F343199

General Info

Members Datasets Scaffolds Average Seq Length
230 145 222 286

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0040360|Ga0316574_0040360_1468_2493
Length 341
Sequence MPKRRSPKPRPRRVEPPKLAPLVSRRKLLLAAAVGVPGGLLVFSRKNADVALDPEIAEPTAARAREVERIVASSATTDGAGVHLKRAIGSRTLNVLDPFLLLDEFQSDDPNDYIAGFPNHPHRGFETVTYMIHGAMEHRDSVGNHGHLGPGSAQWMTAGSGIIHSEMPKQERGLMWGYQLWVNLPARRKLIRPRYQDIAPARIPELAHEGAQVRVVAGTVLGRTGPVNGIDVEPVFVDVALDQGAAFHQPLPAEHASFAYVVRGSVKLGPSKRLVRQGELAVLSGGELCSAFSGKEGGRFLLLAGRPLHEPVARSGPFVMNTDAEIRQAWQDYRSGRLIQG

Samples

Sample ID Description Type Environment
1 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
2 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
3 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
4 2738541337 Pelomonas sp. BT06 Isolate Unclassified
5 2831864461 Roseateles noduli HZ7 Isolate Nodule
6 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
7 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
8 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
9 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
10 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
40 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
72 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
73 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
74 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
78 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
79 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
83 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
84 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
85 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
86 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
89 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
96 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
97 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
98 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
109 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
113 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
114 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
115 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
119 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
120 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
131 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
132 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
133 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
137 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
144 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.39
Metatranscriptomes 9.13
Isolates 3.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.57
Nodule 0.43
Rhizoplane 0
Rhizosphere 86.52
Stem 0
Stem Tuber 0
Unclassified 3.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1002109 3300001915 Bacteria 5311
2 JGI24740J21852_10004307 3300001979 Bacteria 6132
3 rootH1_10003266 3300003316 Bacteria 13926
4 rootL2_10001197 3300003322 Bacteria 28486
5 Ga0055526_1005624 3300003771 Bacteria 7137
6 Ga0055524_1003641 3300003775 Bacteria 7402
7 Ga0055531_10000001 3300003794 Bacteria 543586
8 Ga0055531_10007093 3300003794 Bacteria 6192
9 Ga0070680_100004818 3300005336 Bacteria 10160
10 Ga0070691_10002609 3300005341 Bacteria 8044
11 Ga0070679_100324050 3300005530 Bacteria 1490
12 Ga0070696_100042658 3300005546 Bacteria 3135
13 Ga0068859_100312274 3300005617 Bacteria 1666
14 Ga0081455_10012369 3300005937 Bacteria 8516
15 Ga0075363_100207369 3300006048 Bacteria 1121
16 Ga0075366_10033594 3300006195 Bacteria 3022
17 Ga0075370_10038071 3300006353 Bacteria 2706
18 Ga0097620_100312296 3300006931 Bacteria 1666
19 Ga0099794_10036432 3300007265 Bacteria 2326
20 Ga0105240_10017418 3300009093 Bacteria 9682
21 Ga0111539_10387475 3300009094 Bacteria 1627
22 Ga0105237_10310880 3300009545 Bacteria 1579
23 Ga0105238_10012204 3300009551 Bacteria 8661
24 Ga0157319_1000053 3300012497 Bacteria 12607
25 Ga0157370_10052747 3300013104 Bacteria 3882
26 Ga0157372_10008583 3300013307 Bacteria 10858
27 Ga0157372_10520487 3300013307 Bacteria 1387
28 Ga0197907_10533036 3300020069 Bacteria 2848
29 Ga0197907_10688011 3300020069 Bacteria 2269
30 Ga0206356_10853642 3300020070 Bacteria 3756
31 Ga0206356_11103418 3300020070 Bacteria 11931
32 Ga0206356_11470998 3300020070 Bacteria 1178
33 Ga0206350_10959874 3300020080 Bacteria 1413
34 Ga0206354_10223456 3300020081 Bacteria 7906
35 Ga0206353_10191156 3300020082 Bacteria 1888
36 Ga0206353_10655838 3300020082 Bacteria 9142
37 Ga0213872_10000031 3300021361 Bacteria 139321
38 Ga0213872_10000037 3300021361 Bacteria 125032
39 Ga0213872_10000107 3300021361 Bacteria 77234
40 Ga0213872_10001731 3300021361 Bacteria 13713
41 Ga0213872_10039175 3300021361 Bacteria 2163
42 Ga0224712_10093022 3300022467 Bacteria 1266
43 Ga0224712_10133158 3300022467 Bacteria 1087
44 Ga0209673_1012437 3300025273 Bacteria 3427
45 Ga0209564_1000008 3300025295 Bacteria 953227
46 Ga0209050_1001427 3300025298 Bacteria 25782
47 Ga0209256_1000811 3300025299 Bacteria 39987
48 Ga0209051_1015749 3300025303 Bacteria 3464
49 Ga0209257_1000033 3300025304 Bacteria 671006
50 Ga0209257_1003459 3300025304 Bacteria 13506
51 Ga0209257_1010307 3300025304 Bacteria 4756
52 Ga0207647_10001848 3300025904 Bacteria 16250
53 Ga0207647_10004008 3300025904 Bacteria 10988
54 Ga0207705_10000029 3300025909 Bacteria 239897
55 Ga0207705_10013413 3300025909 Bacteria 5912
56 Ga0207705_10046467 3300025909 Bacteria 3120
57 Ga0207707_10000144 3300025912 Bacteria 73715
58 Ga0207707_10001056 3300025912 Bacteria 26434
59 Ga0207707_10002603 3300025912 Bacteria 16153
60 Ga0207695_10008505 3300025913 Bacteria 12833
61 Ga0207695_10028641 3300025913 Bacteria 6169
62 Ga0207660_10008289 3300025917 Bacteria 6715
63 Ga0207660_10011764 3300025917 Bacteria 5705
64 Ga0207660_10027447 3300025917 Bacteria 3885
65 Ga0207660_10160859 3300025917 Bacteria 1732
66 Ga0207657_10011700 3300025919 Bacteria 8695
67 Ga0207657_10039680 3300025919 Bacteria 4182
68 Ga0207649_10001148 3300025920 Bacteria 15999
69 Ga0207649_10011637 3300025920 Bacteria 4859
70 Ga0207652_10000082 3300025921 Bacteria 103057
71 Ga0207652_10000808 3300025921 Bacteria 29892
72 Ga0207652_10003445 3300025921 Bacteria 13048
73 Ga0207652_10006678 3300025921 Bacteria 9296
74 Ga0207652_10250003 3300025921 Bacteria 1599
75 Ga0207690_10000403 3300025932 Bacteria 28565
76 Ga0207690_10106994 3300025932 Bacteria 2008
77 Ga0207706_10016786 3300025933 Bacteria 6608
78 Ga0207661_10007956 3300025944 Bacteria 7558
79 Ga0207661_10013219 3300025944 Bacteria 6028
80 Ga0207679_10029481 3300025945 Bacteria 3821
81 Ga0207667_10000075 3300025949 Bacteria 169836
82 Ga0207667_10001949 3300025949 Bacteria 25858
83 Ga0207667_10021238 3300025949 Bacteria 7197
84 Ga0207640_10000755 3300025981 Bacteria 18494
85 Ga0207640_10015866 3300025981 Bacteria 4370
86 Ga0207640_10040905 3300025981 Bacteria 2945
87 Ga0207658_10207521 3300025986 Bacteria 1640
88 Ga0207639_10002663 3300026041 Bacteria 11983
89 Ga0207639_10048281 3300026041 Bacteria 3221
90 Ga0207678_10005658 3300026067 Bacteria 11170
91 Ga0207678_10031573 3300026067 Bacteria 4620
92 Ga0207678_10038303 3300026067 Bacteria 4166
93 Ga0207702_10001306 3300026078 Bacteria 24963
94 Ga0207702_10015126 3300026078 Bacteria 6398
95 Ga0207702_10038690 3300026078 Bacteria 3994
96 Ga0207674_10003998 3300026116 Bacteria 17911
97 Ga0207698_10001298 3300026142 Bacteria 14570
98 Ga0207698_10011509 3300026142 Bacteria 5739
99 Ga0307515_10000291 3300028794 Bacteria 123206
100 Ga0307515_10066207 3300028794 Bacteria 5010
101 Ga0265328_10003433 3300031239 Bacteria 6997
102 Ga0265327_10000080 3300031251 Bacteria 206086
103 Ga0307408_100000016 3300031548 Bacteria 356896
104 Ga0307408_100138200 3300031548 Bacteria 1909
105 Ga0307408_100218022 3300031548 Bacteria 1555
106 Ga0316575_10007057 3300031665 Bacteria 4064
107 Ga0316579_10000076 3300031691 Bacteria 24968
108 Ga0316579_10001850 3300031691 Bacteria 7830
109 Ga0316579_10035593 3300031691 Bacteria 2295
110 Ga0316578_10015815 3300031728 Bacteria 4068
111 Ga0316578_10232123 3300031728 Bacteria 1108
112 Ga0316577_10027195 3300031733 Bacteria 3189
113 Ga0316577_10032174 3300031733 Bacteria 2930
114 Ga0307414_10022222 3300032004 Bacteria 3997
115 Ga0307411_10007222 3300032005 Bacteria 5634
116 Ga0316583_10005169 3300032133 Bacteria 4679
117 Ga0316583_10007868 3300032133 Bacteria 3843
118 Ga0316583_10011033 3300032133 Bacteria 3255
119 Ga0316585_10024428 3300032137 Bacteria 1870
120 Ga0316593_10038273 3300032168 Bacteria 1587
121 Ga0316593_10068645 3300032168 Bacteria 1223
122 Ga0316587_1004430 3300033529 Bacteria 2046
123 Ga0316596_1010162 3300033541 Bacteria 2272
124 Ga0316596_1046742 3300033541 Bacteria 1144
125 Ga0373952_0000949 3300035092 Bacteria 5252
126 Ga0373939_0000185 3300035114 Bacteria 17301
127 Ga0373960_0002090 3300035121 Bacteria 4494
128 Ga0373960_0009701 3300035121 Bacteria 2340
129 Ga0373942_0011968 3300035207 Bacteria 2065
130 Ga0316574_0019087 3300035398 Bacteria 4041
131 Ga0316574_0026084 3300035398 Bacteria 3513
132 Ga0316574_0032893 3300035398 Bacteria 3155
133 Ga0316574_0040360 3300035398 Bacteria 2874
134 Ga0373931_0001264 3300035691 Bacteria 10807
135 Ga0316582_0008602 3300036647 Bacteria 5493
136 Ga0316582_0019351 3300036647 Bacteria 3983
137 Ga0316582_0026681 3300036647 Bacteria 3480
138 Ga0316582_0030073 3300036647 Bacteria 3305
139 Ga0316582_0092972 3300036647 Bacteria 1988
140 Ga0316584_0001131 3300036712 Bacteria 15666
141 Ga0316584_0004466 3300036712 Bacteria 9257
142 Ga0316584_0004935 3300036712 Bacteria 8879
143 Ga0316584_0047598 3300036712 Bacteria 3203
144 Ga0316584_0074270 3300036712 Bacteria 2549
145 Ga0316584_0129005 3300036712 Bacteria 1888
146 Ga0395898_0155253 3300037466 Bacteria 2189
147 Ga0395905_0000782 3300037471 Bacteria 41773
148 Ga0316581_0004075 3300037588 Bacteria 3694
149 Ga0316581_0013733 3300037588 Bacteria 2300
150 Ga0395901_0104769 3300038443 Bacteria 2968
151 Ga0436361_0315970 3300039447 Bacteria 2857
152 Ga0436361_0401075 3300039447 Bacteria 45979
153 Ga0436361_0403255 3300039447 Bacteria 13044
154 Ga0436361_0807409 3300039447 Bacteria 14539
155 Ga0436361_0941839 3300039447 Bacteria 174965
156 Ga0436361_1001274 3300039447 Bacteria 22690
157 Ga0450890_001567 3300042127 Bacteria 3288
158 Ga0450892_000865 3300042130 Bacteria 3298
159 Ga0450902_015170 3300042137 Bacteria 1249
160 Ga0439459_0000278 3300042438 Bacteria 6032
161 Ga0451577_0019397 3300042876 Bacteria 6254
162 Ga0451577_0264042 3300042876 Bacteria 1559
163 Ga0453683_0212594 3300044673 Bacteria 1229
164 Ga0453684_0000298 3300044712 Bacteria 209777
165 Ga0453684_0018778 3300044712 Bacteria 10582
166 Ga0451576_0000033 3300045051 Bacteria 393131
167 Ga0451576_0274786 3300045051 Bacteria 1761
168 Ga0495603_0013364 3300046455 Bacteria 4967
169 Ga0495591_057840 3300046458 Bacteria 1038
170 Ga0495606_0002787 3300046507 Bacteria 19522
171 Ga0495643_0052275 3300046522 Bacteria 2194
172 Ga0495654_0000097 3300046530 Bacteria 99414
173 Ga0495654_0001904 3300046530 Bacteria 13862
174 Ga0495597_0047595 3300046542 Bacteria 1898
175 Ga0495670_0001307 3300046691 Bacteria 12129
176 Ga0495671_0013979 3300046692 Bacteria 4329
177 Ga0495649_0001259 3300046694 Bacteria 19496
178 Ga0495660_0000089 3300046810 Bacteria 98880
179 Ga0495673_0000718 3300047469 Bacteria 32099
180 Ga0495626_0003257 3300048091 Bacteria 10502
181 Ga0501309_000850 3300049129 Bacteria 2721
182 Ga0501310_001076 3300049130 Bacteria 2461
183 Ga0501305_001334 3300049161 Bacteria 2384
184 Ga0495682_0000156 3300049460 Bacteria 57409
185 Ga0501300_011941 3300049523 Bacteria 1265
186 Ga0501312_000835 3300049528 Bacteria 2741
187 Ga0501314_000553 3300049530 Bacteria 2354
188 Ga0501037_0075546 3300049573 Bacteria 2447
189 Ga0501038_0003650 3300049574 Bacteria 14341
190 Ga0501068_0074186 3300049584 Bacteria 2079
191 Ga0501069_0002572 3300049585 Bacteria 9263
192 Ga0501069_0032126 3300049585 Bacteria 2889
193 Ga0501070_0008196 3300049586 Bacteria 8836
194 Ga0501070_0023300 3300049586 Bacteria 5186
195 Ga0501070_0138601 3300049586 Bacteria 2009
196 Ga0501070_0230201 3300049586 Bacteria 1518
197 Ga0501071_0090683 3300049587 Bacteria 2244
198 Ga0501073_0080123 3300049589 Bacteria 2272
199 Ga0501077_0219707 3300049593 Bacteria 1208
200 Ga0501206_015395 3300049653 Bacteria 1058
201 Ga0501227_010609 3300049665 Bacteria 1999
202 Ga0501235_001442 3300049669 Bacteria 5076
203 Ga0501221_004812 3300049704 Bacteria 2245
204 Ga0501080_0062823 3300049742 Bacteria 3456
205 Ga0501080_0144437 3300049742 Bacteria 2199
206 Ga0501083_0012868 3300049744 Bacteria 5852
207 Ga0501264_002196 3300049761 Bacteria 1850
208 Ga0501272_002409 3300049769 Bacteria 1850
209 Ga0501035_0020881 3300049822 Bacteria 6018
210 Ga0501035_0137825 3300049822 Bacteria 2123
211 Ga0501044_0029354 3300049823 Bacteria 5799
212 Ga0501044_0512821 3300049823 Bacteria 1099
213 nmdc:mga0k408_168128_c1 3300050493 Bacteria 1307
214 nmdc:mga0k408_19370_c1 3300050493 Bacteria 3802
215 nmdc:mga0k408_26612_c1 3300050493 Bacteria 3280
216 nmdc:mga0k408_57959_c1 3300050493 Bacteria 2249
217 nmdc:mga07m45_14185_c1 3300050496 Bacteria 4240
218 nmdc:mga08y16_6176_c1 3300050511 Bacteria 12573
219 Ga0500618_000373 3300053125 Bacteria 30954
220 Ga0500622_0005011 3300053156 Bacteria 8068
221 Ga0501082_0019542 3300060353 Bacteria 5842
222 Ga0501082_0075312 3300060353 Bacteria 2908

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009551 Ga0105238_10012204 Ga0105238_100122047 262
2 3300050511 nmdc:mga08y16_6176_c1 nmdc:mga08y16_6176_c1_11648_12481 264
3 3300035398 Ga0316574_0032893 Ga0316574_0032893_1041_1874 267
4 3300035092 Ga0373952_0000949 Ga0373952_0000949_1442_2299 269
5 3300035121 Ga0373960_0009701 Ga0373960_0009701_55_912 269
6 3300035207 Ga0373942_0011968 Ga0373942_0011968_414_1271 269
7 3300049742 Ga0501080_0062823 Ga0501080_0062823_1221_2111 269
8 3300049744 Ga0501083_0012868 Ga0501083_0012868_1690_2580 269
9 3300060353 Ga0501082_0019542 Ga0501082_0019542_2461_3351 269
10 3300006195 Ga0075366_10033594 Ga0075366_100335944 270
11 3300050493 nmdc:mga0k408_26612_c1 nmdc:mga0k408_26612_c1_516_1397 270
12 3300049665 Ga0501227_010609 Ga0501227_010609_49_906 272
13 3300006048 Ga0075363_100207369 Ga0075363_1002073691 274
14 3300031665 Ga0316575_10007057 Ga0316575_100070572 274
15 3300031691 Ga0316579_10000076 Ga0316579_100000763 274
16 3300031691 Ga0316579_10001850 Ga0316579_1000185010 274
17 3300031691 Ga0316579_10035593 Ga0316579_100355934 274
18 3300031728 Ga0316578_10015815 Ga0316578_100158152 274
19 3300031728 Ga0316578_10232123 Ga0316578_102321232 274
20 3300031733 Ga0316577_10027195 Ga0316577_100271954 274
21 3300031733 Ga0316577_10032174 Ga0316577_100321743 274
22 3300032133 Ga0316583_10005169 Ga0316583_100051693 274
23 3300032133 Ga0316583_10007868 Ga0316583_100078683 274
24 3300032133 Ga0316583_10011033 Ga0316583_100110332 274
25 3300032137 Ga0316585_10024428 Ga0316585_100244282 274
26 3300032168 Ga0316593_10038273 Ga0316593_100382732 274
27 3300032168 Ga0316593_10068645 Ga0316593_100686452 274
28 3300033529 Ga0316587_1004430 Ga0316587_10044301 274
29 3300033541 Ga0316596_1010162 Ga0316596_10101621 274
30 3300033541 Ga0316596_1046742 Ga0316596_10467421 274
31 3300035398 Ga0316574_0019087 Ga0316574_0019087_731_1588 274
32 3300036647 Ga0316582_0008602 Ga0316582_0008602_288_1145 274
33 3300036647 Ga0316582_0019351 Ga0316582_0019351_2658_3515 274
34 3300036647 Ga0316582_0026681 Ga0316582_0026681_102_959 274
35 3300036647 Ga0316582_0030073 Ga0316582_0030073_1924_2781 274
36 3300036647 Ga0316582_0092972 Ga0316582_0092972_1014_1871 274
37 3300036712 Ga0316584_0001131 Ga0316584_0001131_7599_8456 274
38 3300036712 Ga0316584_0004466 Ga0316584_0004466_4319_5176 274
39 3300036712 Ga0316584_0004935 Ga0316584_0004935_4255_5112 274
40 3300036712 Ga0316584_0047598 Ga0316584_0047598_343_1200 274
41 3300036712 Ga0316584_0074270 Ga0316584_0074270_1546_2403 274
42 3300036712 Ga0316584_0129005 Ga0316584_0129005_196_1053 274
43 3300037588 Ga0316581_0004075 Ga0316581_0004075_806_1663 274
44 3300037588 Ga0316581_0013733 Ga0316581_0013733_773_1630 274
45 3300050493 nmdc:mga0k408_57959_c1 nmdc:mga0k408_57959_c1_578_1447 274
46 3300007265 Ga0099794_10036432 Ga0099794_100364323 275
47 3300028794 Ga0307515_10000291 Ga0307515_1000029147 275
48 3300042876 Ga0451577_0019397 Ga0451577_0019397_964_1863 275
49 3300042876 Ga0451577_0264042 Ga0451577_0264042_436_1299 275
50 3300046455 Ga0495603_0013364 Ga0495603_0013364_3333_4193 275
51 3300046458 Ga0495591_057840 Ga0495591_057840_73_933 275
52 3300046507 Ga0495606_0002787 Ga0495606_0002787_7512_8372 275
53 3300046522 Ga0495643_0052275 Ga0495643_0052275_1057_1917 275
54 3300046530 Ga0495654_0000097 Ga0495654_0000097_58693_59553 275
55 3300046530 Ga0495654_0001904 Ga0495654_0001904_4411_5268 275
56 3300046542 Ga0495597_0047595 Ga0495597_0047595_201_1061 275
57 3300046691 Ga0495670_0001307 Ga0495670_0001307_8635_9492 275
58 3300046692 Ga0495671_0013979 Ga0495671_0013979_3216_4076 275
59 3300046694 Ga0495649_0001259 Ga0495649_0001259_10805_11665 275
60 3300046810 Ga0495660_0000089 Ga0495660_0000089_39214_40074 275
61 3300047469 Ga0495673_0000718 Ga0495673_0000718_4138_4998 275
62 3300048091 Ga0495626_0003257 Ga0495626_0003257_6613_7470 275
63 3300049460 Ga0495682_0000156 Ga0495682_0000156_9842_10702 275
64 3300049822 Ga0501035_0137825 Ga0501035_0137825_820_1683 275
65 3300053125 Ga0500618_000373 Ga0500618_000373_29450_30310 275
66 3300060353 Ga0501082_0075312 Ga0501082_0075312_1734_2573 275
67 3300003316 rootH1_10003266 rootH1_100032664 276
68 3300003322 rootL2_10001197 rootL2_100011975 276
69 3300003771 Ga0055526_1005624 Ga0055526_10056246 276
70 3300003775 Ga0055524_1003641 Ga0055524_10036416 276
71 3300003794 Ga0055531_10000001 Ga0055531_10000001276 276
72 3300003794 Ga0055531_10007093 Ga0055531_100070932 276
73 3300005937 Ga0081455_10012369 Ga0081455_100123697 276
74 3300006353 Ga0075370_10038071 Ga0075370_100380712 276
75 3300009093 Ga0105240_10017418 Ga0105240_100174186 276
76 3300009094 Ga0111539_10387475 Ga0111539_103874752 276
77 3300009545 Ga0105237_10310880 Ga0105237_103108801 276
78 3300012497 Ga0157319_1000053 Ga0157319_100005311 276
79 3300021361 Ga0213872_10000031 Ga0213872_1000003134 276
80 3300021361 Ga0213872_10000037 Ga0213872_1000003748 276
81 3300021361 Ga0213872_10000107 Ga0213872_1000010750 276
82 3300021361 Ga0213872_10001731 Ga0213872_100017313 276
83 3300021361 Ga0213872_10039175 Ga0213872_100391752 276
84 3300025273 Ga0209673_1012437 Ga0209673_10124373 276
85 3300025295 Ga0209564_1000008 Ga0209564_1000008155 276
86 3300025298 Ga0209050_1001427 Ga0209050_100142714 276
87 3300025299 Ga0209256_1000811 Ga0209256_10008118 276
88 3300025303 Ga0209051_1015749 Ga0209051_10157493 276
89 3300025304 Ga0209257_1000033 Ga0209257_1000033363 276
90 3300025304 Ga0209257_1003459 Ga0209257_10034595 276
91 3300025304 Ga0209257_1010307 Ga0209257_10103075 276
92 3300026078 Ga0207702_10038690 Ga0207702_100386902 276
93 3300028794 Ga0307515_10066207 Ga0307515_100662074 276
94 3300031239 Ga0265328_10003433 Ga0265328_100034332 276
95 3300031251 Ga0265327_10000080 Ga0265327_10000080136 276
96 3300031548 Ga0307408_100000016 Ga0307408_100000016241 276
97 3300031548 Ga0307408_100218022 Ga0307408_1002180222 276
98 3300032004 Ga0307414_10022222 Ga0307414_100222222 276
99 3300032005 Ga0307411_10007222 Ga0307411_100072224 276
100 3300035114 Ga0373939_0000185 Ga0373939_0000185_11918_12787 276
101 3300035121 Ga0373960_0002090 Ga0373960_0002090_80_949 276
102 3300035398 Ga0316574_0026084 Ga0316574_0026084_2033_2878 276
103 3300035398 Ga0316574_0040360 Ga0316574_0040360_1468_2493 276
104 3300035691 Ga0373931_0001264 Ga0373931_0001264_89_958 276
105 3300037471 Ga0395905_0000782 Ga0395905_0000782_19062_19931 276
106 3300039447 Ga0436361_0315970 Ga0436361_0315970_768_1634 276
107 3300039447 Ga0436361_0401075 Ga0436361_0401075_143_1015 276
108 3300039447 Ga0436361_0403255 Ga0436361_0403255_10635_11501 276
109 3300039447 Ga0436361_0807409 Ga0436361_0807409_12737_13609 276
110 3300039447 Ga0436361_0941839 Ga0436361_0941839_113068_113940 276
111 3300039447 Ga0436361_1001274 Ga0436361_1001274_10449_11303 276
112 3300042127 Ga0450890_001567 Ga0450890_001567_1554_2516 276
113 3300042130 Ga0450892_000865 Ga0450892_000865_1589_2458 276
114 3300042137 Ga0450902_015170 Ga0450902_015170_90_959 276
115 3300042438 Ga0439459_0000278 Ga0439459_0000278_2606_3478 276
116 3300044712 Ga0453684_0018778 Ga0453684_0018778_3725_4687 276
117 3300045051 Ga0451576_0274786 Ga0451576_0274786_547_1416 276
118 3300049129 Ga0501309_000850 Ga0501309_000850_775_1644 276
119 3300049130 Ga0501310_001076 Ga0501310_001076_427_1296 276
120 3300049161 Ga0501305_001334 Ga0501305_001334_1028_1897 276
121 3300049523 Ga0501300_011941 Ga0501300_011941_320_1189 276
122 3300049528 Ga0501312_000835 Ga0501312_000835_774_1643 276
123 3300049530 Ga0501314_000553 Ga0501314_000553_712_1581 276
124 3300049653 Ga0501206_015395 Ga0501206_015395_135_1004 276
125 3300049669 Ga0501235_001442 Ga0501235_001442_1632_2501 276
126 3300049704 Ga0501221_004812 Ga0501221_004812_565_1434 276
127 3300049761 Ga0501264_002196 Ga0501264_002196_63_932 276
128 3300049769 Ga0501272_002409 Ga0501272_002409_434_1303 276
129 3300050493 nmdc:mga0k408_168128_c1 nmdc:mga0k408_168128_c1_121_993 276
130 3300050493 nmdc:mga0k408_19370_c1 nmdc:mga0k408_19370_c1_2904_3773 276
131 3300050496 nmdc:mga07m45_14185_c1 nmdc:mga07m45_14185_c1_2571_3440 276
132 3300053156 Ga0500622_0005011 Ga0500622_0005011_7117_7989 276
133 iso_pu_bacteria 2643221544 2643743392 276
134 iso_pu_bacteria 2643221639 2644218138 276
135 iso_pu_bacteria 2643221646 2644260840 276
136 iso_pu_bacteria 2738541337 2739056313 276
137 iso_pu_bacteria 2831864461 2831864520 276
138 iso_pu_bacteria 2883291878 2883295097 276
139 iso_pu_bacteria 2883354860 2883356435 276
140 iso_pu_bacteria 2886848708 2886854076 276
141 3300022467 Ga0224712_10133158 Ga0224712_101331581 277
142 3300031548 Ga0307408_100138200 Ga0307408_1001382002 277
143 3300044712 Ga0453684_0000298 Ga0453684_0000298_40814_41692 277
144 3300045051 Ga0451576_0000033 Ga0451576_0000033_351440_352318 277
145 3300049574 Ga0501038_0003650 Ga0501038_0003650_2876_3736 277
146 3300049586 Ga0501070_0023300 Ga0501070_0023300_4281_5141 277
147 3300001915 JGI24741J21665_1002109 JGI24741J21665_10021096 279
148 3300001979 JGI24740J21852_10004307 JGI24740J21852_100043077 279
149 3300005336 Ga0070680_100004818 Ga0070680_1000048187 279
150 3300005341 Ga0070691_10002609 Ga0070691_100026093 279
151 3300005530 Ga0070679_100324050 Ga0070679_1003240502 279
152 3300005546 Ga0070696_100042658 Ga0070696_1000426583 279
153 3300005617 Ga0068859_100312274 Ga0068859_1003122742 279
154 3300006931 Ga0097620_100312296 Ga0097620_1003122962 279
155 3300013104 Ga0157370_10052747 Ga0157370_100527474 279
156 3300013307 Ga0157372_10008583 Ga0157372_100085834 279
157 3300013307 Ga0157372_10520487 Ga0157372_105204871 279
158 3300020069 Ga0197907_10533036 Ga0197907_105330362 279
159 3300020069 Ga0197907_10688011 Ga0197907_106880112 279
160 3300020070 Ga0206356_10853642 Ga0206356_108536424 279
161 3300020070 Ga0206356_11103418 Ga0206356_111034184 279
162 3300020070 Ga0206356_11470998 Ga0206356_114709981 279
163 3300020080 Ga0206350_10959874 Ga0206350_109598742 279
164 3300020081 Ga0206354_10223456 Ga0206354_102234566 279
165 3300020082 Ga0206353_10191156 Ga0206353_101911563 279
166 3300020082 Ga0206353_10655838 Ga0206353_106558389 279
167 3300022467 Ga0224712_10093022 Ga0224712_100930221 279
168 3300025904 Ga0207647_10001848 Ga0207647_1000184811 279
169 3300025904 Ga0207647_10004008 Ga0207647_1000400810 279
170 3300025909 Ga0207705_10000029 Ga0207705_10000029192 279
171 3300025909 Ga0207705_10013413 Ga0207705_100134131 279
172 3300025909 Ga0207705_10046467 Ga0207705_100464673 279
173 3300025912 Ga0207707_10000144 Ga0207707_1000014470 279
174 3300025912 Ga0207707_10001056 Ga0207707_1000105628 279
175 3300025912 Ga0207707_10002603 Ga0207707_100026034 279
176 3300025913 Ga0207695_10008505 Ga0207695_100085058 279
177 3300025913 Ga0207695_10028641 Ga0207695_100286411 279
178 3300025917 Ga0207660_10008289 Ga0207660_100082893 279
179 3300025917 Ga0207660_10011764 Ga0207660_100117645 279
180 3300025917 Ga0207660_10027447 Ga0207660_100274472 279
181 3300025917 Ga0207660_10160859 Ga0207660_101608592 279
182 3300025919 Ga0207657_10011700 Ga0207657_1001170010 279
183 3300025919 Ga0207657_10039680 Ga0207657_100396804 279
184 3300025920 Ga0207649_10001148 Ga0207649_100011488 279
185 3300025920 Ga0207649_10011637 Ga0207649_100116374 279
186 3300025921 Ga0207652_10000082 Ga0207652_1000008271 279
187 3300025921 Ga0207652_10000808 Ga0207652_100008086 279
188 3300025921 Ga0207652_10003445 Ga0207652_100034453 279
189 3300025921 Ga0207652_10006678 Ga0207652_100066787 279
190 3300025921 Ga0207652_10250003 Ga0207652_102500032 279
191 3300025932 Ga0207690_10000403 Ga0207690_1000040324 279
192 3300025932 Ga0207690_10106994 Ga0207690_101069943 279
193 3300025933 Ga0207706_10016786 Ga0207706_100167867 279
194 3300025944 Ga0207661_10007956 Ga0207661_100079562 279
195 3300025944 Ga0207661_10013219 Ga0207661_100132194 279
196 3300025945 Ga0207679_10029481 Ga0207679_100294815 279
197 3300025949 Ga0207667_10000075 Ga0207667_10000075127 279
198 3300025949 Ga0207667_10001949 Ga0207667_1000194910 279
199 3300025949 Ga0207667_10021238 Ga0207667_100212386 279
200 3300025981 Ga0207640_10000755 Ga0207640_100007555 279
201 3300025981 Ga0207640_10015866 Ga0207640_100158662 279
202 3300025981 Ga0207640_10040905 Ga0207640_100409053 279
203 3300025986 Ga0207658_10207521 Ga0207658_102075212 279
204 3300026041 Ga0207639_10002663 Ga0207639_100026637 279
205 3300026041 Ga0207639_10048281 Ga0207639_100482814 279
206 3300026067 Ga0207678_10005658 Ga0207678_100056584 279
207 3300026067 Ga0207678_10031573 Ga0207678_100315736 279
208 3300026067 Ga0207678_10038303 Ga0207678_100383034 279
209 3300026078 Ga0207702_10001306 Ga0207702_1000130612 279
210 3300026078 Ga0207702_10015126 Ga0207702_100151261 279
211 3300026116 Ga0207674_10003998 Ga0207674_100039981 279
212 3300026142 Ga0207698_10001298 Ga0207698_100012985 279
213 3300026142 Ga0207698_10011509 Ga0207698_100115097 279
214 3300037466 Ga0395898_0155253 Ga0395898_0155253_21_860 279
215 3300038443 Ga0395901_0104769 Ga0395901_0104769_1123_1962 279
216 3300044673 Ga0453683_0212594 Ga0453683_0212594_188_1075 279
217 3300049573 Ga0501037_0075546 Ga0501037_0075546_827_1666 279
218 3300049584 Ga0501068_0074186 Ga0501068_0074186_256_1095 279
219 3300049585 Ga0501069_0002572 Ga0501069_0002572_4014_4853 279
220 3300049585 Ga0501069_0032126 Ga0501069_0032126_1230_2069 279
221 3300049586 Ga0501070_0008196 Ga0501070_0008196_172_1011 279
222 3300049586 Ga0501070_0138601 Ga0501070_0138601_298_1251 279
223 3300049586 Ga0501070_0230201 Ga0501070_0230201_222_1061 279
224 3300049587 Ga0501071_0090683 Ga0501071_0090683_1137_1976 279
225 3300049589 Ga0501073_0080123 Ga0501073_0080123_310_1149 279
226 3300049593 Ga0501077_0219707 Ga0501077_0219707_46_885 279
227 3300049742 Ga0501080_0144437 Ga0501080_0144437_1236_2075 279
228 3300049822 Ga0501035_0020881 Ga0501035_0020881_3943_4782 279
229 3300049823 Ga0501044_0029354 Ga0501044_0029354_17_856 279
230 3300049823 Ga0501044_0512821 Ga0501044_0512821_20_859 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02678

Pirin

Pirin

81

182

0.96

PF05726

Pirin_C

Pirin C-terminal cupin domain

236

339

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hlt-assembly1.cif.gz_A crystal structure of ferric e32v pirin 0.9416 2 276
5jct-assembly1.cif.gz_A crystal structure of human pirin in complex with a chemical probe pyrrolidine 24 0.9413 3 276
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.9156 5 279
4hlt-assembly1.cif.gz_A crystal structure of ferric e32v pirin 0.912 2 276
6d0p-assembly4.cif.gz_D 1.88 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9108 2 279
ID Description Score Start End Superfamily
af_C0P2Q1_61_325_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9662 13 277 2.60.120.10
af_C0P2Q1_61_325_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9341 13 277 2.60.120.10
af_F1QLW3_37_119_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9333 37 123 2.60.120.10
af_Q557H8_87_213_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9332 18 140 2.60.120.10
af_Q54I01_21_279_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.933 10 245 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A2Z6E8T3-F1-model_v4 Pirin 0.9811 1 279 GO:0046872
AF-A0A2Z6E8T3-F1-model_v4 Pirin 0.9777 1 279 GO:0046872
AF-A0A2N1X3Q7-F1-model_v4 deleted 0.9775 123 279
AF-A0A2E3L3H3-F1-model_v4 Quercetin 2,3-dioxygenase 0.9759 1 279 GO:0046872
AF-A0A1F6V218-F1-model_v4 Quercetin 2,3-dioxygenase 0.973 1 278 GO:0046872

Feature Viewer

pLDDT pTM Quality
93.71 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map