F343835

General Info

Members Datasets Scaffolds Average Seq Length
231 153 462 497

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100012233|Ga0070679_1000122338
Length 557
Sequence MSICGKHSVRLERSSQHWVRALAEDLQCAKEANCFSPAGITFEVIGWEETMPASIDANSAVLDRMQTTLRSRVLYPSLYQINTRILLGELSARLKRSATFDDIPDSYLDRLAEQGFDWIWFLGVWQTGEAGRRVSREQPDWVGEFRDVLPDLRQQDITGSCFAITNYEVNTDFGGNSVLARVRERLQRRGLKLLLDFVPNHTAPDHPWVRTHPEFYVRGTEEQLKREPQNYIRTDNSTVLAYGRDPYFAGWPDTLQLNYAEPALQRAMIQELGKVAERCDGVRCDMAMLILPDVFQRTWGMRPEPFWPRAIQSIRASNPEFIFMAEVYWDLEWTLQQQGFNYTYDKRLYDRLREGHARPVRDHLRAELDFQRKSVRFLENHDEPRAAATFSPAVHRAAAIVTFLCPGLRFFHDGEFEGRKKKLSVHLGRRPDEVRDSSLQEFYSHLLACVHRLETRDGSWRLLDCAPAWDGNWTWDCFISSSWSKQGEDRLISVVNYAPNQSQCYLQLPFDDIAGHSVKFTDLMGTAVYVRDGDQLKSKGLYLDLPPWGYHVFKVTS

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
83 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
88 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
103 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
104 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
139 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
153 2895427314 Nonomuraea sp. PA05 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 9.52
Rhizosphere 86.58
Stem 0
Stem Tuber 0
Unclassified 3.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100012233 3300005530 Bacteria 8197
2 Ga0065712_10070078 3300005290 Bacteria 6351
3 Ga0065707_10090243 3300005295 Bacteria 4182
4 Ga0070683_100009304 3300005329 Bacteria 8398
5 Ga0070683_100019088 3300005329 Bacteria 6084
6 Ga0070670_100058437 3300005331 Bacteria 3311
7 Ga0070670_100128672 3300005331 Bacteria 2186
8 Ga0070680_100029309 3300005336 Bacteria 4421
9 Ga0070669_100030377 3300005353 Bacteria 3899
10 Ga0070675_100000902 3300005354 Bacteria 21140
11 Ga0070675_100054334 3300005354 Bacteria 3295
12 Ga0070674_100015301 3300005356 Bacteria 4787
13 Ga0070674_100132036 3300005356 Bacteria 1863
14 Ga0070673_100073866 3300005364 Bacteria 2746
15 Ga0070673_100152245 3300005364 Bacteria 1960
16 Ga0070659_100017207 3300005366 Bacteria 5435
17 Ga0070713_100002008 3300005436 Bacteria 13142
18 Ga0070711_100000527 3300005439 Bacteria 19851
19 Ga0070663_100082311 3300005455 Bacteria 2368
20 Ga0070681_10028452 3300005458 Bacteria 5619
21 Ga0070681_10039779 3300005458 Bacteria 4713
22 Ga0070681_10135384 3300005458 Bacteria 2394
23 Ga0070707_100077717 3300005468 Bacteria 3203
24 Ga0070679_100092863 3300005530 Bacteria 3005
25 Ga0070684_100056773 3300005535 Bacteria 3417
26 Ga0070697_100004160 3300005536 Bacteria 11086
27 Ga0068853_100117711 3300005539 Bacteria 2367
28 Ga0070686_100095209 3300005544 Bacteria 2000
29 Ga0068856_100018401 3300005614 Bacteria 6771
30 Ga0068856_100133194 3300005614 Bacteria 2490
31 Ga0068866_10015324 3300005718 Bacteria 3403
32 Ga0068860_100232015 3300005843 Bacteria 1794
33 Ga0068862_100154611 3300005844 Bacteria 2044
34 Ga0081455_10008210 3300005937 Bacteria 10886
35 Ga0081455_10036508 3300005937 Bacteria 4375
36 Ga0081538_10007644 3300005981 Bacteria 9317
37 Ga0081540_1000028 3300005983 Bacteria 150331
38 Ga0081540_1027992 3300005983 Bacteria 3177
39 Ga0070717_10005076 3300006028 Bacteria 9599
40 Ga0070712_100000194 3300006175 Bacteria 33825
41 Ga0068871_100007200 3300006358 Bacteria 7934
42 Ga0068871_100033969 3300006358 Unclassified 4043
43 Ga0075428_100036214 3300006844 Bacteria 5436
44 Ga0075428_100103143 3300006844 Unclassified 3111
45 Ga0075430_100019309 3300006846 Bacteria 5793
46 Ga0075430_100043723 3300006846 Bacteria 3787
47 Ga0075431_100000325 3300006847 Bacteria 37691
48 Ga0075431_100001351 3300006847 Bacteria 22446
49 Ga0075431_100034171 3300006847 Bacteria 5240
50 Ga0075431_100037903 3300006847 Bacteria 4963
51 Ga0075431_100051480 3300006847 Bacteria 4246
52 Ga0075433_10087614 3300006852 Bacteria 2749
53 Ga0075429_100039471 3300006880 Bacteria 4109
54 Ga0075429_100178109 3300006880 Bacteria 1863
55 Ga0068865_100016170 3300006881 Bacteria 4768
56 Ga0099794_10021559 3300007265 Bacteria 2928
57 Ga0111539_10000146 3300009094 Bacteria 81417
58 Ga0111539_10016429 3300009094 Bacteria 9176
59 Ga0111539_10127612 3300009094 Bacteria 2979
60 Ga0111539_10152383 3300009094 Bacteria 2706
61 Ga0111539_10161755 3300009094 Bacteria 2618
62 Ga0111539_10240431 3300009094 Bacteria 2108
63 Ga0105245_10075294 3300009098 Bacteria 3073
64 Ga0105245_10157503 3300009098 Bacteria 2152
65 Ga0105245_10178258 3300009098 Bacteria 2028
66 Ga0114129_10012627 3300009147 Bacteria 12025
67 Ga0105248_10065018 3300009177 Bacteria 4094
68 Ga0105248_10178205 3300009177 Bacteria 2395
69 Ga0105239_10088472 3300010375 Bacteria 3415
70 Ga0157371_10052461 3300013102 Unclassified 2896
71 Ga0157374_10007458 3300013296 Bacteria 9329
72 Ga0157374_10020985 3300013296 Bacteria 5804
73 Ga0157378_10000555 3300013297 Bacteria 35532
74 Ga0157378_10015457 3300013297 Bacteria 6686
75 Ga0163162_10085459 3300013306 Bacteria 3232
76 Ga0157372_10103134 3300013307 Bacteria 3259
77 Ga0157375_10007529 3300013308 Bacteria 9518
78 Ga0163163_10015480 3300014325 Bacteria 7051
79 Ga0157379_10023420 3300014968 Bacteria 5480
80 Ga0157376_10000053 3300014969 Bacteria 100358
81 Ga0163161_10078362 3300017792 Bacteria 2428
82 Ga0209130_1000637 3300025284 Bacteria 32982
83 Ga0207426_1000287 3300025302 Bacteria 100566
84 Ga0207682_10007528 3300025893 Bacteria 4332
85 Ga0207645_10040173 3300025907 Bacteria 2996
86 Ga0207693_10000205 3300025915 Bacteria 54249
87 Ga0207693_10061045 3300025915 Bacteria 2953
88 Ga0207663_10003642 3300025916 Bacteria 7567
89 Ga0207652_10009531 3300025921 Bacteria 7807
90 Ga0207650_10143231 3300025925 Bacteria 1880
91 Ga0207659_10011250 3300025926 Bacteria 5649
92 Ga0207687_10033530 3300025927 Bacteria 3483
93 Ga0207700_10022404 3300025928 Bacteria 4335
94 Ga0207690_10003071 3300025932 Bacteria 10057
95 Ga0207690_10088044 3300025932 Bacteria 2186
96 Ga0207669_10008953 3300025937 Bacteria 4733
97 Ga0207669_10101697 3300025937 Bacteria 1902
98 Ga0207711_10067906 3300025941 Bacteria 3087
99 Ga0207711_10076159 3300025941 Bacteria 2921
100 Ga0207711_10292549 3300025941 Bacteria 1501
101 Ga0207661_10071966 3300025944 Bacteria 2828
102 Ga0207661_10143298 3300025944 Bacteria 2058
103 Ga0207679_10003848 3300025945 Bacteria 9307
104 Ga0207702_10056023 3300026078 Bacteria 3345
105 Ga0207674_10103229 3300026116 Bacteria 2830
106 Ga0209971_1007780 3300027682 Unclassified 2542
107 Ga0209974_10016383 3300027876 Unclassified 2461
108 Ga0207428_10004157 3300027907 Bacteria 13873
109 Ga0207428_10048096 3300027907 Bacteria 3423
110 Ga0268266_10169150 3300028379 Bacteria 1983
111 Ga0316577_10003268 3300031733 Bacteria 8167
112 Ga0307410_10015120 3300031852 Bacteria 4568
113 Ga0307409_100167298 3300031995 Bacteria 1931
114 Ga0307415_100008063 3300032126 Bacteria 5814
115 Ga0373923_0019567 3300035111 Bacteria 2623
116 Ga0373954_0003381 3300035118 Bacteria 6754
117 Ga0373956_0036544 3300035119 Bacteria 2168
118 Ga0373955_0076343 3300035172 Bacteria 1885
119 Ga0316574_0017211 3300035398 Bacteria 4226
120 Ga0373931_0000975 3300035691 Bacteria 12106
121 Ga0373933_0000889 3300035724 Bacteria 18276
122 Ga0373937_0018348 3300036401 Bacteria 6247
123 Ga0373937_0043166 3300036401 Bacteria 4115
124 Ga0373937_0116096 3300036401 Bacteria 2493
125 Ga0316582_0003807 3300036647 Bacteria 7497
126 Ga0316584_0026961 3300036712 Bacteria 4226
127 Ga0395899_0001284 3300037312 Bacteria 21770
128 Ga0436364_0091110 3300037853 Bacteria 1948
129 Ga0436365_1633121 3300039437 Bacteria 4036
130 Ga0436360_1230518 3300039438 Bacteria 5354
131 Ga0436361_0466322 3300039447 Bacteria 1932
132 Ga0436363_0188457 3300039450 Bacteria 3529
133 Ga0436363_0317712 3300039450 Bacteria 1641
134 Ga0439435_0003441 3300042436 Unclassified 3292
135 Ga0451577_0003253 3300042876 Bacteria 18264
136 Ga0451577_0041611 3300042876 Bacteria 4124
137 Ga0451577_0059490 3300042876 Bacteria 3406
138 Ga0451577_0128595 3300042876 Unclassified 2271
139 Ga0453684_0032716 3300044712 Bacteria 7267
140 Ga0453684_0049609 3300044712 Bacteria 5532
141 Ga0453684_0069578 3300044712 Unclassified 4463
142 Ga0453684_0133461 3300044712 Bacteria 2976
143 Ga0466960_0059146 3300044901 Bacteria 1874
144 Ga0451576_0000593 3300045051 Bacteria 76279
145 Ga0451576_0127759 3300045051 Bacteria 2649
146 Ga0495592_0025505 3300046454 Bacteria 4487
147 Ga0495629_0150534 3300046459 Bacteria 1617
148 Ga0495629_0161736 3300046459 Bacteria 1555
149 Ga0495641_0013198 3300046461 Bacteria 4560
150 Ga0495580_0021615 3300046472 Bacteria 4744
151 Ga0495639_0002007 3300046475 Bacteria 9012
152 Ga0495608_0000946 3300046511 Bacteria 20430
153 Ga0495610_0004382 3300046512 Bacteria 10450
154 Ga0495618_0032310 3300046514 Bacteria 3278
155 Ga0495618_0074031 3300046514 Bacteria 2169
156 Ga0495630_0002634 3300046517 Bacteria 12428
157 Ga0495630_0021269 3300046517 Bacteria 4790
158 Ga0495630_0073988 3300046517 Bacteria 2566
159 Ga0495642_0034097 3300046528 Bacteria 2049
160 Ga0495665_0041284 3300046531 Bacteria 2456
161 Ga0495586_0008245 3300046535 Bacteria 5550
162 Ga0495635_0117275 3300046663 Bacteria 1817
163 Ga0495658_0002927 3300046683 Bacteria 8568
164 Ga0495674_0009826 3300047319 Bacteria 9081
165 Ga0495680_0013210 3300047322 Bacteria 7213
166 Ga0495684_0065856 3300047471 Bacteria 2754
167 Ga0496100_0071375 3300048903 Bacteria 2318
168 Ga0496102_0009026 3300048905 Bacteria 8557
169 Ga0496102_0101819 3300048905 Bacteria 2669
170 Ga0496104_0015412 3300048907 Bacteria 6923
171 Ga0496104_0036594 3300048907 Bacteria 4590
172 Ga0496104_0071391 3300048907 Bacteria 3301
173 Ga0496104_0188117 3300048907 Bacteria 1976
174 Ga0496106_0035465 3300048909 Bacteria 3730
175 Ga0496108_0011561 3300048911 Bacteria 7178
176 Ga0496108_0049793 3300048911 Bacteria 3504
177 Ga0496109_0014902 3300048912 Bacteria 6766
178 Ga0496109_0029621 3300048912 Bacteria 4903
179 Ga0496109_0062079 3300048912 Bacteria 3417
180 Ga0496110_0119421 3300048913 Bacteria 2374
181 Ga0496111_0008567 3300048914 Bacteria 6774
182 Ga0496111_0028623 3300048914 Bacteria 3950
183 Ga0496111_0029411 3300048914 Bacteria 3903
184 Ga0496112_0006488 3300048915 Bacteria 10283
185 Ga0496112_0013147 3300048915 Bacteria 7639
186 Ga0496113_0015216 3300048916 Bacteria 5279
187 Ga0496114_0053409 3300048917 Bacteria 3368
188 Ga0496114_0119607 3300048917 Bacteria 2264
189 Ga0496126_0023705 3300048929 Bacteria 5944
190 Ga0501034_0001227 3300049571 Bacteria 35051
191 Ga0501034_0088982 3300049571 Bacteria 3085
192 Ga0501040_0039273 3300049576 Bacteria 3219
193 Ga0501040_0044254 3300049576 Bacteria 3035
194 Ga0501042_0023955 3300049578 Bacteria 4277
195 Ga0501046_0000094 3300049580 Bacteria 96222
196 Ga0501046_0015521 3300049580 Bacteria 6398
197 Ga0501068_0001428 3300049584 Bacteria 12676
198 Ga0501069_0003308 3300049585 Bacteria 8273
199 Ga0501071_0078059 3300049587 Bacteria 2420
200 Ga0501072_0051603 3300049588 Bacteria 3238
201 Ga0501075_0001408 3300049591 Bacteria 15667
202 Ga0501076_0006054 3300049592 Bacteria 8749
203 Ga0501077_0014486 3300049593 Bacteria 4956
204 Ga0501077_0048057 3300049593 Bacteria 2711
205 Ga0501079_0006825 3300049741 Bacteria 8593
206 Ga0501081_0004221 3300049743 Bacteria 9211
207 Ga0501045_0010829 3300049824 Bacteria 6392
208 nmdc:mga05p37_48309_c1 3300050507 Bacteria 5234
209 nmdc:mga05p37_52596_c1 3300050507 Bacteria 5007
210 nmdc:mga09592_163965_c1 3300050508 Bacteria 1920
211 nmdc:mga0qj67_182222_c1 3300050509 Bacteria 1706
212 nmdc:mga0qj67_28631_c1 3300050509 Bacteria 4326
213 nmdc:mga0qj67_38464_c1 3300050509 Bacteria 3753
214 nmdc:mga06r32_202442_c1 3300050510 Bacteria 1973
215 nmdc:mga06r32_3305_c1 3300050510 Bacteria 14446
216 nmdc:mga06r32_62245_c1 3300050510 Bacteria 3595
217 nmdc:mga06r32_7705_c1 3300050510 Bacteria 9684
218 nmdc:mga08y16_12033_c1 3300050511 Bacteria 9090
219 nmdc:mga08y16_175913_c1 3300050511 Bacteria 2222
220 nmdc:mga08y16_3048_c1 3300050511 Bacteria 17314
221 nmdc:mga08y16_5021_c1 3300050511 Bacteria 13832
222 Ga0495601_0008390 3300053077 Bacteria 6101
223 Ga0495601_0011835 3300053077 Bacteria 5232
224 Ga0495619_0006564 3300053085 Bacteria 7360
225 Ga0495619_0008060 3300053085 Bacteria 6668
226 Ga0501082_0004172 3300060353 Bacteria 12629
227 Ga0530510_0000414 3300061734 Bacteria 27733
228 Ga0530510_0009174 3300061734 Bacteria 6931
229 Ga0530510_0082459 3300061734 Bacteria 2342
230 2688394615 2687453341 Bacteria 6534136
231 2895430461 2895427314 Bacteria 13147766
232 Ga0070679_100012233
233 Ga0065712_10070078
234 Ga0065707_10090243
235 Ga0070683_100009304
236 Ga0070683_100019088
237 Ga0070670_100058437
238 Ga0070670_100128672
239 Ga0070680_100029309
240 Ga0070669_100030377
241 Ga0070675_100000902
242 Ga0070675_100054334
243 Ga0070674_100015301
244 Ga0070674_100132036
245 Ga0070673_100073866
246 Ga0070673_100152245
247 Ga0070659_100017207
248 Ga0070713_100002008
249 Ga0070711_100000527
250 Ga0070663_100082311
251 Ga0070681_10028452
252 Ga0070681_10039779
253 Ga0070681_10135384
254 Ga0070707_100077717
255 Ga0070679_100092863
256 Ga0070684_100056773
257 Ga0070697_100004160
258 Ga0068853_100117711
259 Ga0070686_100095209
260 Ga0068856_100018401
261 Ga0068856_100133194
262 Ga0068866_10015324
263 Ga0068860_100232015
264 Ga0068862_100154611
265 Ga0081455_10008210
266 Ga0081455_10036508
267 Ga0081538_10007644
268 Ga0081540_1000028
269 Ga0081540_1027992
270 Ga0070717_10005076
271 Ga0070712_100000194
272 Ga0068871_100007200
273 Ga0068871_100033969
274 Ga0075428_100036214
275 Ga0075428_100103143
276 Ga0075430_100019309
277 Ga0075430_100043723
278 Ga0075431_100000325
279 Ga0075431_100001351
280 Ga0075431_100034171
281 Ga0075431_100037903
282 Ga0075431_100051480
283 Ga0075433_10087614
284 Ga0075429_100039471
285 Ga0075429_100178109
286 Ga0068865_100016170
287 Ga0099794_10021559
288 Ga0111539_10000146
289 Ga0111539_10016429
290 Ga0111539_10127612
291 Ga0111539_10152383
292 Ga0111539_10161755
293 Ga0111539_10240431
294 Ga0105245_10075294
295 Ga0105245_10157503
296 Ga0105245_10178258
297 Ga0114129_10012627
298 Ga0105248_10065018
299 Ga0105248_10178205
300 Ga0105239_10088472
301 Ga0157371_10052461
302 Ga0157374_10007458
303 Ga0157374_10020985
304 Ga0157378_10000555
305 Ga0157378_10015457
306 Ga0163162_10085459
307 Ga0157372_10103134
308 Ga0157375_10007529
309 Ga0163163_10015480
310 Ga0157379_10023420
311 Ga0157376_10000053
312 Ga0163161_10078362
313 Ga0209130_1000637
314 Ga0207426_1000287
315 Ga0207682_10007528
316 Ga0207645_10040173
317 Ga0207693_10000205
318 Ga0207693_10061045
319 Ga0207663_10003642
320 Ga0207652_10009531
321 Ga0207650_10143231
322 Ga0207659_10011250
323 Ga0207687_10033530
324 Ga0207700_10022404
325 Ga0207690_10003071
326 Ga0207690_10088044
327 Ga0207669_10008953
328 Ga0207669_10101697
329 Ga0207711_10067906
330 Ga0207711_10076159
331 Ga0207711_10292549
332 Ga0207661_10071966
333 Ga0207661_10143298
334 Ga0207679_10003848
335 Ga0207702_10056023
336 Ga0207674_10103229
337 Ga0209971_1007780
338 Ga0209974_10016383
339 Ga0207428_10004157
340 Ga0207428_10048096
341 Ga0268266_10169150
342 Ga0316577_10003268
343 Ga0307410_10015120
344 Ga0307409_100167298
345 Ga0307415_100008063
346 Ga0373923_0019567
347 Ga0373954_0003381
348 Ga0373956_0036544
349 Ga0373955_0076343
350 Ga0316574_0017211
351 Ga0373931_0000975
352 Ga0373933_0000889
353 Ga0373937_0018348
354 Ga0373937_0043166
355 Ga0373937_0116096
356 Ga0316582_0003807
357 Ga0316584_0026961
358 Ga0395899_0001284
359 Ga0436364_0091110
360 Ga0436365_1633121
361 Ga0436360_1230518
362 Ga0436361_0466322
363 Ga0436363_0188457
364 Ga0436363_0317712
365 Ga0439435_0003441
366 Ga0451577_0003253
367 Ga0451577_0041611
368 Ga0451577_0059490
369 Ga0451577_0128595
370 Ga0453684_0032716
371 Ga0453684_0049609
372 Ga0453684_0069578
373 Ga0453684_0133461
374 Ga0466960_0059146
375 Ga0451576_0000593
376 Ga0451576_0127759
377 Ga0495592_0025505
378 Ga0495629_0150534
379 Ga0495629_0161736
380 Ga0495641_0013198
381 Ga0495580_0021615
382 Ga0495639_0002007
383 Ga0495608_0000946
384 Ga0495610_0004382
385 Ga0495618_0032310
386 Ga0495618_0074031
387 Ga0495630_0002634
388 Ga0495630_0021269
389 Ga0495630_0073988
390 Ga0495642_0034097
391 Ga0495665_0041284
392 Ga0495586_0008245
393 Ga0495635_0117275
394 Ga0495658_0002927
395 Ga0495674_0009826
396 Ga0495680_0013210
397 Ga0495684_0065856
398 Ga0496100_0071375
399 Ga0496102_0009026
400 Ga0496102_0101819
401 Ga0496104_0015412
402 Ga0496104_0036594
403 Ga0496104_0071391
404 Ga0496104_0188117
405 Ga0496106_0035465
406 Ga0496108_0011561
407 Ga0496108_0049793
408 Ga0496109_0014902
409 Ga0496109_0029621
410 Ga0496109_0062079
411 Ga0496110_0119421
412 Ga0496111_0008567
413 Ga0496111_0028623
414 Ga0496111_0029411
415 Ga0496112_0006488
416 Ga0496112_0013147
417 Ga0496113_0015216
418 Ga0496114_0053409
419 Ga0496114_0119607
420 Ga0496126_0023705
421 Ga0501034_0001227
422 Ga0501034_0088982
423 Ga0501040_0039273
424 Ga0501040_0044254
425 Ga0501042_0023955
426 Ga0501046_0000094
427 Ga0501046_0015521
428 Ga0501068_0001428
429 Ga0501069_0003308
430 Ga0501071_0078059
431 Ga0501072_0051603
432 Ga0501075_0001408
433 Ga0501076_0006054
434 Ga0501077_0014486
435 Ga0501077_0048057
436 Ga0501079_0006825
437 Ga0501081_0004221
438 Ga0501045_0010829
439 nmdc:mga05p37_48309_c1
440 nmdc:mga05p37_52596_c1
441 nmdc:mga09592_163965_c1
442 nmdc:mga0qj67_182222_c1
443 nmdc:mga0qj67_28631_c1
444 nmdc:mga0qj67_38464_c1
445 nmdc:mga06r32_202442_c1
446 nmdc:mga06r32_3305_c1
447 nmdc:mga06r32_62245_c1
448 nmdc:mga06r32_7705_c1
449 nmdc:mga08y16_12033_c1
450 nmdc:mga08y16_175913_c1
451 nmdc:mga08y16_3048_c1
452 nmdc:mga08y16_5021_c1
453 Ga0495601_0008390
454 Ga0495601_0011835
455 Ga0495619_0006564
456 Ga0495619_0008060
457 Ga0501082_0004172
458 Ga0530510_0000414
459 Ga0530510_0009174
460 Ga0530510_0082459
461 2688394615
462 2895430461

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

108

422

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gkl-assembly1.cif.gz_A crystal structure of a noncanonic maltogenic alpha-amylase amyb from thermotoga neapolitana 0.8192 6 489
4gkl-assembly2.cif.gz_B crystal structure of a noncanonic maltogenic alpha-amylase amyb from thermotoga neapolitana 0.8146 6 485
4gkl-assembly1.cif.gz_A crystal structure of a noncanonic maltogenic alpha-amylase amyb from thermotoga neapolitana 0.812 6 489
4gkl-assembly2.cif.gz_B crystal structure of a noncanonic maltogenic alpha-amylase amyb from thermotoga neapolitana 0.8003 6 485
3dhu-assembly4.cif.gz_D crystal structure of an alpha-amylase from lactobacillus plantarum 0.768 6 485
ID Description Score Start End Superfamily
af_Q54MA4_34_419_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9507 11 384 3.20.20.80
af_Q54MA4_34_419_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9194 11 384 3.20.20.80
af_Q54MA4_422_517_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.8667 389 485 2.60.40.1180
af_Q54MA4_422_517_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.85 389 485 2.60.40.1180
af_P9WQ19_501_601_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.8241 390 489 2.60.40.1180
ID Description Score Start End GO Terms
AF-A0A3D3CVI9-F1-model_v4 Alpha-amylase 0.9947 5 417 GO:0005975
GO:0016740
AF-A0A3N1JVC9-F1-model_v4 deleted 0.9943 2 489
AF-A0A142X168-F1-model_v4 Maltodextrin glucosidase 0.9931 4 488 GO:0005975
GO:0016740
AF-A0A2T4U1L2-F1-model_v4 Alpha-amylase 0.9917 1 489 GO:0005975
GO:0016740
AF-A0A3N1JVC9-F1-model_v4 deleted 0.9902 2 489

Map