F344403

General Info

Members Datasets Scaffolds Average Seq Length
231 191 160 326

Family's Representative Sequence

Representative Sequence 3300047323|Ga0495683_0098125|Ga0495683_0098125_40_1161
Length 373
Sequence VSVSSTKERSNLISIQNPTYFHQKCHFTKRCSHVKLFKASGAIVMAFKVSSVQFQHRANDKAYNLGRIESLTLQAVQAGSQLVAFPEMCLCGYWHVPKLDGAALHALAEPLSGPSVSYVARLAREHSIAIGAGFLELAENGALYNSYAVCMPDGQVHCHRKLHAWEHRLISSGDSFTVFDTPWGIRAGILICWDNNLIENARATALLGAEILIAPHQAGGGASVSPHGMKRIPVEKWIRRHEDPEAIEAEIRGPNGREWFLRWLPSRAHDNGMFLVFSNGVGQDEDEVRTGNAMILDPYGRILVETWQAADAIVSTELDLALLDKCTGQRWIRGRRPELYGCLTEPNPHGLSPMEARFSDAPTRSPPPAEKTL

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2508501050 Microvirga lupini Lut6 Isolate Nodule
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
6 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
7 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
8 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
9 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
10 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
11 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
12 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
13 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
14 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
15 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
16 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
17 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
18 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
19 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
20 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
21 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
22 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
23 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
24 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
25 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
26 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
27 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
28 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
29 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
30 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
31 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
32 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
33 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
34 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
35 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
36 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
37 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
38 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
39 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
40 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
41 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
42 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
43 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
44 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
45 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
46 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
47 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
48 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
49 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
50 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
51 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
52 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
53 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
54 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
55 2932406140 Serratia sp. 2723 Isolate Rhizosphere
56 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
57 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
58 2936381700 Rhizobium chutanense C16 Isolate Unclassified
59 2937967321 Serratia sp. YC16 Isolate Unclassified
60 2939577877 Serratia sp. 509 Isolate Rhizosphere
61 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
62 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
63 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
64 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
65 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
66 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
67 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
68 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
69 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
70 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
71 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
72 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
73 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
74 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
75 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
76 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
77 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
78 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
79 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
80 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
81 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
82 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
83 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
84 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
85 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
86 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
87 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
88 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
89 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
90 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
91 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
92 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
93 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
94 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
95 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
96 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
97 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
98 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
99 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
104 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
106 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
114 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
115 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
132 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
133 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
134 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
141 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
142 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
143 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
144 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
145 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
146 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
147 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
148 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
149 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
154 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
155 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
158 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
159 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
165 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
166 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
176 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
177 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
178 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
183 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
184 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
185 640753048 Serratia proteamaculans 568 Isolate Endosphere
186 8004592986 Serratia sp. S119 Isolate Unclassified
187 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
188 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
189 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
190 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
191 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.26
Metatranscriptomes 0
Isolates 30.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.12
Nodule 13.85
Rhizoplane 0.87
Rhizosphere 49.78
Stem 0
Stem Tuber 0
Unclassified 23.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10035034 3300001979 Bacteria 1574
2 JGI25156J39149_1000008 3300002705 Bacteria 229035
3 JGI25162J39368_1001704 3300002737 Bacteria 10701
4 JGI25154J39366_1000050 3300002738 Bacteria 124480
5 JGI25157J39369_1000028 3300002741 Bacteria 147384
6 JGI25151J46595_10000988 3300003187 Bacteria 21507
7 JGI25165J46597_1001069 3300003214 Bacteria 17583
8 JGI25153J46596_10003764 3300003215 Bacteria 8374
9 Ga0055526_1034377 3300003771 Bacteria 1385
10 Ga0055524_1014497 3300003775 Bacteria 2918
11 Ga0055528_1004734 3300003790 Bacteria 6490
12 Ga0070668_100046819 3300005347 Bacteria 3323
13 Ga0070673_100374499 3300005364 Bacteria 1268
14 Ga0068856_100054934 3300005614 Bacteria 3930
15 Ga0075428_100001489 3300006844 Bacteria 25055
16 Ga0075430_100049555 3300006846 Bacteria 3544
17 Ga0075431_100071306 3300006847 Bacteria 3585
18 Ga0075431_100541272 3300006847 Bacteria 1152
19 Ga0075429_100052280 3300006880 Bacteria 3554
20 Ga0079104_1000936 3300006946 Bacteria 23246
21 Ga0105251_10000720 3300009011 Bacteria 30488
22 Ga0105251_10026770 3300009011 Bacteria 2932
23 Ga0105244_10000771 3300009036 Bacteria 27343
24 Ga0105244_10092402 3300009036 Bacteria 1487
25 Ga0105250_10000105 3300009092 Bacteria 75608
26 Ga0105247_10000103 3300009101 Bacteria 90413
27 Ga0114129_10009485 3300009147 Bacteria 13875
28 Ga0105248_10509533 3300009177 Bacteria 1357
29 Ga0105246_10047822 3300011119 Bacteria 2923
30 Ga0157371_10000237 3300013102 Bacteria 78761
31 Ga0157370_10005370 3300013104 Bacteria 14388
32 Ga0163161_10000001 3300017792 Bacteria 2041488
33 Ga0209435_100020 3300025206 Bacteria 229105
34 Ga0209437_100205 3300025233 Bacteria 115669
35 Ga0209646_1000070 3300025246 Bacteria 229105
36 Ga0209646_1007840 3300025246 Bacteria 1731
37 Ga0209026_1000057 3300025250 Bacteria 229105
38 Ga0209759_1000047 3300025256 Bacteria 229105
39 Ga0209233_1000187 3300025261 Bacteria 133091
40 Ga0209673_1017218 3300025273 Bacteria 2670
41 Ga0209130_1002411 3300025284 Bacteria 9423
42 Ga0209025_1000282 3300025294 Bacteria 115627
43 Ga0209564_1024049 3300025295 Bacteria 2093
44 Ga0209758_1000974 3300025297 Bacteria 38538
45 Ga0209758_1005452 3300025297 Bacteria 9790
46 Ga0209256_1012624 3300025299 Bacteria 3208
47 Ga0207426_1000182 3300025302 Bacteria 155724
48 Ga0207696_1000001 3300025711 Bacteria 2579611
49 Ga0207696_1000131 3300025711 Bacteria 132958
50 Ga0207696_1007293 3300025711 Bacteria 4345
51 Ga0207655_1000322 3300025728 Bacteria 70535
52 Ga0207655_1014731 3300025728 Bacteria 4396
53 Ga0207655_1018894 3300025728 Bacteria 3632
54 Ga0207713_1000024 3300025735 Bacteria 339156
55 Ga0207713_1000084 3300025735 Bacteria 160822
56 Ga0207710_10000140 3300025900 Bacteria 83223
57 Ga0207661_10724188 3300025944 Bacteria 915
58 Ga0207703_10245973 3300026035 Bacteria 1610
59 Ga0207675_100553910 3300026118 Bacteria 1149
60 Ga0209281_1000006 3300027111 Bacteria 1170244
61 Ga0209371_1001778 3300027312 Bacteria 13515
62 Ga0268256_1003379 3300030500 Bacteria 7226
63 Ga0307513_10088569 3300031456 Bacteria 3163
64 Ga0307508_10000009 3300031616 Bacteria 256966
65 Ga0307406_10033012 3300031901 Bacteria 3164
66 Ga0307414_10129042 3300032004 Bacteria 1959
67 Ga0307411_10374182 3300032005 Bacteria 1169
68 Ga0395900_0130307 3300037418 Bacteria 2578
69 Ga0395905_0007143 3300037471 Bacteria 11167
70 Ga0395905_0399886 3300037471 Bacteria 1268
71 Ga0436360_0940583 3300039438 Bacteria 4441
72 Ga0436361_0324518 3300039447 Bacteria 3502
73 Ga0436361_0957033 3300039447 Bacteria 4024
74 Ga0451839_0285644 3300041496 Bacteria 1540
75 Ga0451853_0328099 3300041512 Bacteria 2536
76 Ga0466972_0062368 3300044658 Bacteria 1786
77 Ga0466964_0168293 3300044706 Bacteria 1030
78 Ga0466970_0000392 3300044765 Bacteria 21245
79 Ga0466970_0026722 3300044765 Bacteria 3025
80 Ga0466970_0147752 3300044765 Bacteria 1297
81 Ga0466957_0001075 3300044842 Bacteria 14088
82 Ga0466958_0010900 3300045836 Bacteria 5105
83 Ga0466967_0025893 3300045976 Bacteria 4846
84 Ga0495627_000018 3300046453 Bacteria 315125
85 Ga0495627_021017 3300046453 Bacteria 2168
86 Ga0495591_001303 3300046458 Bacteria 15776
87 Ga0495638_0021242 3300046460 Bacteria 4281
88 Ga0495650_0017653 3300046471 Bacteria 3571
89 Ga0495607_0037240 3300046501 Bacteria 2923
90 Ga0495606_0022229 3300046507 Bacteria 4626
91 Ga0495610_0023629 3300046512 Bacteria 3335
92 Ga0495610_0026516 3300046512 Bacteria 3093
93 Ga0495620_0013426 3300046515 Bacteria 4193
94 Ga0495631_0047099 3300046518 Bacteria 1894
95 Ga0495632_0019305 3300046519 Bacteria 3717
96 Ga0495637_0055026 3300046520 Bacteria 1651
97 Ga0495643_0031648 3300046522 Bacteria 2943
98 Ga0495648_0000364 3300046524 Bacteria 50035
99 Ga0495648_0087360 3300046524 Bacteria 1756
100 Ga0495652_0174867 3300046529 Bacteria 1654
101 Ga0495654_0000179 3300046530 Bacteria 62287
102 Ga0495654_0070037 3300046530 Bacteria 1664
103 Ga0495609_0041019 3300046538 Bacteria 2082
104 Ga0495668_0051757 3300046616 Bacteria 2273
105 Ga0495625_0015878 3300046660 Bacteria 5943
106 Ga0495661_0054412 3300046665 Bacteria 2403
107 Ga0495649_0005735 3300046694 Bacteria 7830
108 Ga0495589_0000002 3300046794 Bacteria 758846
109 Ga0495589_0018563 3300046794 Bacteria 3565
110 Ga0495589_0050010 3300046794 Bacteria 2068
111 Ga0495660_0000460 3300046810 Bacteria 33895
112 Ga0495660_0032071 3300046810 Bacteria 2951
113 Ga0495683_0013741 3300047323 Bacteria 4228
114 Ga0495683_0098125 3300047323 Bacteria 1412
115 Ga0495687_022496 3300047443 Bacteria 3025
116 Ga0495673_0000025 3300047469 Bacteria 512352
117 Ga0495673_0000720 3300047469 Bacteria 31914
118 Ga0495686_0058331 3300047472 Bacteria 2406
119 Ga0495686_0086018 3300047472 Bacteria 1913
120 Ga0495626_0057333 3300048091 Bacteria 1782
121 Ga0496116_0000023 3300048919 Bacteria 475792
122 Ga0496117_0000463 3300048920 Bacteria 67832
123 Ga0496117_0008958 3300048920 Bacteria 9420
124 Ga0496117_0177809 3300048920 Bacteria 1227
125 Ga0496118_0000048 3300048921 Bacteria 253404
126 Ga0496118_0005966 3300048921 Bacteria 13594
127 Ga0496118_0032960 3300048921 Bacteria 4258
128 Ga0496118_0066937 3300048921 Bacteria 2620
129 Ga0496119_0000115 3300048922 Bacteria 114194
130 Ga0496119_0009872 3300048922 Bacteria 8108
131 Ga0496119_0029812 3300048922 Bacteria 3690
132 Ga0496120_0000052 3300048923 Bacteria 186071
133 Ga0496120_0000060 3300048923 Bacteria 175196
134 Ga0496122_0005980 3300048925 Bacteria 14236
135 Ga0496122_0043739 3300048925 Bacteria 3505
136 Ga0496122_0174145 3300048925 Bacteria 1292
137 Ga0496122_0229459 3300048925 Bacteria 1057
138 Ga0496124_0007581 3300048927 Bacteria 11507
139 Ga0496124_0010691 3300048927 Bacteria 9259
140 Ga0496124_0027046 3300048927 Bacteria 5160
141 Ga0496125_0071443 3300048928 Bacteria 2711
142 Ga0496126_0006497 3300048929 Bacteria 13013
143 Ga0496126_0012237 3300048929 Bacteria 8802
144 Ga0496126_0032705 3300048929 Bacteria 4898
145 Ga0501070_0017930 3300049586 Bacteria 5944
146 nmdc:mga05p37_1331_c1 3300050507 Bacteria 28701
147 nmdc:mga09592_3963_c1 3300050508 Bacteria 11926
148 nmdc:mga0qj67_7040_c1 3300050509 Bacteria 8293
149 nmdc:mga06r32_97749_c1 3300050510 Bacteria 2877
150 Ga0500644_0000004 3300053088 Bacteria 173652
151 Ga0500569_002956 3300053109 Bacteria 3411
152 Ga0500594_0025792 3300053118 Bacteria 1509
153 Ga0500658_0020805 3300053134 Bacteria 2480
154 Ga0500564_000165 3300053138 Bacteria 17461
155 Ga0500568_0059030 3300053139 Bacteria 1489
156 Ga0500588_0013632 3300053146 Bacteria 2042
157 Ga0500622_0004705 3300053156 Bacteria 8441
158 Ga0500624_000086 3300053157 Bacteria 47685
159 Ga0500636_0013153 3300053177 Bacteria 4855
160 Ga0466962_0068786 3300061719 Bacteria 1691

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047443 Ga0495687_022496 Ga0495687_022496_2184_3002 271
2 3300025944 Ga0207661_10724188 Ga0207661_107241881 277
3 3300048920 Ga0496117_0177809 Ga0496117_0177809_332_1189 278
4 3300026118 Ga0207675_100553910 Ga0207675_1005539102 280
5 3300025711 Ga0207696_1007293 Ga0207696_10072932 283
6 3300050509 nmdc:mga0qj67_7040_c1 nmdc:mga0qj67_7040_c1_7418_8281 283
7 3300048925 Ga0496122_0229459 Ga0496122_0229459_152_1045 293
8 3300048925 Ga0496122_0174145 Ga0496122_0174145_377_1270 295
9 3300053146 Ga0500588_0013632 Ga0500588_0013632_631_1581 304
10 3300039438 Ga0436360_0940583 Ga0436360_0940583_2220_3203 305
11 iso_pu_bacteria 2558860112 2558912937 311
12 iso_pu_bacteria 2816332119 2816423293 311
13 3300006880 Ga0075429_100052280 Ga0075429_1000522802 314
14 3300050508 nmdc:mga09592_3963_c1 nmdc:mga09592_3963_c1_513_1496 314
15 iso_pu_bacteria 2738543031 2739349391 316
16 3300044765 Ga0466970_0026722 Ga0466970_0026722_497_1462 317
17 3300045976 Ga0466967_0025893 Ga0466967_0025893_2031_2996 317
18 iso_pu_bacteria 2615840698 2616557396 317
19 iso_pu_bacteria 2894232714 2894235607 317
20 3300044706 Ga0466964_0168293 Ga0466964_0168293_11_988 318
21 3300046453 Ga0495627_021017 Ga0495627_021017_1030_1995 318
22 3300046529 Ga0495652_0174867 Ga0495652_0174867_615_1577 318
23 iso_pu_bacteria 2508501114 2509075729 318
24 iso_pu_bacteria 2510917020 2511121616 318
25 iso_pu_bacteria 2842482326 2842487263 318
26 iso_pu_bacteria 2904776348 2904778330 318
27 3300006847 Ga0075431_100071306 Ga0075431_1000713064 319
28 3300050510 nmdc:mga06r32_97749_c1 nmdc:mga06r32_97749_c1_1767_2735 319
29 iso_pu_bacteria 2513237085 2513576448 319
30 iso_pu_bacteria 2515154134 2515741949 319
31 iso_pu_bacteria 2516653085 2517081067 319
32 iso_pu_bacteria 2582581316 2585334396 319
33 iso_pu_bacteria 2617270742 2617385136 319
34 iso_pu_bacteria 2667528174 2671117071 319
35 iso_pu_bacteria 2775507266 2778173982 319
36 iso_pu_bacteria 2821443989 2821448487 319
37 iso_pu_bacteria 2838029111 2838034871 319
38 iso_pu_bacteria 2838686498 2838693585 319
39 iso_pu_bacteria 2838729681 2838735478 319
40 iso_pu_bacteria 2838742623 2838748380 319
41 iso_pu_bacteria 2841851746 2841858444 319
42 iso_pu_bacteria 2842156927 2842162692 319
43 iso_pu_bacteria 2842163707 2842167063 319
44 iso_pu_bacteria 2842180545 2842186196 319
45 iso_pu_bacteria 2842229732 2842236071 319
46 iso_pu_bacteria 2842243621 2842250748 319
47 iso_pu_bacteria 2842257432 2842263298 319
48 iso_pu_bacteria 2842271015 2842278054 319
49 iso_pu_bacteria 2842304105 2842310024 319
50 iso_pu_bacteria 2842475841 2842481635 319
51 iso_pu_bacteria 2842502639 2842507994 319
52 iso_pu_bacteria 2844454524 2844461083 319
53 iso_pu_bacteria 2844533157 2844534174 319
54 iso_pu_bacteria 2852387548 2852389862 319
55 iso_pu_bacteria 2857504554 2857506982 319
56 iso_pu_bacteria 2919408235 2919413866 319
57 iso_pu_bacteria 2933570622 2933576465 319
58 iso_pu_bacteria 2935901341 2935905775 319
59 iso_pu_bacteria 2936381700 2936384127 319
60 iso_pu_bacteria 3005416602 3005422314 319
61 iso_pu_bacteria 8005307578 8005313097 319
62 iso_pu_bacteria 8005314921 8005320349 319
63 iso_pu_bacteria 8005682033 8005687209 319
64 iso_pu_bacteria 8023680758 8023682389 319
65 3300053157 Ga0500624_000086 Ga0500624_000086_36631_37593 320
66 iso_pu_bacteria 2687453257 2688070509 320
67 iso_pu_bacteria 2919034639 2919036143 320
68 iso_pu_bacteria 2919538618 2919540617 320
69 3300026035 Ga0207703_10245973 Ga0207703_102459732 321
70 3300032004 Ga0307414_10129042 Ga0307414_101290422 321
71 3300032005 Ga0307411_10374182 Ga0307411_103741821 321
72 3300053138 Ga0500564_000165 Ga0500564_000165_2969_3943 321
73 3300053139 Ga0500568_0059030 Ga0500568_0059030_225_1199 321
74 iso_pu_bacteria 2506520007 2506577529 321
75 iso_pu_bacteria 2506520008 2506582667 321
76 iso_pu_bacteria 2508501050 2508731908 321
77 iso_pu_bacteria 2508501071 2508851464 321
78 iso_pu_bacteria 2654587920 2656277417 321
79 iso_pu_bacteria 2654587920 2656279132 321
80 iso_pu_bacteria 2671180115 2671584867 321
81 iso_pu_bacteria 2687453601 2689444008 321
82 iso_pu_bacteria 2772190666 2772438046 321
83 iso_pu_bacteria 2806310673 2807179579 321
84 iso_pu_bacteria 2869551831 2869553381 321
85 iso_pu_bacteria 2888366609 2888368051 321
86 iso_pu_bacteria 2932406140 2932408505 321
87 iso_pu_bacteria 2937967321 2937969789 321
88 iso_pu_bacteria 2939577877 2939581888 321
89 iso_pu_bacteria 640753048 640937017 321
90 iso_pu_bacteria 8004592986 8004597654 321
91 iso_pu_bacteria 8015394850 8015394886 321
92 3300003214 JGI25165J46597_1001069 JGI25165J46597_100106918 322
93 3300013102 Ga0157371_10000237 Ga0157371_1000023752 322
94 3300025233 Ga0209437_100205 Ga0209437_10020571 322
95 3300025261 Ga0209233_1000187 Ga0209233_100018791 322
96 3300025728 Ga0207655_1018894 Ga0207655_10188943 322
97 3300046458 Ga0495591_001303 Ga0495591_001303_6872_7846 322
98 3300046512 Ga0495610_0023629 Ga0495610_0023629_557_1534 322
99 3300046520 Ga0495637_0055026 Ga0495637_0055026_364_1341 322
100 3300046530 Ga0495654_0070037 Ga0495654_0070037_61_1035 322
101 3300046694 Ga0495649_0005735 Ga0495649_0005735_5909_6883 322
102 3300046794 Ga0495589_0018563 Ga0495589_0018563_2538_3512 322
103 3300046794 Ga0495589_0050010 Ga0495589_0050010_316_1293 322
104 3300046810 Ga0495660_0000460 Ga0495660_0000460_2513_3487 322
105 3300047323 Ga0495683_0013741 Ga0495683_0013741_1466_2440 322
106 3300047469 Ga0495673_0000025 Ga0495673_0000025_357444_358421 322
107 3300047472 Ga0495686_0058331 Ga0495686_0058331_1388_2365 322
108 3300048921 Ga0496118_0000048 Ga0496118_0000048_214071_215054 322
109 iso_pu_bacteria 2919055335 2919056682 322
110 3300002705 JGI25156J39149_1000008 JGI25156J39149_100000873 323
111 3300002738 JGI25154J39366_1000050 JGI25154J39366_100005051 323
112 3300002741 JGI25157J39369_1000028 JGI25157J39369_100002874 323
113 3300003187 JGI25151J46595_10000988 JGI25151J46595_1000098818 323
114 3300003215 JGI25153J46596_10003764 JGI25153J46596_100037648 323
115 3300003771 Ga0055526_1034377 Ga0055526_10343771 323
116 3300003775 Ga0055524_1014497 Ga0055524_10144973 323
117 3300003790 Ga0055528_1004734 Ga0055528_10047346 323
118 3300005614 Ga0068856_100054934 Ga0068856_1000549343 323
119 3300006844 Ga0075428_100001489 Ga0075428_10000148916 323
120 3300006846 Ga0075430_100049555 Ga0075430_1000495551 323
121 3300006847 Ga0075431_100541272 Ga0075431_1005412722 323
122 3300009011 Ga0105251_10000720 Ga0105251_100007208 323
123 3300009036 Ga0105244_10000771 Ga0105244_1000077125 323
124 3300009092 Ga0105250_10000105 Ga0105250_1000010536 323
125 3300009147 Ga0114129_10009485 Ga0114129_100094852 323
126 3300025206 Ga0209435_100020 Ga0209435_10002071 323
127 3300025246 Ga0209646_1000070 Ga0209646_100007071 323
128 3300025246 Ga0209646_1007840 Ga0209646_10078402 323
129 3300025250 Ga0209026_1000057 Ga0209026_1000057151 323
130 3300025256 Ga0209759_1000047 Ga0209759_1000047151 323
131 3300025273 Ga0209673_1017218 Ga0209673_10172183 323
132 3300025284 Ga0209130_1002411 Ga0209130_10024115 323
133 3300025294 Ga0209025_1000282 Ga0209025_1000282106 323
134 3300025295 Ga0209564_1024049 Ga0209564_10240493 323
135 3300025297 Ga0209758_1000974 Ga0209758_10009745 323
136 3300025297 Ga0209758_1005452 Ga0209758_10054527 323
137 3300025299 Ga0209256_1012624 Ga0209256_10126243 323
138 3300025302 Ga0207426_1000182 Ga0207426_100018260 323
139 3300025711 Ga0207696_1000131 Ga0207696_100013139 323
140 3300025728 Ga0207655_1014731 Ga0207655_10147313 323
141 3300025735 Ga0207713_1000084 Ga0207713_100008499 323
142 3300027312 Ga0209371_1001778 Ga0209371_10017786 323
143 3300030500 Ga0268256_1003379 Ga0268256_10033795 323
144 3300031616 Ga0307508_10000009 Ga0307508_100000095 323
145 3300037418 Ga0395900_0130307 Ga0395900_0130307_1552_2535 323
146 3300037471 Ga0395905_0399886 Ga0395905_0399886_127_1110 323
147 3300041496 Ga0451839_0285644 Ga0451839_0285644_144_1133 323
148 3300041512 Ga0451853_0328099 Ga0451853_0328099_1108_2097 323
149 3300044765 Ga0466970_0000392 Ga0466970_0000392_5991_6980 323
150 3300044842 Ga0466957_0001075 Ga0466957_0001075_3364_4353 323
151 3300045836 Ga0466958_0010900 Ga0466958_0010900_3595_4584 323
152 3300046460 Ga0495638_0021242 Ga0495638_0021242_1194_2183 323
153 3300046471 Ga0495650_0017653 Ga0495650_0017653_20_1009 323
154 3300046501 Ga0495607_0037240 Ga0495607_0037240_378_1367 323
155 3300046507 Ga0495606_0022229 Ga0495606_0022229_241_1230 323
156 3300046512 Ga0495610_0026516 Ga0495610_0026516_580_1575 323
157 3300046515 Ga0495620_0013426 Ga0495620_0013426_1242_2231 323
158 3300046518 Ga0495631_0047099 Ga0495631_0047099_862_1851 323
159 3300046519 Ga0495632_0019305 Ga0495632_0019305_884_1873 323
160 3300046522 Ga0495643_0031648 Ga0495643_0031648_1328_2317 323
161 3300046524 Ga0495648_0087360 Ga0495648_0087360_301_1290 323
162 3300046538 Ga0495609_0041019 Ga0495609_0041019_371_1360 323
163 3300046616 Ga0495668_0051757 Ga0495668_0051757_104_1093 323
164 3300046660 Ga0495625_0015878 Ga0495625_0015878_2465_3454 323
165 3300046665 Ga0495661_0054412 Ga0495661_0054412_113_1102 323
166 3300046810 Ga0495660_0032071 Ga0495660_0032071_599_1588 323
167 3300047472 Ga0495686_0086018 Ga0495686_0086018_547_1536 323
168 3300048091 Ga0495626_0057333 Ga0495626_0057333_374_1363 323
169 3300048921 Ga0496118_0066937 Ga0496118_0066937_262_1233 323
170 3300048927 Ga0496124_0010691 Ga0496124_0010691_7844_8839 323
171 3300048927 Ga0496124_0027046 Ga0496124_0027046_496_1488 323
172 3300048928 Ga0496125_0071443 Ga0496125_0071443_235_1227 323
173 3300048929 Ga0496126_0006497 Ga0496126_0006497_10714_11706 323
174 3300048929 Ga0496126_0032705 Ga0496126_0032705_506_1498 323
175 3300050507 nmdc:mga05p37_1331_c1 nmdc:mga05p37_1331_c1_19773_20756 323
176 3300053109 Ga0500569_002956 Ga0500569_002956_867_1856 323
177 3300053118 Ga0500594_0025792 Ga0500594_0025792_284_1273 323
178 3300053134 Ga0500658_0020805 Ga0500658_0020805_1416_2405 323
179 3300053156 Ga0500622_0004705 Ga0500622_0004705_3449_4438 323
180 3300053177 Ga0500636_0013153 Ga0500636_0013153_2533_3522 323
181 iso_pu_bacteria 2523231067 2523470484 323
182 iso_pu_bacteria 2945968032 2945969381 323
183 iso_pu_bacteria 2946080515 2946084233 323
184 3300009177 Ga0105248_10509533 Ga0105248_105095332 324
185 3300031456 Ga0307513_10088569 Ga0307513_100885694 324
186 3300039447 Ga0436361_0324518 Ga0436361_0324518_1413_2453 324
187 3300039447 Ga0436361_0957033 Ga0436361_0957033_460_1446 324
188 3300048922 Ga0496119_0000115 Ga0496119_0000115_63984_64973 324
189 3300048923 Ga0496120_0000060 Ga0496120_0000060_56256_57245 324
190 3300006946 Ga0079104_1000936 Ga0079104_100093610 325
191 3300009011 Ga0105251_10026770 Ga0105251_100267702 325
192 3300009036 Ga0105244_10092402 Ga0105244_100924022 325
193 3300009101 Ga0105247_10000103 Ga0105247_1000010378 325
194 3300011119 Ga0105246_10047822 Ga0105246_100478223 325
195 3300017792 Ga0163161_10000001 Ga0163161_10000001237 325
196 3300025711 Ga0207696_1000001 Ga0207696_1000001325 325
197 3300025735 Ga0207713_1000024 Ga0207713_1000024221 325
198 3300025900 Ga0207710_10000140 Ga0207710_1000014055 325
199 3300027111 Ga0209281_1000006 Ga0209281_1000006973 325
200 3300046453 Ga0495627_000018 Ga0495627_000018_301947_302930 325
201 3300046530 Ga0495654_0000179 Ga0495654_0000179_3950_4933 325
202 3300046794 Ga0495589_0000002 Ga0495589_0000002_357969_358952 325
203 3300048919 Ga0496116_0000023 Ga0496116_0000023_208330_209313 325
204 3300048920 Ga0496117_0000463 Ga0496117_0000463_65517_66500 325
205 3300048921 Ga0496118_0005966 Ga0496118_0005966_11923_12906 325
206 3300048922 Ga0496119_0009872 Ga0496119_0009872_175_1155 325
207 3300048923 Ga0496120_0000052 Ga0496120_0000052_184209_185189 325
208 3300031901 Ga0307406_10033012 Ga0307406_100330121 326
209 3300044658 Ga0466972_0062368 Ga0466972_0062368_28_1032 326
210 3300048927 Ga0496124_0007581 Ga0496124_0007581_4044_5039 326
211 3300049586 Ga0501070_0017930 Ga0501070_0017930_696_1691 326
212 3300061719 Ga0466962_0068786 Ga0466962_0068786_614_1618 326
213 iso_pu_bacteria 2835312727 2835320008 326
214 3300013104 Ga0157370_10005370 Ga0157370_1000537016 327
215 3300025728 Ga0207655_1000322 Ga0207655_100032248 327
216 3300046524 Ga0495648_0000364 Ga0495648_0000364_25697_26734 327
217 3300047469 Ga0495673_0000720 Ga0495673_0000720_21395_22432 327
218 3300053088 Ga0500644_0000004 Ga0500644_0000004_24875_25912 327
219 3300005347 Ga0070668_100046819 Ga0070668_1000468192 329
220 3300005364 Ga0070673_100374499 Ga0070673_1003744991 329
221 3300044765 Ga0466970_0147752 Ga0466970_0147752_189_1214 329
222 3300048920 Ga0496117_0008958 Ga0496117_0008958_5613_6668 329
223 3300048921 Ga0496118_0032960 Ga0496118_0032960_1460_2497 329
224 3300048925 Ga0496122_0043739 Ga0496122_0043739_1521_2552 329
225 3300048929 Ga0496126_0012237 Ga0496126_0012237_1302_2357 329
226 3300001979 JGI24740J21852_10035034 JGI24740J21852_100350342 330
227 3300002737 JGI25162J39368_1001704 JGI25162J39368_10017049 330
228 3300037471 Ga0395905_0007143 Ga0395905_0007143_8025_9053 330
229 3300047323 Ga0495683_0098125 Ga0495683_0098125_40_1161 330
230 3300048922 Ga0496119_0029812 Ga0496119_0029812_609_1601 330
231 3300048925 Ga0496122_0005980 Ga0496122_0005980_2246_3238 330

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00795

CN_hydrolase

Carbon-nitrogen hydrolase

48

327

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h8j-assembly2.cif.gz_P crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine 0.8996 8 308
5h8k-assembly1.cif.gz_H crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) c158s mutant 0.8952 9 309
5h8j-assembly1.cif.gz_H crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine 0.8943 8 314
5h8j-assembly1.cif.gz_H crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine 0.8848 8 314
7ovg-assembly1.cif.gz_B the c146a variant of an amidase from pyrococcus horikoshii with bound acetamide 0.8827 9 304
ID Description Score Start End Superfamily
5h8jH00 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8943 8 314 3.60.110.10
af_O59829_1_271_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8872 9 308 3.60.110.10
5h8jH00 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8848 8 314 3.60.110.10
af_O59829_1_271_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8809 9 308 3.60.110.10
af_Q2FWM9_1_261_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8736 10 303 3.60.110.10
ID Description Score Start End GO Terms
AF-A0A382N309-F1-model_v4 CN hydrolase domain-containing protein 0.9921 9 286 GO:0016811
AF-A0A382I4N6-F1-model_v4 CN hydrolase domain-containing protein 0.9906 10 272 GO:0016811
AF-A0A2D8RJ59-F1-model_v4 Acyltransferase 0.9896 10 172 GO:0016746
GO:0033388
GO:0050126
AF-A0A520MAB1-F1-model_v4 Acyltransferase 0.9891 10 322 GO:0016746
GO:0016811
AF-A0A810ZGY9-F1-model_v4 deleted 0.9846 10 147

Feature Viewer

pLDDT pTM Quality
93.15 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map