578 Bacteria 4892
38 Ga0068859_100002023 3300005617 Bacteria 20697
39 Ga0068861_100018340 3300005719 Bacteria 4985
40 Ga0068863_100037063 3300005841 Bacteria 4643
41 Ga0068858_100001697 3300005842 Bacteria 22513
42 Ga0068858_100017568 3300005842 Bacteria 6708
43 Ga0068860_100030699 3300005843 Bacteria 5168
44 Ga0075367_10024802 3300006178 Bacteria 3383
45 Ga0075366_10032373 3300006195 Bacteria 3077
46 Ga0097621_100040131 3300006237 Bacteria 3762
47 Ga0075370_10004056 3300006353 Bacteria 7041
48 Ga0075370_10022512 3300006353 Bacteria 3461
49 Ga0075370_10023641 3300006353 Bacteria 3387
50 Ga0068871_100010796 3300006358 Bacteria 6684
51 Ga0097620_100002023 3300006931 Bacteria 20697
52 Ga0099823_1001212 3300006944 Bacteria 20620
53 Ga0105240_10022764 3300009093 Bacteria 8300
54 Ga0105240_10044289 3300009093 Bacteria 5656
55 Ga0105247_10000577 3300009101 Bacteria 29754
56 Ga0105243_10004624 3300009148 Bacteria 10846
57 Ga0105237_10001110 3300009545 Bacteria 36074
58 Ga0105237_10012368 3300009545 Bacteria 8993
59 Ga0105237_10079541 3300009545 Bacteria 3268
60 Ga0105238_10059287 3300009551 Bacteria 3834
61 Ga0105239_10005788 3300010375 Bacteria 14421
62 Ga0105239_10043182 3300010375 Bacteria 4940
63 Ga0105239_10080802 3300010375 Bacteria 3577
64 Ga0105246_10015787 3300011119 Bacteria 4774
65 Ga0157371_10070814 3300013102 Bacteria 2469
66 Ga0157370_10032218 3300013104 Bacteria 5119
67 Ga0157369_10009840 3300013105 Bacteria 10926
68 Ga0163162_10019778 3300013306 Bacteria 6611
69 Ga0157372_10012585 3300013307 Bacteria 9010
70 Ga0157372_10164166 3300013307 Bacteria 2568
71 Ga0163163_10000090 3300014325 Bacteria 97441
72 Ga0163163_10063402 3300014325 Bacteria 3664
73 Ga0157377_10000030 3300014745 Bacteria 124439
74 Ga0157379_10000778 3300014968 Bacteria 25897
75 Ga0157379_10044994 3300014968 Bacteria 3940
76 Ga0209674_100003 3300025226 Bacteria 2196646
77 Ga0209563_100010 3300025230 Bacteria 1337457
78 Ga0207427_100284 3300025231 Bacteria 36677
79 Ga0207427_100713 3300025231 Bacteria 15493
80 Ga0209258_100277 3300025242 Bacteria 86422
81 Ga0209646_1000039 3300025246 Bacteria 349637
82 Ga0209026_1000006 3300025250 Bacteria 677225
83 Ga0209677_100026 3300025253 Bacteria 382520
84 Ga0209677_100067 3300025253 Bacteria 146379
85 Ga0209677_102873 3300025253 Bacteria 6056
86 Ga0209759_1000020 3300025256 Bacteria 344904
87 Ga0209759_1000291 3300025256 Bacteria 69357
88 Ga0209233_1000456 3300025261 Bacteria 26708
89 Ga0209673_1003344 3300025273 Bacteria 9587
90 Ga0209050_1000951 3300025298 Bacteria 37656
91 Ga0209050_1016138 3300025298 Bacteria 3078
92 Ga0209256_1000158 3300025299 Bacteria 140925
93 Ga0209256_1001772 3300025299 Bacteria 20504
94 Ga0209051_1004226 3300025303 Bacteria 8952
95 Ga0209257_1002069 3300025304 Bacteria 21175
96 Ga0207680_10017726 3300025903 Bacteria 3767
97 Ga0207707_10120397 3300025912 Bacteria 2294
98 Ga0207695_10005283 3300025913 Bacteria 17220
99 Ga0207695_10012704 3300025913 Bacteria 10082
100 Ga0207671_10001950 3300025914 Bacteria 22753
101 Ga0207646_10085508 3300025922 Bacteria 2821
102 Ga0207694_10041045 3300025924 Bacteria 3565
103 Ga0207644_10005295 3300025931 Bacteria 8420
104 Ga0207690_10100435 3300025932 Bacteria 2065
105 Ga0207709_10003967 3300025935 Bacteria 8630
106 Ga0207667_10000868 3300025949 Bacteria 38878
107 Ga0207667_10045809 3300025949 Bacteria 4631
108 Ga0207667_10222136 3300025949 Bacteria 1935
109 Ga0207640_10014940 3300025981 Bacteria 4482
110 Ga0207658_10007865 3300025986 Bacteria 7260
111 Ga0207703_10001419 3300026035 Bacteria 21845
112 Ga0207702_10000111 3300026078 Bacteria 95170
113 Ga0207641_10042161 3300026088 Bacteria 3827
114 Ga0207648_10000952 3300026089 Bacteria 32760
115 Ga0207674_10003812 3300026116 Bacteria 18379
116 Ga0207675_100097112 3300026118 Bacteria 2774
117 Ga0207683_10004751 3300026121 Bacteria 11704
118 Ga0209813_10011670 3300027866 Bacteria 2302
119 Ga0268266_10059460 3300028379 Bacteria 3293
120 Ga0265336_10000057 3300028666 Bacteria 105485
121 Ga0307517_10026947 3300028786 Bacteria 6930
122 Ga0307515_10000026 3300028794 Bacteria 382411
123 Ga0307515_10112247 3300028794 Bacteria 3172
124 Ga0265324_10000763 3300029957 Bacteria 21215
125 Ga0265325_10004073 3300031241 Bacteria 9312
126 Ga0265331_10014703 3300031250 Bacteria 4158
127 Ga0265327_10012050 3300031251 Bacteria 5875
128 Ga0265316_10028842 3300031344 Bacteria 4573
129 Ga0307509_10211556 3300031507 Bacteria 1763
130 Ga0307408_100000087 3300031548 Bacteria 101616
131 Ga0265313_10003810 3300031595 Bacteria 11920
132 Ga0265314_10000420 3300031711 Bacteria 57180
133 Ga0265314_10066123 3300031711 Bacteria 2439
134 Ga0265342_10013558 3300031712 Bacteria 5459
135 Ga0307516_10005904 3300031730 Bacteria 14491
136 Ga0307516_10032067 3300031730 Bacteria 5292
137 Ga0307416_100159751 3300032002 Bacteria 2081
138 Ga0307411_10004115 3300032005 Bacteria 6901
139 Ga0373940_0013133 3300035088 Bacteria 1996
140 Ga0373932_0014526 3300035112 Bacteria 1981
141 Ga0373939_0000145 3300035114 Bacteria 19951
142 Ga0373960_0001165 3300035121 Bacteria 5718
143 Ga0373962_0007576 3300035242 Bacteria 2661
144 Ga0373931_0000096 3300035691 Bacteria 40532
145 Ga0395898_0013163 3300037466 Bacteria 8524
146 Ga0395905_0000292 3300037471 Bacteria 73325
147 Ga0395905_0003953 3300037471 Bacteria 15595
148 Ga0395901_0000986 3300038443 Bacteria 30762
149 Ga0439465_0000993 3300041413 Bacteria 9031
150 Ga0439433_0004120 3300041999 Bacteria 3126
151 Ga0439455_0002801 3300042012 Bacteria 3234
152 Ga0450888_000016 3300042126 Bacteria 11603
153 Ga0450890_000652 3300042127 Bacteria 5047
154 Ga0450891_000054 3300042129 Bacteria 8941
155 Ga0450892_000321 3300042130 Bacteria 5648
156 Ga0450893_0000107 3300042532 Bacteria 9652
157 Ga0466969_0000215 3300044656 Bacteria 31616
158 Ga0466969_0006291 3300044656 Bacteria 6314
159 Ga0466969_0026949 3300044656 Bacteria 2945
160 Ga0466966_0000181 3300044684 Bacteria 41793
161 Ga0466966_0000575 3300044684 Bacteria 23420
162 Ga0466966_0000943 3300044684 Bacteria 18592
163 Ga0466961_0002154 3300044693 Bacteria 12245
164 Ga0466961_0003493 3300044693 Bacteria 9797
165 Ga0466964_0003664 3300044706 Bacteria 5619
166 Ga0466971_0007280 3300044719 Bacteria 4817
167 Ga0466968_0013514 3300044735 Bacteria 3211
168 Ga0466970_0001126 3300044765 Bacteria 12958
169 Ga0466970_0002965 3300044765 Bacteria 8224
170 Ga0466970_0008710 3300044765 Bacteria 5111
171 Ga0466957_0000710 3300044842 Bacteria 17072
172 Ga0466957_0024885 3300044842 Bacteria 3546
173 Ga0466959_0000576 3300045049 Bacteria 21377
174 Ga0466959_0018059 3300045049 Bacteria 5176
175 Ga0451576_0047925 3300045051 Bacteria 4491
176 Ga0495585_0002794 3300046492 Bacteria 12159
177 Ga0495635_0041389 3300046663 Unclassified 3183
178 Ga0495674_0054207 3300047319 Unclassified 3522
179 Ga0496119_0000246 3300048922 Bacteria 76417
180 Ga0496120_0000232 3300048923 Bacteria 95655
181 Ga0496121_0002068 3300048924 Bacteria 31782
182 Ga0496121_0002192 3300048924 Bacteria 30563
183 Ga0496124_0000541 3300048927 Bacteria 64436
184 Ga0496124_0005673 3300048927 Bacteria 13921
185 Ga0496124_0008161 3300048927 Bacteria 10990
186 Ga0501292_000668 3300049515 Bacteria 4191
187 Ga0501300_000488 3300049523 Bacteria 5942
188 Ga0501032_0014943 3300049569 Bacteria 5491
189 Ga0501033_0003655 3300049570 Bacteria 12540
190 Ga0501034_0009905 3300049571 Bacteria 9959
191 Ga0501034_0085405 3300049571 Bacteria 3158
192 Ga0501037_0011755 3300049573 Bacteria 6446
193 Ga0501038_0014218 3300049574 Bacteria 7251
194 Ga0501039_0009353 3300049575 Bacteria 7469
195 Ga0501046_0001636 3300049580 Bacteria 21447
196 Ga0501067_0001919 3300049583 Bacteria 11420
197 Ga0501069_0008224 3300049585 Bacteria 5477
198 Ga0501070_0004446 3300049586 Bacteria 12038
199 Ga0501073_0004055 3300049589 Bacteria 11006
200 Ga0501074_0001155 3300049590 Bacteria 17276
201 Ga0501227_015763 3300049665 Bacteria 1691
202 Ga0501079_0003788 3300049741 Bacteria 11169
203 Ga0501080_0001040 3300049742 Bacteria 22818
204 Ga0501035_0008173 3300049822 Bacteria 9749
205 Ga0501044_0006311 3300049823 Bacteria 13108
206 nmdc:mga0k408_26719_c1 3300050493 Bacteria 3274
207 nmdc:mga0k408_5611_c1 3300050493 Bacteria 6668
208 nmdc:mga0k408_9755_c1 3300050493 Bacteria 5184
209 nmdc:mga07m45_22295_c1 3300050496 Bacteria 3456
210 nmdc:mga07m45_3374_c1 3300050496 Bacteria 7694
211 nmdc:mga07m45_33995_c1 3300050496 Bacteria 2342
212 nmdc:mga07m45_542_c1 3300050496 Bacteria 16014
213 nmdc:mga05p37_201607_c1 3300050507 Bacteria 2409
214 Ga0500643_000006 3300053087 Bacteria 479605
215 Ga0500595_003172 3300053119 Bacteria 7780
216 Ga0500595_003940 3300053119 Bacteria 6792
217 Ga0500559_0004927 3300053136 Bacteria 6215
218 Ga0500573_0000113 3300053140 Bacteria 33109
219 Ga0501082_0007125 3300060353 Bacteria 9641
220 Ga0466962_0000439 3300061719 Bacteria 18100
221 Ga0466962_0022760 3300061719 Bacteria 3011

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0009905 Ga0501034_0009905_2892_4313 444
2 3300050507 nmdc:mga05p37_201607_c1 nmdc:mga05p37_201607_c1_1042_2382 446
3 3300049665 Ga0501227_015763 Ga0501227_015763_258_1670 470
4 3300003322 rootL2_10306406 rootL2_103064062 489
5 3300049569 Ga0501032_0014943 Ga0501032_0014943_3808_5430 498
6 3300049574 Ga0501038_0014218 Ga0501038_0014218_131_1753 498
7 3300046492 Ga0495585_0002794 Ga0495585_0002794_4275_5858 500
8 3300031251 Ga0265327_10012050 Ga0265327_100120502 504
9 3300049570 Ga0501033_0003655 Ga0501033_0003655_8001_9623 504
10 3300049573 Ga0501037_0011755 Ga0501037_0011755_999_2621 504
11 3300049575 Ga0501039_0009353 Ga0501039_0009353_82_1704 504
12 3300049580 Ga0501046_0001636 Ga0501046_0001636_9591_11213 504
13 3300049589 Ga0501073_0004055 Ga0501073_0004055_3618_5240 504
14 3300049590 Ga0501074_0001155 Ga0501074_0001155_6668_8290 504
15 3300049741 Ga0501079_0003788 Ga0501079_0003788_5499_7121 504
16 3300049742 Ga0501080_0001040 Ga0501080_0001040_17389_19011 504
17 3300049822 Ga0501035_0008173 Ga0501035_0008173_4320_5942 504
18 3300049823 Ga0501044_0006311 Ga0501044_0006311_5271_6893 504
19 3300049583 Ga0501067_0001919 Ga0501067_0001919_9600_11222 505
20 3300049585 Ga0501069_0008224 Ga0501069_0008224_49_1671 505
21 3300049586 Ga0501070_0004446 Ga0501070_0004446_5447_7069 505
22 3300060353 Ga0501082_0007125 Ga0501082_0007125_5195_6817 505
23 3300005563 Ga0068855_100113007 Ga0068855_1001130072 506
24 3300013104 Ga0157370_10032218 Ga0157370_100322184 506
25 3300025912 Ga0207707_10120397 Ga0207707_101203972 506
26 3300025949 Ga0207667_10222136 Ga0207667_102221362 506
27 3300003323 rootH1_10080473 rootH1_100804733 507
28 3300003214 JGI25165J46597_1001582 JGI25165J46597_10015826 518
29 3300025231 Ga0207427_100713 Ga0207427_1007137 518
30 3300025261 Ga0209233_1000456 Ga0209233_100045618 518
31 3300049571 Ga0501034_0085405 Ga0501034_0085405_1245_2870 519
32 3300044656 Ga0466969_0026949 Ga0466969_0026949_908_2488 520
33 3300044684 Ga0466966_0000943 Ga0466966_0000943_3715_5295 520
34 3300044693 Ga0466961_0002154 Ga0466961_0002154_8644_10224 520
35 3300044765 Ga0466970_0002965 Ga0466970_0002965_5740_7320 520
36 3300045049 Ga0466959_0000576 Ga0466959_0000576_14441_16021 520
37 3300061719 Ga0466962_0000439 Ga0466962_0000439_14067_15647 520
38 3300045051 Ga0451576_0047925 Ga0451576_0047925_314_2005 523
39 3300025914 Ga0207671_10001950 Ga0207671_100019507 524
40 3300005471 Ga0070698_100054767 Ga0070698_1000547672 525
41 3300006195 Ga0075366_10032373 Ga0075366_100323732 525
42 3300025922 Ga0207646_10085508 Ga0207646_100855082 525
43 3300050493 nmdc:mga0k408_26719_c1 nmdc:mga0k408_26719_c1_1281_2918 525
44 3300006178 Ga0075367_10024802 Ga0075367_100248022 527
45 3300006353 Ga0075370_10023641 Ga0075370_100236412 527
46 3300027866 Ga0209813_10011670 Ga0209813_100116702 527
47 3300050493 nmdc:mga0k408_5611_c1 nmdc:mga0k408_5611_c1_4628_6235 527
48 3300050496 nmdc:mga07m45_22295_c1 nmdc:mga07m45_22295_c1_522_2129 527
49 3300003322 rootL2_10003836 rootL2_100038363 528
50 3300049523 Ga0501300_000488 Ga0501300_000488_1714_3366 530
51 3300003323 rootH1_10139747 rootH1_101397476 531
52 3300005548 Ga0070665_100086513 Ga0070665_1000865133 531
53 3300009093 Ga0105240_10044289 Ga0105240_100442894 531
54 3300010375 Ga0105239_10043182 Ga0105239_100431824 531
55 3300042012 Ga0439455_0002801 Ga0439455_0002801_1113_2759 531
56 3300005355 Ga0070671_100004207 Ga0070671_1000042072 532
57 3300005367 Ga0070667_100003767 Ga0070667_1000037677 532
58 3300005617 Ga0068859_100002023 Ga0068859_10000202312 532
59 3300005841 Ga0068863_100037063 Ga0068863_1000370632 532
60 3300005842 Ga0068858_100001697 Ga0068858_1000016978 532
61 3300006931 Ga0097620_100002023 Ga0097620_10000202312 532
62 3300025931 Ga0207644_10005295 Ga0207644_100052954 532
63 3300025986 Ga0207658_10007865 Ga0207658_100078653 532
64 3300026035 Ga0207703_10001419 Ga0207703_1000141915 532
65 3300026088 Ga0207641_10042161 Ga0207641_100421612 532
66 3300048924 Ga0496121_0002068 Ga0496121_0002068_27391_29016 532
67 3300048924 Ga0496121_0002192 Ga0496121_0002192_1632_3314 532
68 3300053087 Ga0500643_000006 Ga0500643_000006_136822_138447 532
69 3300003792 Ga0055540_1015717 Ga0055540_10157172 533
70 3300003794 Ga0055531_10001880 Ga0055531_100018802 533
71 3300006944 Ga0099823_1001212 Ga0099823_100121213 533
72 3300025273 Ga0209673_1003344 Ga0209673_10033446 533
73 3300025298 Ga0209050_1000951 Ga0209050_100095115 533
74 3300025299 Ga0209256_1001772 Ga0209256_10017726 533
75 3300025303 Ga0209051_1004226 Ga0209051_10042264 533
76 3300025304 Ga0209257_1002069 Ga0209257_100206913 533
77 3300031548 Ga0307408_100000087 Ga0307408_10000008723 533
78 3300003320 rootH2_10004235 rootH2_100042353 534
79 3300005548 Ga0070665_100100383 Ga0070665_1001003832 534
80 3300005842 Ga0068858_100017568 Ga0068858_1000175682 534
81 3300006237 Ga0097621_100040131 Ga0097621_1000401313 534
82 3300006358 Ga0068871_100010796 Ga0068871_1000107964 534
83 3300009545 Ga0105237_10001110 Ga0105237_1000111024 534
84 3300013306 Ga0163162_10019778 Ga0163162_100197786 534
85 3300014325 Ga0163163_10000090 Ga0163163_1000009011 534
86 3300014968 Ga0157379_10000778 Ga0157379_1000077815 534
87 3300025924 Ga0207694_10041045 Ga0207694_100410451 534
88 3300028379 Ga0268266_10059460 Ga0268266_100594602 534
89 3300037471 Ga0395905_0000292 Ga0395905_0000292_57330_58949 534
90 3300046663 Ga0495635_0041389 Ga0495635_0041389_347_1978 534
91 3300047319 Ga0495674_0054207 Ga0495674_0054207_1767_3398 534
92 3300053119 Ga0500595_003172 Ga0500595_003172_4874_6505 534
93 3300053119 Ga0500595_003940 Ga0500595_003940_5149_6780 534
94 3300053140 Ga0500573_0000113 Ga0500573_0000113_17093_18763 534
95 3300005329 Ga0070683_100100952 Ga0070683_1001009522 535
96 3300005456 Ga0070678_100043545 Ga0070678_1000435452 535
97 3300009545 Ga0105237_10079541 Ga0105237_100795412 535
98 3300009551 Ga0105238_10059287 Ga0105238_100592872 535
99 3300010375 Ga0105239_10080802 Ga0105239_100808022 535
100 3300011119 Ga0105246_10015787 Ga0105246_100157872 535
101 3300014325 Ga0163163_10063402 Ga0163163_100634022 535
102 3300026121 Ga0207683_10004751 Ga0207683_100047517 535
103 3300031250 Ga0265331_10014703 Ga0265331_100147032 535
104 3300031595 Ga0265313_10003810 Ga0265313_100038102 535
105 iso_pu_bacteria 2928526807 2928527435 536
106 3300006353 Ga0075370_10004056 Ga0075370_100040563 537
107 3300050496 nmdc:mga07m45_542_c1 nmdc:mga07m45_542_c1_4586_6244 537
108 3300003775 Ga0055524_1000803 Ga0055524_10008034 538
109 3300009101 Ga0105247_10000577 Ga0105247_100005778 538
110 3300014968 Ga0157379_10044994 Ga0157379_100449942 538
111 3300025299 Ga0209256_1000158 Ga0209256_10001588 538
112 3300003323 rootH1_10009083 rootH1_100090832 539
113 3300005366 Ga0070659_100031971 Ga0070659_1000319713 539
114 3300013307 Ga0157372_10012585 Ga0157372_100125853 539
115 3300025932 Ga0207690_10100435 Ga0207690_101004351 539
116 3300028794 Ga0307515_10000026 Ga0307515_10000026233 539
117 3300044842 Ga0466957_0024885 Ga0466957_0024885_162_1832 539
118 3300048922 Ga0496119_0000246 Ga0496119_0000246_65809_67482 539
119 3300048923 Ga0496120_0000232 Ga0496120_0000232_63710_65383 539
120 3300048927 Ga0496124_0008161 Ga0496124_0008161_57_1751 539
121 3300005578 Ga0068854_100016742 Ga0068854_1000167422 540
122 3300009545 Ga0105237_10012368 Ga0105237_100123682 540
123 3300025981 Ga0207640_10014940 Ga0207640_100149404 540
124 3300031344 Ga0265316_10028842 Ga0265316_100288423 540
125 3300048927 Ga0496124_0000541 Ga0496124_0000541_58331_60010 540
126 3300048927 Ga0496124_0005673 Ga0496124_0005673_9611_11290 540
127 iso_pu_bacteria 2643221646 2644257033 540
128 3300005719 Ga0068861_100018340 Ga0068861_1000183404 541
129 3300026118 Ga0207675_100097112 Ga0207675_1000971123 541
130 iso_pu_bacteria 2643221585 2643935791 541
131 iso_pu_bacteria 2643221639 2644218898 541
132 iso_pu_bacteria 2643221646 2644257031 541
133 iso_pu_bacteria 2643221646 2644257032 541
134 iso_pu_bacteria 2643221656 2644317574 541
135 3300005335 Ga0070666_10006388 Ga0070666_100063885 542
136 3300005843 Ga0068860_100030699 Ga0068860_1000306993 542
137 3300006353 Ga0075370_10022512 Ga0075370_100225122 542
138 3300025256 Ga0209759_1000291 Ga0209759_100029134 542
139 3300025903 Ga0207680_10017726 Ga0207680_100177262 542
140 3300028666 Ga0265336_10000057 Ga0265336_1000005730 542
141 3300029957 Ga0265324_10000763 Ga0265324_100007637 542
142 3300044656 Ga0466969_0006291 Ga0466969_0006291_1520_3154 542
143 3300044684 Ga0466966_0000575 Ga0466966_0000575_17529_19163 542
144 3300044706 Ga0466964_0003664 Ga0466964_0003664_1701_3335 542
145 3300044719 Ga0466971_0007280 Ga0466971_0007280_3147_4781 542
146 3300044735 Ga0466968_0013514 Ga0466968_0013514_1524_3158 542
147 3300044765 Ga0466970_0008710 Ga0466970_0008710_2358_3992 542
148 3300044842 Ga0466957_0000710 Ga0466957_0000710_2304_3938 542
149 3300045049 Ga0466959_0018059 Ga0466959_0018059_1960_3594 542
150 3300050496 nmdc:mga07m45_3374_c1 nmdc:mga07m45_3374_c1_1164_2798 542
151 3300053136 Ga0500559_0004927 Ga0500559_0004927_3962_5641 542
152 3300061719 Ga0466962_0022760 Ga0466962_0022760_86_1720 542
153 3300003320 rootH2_10004486 rootH2_100044863 543
154 3300031241 Ga0265325_10004073 Ga0265325_100040735 543
155 3300031711 Ga0265314_10000420 Ga0265314_1000042040 543
156 3300031711 Ga0265314_10066123 Ga0265314_100661232 543
157 3300031712 Ga0265342_10013558 Ga0265342_100135582 543
158 3300032005 Ga0307411_10004115 Ga0307411_100041152 543
159 3300037466 Ga0395898_0013163 Ga0395898_0013163_4595_6226 543
160 3300038443 Ga0395901_0000986 Ga0395901_0000986_29055_30686 543
161 3300003752 Ga0055539_1003419 Ga0055539_10034192 544
162 3300025253 Ga0209677_102873 Ga0209677_1028732 544
163 3300031507 Ga0307509_10211556 Ga0307509_102115561 544
164 3300042126 Ga0450888_000016 Ga0450888_000016_8044_9684 544
165 3300042127 Ga0450890_000652 Ga0450890_000652_465_2105 544
166 3300042129 Ga0450891_000054 Ga0450891_000054_4853_6493 544
167 3300042130 Ga0450892_000321 Ga0450892_000321_3738_5378 544
168 3300042532 Ga0450893_0000107 Ga0450893_0000107_4938_6578 544
169 iso_pu_bacteria 2643221639 2644218846 544
170 iso_pu_bacteria 2643221646 2644258188 544
171 3300025298 Ga0209050_1016138 Ga0209050_10161382 545
172 3300028794 Ga0307515_10112247 Ga0307515_101122472 545
173 iso_pu_bacteria 2643221544 2643745974 547
174 3300013102 Ga0157371_10070814 Ga0157371_100708142 548
175 3300035088 Ga0373940_0013133 Ga0373940_0013133_315_1970 550
176 3300035112 Ga0373932_0014526 Ga0373932_0014526_93_1748 550
177 3300035114 Ga0373939_0000145 Ga0373939_0000145_17626_19281 550
178 3300035121 Ga0373960_0001165 Ga0373960_0001165_3824_5479 550
179 3300035242 Ga0373962_0007576 Ga0373962_0007576_478_2133 550
180 3300035691 Ga0373931_0000096 Ga0373931_0000096_11781_13436 550
181 3300028794 Ga0307515_10000026 Ga0307515_10000026246 551
182 3300005366 Ga0070659_100100922 Ga0070659_1001009221 552
183 3300005459 Ga0068867_100000130 Ga0068867_10000013023 552
184 3300005563 Ga0068855_100027046 Ga0068855_1000270464 552
185 3300009148 Ga0105243_10004624 Ga0105243_100046245 552
186 3300014745 Ga0157377_10000030 Ga0157377_1000003058 552
187 3300025935 Ga0207709_10003967 Ga0207709_100039674 552
188 3300025949 Ga0207667_10000868 Ga0207667_1000086819 552
189 3300026089 Ga0207648_10000952 Ga0207648_1000095223 552
190 3300028786 Ga0307517_10026947 Ga0307517_100269474 552
191 3300031730 Ga0307516_10005904 Ga0307516_100059044 552
192 3300031730 Ga0307516_10032067 Ga0307516_100320672 552
193 3300032002 Ga0307416_100159751 Ga0307416_1001597512 552
194 3300037471 Ga0395905_0003953 Ga0395905_0003953_11325_12983 552
195 3300041413 Ga0439465_0000993 Ga0439465_0000993_5515_7179 552
196 3300041999 Ga0439433_0004120 Ga0439433_0004120_443_2113 552
197 3300049515 Ga0501292_000668 Ga0501292_000668_1021_2679 552
198 3300050493 nmdc:mga0k408_9755_c1 nmdc:mga0k408_9755_c1_62_1720 552
199 3300050496 nmdc:mga07m45_33995_c1 nmdc:mga07m45_33995_c1_83_1741 552
200 3300002738 JGI25154J39366_1000660 JGI25154J39366_10006609 553
201 3300002741 JGI25157J39369_1000008 JGI25157J39369_10000084 553
202 3300002772 JGI25164J39214_1002382 JGI25164J39214_10023822 553
203 3300003323 rootH1_10017144 rootH1_100171443 553
204 3300003752 Ga0055539_1000042 Ga0055539_100004256 553
205 3300003752 Ga0055539_1000363 Ga0055539_10003639 553
206 3300003756 Ga0055533_1000006 Ga0055533_1000006229 553
207 3300003759 Ga0055525_1001006 Ga0055525_10010065 553
208 3300005563 Ga0068855_100033519 Ga0068855_1000335192 553
209 3300005577 Ga0068857_100002028 Ga0068857_1000020284 553
210 3300005578 Ga0068854_100007044 Ga0068854_1000070445 553
211 3300009093 Ga0105240_10022764 Ga0105240_100227643 553
212 3300010375 Ga0105239_10005788 Ga0105239_100057887 553
213 3300013105 Ga0157369_10009840 Ga0157369_100098402 553
214 3300013307 Ga0157372_10164166 Ga0157372_101641662 553
215 3300025226 Ga0209674_100003 Ga0209674_1000031108 553
216 3300025230 Ga0209563_100010 Ga0209563_100010836 553
217 3300025231 Ga0207427_100284 Ga0207427_1002844 553
218 3300025242 Ga0209258_100277 Ga0209258_1002775 553
219 3300025246 Ga0209646_1000039 Ga0209646_1000039252 553
220 3300025250 Ga0209026_1000006 Ga0209026_1000006349 553
221 3300025253 Ga0209677_100026 Ga0209677_10002699 553
222 3300025253 Ga0209677_100067 Ga0209677_10006726 553
223 3300025256 Ga0209759_1000020 Ga0209759_10000204 553
224 3300025913 Ga0207695_10005283 Ga0207695_100052832 553
225 3300025913 Ga0207695_10012704 Ga0207695_100127047 553
226 3300025949 Ga0207667_10045809 Ga0207667_100458093 553
227 3300026078 Ga0207702_10000111 Ga0207702_1000011146 553
228 3300026116 Ga0207674_10003812 Ga0207674_100038129 553
229 3300044656 Ga0466969_0000215 Ga0466969_0000215_22671_24332 553
230 3300044684 Ga0466966_0000181 Ga0466966_0000181_31017_32678 553
231 3300044693 Ga0466961_0003493 Ga0466961_0003493_3003_4664 553
232 3300044765 Ga0466970_0001126 Ga0466970_0001126_3990_5651 553

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01120

Alpha_L_fucos

Alpha-L-fucosidase

97

503

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lnp-assembly4.cif.gz_E structure of the exo-alpha-l-galactosidase bpgh29 (d264n mutant) from bacteroides plebeius in complex with paranitrophenyl-alpha-l-galactopyranoside 0.8862 40 551
7lnp-assembly3.cif.gz_D structure of the exo-alpha-l-galactosidase bpgh29 (d264n mutant) from bacteroides plebeius in complex with paranitrophenyl-alpha-l-galactopyranoside 0.8842 40 551
7lnp-assembly2.cif.gz_C structure of the exo-alpha-l-galactosidase bpgh29 (d264n mutant) from bacteroides plebeius in complex with paranitrophenyl-alpha-l-galactopyranoside 0.8673 32 549
7lk7-assembly1.cif.gz_A structure of the exo-alpha-l-galactosidase bpgh29 from bacteroides plebeius in complex with l-galactose 0.8662 40 551
7ljj-assembly1.cif.gz_A structure of the exo-alpha-l-galactosidase bpgh29 from bacteroides plebeius 0.8487 40 551
ID Description Score Start End Superfamily
4pspA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7973 39 437 3.20.20.80
4pspA02 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.7972 439 551 2.60.40.1180
af_P04066_33_365_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7933 39 430 3.20.20.80
4pspA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7931 39 437 3.20.20.80
af_Q551C1_18_358_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7884 35 433 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A4R3SY45-F1-model_v4 Alpha-L-fucosidase 0.9733 139 553 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-A0A519NMT6-F1-model_v4 Alpha-L-fucosidase 0.9732 165 497 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-A0A7Y5V9C6-F1-model_v4 Alpha-L-fucosidase 0.9728 307 553 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-A0A520AB77-F1-model_v4 Alpha-L-fucosidase 0.9671 39 385 GO:0004560
GO:0005764
GO:0006004
GO:0016139
AF-A0A520FIF7-F1-model_v4 deleted 0.9654 67 553

Feature Viewer

pLDDT pTM Quality
89.28 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map