F339387

General Info

Members Datasets Scaffolds Average Seq Length
226 159 212 650

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221603|2644030414
Length 748
Sequence LWFAVACGVLAVIYGLMSRSWILSQDAGNARMQEIALAIQQGAAAYLGRQYRTIAIVGVVLFILIAILPGLGLKTAAGFLIGAVLSGACGFIGMNVSVRANVRTAQAATKGMNEALDVAFRGGAITGMLVAGLGLLGVVLFYWYLTSSGANASSIHDVLKPLIGLGFGASLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVTLIATMLLGALVIKGAEMQAVLYPLLLAAVSIPASIIGCWMVKAKPGKKIMSALYTGLWWAAGLSLIGFAVVTWMVLPEPMRVPMMGSAVVGIVLTGLMVYITEYYTGTDFKPVRHIAEASTTGHGTNIIAGLGVSMKSTAYPVLSVCVAILVAYWLGGLYGVAIAATAMLSMAGIIVALDAYGPITDNAGGIAEMSELPDSVRAITDPLDAVGNTTKAVTKGYAIGSAGLAALVLFADYTHALDSVGKSTSFDLSNPMVIVGLFIGGLIPYLFGAMAMEAVGRAAGAVVIEVRRQFRDIKGIMDGSGKPEYDKAVDMLTASAIKEMVIPSLLPVVVPVLVGMLLGPAALGGLLMGTIVTGLFVAISMTTGGGAWDNAKKYIEDGHHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLLVPLLPATAPQAGGAHGPASITAPAGTPPTTDSAAPIASFSGGAELPAGVALVVNSSLLTPPAPCQSKKIHRSHLSRYSLGLV

Samples

Sample ID Description Type Environment
1 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
2 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2643221556 Massilia sp. Root1485 Isolate Unclassified
4 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
5 2643221684 Massilia sp. Root133 Isolate Unclassified
6 2643221695 Lysobacter sp. Root494 Isolate Unclassified
7 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
8 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
9 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
10 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
11 2919476304 Duganella sp. 3397 Isolate Unclassified
12 2919513703 Luteimonas sp. 3794 Isolate Unclassified
13 2919675420 Luteimonas terrae 4099 Isolate Unclassified
14 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
15 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
16 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
17 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
18 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
19 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
20 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
21 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
22 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
23 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
24 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
28 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
51 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
71 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
78 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
79 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
89 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
90 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
103 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
109 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
110 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
120 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
121 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
125 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
158 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
159 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.04
Metatranscriptomes 1.77
Isolates 6.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.58
Nodule 0
Rhizoplane 1.77
Rhizosphere 67.7
Stem 0
Stem Tuber 0
Unclassified 11.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000001 3300002737 Bacteria 740113
2 JGI25152J39213_1000060 3300002773 Bacteria 73031
3 JGI25159J45721_1001855 3300002987 Bacteria 8445
4 JGI25165J46597_1000001 3300003214 Bacteria 1111887
5 JGI25153J46596_10004854 3300003215 Bacteria 7162
6 Ga0055538_1000001 3300003751 Bacteria 1111887
7 Ga0055539_1000001 3300003752 Bacteria 1111887
8 Ga0055533_1000003 3300003756 Bacteria 1111887
9 Ga0055525_1000003 3300003759 Bacteria 962094
10 Ga0055525_1000026 3300003759 Bacteria 345798
11 Ga0055535_1000702 3300003761 Bacteria 25845
12 Ga0055529_1000340 3300003763 Bacteria 52215
13 Ga0055526_1013226 3300003771 Bacteria 3510
14 Ga0055524_1005246 3300003775 Bacteria 5824
15 Ga0055524_1005459 3300003775 Bacteria 5673
16 Ga0055541_1000001 3300003841 Bacteria 1111887
17 Ga0070682_100009474 3300005337 Bacteria 5511
18 Ga0070662_100003230 3300005457 Bacteria 10132
19 Ga0081538_10002827 3300005981 Bacteria 16610
20 Ga0075362_10005483 3300006177 Bacteria 4647
21 Ga0105250_10000010 3300009092 Bacteria 298384
22 Ga0114129_10138612 3300009147 Bacteria 3337
23 Ga0157371_10000184 3300013102 Bacteria 92100
24 Ga0157375_10117224 3300013308 Bacteria 2768
25 Ga0182008_10001405 3300014497 Bacteria 16197
26 Ga0157379_10001470 3300014968 Bacteria 19421
27 Ga0182006_1000004 3300015261 Bacteria 622190
28 Ga0182006_1011315 3300015261 Bacteria 3929
29 Ga0182007_10000017 3300015262 Bacteria 199097
30 Ga0182007_10000118 3300015262 Bacteria 54536
31 Ga0182007_10003779 3300015262 Bacteria 7052
32 Ga0182005_1000030 3300015265 Bacteria 213092
33 Ga0182005_1000158 3300015265 Bacteria 47201
34 Ga0182005_1001582 3300015265 Bacteria 8964
35 Ga0213872_10000008 3300021361 Bacteria 226283
36 Ga0213872_10000248 3300021361 Bacteria 47632
37 Ga0213872_10001017 3300021361 Bacteria 19543
38 Ga0213875_10002653 3300021388 Bacteria 10582
39 Ga0209436_100863 3300025208 Bacteria 12131
40 Ga0209784_100004 3300025224 Bacteria 1378156
41 Ga0209566_100004 3300025225 Bacteria 1531866
42 Ga0209674_100006 3300025226 Bacteria 1531866
43 Ga0209563_100005 3300025230 Bacteria 1774893
44 Ga0209563_100009 3300025230 Bacteria 1378156
45 Ga0209437_100004 3300025233 Bacteria 1378156
46 Ga0209258_100060 3300025242 Bacteria 319881
47 Ga0207425_1000017 3300025245 Bacteria 423851
48 Ga0207425_1000331 3300025245 Bacteria 33106
49 Ga0209677_100005 3300025253 Bacteria 1378156
50 Ga0209148_1000203 3300025254 Bacteria 105950
51 Ga0209759_1000663 3300025256 Bacteria 31934
52 Ga0209129_1000039 3300025258 Bacteria 322444
53 Ga0209233_1000005 3300025261 Bacteria 1531866
54 Ga0209455_1000093 3300025272 Bacteria 220487
55 Ga0209130_1005857 3300025284 Bacteria 4141
56 Ga0209130_1005862 3300025284 Bacteria 4141
57 Ga0209758_1000192 3300025297 Bacteria 136933
58 Ga0209050_1000168 3300025298 Bacteria 151278
59 Ga0209256_1000207 3300025299 Bacteria 111217
60 Ga0209256_1001310 3300025299 Bacteria 26703
61 Ga0209257_1000806 3300025304 Bacteria 45591
62 Ga0207696_1000133 3300025711 Bacteria 131987
63 Ga0207706_10008572 3300025933 Bacteria 9423
64 Ga0207678_10000473 3300026067 Bacteria 36408
65 Ga0265760_10000954 3300031090 Bacteria 8365
66 Ga0265328_10011172 3300031239 Bacteria 3595
67 Ga0265328_10025920 3300031239 Bacteria 2206
68 Ga0265331_10000161 3300031250 Bacteria 84155
69 Ga0265327_10000043 3300031251 Bacteria 285108
70 Ga0307513_10018754 3300031456 Bacteria 8259
71 Ga0316579_10013424 3300031691 Bacteria 3523
72 Ga0316579_10034496 3300031691 Bacteria 2328
73 Ga0316576_10003376 3300031727 Bacteria 9336
74 Ga0316576_10048475 3300031727 Bacteria 3081
75 Ga0307516_10000202 3300031730 Bacteria 77604
76 Ga0316577_10039025 3300031733 Bacteria 2657
77 Ga0307413_10005158 3300031824 Bacteria 5789
78 Ga0307410_10017031 3300031852 Bacteria 4351
79 Ga0307407_10001896 3300031903 Bacteria 7895
80 Ga0316583_10003159 3300032133 Bacteria 5790
81 Ga0316583_10012471 3300032133 Bacteria 3068
82 Ga0316580_10006332 3300032139 Bacteria 3494
83 Ga0316580_10011739 3300032139 Bacteria 2662
84 Ga0316592_1000379 3300033524 Bacteria 5907
85 Ga0316592_1001131 3300033524 Bacteria 4184
86 Ga0316596_1004146 3300033541 Bacteria 3225
87 Ga0316574_0039453 3300035398 Bacteria 2903
88 Ga0316582_0009748 3300036647 Bacteria 5224
89 Ga0395899_0002457 3300037312 Bacteria 15045
90 Ga0395898_0004228 3300037466 Bacteria 15742
91 Ga0395905_0020727 3300037471 Bacteria 6223
92 Ga0436364_0353649 3300037853 Bacteria 72201
93 Ga0395901_0093747 3300038443 Bacteria 3144
94 Ga0395901_0110526 3300038443 Bacteria 2885
95 Ga0400483_156636 3300039062 Bacteria 26290
96 Ga0400487_41006 3300039110 Bacteria 27982
97 Ga0436360_0563299 3300039438 Bacteria 13164
98 Ga0436361_0041904 3300039447 Bacteria 73505
99 Ga0436361_0048162 3300039447 Bacteria 44153
100 Ga0436361_0182416 3300039447 Bacteria 55509
101 Ga0436361_0318385 3300039447 Bacteria 34319
102 Ga0436361_0784532 3300039447 Bacteria 10452
103 Ga0436361_1063608 3300039447 Bacteria 4164
104 Ga0466969_0000002 3300044656 Bacteria 178693
105 Ga0466969_0018429 3300044656 Bacteria 3636
106 Ga0466972_0000088 3300044658 Bacteria 84167
107 Ga0466972_0003572 3300044658 Bacteria 7730
108 Ga0466966_0043688 3300044684 Bacteria 2871
109 Ga0466961_0005212 3300044693 Bacteria 8181
110 Ga0466963_0016379 3300044694 Bacteria 4609
111 Ga0466964_0003737 3300044706 Bacteria 5575
112 Ga0453684_0050082 3300044712 Bacteria 5499
113 Ga0466957_0019707 3300044842 Bacteria 3968
114 Ga0466959_0000793 3300045049 Bacteria 18583
115 Ga0466959_0016106 3300045049 Bacteria 5456
116 Ga0466958_0000434 3300045836 Bacteria 17307
117 Ga0495617_000026 3300046452 Bacteria 157675
118 Ga0495627_000038 3300046453 Bacteria 198316
119 Ga0495627_000043 3300046453 Bacteria 185855
120 Ga0495590_0007131 3300046457 Bacteria 4325
121 Ga0495651_0004636 3300046462 Bacteria 10512
122 Ga0495653_0019617 3300046463 Bacteria 5483
123 Ga0495650_0000048 3300046471 Bacteria 334427
124 Ga0495605_0000113 3300046474 Bacteria 103900
125 Ga0495605_0000186 3300046474 Bacteria 77457
126 Ga0495584_0000252 3300046491 Bacteria 38603
127 Ga0495584_0004192 3300046491 Bacteria 7779
128 Ga0495585_0000672 3300046492 Bacteria 31390
129 Ga0495585_0012294 3300046492 Bacteria 5042
130 Ga0495585_0014329 3300046492 Bacteria 4621
131 Ga0495585_0025018 3300046492 Bacteria 3421
132 Ga0495607_0000727 3300046501 Bacteria 31636
133 Ga0495607_0001791 3300046501 Bacteria 18333
134 Ga0495607_0006162 3300046501 Bacteria 8478
135 Ga0495583_0000203 3300046506 Bacteria 99978
136 Ga0495583_0001150 3300046506 Bacteria 28793
137 Ga0495583_0018153 3300046506 Bacteria 3711
138 Ga0495606_0002601 3300046507 Bacteria 20643
139 Ga0495608_0039188 3300046511 Bacteria 3178
140 Ga0495616_0000048 3300046513 Bacteria 108577
141 Ga0495616_0011660 3300046513 Bacteria 5026
142 Ga0495628_0000707 3300046516 Bacteria 30850
143 Ga0495631_0002923 3300046518 Bacteria 9464
144 Ga0495632_0000152 3300046519 Bacteria 71699
145 Ga0495643_0000206 3300046522 Bacteria 91463
146 Ga0495643_0006368 3300046522 Bacteria 7794
147 Ga0495643_0008875 3300046522 Bacteria 6322
148 Ga0495643_0023022 3300046522 Bacteria 3546
149 Ga0495642_0001129 3300046528 Bacteria 12277
150 Ga0495642_0002074 3300046528 Bacteria 8300
151 Ga0495654_0007004 3300046530 Bacteria 6350
152 Ga0495609_0000022 3300046538 Bacteria 279488
153 Ga0495609_0001440 3300046538 Bacteria 15843
154 Ga0495621_0005955 3300046539 Bacteria 3536
155 Ga0495597_0000771 3300046542 Bacteria 25342
156 Ga0495597_0000806 3300046542 Bacteria 24735
157 Ga0495597_0004134 3300046542 Bacteria 8071
158 Ga0495633_0000253 3300046558 Bacteria 63420
159 Ga0495668_0000131 3300046616 Bacteria 112755
160 Ga0495668_0000434 3300046616 Bacteria 53950
161 Ga0495661_0000492 3300046665 Bacteria 41365
162 Ga0495661_0019212 3300046665 Bacteria 4482
163 Ga0495661_0025847 3300046665 Bacteria 3787
164 Ga0495661_0030043 3300046665 Bacteria 3462
165 Ga0495588_0010249 3300046674 Bacteria 4352
166 Ga0495669_0001964 3300046684 Bacteria 8448
167 Ga0495671_0000426 3300046692 Bacteria 33503
168 Ga0495649_0026160 3300046694 Bacteria 3247
169 Ga0495589_0000017 3300046794 Bacteria 206113
170 Ga0495589_0000508 3300046794 Bacteria 27530
171 Ga0495589_0005660 3300046794 Bacteria 6587
172 Ga0495660_0000080 3300046810 Bacteria 103751
173 Ga0495660_0000162 3300046810 Bacteria 71874
174 Ga0495660_0000177 3300046810 Bacteria 69130
175 Ga0495672_0000167 3300047320 Bacteria 95937
176 Ga0495672_0000581 3300047320 Bacteria 41296
177 Ga0495672_0016990 3300047320 Bacteria 4875
178 Ga0495683_0000098 3300047323 Bacteria 88510
179 Ga0495683_0024559 3300047323 Bacteria 3092
180 Ga0495687_000140 3300047443 Bacteria 109311
181 Ga0495687_000175 3300047443 Bacteria 94911
182 Ga0495687_001161 3300047443 Bacteria 25444
183 Ga0495687_003548 3300047443 Bacteria 11222
184 Ga0495677_0000002 3300047445 Bacteria 346767
185 Ga0495677_0000530 3300047445 Bacteria 15886
186 Ga0495681_0000824 3300047470 Bacteria 23910
187 Ga0495686_0006292 3300047472 Bacteria 9129
188 Ga0495626_0000076 3300048091 Bacteria 131125
189 Ga0495626_0000170 3300048091 Bacteria 80445
190 Ga0495626_0001478 3300048091 Bacteria 18552
191 Ga0496102_0000156 3300048905 Bacteria 92538
192 Ga0496102_0000210 3300048905 Bacteria 78438
193 Ga0496110_0000022 3300048913 Bacteria 76181
194 Ga0496114_0004891 3300048917 Bacteria 10434
195 Ga0496117_0000011 3300048920 Bacteria 610930
196 Ga0496117_0000854 3300048920 Bacteria 47114
197 Ga0496118_0000010 3300048921 Bacteria 610930
198 Ga0496119_0000069 3300048922 Bacteria 155265
199 Ga0496120_0000884 3300048923 Bacteria 42219
200 Ga0496121_0009487 3300048924 Bacteria 11172
201 Ga0496121_0019688 3300048924 Bacteria 6733
202 Ga0496122_0005549 3300048925 Bacteria 14949
203 Ga0496124_0000151 3300048927 Bacteria 142761
204 Ga0496125_0000532 3300048928 Bacteria 65618
205 Ga0496125_0012472 3300048928 Bacteria 8433
206 Ga0496126_0000913 3300048929 Bacteria 51086
207 Ga0495678_000745 3300049459 Bacteria 29532
208 nmdc:mga03683_1957_c1 3300050489 Bacteria 6297
209 nmdc:mga05p37_180128_c1 3300050507 Bacteria 2571
210 Ga0495601_0025794 3300053077 Bacteria 3626
211 Ga0500595_002793 3300053119 Bacteria 8415
212 Ga0500574_000379 3300053141 Bacteria 5550

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048920 Ga0496117_0000854 Ga0496117_0000854_11946_13595 511
2 3300039447 Ga0436361_0784532 Ga0436361_0784532_5567_7648 550
3 3300045836 Ga0466958_0000434 Ga0466958_0000434_12955_15024 558
4 3300021388 Ga0213875_10002653 Ga0213875_100026533 561
5 3300037853 Ga0436364_0353649 Ga0436364_0353649_4631_6727 561
6 3300039447 Ga0436361_0041904 Ga0436361_0041904_16398_18479 562
7 3300039447 Ga0436361_0318385 Ga0436361_0318385_19457_21544 562
8 3300021361 Ga0213872_10001017 Ga0213872_1000101719 565
9 3300048927 Ga0496124_0000151 Ga0496124_0000151_125683_127794 570
10 3300031691 Ga0316579_10034496 Ga0316579_100344961 578
11 3300031727 Ga0316576_10003376 Ga0316576_100033768 578
12 3300031733 Ga0316577_10039025 Ga0316577_100390252 578
13 3300032133 Ga0316583_10012471 Ga0316583_100124711 578
14 3300033541 Ga0316596_1004146 Ga0316596_10041461 578
15 3300039438 Ga0436360_0563299 Ga0436360_0563299_4688_6736 578
16 3300031239 Ga0265328_10011172 Ga0265328_100111722 581
17 3300031251 Ga0265327_10000043 Ga0265327_100000438 581
18 3300031456 Ga0307513_10018754 Ga0307513_100187544 581
19 3300031730 Ga0307516_10000202 Ga0307516_1000020233 581
20 3300037471 Ga0395905_0020727 Ga0395905_0020727_3210_5372 582
21 3300039062 Ga0400483_156636 Ga0400483_156636_1801_3849 582
22 3300032133 Ga0316583_10003159 Ga0316583_100031593 583
23 3300036647 Ga0316582_0009748 Ga0316582_0009748_1730_3763 583
24 3300031691 Ga0316579_10013424 Ga0316579_100134242 585
25 3300032139 Ga0316580_10011739 Ga0316580_100117391 585
26 3300033524 Ga0316592_1000379 Ga0316592_10003793 586
27 3300044712 Ga0453684_0050082 Ga0453684_0050082_1077_3146 588
28 3300031090 Ga0265760_10000954 Ga0265760_100009545 589
29 3300009147 Ga0114129_10138612 Ga0114129_101386121 591
30 3300050507 nmdc:mga05p37_180128_c1 nmdc:mga05p37_180128_c1_180_2249 591
31 3300037466 Ga0395898_0004228 Ga0395898_0004228_7173_9371 594
32 3300003761 Ga0055535_1000702 Ga0055535_10007023 596
33 3300003763 Ga0055529_1000340 Ga0055529_100034025 596
34 3300031239 Ga0265328_10025920 Ga0265328_100259201 596
35 3300031250 Ga0265331_10000161 Ga0265331_1000016115 596
36 3300005337 Ga0070682_100009474 Ga0070682_1000094742 597
37 3300025242 Ga0209258_100060 Ga0209258_100060115 597
38 3300025256 Ga0209759_1000663 Ga0209759_10006636 597
39 3300025272 Ga0209455_1000093 Ga0209455_1000093123 597
40 3300031727 Ga0316576_10048475 Ga0316576_100484753 597
41 3300032139 Ga0316580_10006332 Ga0316580_100063322 597
42 3300033524 Ga0316592_1001131 Ga0316592_10011312 597
43 3300035398 Ga0316574_0039453 Ga0316574_0039453_287_2299 597
44 3300046453 Ga0495627_000038 Ga0495627_000038_64461_66557 597
45 3300047472 Ga0495686_0006292 Ga0495686_0006292_4179_6389 598
46 3300015262 Ga0182007_10000118 Ga0182007_1000011848 599
47 3300050489 nmdc:mga03683_1957_c1 nmdc:mga03683_1957_c1_3005_5068 599
48 3300006177 Ga0075362_10005483 Ga0075362_100054832 602
49 3300046538 Ga0495609_0001440 Ga0495609_0001440_2142_4286 602
50 3300046810 Ga0495660_0000177 Ga0495660_0000177_64981_67125 602
51 3300002773 JGI25152J39213_1000060 JGI25152J39213_10000602 603
52 3300003215 JGI25153J46596_10004854 JGI25153J46596_100048546 603
53 3300003775 Ga0055524_1005246 Ga0055524_10052462 603
54 3300025245 Ga0207425_1000017 Ga0207425_1000017290 603
55 3300025258 Ga0209129_1000039 Ga0209129_1000039109 603
56 3300025297 Ga0209758_1000192 Ga0209758_1000192109 603
57 3300025299 Ga0209256_1000207 Ga0209256_100020739 603
58 3300046539 Ga0495621_0005955 Ga0495621_0005955_768_2927 603
59 3300021361 Ga0213872_10000008 Ga0213872_10000008154 604
60 3300026067 Ga0207678_10000473 Ga0207678_100004736 604
61 3300039447 Ga0436361_0048162 Ga0436361_0048162_12496_14667 604
62 3300046616 Ga0495668_0000434 Ga0495668_0000434_22315_24429 604
63 3300021361 Ga0213872_10000248 Ga0213872_1000024841 605
64 3300039447 Ga0436361_0182416 Ga0436361_0182416_10887_13061 605
65 3300003759 Ga0055525_1000026 Ga0055525_1000026129 606
66 3300025230 Ga0209563_100005 Ga0209563_1000051465 606
67 3300009092 Ga0105250_10000010 Ga0105250_1000001083 607
68 3300014968 Ga0157379_10001470 Ga0157379_1000147019 607
69 3300025711 Ga0207696_1000133 Ga0207696_100013340 607
70 3300048925 Ga0496122_0005549 Ga0496122_0005549_10734_12761 607
71 3300013102 Ga0157371_10000184 Ga0157371_1000018419 608
72 3300013308 Ga0157375_10117224 Ga0157375_101172241 608
73 3300015265 Ga0182005_1001582 Ga0182005_10015828 608
74 3300031824 Ga0307413_10005158 Ga0307413_100051583 608
75 3300031852 Ga0307410_10017031 Ga0307410_100170314 608
76 3300031903 Ga0307407_10001896 Ga0307407_100018967 608
77 3300048922 Ga0496119_0000069 Ga0496119_0000069_30513_32540 608
78 3300048923 Ga0496120_0000884 Ga0496120_0000884_39473_41500 608
79 3300048924 Ga0496121_0019688 Ga0496121_0019688_4313_6340 608
80 3300048928 Ga0496125_0012472 Ga0496125_0012472_4102_6129 608
81 3300048929 Ga0496126_0000913 Ga0496126_0000913_39410_41437 608
82 iso_pu_bacteria 2643221695 2644530083 609
83 iso_pu_bacteria 2883291878 2883293951 609
84 iso_pu_bacteria 2883354860 2883357511 609
85 iso_pu_bacteria 2919513703 2919516034 609
86 iso_pu_bacteria 2919675420 2919677847 609
87 3300039110 Ga0400487_41006 Ga0400487_41006_20553_22640 611
88 3300005981 Ga0081538_10002827 Ga0081538_1000282718 614
89 3300046522 Ga0495643_0006368 Ga0495643_0006368_3939_6056 614
90 3300047443 Ga0495687_001161 Ga0495687_001161_17739_19856 614
91 3300044656 Ga0466969_0000002 Ga0466969_0000002_98943_101144 615
92 3300046471 Ga0495650_0000048 Ga0495650_0000048_301216_303321 615
93 3300047443 Ga0495687_000140 Ga0495687_000140_45666_47876 616
94 3300045049 Ga0466959_0016106 Ga0466959_0016106_2295_4535 617
95 iso_pu_bacteria 2524614729 2525558488 617
96 iso_pu_bacteria 2627854209 2630650470 617
97 3300025933 Ga0207706_10008572 Ga0207706_100085722 618
98 3300044658 Ga0466972_0003572 Ga0466972_0003572_744_2945 618
99 3300005457 Ga0070662_100003230 Ga0070662_1000032307 619
100 3300046542 Ga0495597_0004134 Ga0495597_0004134_5208_7382 619
101 3300047320 Ga0495672_0016990 Ga0495672_0016990_940_3114 619
102 3300038443 Ga0395901_0110526 Ga0395901_0110526_779_2830 622
103 3300044693 Ga0466961_0005212 Ga0466961_0005212_1151_3358 622
104 3300046507 Ga0495606_0002601 Ga0495606_0002601_1467_3503 622
105 3300044656 Ga0466969_0018429 Ga0466969_0018429_1243_3450 623
106 3300044694 Ga0466963_0016379 Ga0466963_0016379_1803_4010 623
107 3300044706 Ga0466964_0003737 Ga0466964_0003737_3224_5431 623
108 3300044842 Ga0466957_0019707 Ga0466957_0019707_39_2246 623
109 3300045049 Ga0466959_0000793 Ga0466959_0000793_7128_9335 623
110 3300046492 Ga0495585_0012294 Ga0495585_0012294_1979_4168 623
111 3300039447 Ga0436361_1063608 Ga0436361_1063608_189_2318 624
112 3300046810 Ga0495660_0000080 Ga0495660_0000080_1992_4151 624
113 3300046542 Ga0495597_0000806 Ga0495597_0000806_7653_9863 626
114 3300046457 Ga0495590_0007131 Ga0495590_0007131_827_3040 627
115 3300046522 Ga0495643_0023022 Ga0495643_0023022_375_2588 627
116 3300046530 Ga0495654_0007004 Ga0495654_0007004_3662_5875 627
117 3300046616 Ga0495668_0000131 Ga0495668_0000131_62930_65143 627
118 3300047470 Ga0495681_0000824 Ga0495681_0000824_4531_6690 627
119 3300049459 Ga0495678_000745 Ga0495678_000745_20581_22794 627
120 3300003771 Ga0055526_1013226 Ga0055526_10132263 629
121 3300003775 Ga0055524_1005459 Ga0055524_10054594 629
122 3300025208 Ga0209436_100863 Ga0209436_1008635 629
123 3300025284 Ga0209130_1005862 Ga0209130_10058622 629
124 3300025298 Ga0209050_1000168 Ga0209050_100016841 629
125 3300025304 Ga0209257_1000806 Ga0209257_100080627 629
126 3300048091 Ga0495626_0000076 Ga0495626_0000076_81700_83889 629
127 3300025245 Ga0207425_1000331 Ga0207425_10003317 630
128 3300025284 Ga0209130_1005857 Ga0209130_10058573 630
129 3300025299 Ga0209256_1001310 Ga0209256_100131014 630
130 3300046558 Ga0495633_0000253 Ga0495633_0000253_27015_29138 631
131 3300002987 JGI25159J45721_1001855 JGI25159J45721_10018556 632
132 3300046491 Ga0495584_0004192 Ga0495584_0004192_1295_3421 633
133 3300046501 Ga0495607_0000727 Ga0495607_0000727_913_3039 633
134 3300046513 Ga0495616_0011660 Ga0495616_0011660_2738_4864 633
135 3300046538 Ga0495609_0000022 Ga0495609_0000022_42909_45035 633
136 3300046665 Ga0495661_0000492 Ga0495661_0000492_1943_4069 633
137 3300046794 Ga0495589_0000017 Ga0495589_0000017_7410_9536 633
138 3300047443 Ga0495687_000175 Ga0495687_000175_42883_45009 633
139 3300047445 Ga0495677_0000002 Ga0495677_0000002_31504_33630 633
140 3300048091 Ga0495626_0001478 Ga0495626_0001478_1917_4043 633
141 3300014497 Ga0182008_10001405 Ga0182008_100014056 636
142 3300015261 Ga0182006_1000004 Ga0182006_1000004450 636
143 3300015265 Ga0182005_1000030 Ga0182005_1000030110 636
144 3300048920 Ga0496117_0000011 Ga0496117_0000011_487800_489923 636
145 3300048921 Ga0496118_0000010 Ga0496118_0000010_121008_123131 636
146 3300048924 Ga0496121_0009487 Ga0496121_0009487_2411_4534 636
147 3300044658 Ga0466972_0000088 Ga0466972_0000088_3071_5335 639
148 3300048917 Ga0496114_0004891 Ga0496114_0004891_2938_5085 640
149 3300048928 Ga0496125_0000532 Ga0496125_0000532_9218_11365 640
150 3300048905 Ga0496102_0000210 Ga0496102_0000210_31285_33447 641
151 3300046492 Ga0495585_0014329 Ga0495585_0014329_435_2564 642
152 3300046665 Ga0495661_0030043 Ga0495661_0030043_563_2692 642
153 3300046452 Ga0495617_000026 Ga0495617_000026_97692_99869 645
154 3300046453 Ga0495627_000043 Ga0495627_000043_75658_77835 645
155 3300046474 Ga0495605_0000113 Ga0495605_0000113_44090_46267 645
156 3300046491 Ga0495584_0000252 Ga0495584_0000252_25778_27913 645
157 3300046492 Ga0495585_0000672 Ga0495585_0000672_962_3097 645
158 3300046501 Ga0495607_0001791 Ga0495607_0001791_9305_11482 645
159 3300046518 Ga0495631_0002923 Ga0495631_0002923_436_2613 645
160 3300046528 Ga0495642_0002074 Ga0495642_0002074_1913_4090 645
161 3300046665 Ga0495661_0025847 Ga0495661_0025847_326_2503 645
162 3300046692 Ga0495671_0000426 Ga0495671_0000426_30262_32439 645
163 3300046794 Ga0495589_0005660 Ga0495589_0005660_1108_3285 645
164 3300047323 Ga0495683_0000098 Ga0495683_0000098_50755_52890 645
165 3300046694 Ga0495649_0026160 Ga0495649_0026160_476_2674 646
166 3300047320 Ga0495672_0000167 Ga0495672_0000167_71109_73328 646
167 3300048913 Ga0496110_0000022 Ga0496110_0000022_73138_75348 646
168 iso_pu_bacteria 2857547612 2857549722 646
169 iso_pu_bacteria 2885080285 2885082300 646
170 iso_pu_bacteria 2919476304 2919480892 646
171 3300015262 Ga0182007_10000017 Ga0182007_1000001767 647
172 3300025254 Ga0209148_1000203 Ga0209148_100020363 648
173 3300038443 Ga0395901_0093747 Ga0395901_0093747_608_2761 650
174 3300046474 Ga0495605_0000186 Ga0495605_0000186_61467_63677 652
175 3300046501 Ga0495607_0006162 Ga0495607_0006162_4252_6462 652
176 3300046522 Ga0495643_0000206 Ga0495643_0000206_66750_68912 652
177 3300046522 Ga0495643_0008875 Ga0495643_0008875_636_2846 652
178 3300046542 Ga0495597_0000771 Ga0495597_0000771_6966_9167 652
179 3300046665 Ga0495661_0019212 Ga0495661_0019212_1362_3572 652
180 3300046794 Ga0495589_0000508 Ga0495589_0000508_17280_19490 652
181 3300046810 Ga0495660_0000162 Ga0495660_0000162_65502_67712 652
182 3300047320 Ga0495672_0000581 Ga0495672_0000581_11592_13802 652
183 3300047323 Ga0495683_0024559 Ga0495683_0024559_198_2408 652
184 3300047443 Ga0495687_003548 Ga0495687_003548_1857_4067 652
185 3300047445 Ga0495677_0000530 Ga0495677_0000530_9620_11830 652
186 3300048091 Ga0495626_0000170 Ga0495626_0000170_57779_59989 652
187 3300046506 Ga0495583_0001150 Ga0495583_0001150_12106_14268 653
188 3300046492 Ga0495585_0025018 Ga0495585_0025018_481_2682 654
189 3300046506 Ga0495583_0018153 Ga0495583_0018153_941_3112 654
190 3300046513 Ga0495616_0000048 Ga0495616_0000048_37719_39884 654
191 3300037312 Ga0395899_0002457 Ga0395899_0002457_37_2193 657
192 3300048905 Ga0496102_0000156 Ga0496102_0000156_86320_88497 659
193 3300044684 Ga0466966_0043688 Ga0466966_0043688_529_2700 660
194 iso_pu_bacteria 2643221556 2643800335 665
195 iso_pu_bacteria 2643221684 2644471885 665
196 3300046506 Ga0495583_0000203 Ga0495583_0000203_81921_84179 666
197 iso_pu_bacteria 8047673197 8047675203 666
198 3300046519 Ga0495632_0000152 Ga0495632_0000152_37173_39374 667
199 3300046528 Ga0495642_0001129 Ga0495642_0001129_1885_4077 667
200 3300046674 Ga0495588_0010249 Ga0495588_0010249_1835_4027 669
201 3300046684 Ga0495669_0001964 Ga0495669_0001964_5512_7704 669
202 iso_pu_bacteria 2643221603 2644030414 682
203 3300046463 Ga0495653_0019617 Ga0495653_0019617_1275_3797 709
204 3300053119 Ga0500595_002793 Ga0500595_002793_2227_4701 709
205 3300053141 Ga0500574_000379 Ga0500574_000379_790_3312 709
206 3300015262 Ga0182007_10003779 Ga0182007_100037791 714
207 3300046511 Ga0495608_0039188 Ga0495608_0039188_273_2762 714
208 3300002737 JGI25162J39368_1000001 JGI25162J39368_1000001262 715
209 3300003214 JGI25165J46597_1000001 JGI25165J46597_1000001256 715
210 3300003751 Ga0055538_1000001 Ga0055538_1000001776 715
211 3300003752 Ga0055539_1000001 Ga0055539_1000001776 715
212 3300003756 Ga0055533_1000003 Ga0055533_1000003256 715
213 3300003759 Ga0055525_1000003 Ga0055525_1000003256 715
214 3300003841 Ga0055541_1000001 Ga0055541_1000001256 715
215 3300015261 Ga0182006_1011315 Ga0182006_10113153 715
216 3300015265 Ga0182005_1000158 Ga0182005_100015841 715
217 3300025224 Ga0209784_100004 Ga0209784_100004256 715
218 3300025225 Ga0209566_100004 Ga0209566_100004413 715
219 3300025226 Ga0209674_100006 Ga0209674_100006413 715
220 3300025230 Ga0209563_100009 Ga0209563_100009256 715
221 3300025233 Ga0209437_100004 Ga0209437_100004256 715
222 3300025253 Ga0209677_100005 Ga0209677_100005256 715
223 3300025261 Ga0209233_1000005 Ga0209233_1000005413 715
224 3300046462 Ga0495651_0004636 Ga0495651_0004636_1059_3560 715
225 3300046516 Ga0495628_0000707 Ga0495628_0000707_27133_29634 715
226 3300053077 Ga0495601_0025794 Ga0495601_0025794_704_3172 715

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03030

H_PPase

Inorganic H+ pyrophosphatase

9

666

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2aiz-assembly1.cif.gz_P solution structure of peptidoglycan associated lipoprotein from haemophilus influenza bound to udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine 0.791 639 713
5n2c-assembly1.cif.gz_A crystal structure of the peptidoglycan-associated lipoprotein from burkholderia cenocepacia 0.7852 639 715
2n48-assembly1.cif.gz_A ec-nmr structure of escherichia coli yiad determined by combining evolutionary couplings (ec) and sparse nmr data. northeast structural genomics consortium target er553 0.7841 634 715
5u1h-assembly3.cif.gz_C crystal structure of the c-terminal peptidoglycan binding domain of oprf (pa1777) from pseudomonas aeruginosa 0.7756 633 714
2hqs-assembly1.cif.gz_H crystal structure of tolb/pal complex 0.7745 635 713
ID Description Score Start End Superfamily
af_P0A910_199_343_3.30.1330.60 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.7773 633 693 3.30.1330.60
5wtpB00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.7535 639 715 3.30.1330.60
6jfwA00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.7083 631 715 3.30.1330.60
2lcaA00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.6767 625 715 3.30.1330.60
2w8bC00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.6408 625 713 3.30.1330.60
ID Description Score Start End GO Terms
AF-X1QWN9-F1-model_v4 Sodium-translocating pyrophosphatase 0.949 5 181 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-X1U8P2-F1-model_v4 H(+)-exporting diphosphatase 0.932 217 457 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-X1QWN9-F1-model_v4 Sodium-translocating pyrophosphatase 0.9276 5 181 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-A0A7C7H9I8-F1-model_v4 Sodium-translocating pyrophosphatase (EC 3.6.1.1) 0.9273 1 457 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-A0A7W1PZN8-F1-model_v4 Sodium/proton-translocating pyrophosphatase 0.9243 5 178 GO:0004427
GO:0009678
GO:0012505
GO:0016020

Feature Viewer

pLDDT pTM Quality
69.69 0.68 Medium
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Predicted Structure (AlphaFold2)

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