F339761

General Info

Members Datasets Scaffolds Average Seq Length
227 159 174 886

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10002108|Ga0081539_100021086
Length 983
Sequence MSGATPKRRIGVNRNVFAIKPKQLDSRSWVRFLNRFTRGAKHWSAMTELAAPVALRFDHHPADRPVLGVGTGTPRLSWQVPAAPEGYAQSRYEVEISRGDAAPEVFPVSSGDQVLVPWPGAALAARETATVRVRVGDDATWSDWSDPATVEAGLLSPADWTARFVSPREVGAYGSPAPIVAGTVDLPDGVVRARLYATAHGLAVAHLNGHRIGDEQLAPGWTAYRHRLRYRTHDVTDLVQAGANRLEILLGNGWYRGRLGFQGRHALYGDRLAALAQLEVTTADGTVLVLATDGSWTARESGIVADDLYDGQRTDLRRAPGAAGPVDVLDADLSLLVAPDGPPVRITDVLPAVSVSTSPVGKTLIDFGQNVVGWVRLRVSGGAAGDEVTVRHAEVLEDGELGVRPLRTARATDSYVLAGPDEVTLEPSLTFHGFRYAEVTGVPGLRAEDLEAVVVGSDLRRTGWFSSSHQLLDRFHENVVWGMRGNFVDVPTDCPQRDERLGWTGDIQVFAPTASFLFDSAGFLTGWLADLAAEQQKDGSVPFVVPDVIRRPGPATAAWGDAATIVPWVIYQRTGDVALLTRQLPSMRAWVDKMADLAGDDLLWAGGFQFGDWLDPTAPPDRPAQAKADPDVIATAHFARSAEIVSQAAELVGDTDRAREYADLAARVRQAFAAEYTTTGGRVISDAATTYALALQWALLPAEDQRRRAGRRLADLVRGSAFRISTGFVGTPLMTDALTDAGEPGLAYRLLLQTGCPSWLYPVTMGATTVWERWDSMLPDGSINPGEMTSFNHYALGAVADWMHRRVAGLAPAAPGYRAIEVRPVPTAHLTSASARHLTPYGEAAVSWDRGDGWFGLRVTVPVGASATVHVPGRADPVVVGHGDHEWTAADPVRDEPLPADATIRQLMDHEPSWDTVVAAAREADVADDDTALAARLERFLDMPASQFVDAATAGGFIPGAEAMRARLEPILPAPLITPGGNA

Samples

Sample ID Description Type Environment
1 2517572101 Frankia sp. DC12 Isolate Nodule
2 2582580736 Prauserella sp. Am3 Isolate Unclassified
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221572 Leifsonia sp. Root60 Isolate Unclassified
5 2643221630 Microbacterium sp. Root322 Isolate Unclassified
6 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
7 2643221649 Leifsonia sp. Root4 Isolate Unclassified
8 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
9 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
10 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
11 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
12 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
13 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
14 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
15 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
16 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
17 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
18 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
19 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
20 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
21 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
22 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
23 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
24 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
25 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
26 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
27 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
28 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
29 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
30 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
31 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
32 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
33 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
34 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
35 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
36 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
37 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
38 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
39 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
40 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
42 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
43 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
44 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
68 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
69 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
152 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
153 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
157 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
158 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
159 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 78.41
Metatranscriptomes 0
Isolates 21.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.96
Nodule 0.88
Rhizoplane 1.32
Rhizosphere 58.15
Stem 0
Stem Tuber 0
Unclassified 35.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10006161 3300003203 Bacteria 5538
2 rootH1_10009377 3300003323 Bacteria 10825
3 Ga0055528_1007747 3300003790 Eukaryota 4701
4 Ga0070658_10000261 3300005327 Bacteria 46322
5 Ga0070668_100014999 3300005347 Bacteria 5789
6 Ga0070668_100016176 3300005347 Bacteria 5581
7 Ga0081540_1000579 3300005983 Bacteria 35373
8 Ga0081539_10000625 3300005985 Bacteria 71667
9 Ga0081539_10001336 3300005985 Bacteria 42955
10 Ga0081539_10002108 3300005985 Bacteria 29485
11 Ga0075365_10001092 3300006038 Bacteria 11790
12 Ga0075365_10004191 3300006038 Bacteria 7592
13 Ga0075428_100000337 3300006844 Bacteria 46678
14 Ga0075430_100006372 3300006846 Bacteria 9951
15 Ga0075431_100002053 3300006847 Bacteria 19241
16 Ga0075429_100000091 3300006880 Bacteria 48427
17 Ga0075429_100009245 3300006880 Bacteria 8555
18 Ga0105244_10000100 3300009036 Bacteria 89219
19 Ga0111539_10027127 3300009094 Bacteria 6995
20 Ga0105243_10031472 3300009148 Bacteria 4091
21 Ga0105239_10000611 3300010375 Eukaryota 50912
22 Ga0105246_10000201 3300011119 Bacteria 29996
23 Ga0157370_10016928 3300013104 Bacteria 7370
24 Ga0157369_10000512 3300013105 Bacteria 51112
25 Ga0157369_10001489 3300013105 Bacteria 28733
26 Ga0171462_1002 3300013250 Bacteria 1052134
27 Ga0182008_10009219 3300014497 Bacteria 5335
28 Ga0182007_10001244 3300015262 Bacteria 13834
29 Ga0209673_1000466 3300025273 Eukaryota 68258
30 Ga0207655_1000238 3300025728 Bacteria 90306
31 Ga0207655_1010667 3300025728 Bacteria 5555
32 Ga0207705_10000001 3300025909 Bacteria 2061880
33 Ga0207709_10006233 3300025935 Bacteria 6705
34 Ga0207667_10005914 3300025949 Bacteria 14898
35 Ga0265319_1002694 3300028563 Bacteria 9518
36 Ga0265334_10007892 3300028573 Bacteria 4552
37 Ga0307517_10022630 3300028786 Bacteria 7866
38 Ga0307515_10002464 3300028794 Bacteria 40245
39 Ga0307515_10004188 3300028794 Bacteria 30009
40 Ga0307515_10028149 3300028794 Bacteria 9564
41 Ga0265338_10003862 3300028800 Bacteria 20781
42 Ga0307512_10002042 3300030522 Bacteria 26638
43 Ga0265320_10015231 3300031240 Bacteria 4351
44 Ga0265325_10004256 3300031241 Bacteria 9080
45 Ga0307513_10003996 3300031456 Bacteria 19795
46 Ga0307513_10007184 3300031456 Bacteria 14462
47 Ga0307513_10010109 3300031456 Bacteria 11880
48 Ga0307508_10024994 3300031616 Bacteria 5418
49 Ga0265314_10015016 3300031711 Bacteria 6165
50 Ga0265342_10001990 3300031712 Bacteria 18227
51 Ga0307516_10003260 3300031730 Bacteria 21043
52 Ga0307405_10006002 3300031731 Bacteria 5934
53 Ga0307518_10001444 3300031838 Bacteria 17674
54 Ga0307406_10000432 3300031901 Bacteria 24441
55 Ga0307406_10008623 3300031901 Bacteria 5695
56 Ga0307412_10002790 3300031911 Bacteria 9704
57 Ga0307409_100008386 3300031995 Bacteria 6268
58 Ga0307409_100035983 3300031995 Bacteria 3634
59 Ga0307416_100006053 3300032002 Bacteria 7532
60 Ga0307416_100033221 3300032002 Bacteria 3909
61 Ga0395899_0001778 3300037312 Bacteria 17866
62 Ga0395900_0010141 3300037418 Bacteria 9635
63 Ga0395898_0003411 3300037466 Bacteria 17801
64 Ga0395898_0066313 3300037466 Bacteria 3498
65 Ga0395905_0012097 3300037471 Bacteria 8313
66 Ga0395901_0005309 3300038443 Bacteria 13021
67 Ga0453683_0010684 3300044673 Bacteria 6081
68 Ga0466965_0000036 3300044683 Bacteria 48837
69 Ga0466965_0018708 3300044683 Bacteria 3324
70 Ga0466961_0000809 3300044693 Bacteria 19484
71 Ga0466963_0000600 3300044694 Bacteria 17217
72 Ga0453684_0001339 3300044712 Bacteria 72274
73 Ga0453684_0001420 3300044712 Bacteria 68969
74 Ga0453684_0004091 3300044712 Bacteria 31642
75 Ga0466971_0000249 3300044719 Bacteria 20593
76 Ga0466970_0004683 3300044765 Bacteria 6755
77 Ga0466957_0004502 3300044842 Bacteria 7777
78 Ga0466959_0002235 3300045049 Bacteria 12334
79 Ga0451576_0000058 3300045051 Bacteria 298769
80 Ga0466958_0000478 3300045836 Bacteria 16754
81 Ga0466967_0029218 3300045976 Bacteria 4611
82 Ga0495585_0019139 3300046492 Bacteria 3951
83 Ga0495594_0002327 3300046499 Bacteria 9892
84 Ga0495608_0004941 3300046511 Eukaryota 9549
85 Ga0495618_0004860 3300046514 Eukaryota 8207
86 Ga0495628_0006210 3300046516 Eukaryota 10447
87 Ga0495652_0000067 3300046529 Eukaryota 108915
88 Ga0495652_0010301 3300046529 Eukaryota 8473
89 Ga0495634_0000802 3300046642 Eukaryota 30512
90 Ga0495635_0035124 3300046663 Bacteria 3476
91 Ga0495657_0000663 3300046675 Eukaryota 31172
92 Ga0495646_0003870 3300046680 Eukaryota 9358
93 Ga0495624_0001832 3300046690 Eukaryota 16237
94 Ga0495674_0000797 3300047319 Eukaryota 29931
95 Ga0495676_0000920 3300047321 Eukaryota 24641
96 Ga0495675_0009542 3300047444 Bacteria 6045
97 Ga0495602_0002065 3300048088 Eukaryota 20203
98 Ga0495602_0009447 3300048088 Eukaryota 10143
99 Ga0495602_0025399 3300048088 Eukaryota 5734
100 Ga0496108_0000280 3300048911 Bacteria 43780
101 Ga0496108_0005657 3300048911 Bacteria 10119
102 Ga0496111_0030120 3300048914 Bacteria 3859
103 Ga0496117_0000069 3300048920 Bacteria 246025
104 Ga0496117_0000091 3300048920 Bacteria 203826
105 Ga0496117_0000129 3300048920 Bacteria 164845
106 Ga0496117_0000178 3300048920 Bacteria 131062
107 Ga0496117_0001507 3300048920 Bacteria 33368
108 Ga0496117_0004292 3300048920 Bacteria 15875
109 Ga0496117_0030665 3300048920 Bacteria 4120
110 Ga0496118_0004642 3300048921 Bacteria 16117
111 Ga0496118_0007128 3300048921 Bacteria 11990
112 Ga0496118_0016773 3300048921 Bacteria 6696
113 Ga0496119_0003682 3300048922 Bacteria 15713
114 Ga0496119_0005010 3300048922 Bacteria 12916
115 Ga0496119_0006229 3300048922 Bacteria 11143
116 Ga0496119_0006888 3300048922 Bacteria 10373
117 Ga0496119_0007039 3300048922 Bacteria 10235
118 Ga0496120_0002427 3300048923 Bacteria 18859
119 Ga0496120_0003183 3300048923 Bacteria 15281
120 Ga0496120_0010417 3300048923 Bacteria 6489
121 Ga0496120_0017044 3300048923 Bacteria 4724
122 Ga0496122_0000116 3300048925 Bacteria 183371
123 Ga0496122_0002751 3300048925 Bacteria 24280
124 Ga0496122_0003992 3300048925 Bacteria 18813
125 Ga0496122_0025028 3300048925 Bacteria 5202
126 Ga0496123_0000009 3300048926 Bacteria 509486
127 Ga0496123_0002733 3300048926 Bacteria 21149
128 Ga0496123_0004554 3300048926 Bacteria 14460
129 Ga0496124_0000404 3300048927 Bacteria 78487
130 Ga0496124_0000834 3300048927 Bacteria 50281
131 Ga0496124_0002701 3300048927 Bacteria 22675
132 Ga0496124_0003149 3300048927 Bacteria 20401
133 Ga0496124_0010629 3300048927 Bacteria 9296
134 Ga0496125_0004383 3300048928 Bacteria 16338
135 Ga0496125_0004410 3300048928 Bacteria 16265
136 Ga0496125_0010070 3300048928 Bacteria 9592
137 Ga0496126_0000526 3300048929 Bacteria 74672
138 Ga0496126_0003726 3300048929 Bacteria 19004
139 Ga0496126_0006023 3300048929 Bacteria 13611
140 Ga0496126_0020778 3300048929 Bacteria 6427
141 Ga0496126_0060697 3300048929 Bacteria 3399
142 Ga0501031_0001611 3300049568 Bacteria 14109
143 Ga0501032_0002054 3300049569 Bacteria 15900
144 Ga0501033_0001340 3300049570 Bacteria 21890
145 Ga0501034_0001422 3300049571 Bacteria 31996
146 Ga0501034_0013892 3300049571 Bacteria 8290
147 Ga0501036_0019510 3300049572 Bacteria 5692
148 Ga0501037_0000803 3300049573 Bacteria 23492
149 Ga0501037_0006830 3300049573 Bacteria 8336
150 Ga0501038_0001605 3300049574 Bacteria 20984
151 Ga0501042_0056151 3300049578 Bacteria 2809
152 Ga0501043_0000731 3300049579 Bacteria 29117
153 Ga0501046_0000718 3300049580 Bacteria 32049
154 Ga0501047_0002085 3300049581 Bacteria 19146
155 Ga0501047_0004371 3300049581 Bacteria 13299
156 Ga0501048_0000701 3300049582 Bacteria 24412
157 Ga0501070_0001490 3300049586 Bacteria 20953
158 Ga0501035_0000831 3300049822 Bacteria 32972
159 Ga0501044_0001491 3300049823 Bacteria 27405
160 nmdc:mga0yw44_55631_c1 3300050492 Bacteria 2408
161 nmdc:mga05p37_217_c1 3300050507 Bacteria 57809
162 nmdc:mga05p37_310_c1 3300050507 Bacteria 51515
163 nmdc:mga09592_7252_c1 3300050508 Bacteria 9010
164 nmdc:mga09592_8052_c1 3300050508 Bacteria 8574
165 nmdc:mga0qj67_1503_c1 3300050509 Bacteria 16358
166 nmdc:mga0qj67_55324_c1 3300050509 Bacteria 3143
167 nmdc:mga06r32_1556_c1 3300050510 Bacteria 20691
168 nmdc:mga08y16_44123_c1 3300050511 Bacteria 4671
169 nmdc:mga0a205_55870_c1 3300050515 Bacteria 3812
170 Ga0500556_0000108 3300053104 Bacteria 74136
171 Ga0500659_0001028 3300053135 Eukaryota 17944
172 Ga0500600_0007574 3300053149 Eukaryota 6534
173 Ga0500616_0000010 3300053153 Bacteria 761410
174 Ga0466962_0000581 3300061719 Bacteria 16076

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046516 Ga0495628_0006210 Ga0495628_0006210_471_2702 712
2 3300046529 Ga0495652_0010301 Ga0495652_0010301_2061_4292 712
3 3300046642 Ga0495634_0000802 Ga0495634_0000802_20791_23022 712
4 3300046690 Ga0495624_0001832 Ga0495624_0001832_13077_15308 712
5 3300047319 Ga0495674_0000797 Ga0495674_0000797_20681_22912 712
6 3300047321 Ga0495676_0000920 Ga0495676_0000920_19593_21824 712
7 3300048088 Ga0495602_0025399 Ga0495602_0025399_2439_4670 712
8 3300049571 Ga0501034_0013892 Ga0501034_0013892_5314_7641 717
9 3300050492 nmdc:mga0yw44_55631_c1 nmdc:mga0yw44_55631_c1_14_2383 778
10 3300009036 Ga0105244_10000100 Ga0105244_1000010048 787
11 3300011119 Ga0105246_10000201 Ga0105246_100002013 787
12 3300005983 Ga0081540_1000579 Ga0081540_100057928 808
13 3300028563 Ga0265319_1002694 Ga0265319_10026943 811
14 3300028573 Ga0265334_10007892 Ga0265334_100078922 811
15 3300028800 Ga0265338_10003862 Ga0265338_100038629 811
16 3300031240 Ga0265320_10015231 Ga0265320_100152312 811
17 3300031241 Ga0265325_10004256 Ga0265325_100042564 811
18 3300031711 Ga0265314_10015016 Ga0265314_100150164 811
19 3300031712 Ga0265342_10001990 Ga0265342_1000199011 811
20 3300048925 Ga0496122_0000116 Ga0496122_0000116_26588_29170 811
21 3300048926 Ga0496123_0000009 Ga0496123_0000009_75867_78449 811
22 3300048927 Ga0496124_0000404 Ga0496124_0000404_72114_74696 811
23 3300048928 Ga0496125_0004383 Ga0496125_0004383_727_3309 811
24 3300044683 Ga0466965_0000036 Ga0466965_0000036_10452_13082 816
25 3300048920 Ga0496117_0001507 Ga0496117_0001507_14388_16970 816
26 3300048921 Ga0496118_0007128 Ga0496118_0007128_7716_10298 816
27 3300048922 Ga0496119_0005010 Ga0496119_0005010_470_3052 816
28 3300048923 Ga0496120_0017044 Ga0496120_0017044_47_2629 816
29 3300049573 Ga0501037_0006830 Ga0501037_0006830_969_3653 817
30 iso_pu_bacteria 8046352972 8046355039 817
31 3300048920 Ga0496117_0030665 Ga0496117_0030665_138_2690 819
32 iso_pu_bacteria 2857733635 2857734232 819
33 3300047444 Ga0495675_0009542 Ga0495675_0009542_1682_4297 826
34 3300048920 Ga0496117_0000129 Ga0496117_0000129_105257_107899 829
35 iso_pu_bacteria 2837268691 2837270681 829
36 iso_pu_bacteria 2643221632 2644181583 832
37 iso_pu_bacteria 2866552031 2866554403 834
38 3300048920 Ga0496117_0000091 Ga0496117_0000091_43441_46071 836
39 3300048922 Ga0496119_0007039 Ga0496119_0007039_247_2877 836
40 3300048923 Ga0496120_0010417 Ga0496120_0010417_3621_6251 836
41 3300048925 Ga0496122_0003992 Ga0496122_0003992_5349_7979 836
42 3300048926 Ga0496123_0004554 Ga0496123_0004554_6493_9123 836
43 3300048927 Ga0496124_0003149 Ga0496124_0003149_5346_7976 836
44 3300048928 Ga0496125_0004410 Ga0496125_0004410_10415_13045 836
45 3300048929 Ga0496126_0006023 Ga0496126_0006023_5338_7968 836
46 3300031901 Ga0307406_10000432 Ga0307406_1000043216 837
47 3300046663 Ga0495635_0035124 Ga0495635_0035124_664_3237 838
48 iso_pu_bacteria 2945968032 2945968860 838
49 3300048929 Ga0496126_0060697 Ga0496126_0060697_680_3223 839
50 3300049586 Ga0501070_0001490 Ga0501070_0001490_12006_14597 839
51 3300005327 Ga0070658_10000261 Ga0070658_1000026123 841
52 3300025909 Ga0207705_10000001 Ga0207705_10000001860 841
53 3300031456 Ga0307513_10007184 Ga0307513_100071842 843
54 iso_pu_bacteria 2852646457 2852648310 844
55 iso_pu_bacteria 2945968032 2945970408 844
56 3300013104 Ga0157370_10016928 Ga0157370_100169281 845
57 3300049568 Ga0501031_0001611 Ga0501031_0001611_7994_10561 845
58 3300049569 Ga0501032_0002054 Ga0501032_0002054_12579_15146 845
59 3300049570 Ga0501033_0001340 Ga0501033_0001340_6793_9360 845
60 3300049571 Ga0501034_0001422 Ga0501034_0001422_17340_19907 845
61 3300049572 Ga0501036_0019510 Ga0501036_0019510_25_2592 845
62 3300049573 Ga0501037_0000803 Ga0501037_0000803_4855_7422 845
63 3300049574 Ga0501038_0001605 Ga0501038_0001605_13747_16314 845
64 3300049578 Ga0501042_0056151 Ga0501042_0056151_207_2774 845
65 3300049579 Ga0501043_0000731 Ga0501043_0000731_14341_16908 845
66 3300049580 Ga0501046_0000718 Ga0501046_0000718_17398_19965 845
67 3300049581 Ga0501047_0002085 Ga0501047_0002085_12618_15185 845
68 3300049582 Ga0501048_0000701 Ga0501048_0000701_17441_20008 845
69 3300049822 Ga0501035_0000831 Ga0501035_0000831_14235_16802 845
70 3300049823 Ga0501044_0001491 Ga0501044_0001491_12983_15550 845
71 3300053153 Ga0500616_0000010 Ga0500616_0000010_138112_140811 845
72 iso_pu_bacteria 2643221542 2643734588 846
73 iso_pu_bacteria 2643221630 2644172714 846
74 iso_pu_bacteria 2883821847 2883824989 846
75 3300006844 Ga0075428_100000337 Ga0075428_10000033734 848
76 3300006846 Ga0075430_100006372 Ga0075430_1000063727 848
77 3300006847 Ga0075431_100002053 Ga0075431_10000205317 848
78 3300006880 Ga0075429_100000091 Ga0075429_10000009111 848
79 3300048927 Ga0496124_0010629 Ga0496124_0010629_1726_4365 848
80 3300050507 nmdc:mga05p37_310_c1 nmdc:mga05p37_310_c1_12437_15043 848
81 3300050508 nmdc:mga09592_7252_c1 nmdc:mga09592_7252_c1_4321_6927 848
82 3300050509 nmdc:mga0qj67_1503_c1 nmdc:mga0qj67_1503_c1_10574_13180 848
83 3300050510 nmdc:mga06r32_1556_c1 nmdc:mga06r32_1556_c1_16002_18608 848
84 3300046529 Ga0495652_0000067 Ga0495652_0000067_18072_20885 849
85 3300048088 Ga0495602_0002065 Ga0495602_0002065_9803_12616 849
86 3300048925 Ga0496122_0025028 Ga0496122_0025028_1597_4206 849
87 iso_pu_bacteria 2877676314 2877684103 849
88 3300049581 Ga0501047_0004371 Ga0501047_0004371_5477_8074 850
89 iso_pu_bacteria 2643221572 2643876060 850
90 iso_pu_bacteria 2643221669 2644383115 850
91 iso_pu_bacteria 2867346516 2867350647 850
92 iso_pu_bacteria 2895660088 2895660259 850
93 iso_pu_bacteria 2905926851 2905930593 850
94 3300003323 rootH1_10009377 rootH1_100093773 851
95 3300014497 Ga0182008_10009219 Ga0182008_100092192 851
96 3300015262 Ga0182007_10001244 Ga0182007_100012442 851
97 3300048929 Ga0496126_0020778 Ga0496126_0020778_1053_3644 851
98 iso_pu_bacteria 2808606700 2810365211 851
99 iso_pu_bacteria 2811994872 2812324557 851
100 3300053149 Ga0500600_0007574 Ga0500600_0007574_621_3236 852
101 iso_pu_bacteria 2582580736 2583150199 852
102 iso_pu_bacteria 2643221678 2644441777 852
103 iso_pu_bacteria 2784746768 2785366430 852
104 iso_pu_bacteria 2905926851 2905928716 852
105 iso_pu_bacteria 2821268502 2821268786 853
106 3300046499 Ga0495594_0002327 Ga0495594_0002327_366_2984 854
107 3300048920 Ga0496117_0000178 Ga0496117_0000178_47445_50030 854
108 iso_pu_bacteria 2964326757 2964326763 854
109 3300003790 Ga0055528_1007747 Ga0055528_10077472 855
110 3300006038 Ga0075365_10001092 Ga0075365_100010928 855
111 3300006038 Ga0075365_10004191 Ga0075365_100041913 855
112 3300025273 Ga0209673_1000466 Ga0209673_100046617 855
113 3300044683 Ga0466965_0018708 Ga0466965_0018708_50_2653 855
114 3300048088 Ga0495602_0009447 Ga0495602_0009447_7318_10068 855
115 3300050509 nmdc:mga0qj67_55324_c1 nmdc:mga0qj67_55324_c1_187_2952 855
116 3300053104 Ga0500556_0000108 Ga0500556_0000108_863_3463 855
117 3300031911 Ga0307412_10002790 Ga0307412_100027904 856
118 3300031995 Ga0307409_100008386 Ga0307409_1000083863 856
119 3300032002 Ga0307416_100006053 Ga0307416_1000060532 856
120 3300025949 Ga0207667_10005914 Ga0207667_100059146 858
121 3300053135 Ga0500659_0001028 Ga0500659_0001028_908_3658 859
122 iso_pu_bacteria 2857720070 2857721800 859
123 3300005347 Ga0070668_100016176 Ga0070668_1000161761 862
124 3300046511 Ga0495608_0004941 Ga0495608_0004941_4653_7403 863
125 3300046514 Ga0495618_0004860 Ga0495618_0004860_5078_7828 863
126 3300046675 Ga0495657_0000663 Ga0495657_0000663_7959_10709 863
127 3300046680 Ga0495646_0003870 Ga0495646_0003870_6191_8941 863
128 iso_pu_bacteria 2928121344 2928124488 863
129 3300010375 Ga0105239_10000611 Ga0105239_1000061113 866
130 3300013105 Ga0157369_10000512 Ga0157369_1000051241 867
131 3300028794 Ga0307515_10002464 Ga0307515_1000246413 867
132 3300028794 Ga0307515_10004188 Ga0307515_1000418828 867
133 3300030522 Ga0307512_10002042 Ga0307512_1000204210 867
134 3300031616 Ga0307508_10024994 Ga0307508_100249942 867
135 3300028786 Ga0307517_10022630 Ga0307517_100226305 868
136 3300031456 Ga0307513_10010109 Ga0307513_100101097 868
137 iso_pu_bacteria 2857729791 2857731602 868
138 3300031456 Ga0307513_10003996 Ga0307513_100039968 869
139 iso_pu_bacteria 2517572101 2517763066 870
140 iso_pu_bacteria 2919443155 2919443845 870
141 3300013105 Ga0157369_10001489 Ga0157369_100014894 875
142 3300037418 Ga0395900_0010141 Ga0395900_0010141_2543_5377 875
143 3300037466 Ga0395898_0066313 Ga0395898_0066313_437_3271 875
144 3300046492 Ga0495585_0019139 Ga0495585_0019139_1133_3922 883
145 3300048920 Ga0496117_0000069 Ga0496117_0000069_111303_114113 884
146 3300048922 Ga0496119_0006888 Ga0496119_0006888_5704_8514 884
147 3300048923 Ga0496120_0003183 Ga0496120_0003183_2587_5397 884
148 3300048925 Ga0496122_0002751 Ga0496122_0002751_1854_4664 884
149 3300048926 Ga0496123_0002733 Ga0496123_0002733_15140_17950 884
150 3300048927 Ga0496124_0000834 Ga0496124_0000834_47084_49894 884
151 3300048928 Ga0496125_0010070 Ga0496125_0010070_6057_8867 884
152 3300048929 Ga0496126_0003726 Ga0496126_0003726_11147_13957 884
153 3300009094 Ga0111539_10027127 Ga0111539_100271272 886
154 3300050515 nmdc:mga0a205_55870_c1 nmdc:mga0a205_55870_c1_237_3011 886
155 3300028794 Ga0307515_10028149 Ga0307515_100281492 887
156 3300048929 Ga0496126_0000526 Ga0496126_0000526_38605_41391 887
157 3300031731 Ga0307405_10006002 Ga0307405_100060023 888
158 3300048911 Ga0496108_0005657 Ga0496108_0005657_6159_8972 888
159 3300048914 Ga0496111_0030120 Ga0496111_0030120_596_3409 888
160 3300037312 Ga0395899_0001778 Ga0395899_0001778_1844_4678 889
161 iso_pu_bacteria 2990088156 2990089365 889
162 3300050511 nmdc:mga08y16_44123_c1 nmdc:mga08y16_44123_c1_615_3407 890
163 3300025728 Ga0207655_1000238 Ga0207655_100023848 891
164 3300048921 Ga0496118_0004642 Ga0496118_0004642_1174_3954 892
165 3300048922 Ga0496119_0006229 Ga0496119_0006229_3057_5837 892
166 3300048925 Ga0496122_0000116 Ga0496122_0000116_156726_159506 892
167 3300048926 Ga0496123_0000009 Ga0496123_0000009_206005_208785 892
168 3300048927 Ga0496124_0002701 Ga0496124_0002701_15303_18083 892
169 3300048911 Ga0496108_0000280 Ga0496108_0000280_16547_19417 893
170 3300048920 Ga0496117_0004292 Ga0496117_0004292_1949_4771 893
171 3300048921 Ga0496118_0016773 Ga0496118_0016773_2550_5372 893
172 3300005985 Ga0081539_10000625 Ga0081539_1000062523 894
173 3300031730 Ga0307516_10003260 Ga0307516_100032609 894
174 iso_pu_bacteria 2821268502 2821271272 894
175 iso_pu_bacteria 2867346516 2867347894 894
176 3300009148 Ga0105243_10031472 Ga0105243_100314722 895
177 3300025728 Ga0207655_1010667 Ga0207655_10106672 895
178 3300025935 Ga0207709_10006233 Ga0207709_100062332 895
179 iso_pu_bacteria 2895427314 2895428924 895
180 3300048922 Ga0496119_0003682 Ga0496119_0003682_10229_13045 896
181 3300048923 Ga0496120_0002427 Ga0496120_0002427_34_2850 896
182 iso_pu_bacteria 2811994872 2812324808 896
183 3300031838 Ga0307518_10001444 Ga0307518_100014443 897
184 iso_pu_bacteria 2887443736 2887445253 897
185 iso_pu_bacteria 2964326757 2964326768 897
186 iso_pu_bacteria 2757320536 2758227362 898
187 iso_pu_bacteria 8047710418 8047710472 898
188 3300005347 Ga0070668_100014999 Ga0070668_1000149992 899
189 iso_pu_bacteria 2751185782 2753270920 899
190 iso_pu_bacteria 2758568522 2760303741 900
191 iso_pu_bacteria 2643221649 2644277963 901
192 iso_pu_bacteria 2816332119 2816426024 901
193 iso_pu_bacteria 2833709550 2833712565 901
194 3300031901 Ga0307406_10008623 Ga0307406_100086233 902
195 iso_pu_bacteria 2946037020 2946039271 902
196 3300013250 Ga0171462_1002 Ga0171462_1002547 903
197 iso_pu_bacteria 2919059106 2919059962 903
198 iso_pu_bacteria 8045830549 8045833629 903
199 3300048929 Ga0496126_0000526 Ga0496126_0000526_41445_44243 905
200 3300005985 Ga0081539_10002108 Ga0081539_100021086 906
201 3300037466 Ga0395898_0003411 Ga0395898_0003411_1118_3958 908
202 3300037471 Ga0395905_0012097 Ga0395905_0012097_4625_7465 908
203 3300038443 Ga0395901_0005309 Ga0395901_0005309_335_3175 908
204 3300044693 Ga0466961_0000809 Ga0466961_0000809_3654_6515 909
205 3300044694 Ga0466963_0000600 Ga0466963_0000600_3850_6711 909
206 3300044719 Ga0466971_0000249 Ga0466971_0000249_7454_10315 909
207 3300044765 Ga0466970_0004683 Ga0466970_0004683_313_3174 909
208 3300044842 Ga0466957_0004502 Ga0466957_0004502_3616_6477 909
209 3300045049 Ga0466959_0002235 Ga0466959_0002235_9392_12253 909
210 3300045836 Ga0466958_0000478 Ga0466958_0000478_166_3027 909
211 3300045976 Ga0466967_0029218 Ga0466967_0029218_311_3172 909
212 3300061719 Ga0466962_0000581 Ga0466962_0000581_11688_14549 909
213 iso_pu_bacteria 2758568621 2760623245 909
214 3300044712 Ga0453684_0001339 Ga0453684_0001339_11627_14431 912
215 iso_pu_bacteria 8008558824 8008565425 914
216 3300044673 Ga0453683_0010684 Ga0453683_0010684_3149_5953 929
217 3300045051 Ga0451576_0000058 Ga0451576_0000058_17936_20740 929
218 3300044712 Ga0453684_0001339 Ga0453684_0001339_2097_4904 933
219 3300044712 Ga0453684_0001420 Ga0453684_0001420_59446_62268 936
220 3300044712 Ga0453684_0004091 Ga0453684_0004091_23869_26712 936
221 3300031995 Ga0307409_100035983 Ga0307409_1000359832 938
222 3300032002 Ga0307416_100033221 Ga0307416_1000332212 938
223 3300003203 JGI25406J46586_10006161 JGI25406J46586_100061613 939
224 3300005985 Ga0081539_10001336 Ga0081539_1000133639 939
225 3300006880 Ga0075429_100009245 Ga0075429_1000092457 939
226 3300050507 nmdc:mga05p37_217_c1 nmdc:mga05p37_217_c1_50390_53245 939
227 3300050508 nmdc:mga09592_8052_c1 nmdc:mga09592_8052_c1_4079_6934 939

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17389

Bac_rhamnosid6H

Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain

460

807

0.98

PF17390

Bac_rhamnosid_C

Bacterial alpha-L-rhamnosidase C-terminal domain

809

886

0.95

PF08531

Bac_rhamnosid_N

Alpha-L-rhamnosidase N-terminal domain

188

348

0.94

PF05592

Bac_rhamnosid

Bacterial alpha-L-rhamnosidase concanavalin-like domain

356

456

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gsz-assembly1.cif.gz_A crystal structure of native alfa-l-rhamnosidase from aspergillus terreus 0.9742 3 859
6gsz-assembly1.cif.gz_A crystal structure of native alfa-l-rhamnosidase from aspergillus terreus 0.9664 3 859
3w5n-assembly1.cif.gz_A crystal structure of streptomyces avermitilis alpha-l-rhamnosidase complexed with l-rhamnose 0.9398 4 859
6i60-assembly1.cif.gz_A structure of alpha-l-rhamnosidase from dictyoglumus thermophilum 0.9116 2 861
6i60-assembly2.cif.gz_B structure of alpha-l-rhamnosidase from dictyoglumus thermophilum 0.9056 3 861
ID Description Score Start End Superfamily
3w5mA04 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9638 310 425 2.60.120.260
3w5mA05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9518 428 774 1.50.10.10
3w5mA06 Mainly Beta;Sandwich;Maltose phosphorylase, domain 3;Maltose phosphorylase, domain 3 0.937 781 861 2.60.420.10
3w5mA05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9299 428 774 1.50.10.10
3w5mA02 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9286 112 307 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A6J4JUV8-F1-model_v4 alpha-L-rhamnosidase (EC 3.2.1.40) 0.9912 55 583 GO:0005975
GO:0030596
AF-A0A6J4JUV8-F1-model_v4 alpha-L-rhamnosidase (EC 3.2.1.40) 0.9819 55 583 GO:0005975
GO:0030596
AF-A0A060C9H7-F1-model_v4 Bac_rhamnosid_N 0.9808 148 308
AF-A0A7G5ZTE6-F1-model_v4 alpha-L-rhamnosidase (EC 3.2.1.40) 0.979 22 861 GO:0005975
GO:0030596
AF-A0A3E0VPS8-F1-model_v4 alpha-L-rhamnosidase (EC 3.2.1.40) 0.9783 81 862 GO:0005975
GO:0030596

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Predicted Structure (AlphaFold2)

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