F338855

General Info

Members Datasets Scaffolds Average Seq Length
226 175 452 547

Family's Representative Sequence

Representative Sequence 3300013102|Ga0157371_10001374|Ga0157371_1000137416
Length 576
Sequence VRGKRIAQIIARHRHERSNKMAADLYADYVIVGAGSAGCVLAARLTESGKHKVVLLEAGGDDRVLHAALHEPGQVWSNLMIHTPIGFGKTLNDPKVNWLYETEVDEGSGGRKHKWPKGKVLGGSSSINGMLYVRGQSADYDGWAQMGARGWSWDEVLPYFRKSENQERGENEFHGTGGPLSVSDFPEEHPVSAAIVQACQQIGIPYKADLNDGNQEGCSFFQMTARNGRRSSAAVAYLHPAMKRPNLLVEKRAMTTKILWDGKKAIGVEFRQNGETRRAIAAREVIVSAGSVESPKLLEISGVGQGALLRELGVPVVHESRMVGENMQDHYMIGCQAALKEPHHSINELSRGVKLLGQIAKYGLTRKGLLSYAVAHGCAFVKSRDELMYPDIQIHVMAASMDLEYLNQYQGLRLDKEPGLASNPCQLRPESRGSIHAKSPDGMERPKIVPNYLSDPLDKQSVVDQLKIIRKIWQQPALEPYMKNKGDPFGDTDEAMLGYAKVAGGTLYHAVGTVAMGDERFPLDPQLKVRGVENLRVIDASAMPKISSGNTNAPTIMIAEKGAEMVLQDAKEAVAA

Samples

Sample ID Description Type Environment
1 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
41 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
43 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
71 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
72 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
82 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
86 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
92 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
108 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
109 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
120 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
156 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
159 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
160 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
166 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
167 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
168 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
169 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
170 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
171 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
172 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
173 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
174 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
175 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.36
Metatranscriptomes 0.44
Isolates 6.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.27
Nodule 0.44
Rhizoplane 3.54
Rhizosphere 77.88
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157371_10001374 3300013102 Bacteria 25505
2 JGI25153J46596_10000066 3300003215 Bacteria 123268
3 Ga0065707_10088130 3300005295 Bacteria 4763
4 Ga0070683_100197839 3300005329 Bacteria 1909
5 Ga0070666_10009314 3300005335 Bacteria 6118
6 Ga0070680_100000351 3300005336 Bacteria 30952
7 Ga0070660_100000302 3300005339 Bacteria 32774
8 Ga0070660_100013761 3300005339 Bacteria 5818
9 Ga0070661_100001043 3300005344 Bacteria 19572
10 Ga0070659_100012122 3300005366 Bacteria 6385
11 Ga0070710_10014837 3300005437 Bacteria 3928
12 Ga0070711_100109327 3300005439 Bacteria 2026
13 Ga0070662_100001241 3300005457 Bacteria 15651
14 Ga0070662_100023873 3300005457 Bacteria 4206
15 Ga0070681_10020535 3300005458 Bacteria 6620
16 Ga0070707_100123573 3300005468 Bacteria 2513
17 Ga0070699_100168629 3300005518 Bacteria 1939
18 Ga0070679_100000815 3300005530 Bacteria 27015
19 Ga0070679_100024103 3300005530 Bacteria 5962
20 Ga0068853_100000781 3300005539 Bacteria 22103
21 Ga0068855_100004060 3300005563 Bacteria 17865
22 Ga0068855_100052964 3300005563 Bacteria 4776
23 Ga0070664_100003387 3300005564 Bacteria 12873
24 Ga0068862_100054140 3300005844 Bacteria 3436
25 Ga0081538_10007966 3300005981 Bacteria 9063
26 Ga0081538_10010914 3300005981 Bacteria 7401
27 Ga0075365_10026584 3300006038 Bacteria 3675
28 Ga0075363_100003303 3300006048 Bacteria 6833
29 Ga0075367_10000606 3300006178 Bacteria 13778
30 Ga0075433_10035876 3300006852 Bacteria 4267
31 Ga0075434_100001235 3300006871 Bacteria 21236
32 Ga0075435_100039545 3300007076 Bacteria 3764
33 Ga0105250_10000013 3300009092 Bacteria 271050
34 Ga0105240_10100128 3300009093 Bacteria 3527
35 Ga0111539_10000520 3300009094 Bacteria 48692
36 Ga0111539_10133757 3300009094 Bacteria 2903
37 Ga0105237_10202639 3300009545 Bacteria 1985
38 Ga0105246_10000423 3300011119 Bacteria 22570
39 Ga0157370_10001318 3300013104 Bacteria 30920
40 Ga0157369_10018753 3300013105 Bacteria 7756
41 Ga0157372_10000795 3300013307 Bacteria 34249
42 Ga0157372_10036327 3300013307 Bacteria 5430
43 Ga0182008_10003350 3300014497 Bacteria 9726
44 Ga0157379_10000838 3300014968 Bacteria 24910
45 Ga0206350_11560909 3300020080 Unclassified 2500
46 Ga0209148_1000599 3300025254 Bacteria 32537
47 Ga0209233_1001297 3300025261 Bacteria 9992
48 Ga0209455_1000603 3300025272 Bacteria 22901
49 Ga0209758_1000028 3300025297 Bacteria 530102
50 Ga0209758_1025420 3300025297 Bacteria 2599
51 Ga0209758_1038632 3300025297 Bacteria 1828
52 Ga0209257_1000707 3300025304 Bacteria 51654
53 Ga0207696_1000072 3300025711 Bacteria 224214
54 Ga0207705_10003905 3300025909 Bacteria 11336
55 Ga0207707_10074968 3300025912 Bacteria 2951
56 Ga0207671_10071479 3300025914 Bacteria 2588
57 Ga0207657_10000204 3300025919 Bacteria 61073
58 Ga0207649_10009745 3300025920 Bacteria 5261
59 Ga0207652_10001330 3300025921 Bacteria 21941
60 Ga0207652_10009449 3300025921 Bacteria 7842
61 Ga0207652_10129797 3300025921 Bacteria 2247
62 Ga0207681_10054367 3300025923 Bacteria 2722
63 Ga0207690_10000429 3300025932 Bacteria 27386
64 Ga0207706_10000371 3300025933 Bacteria 48690
65 Ga0207706_10002513 3300025933 Bacteria 17880
66 Ga0207669_10004538 3300025937 Bacteria 6127
67 Ga0207667_10000862 3300025949 Bacteria 39077
68 Ga0207639_10005840 3300026041 Bacteria 8338
69 Ga0207702_10094565 3300026078 Bacteria 2624
70 Ga0207674_10025177 3300026116 Bacteria 6349
71 Ga0207428_10000059 3300027907 Bacteria 156543
72 Ga0265356_1000697 3300028017 Bacteria 5773
73 Ga0268265_10022148 3300028380 Bacteria 4460
74 Ga0265336_10000336 3300028666 Bacteria 31151
75 Ga0265327_10040704 3300031251 Bacteria 2511
76 Ga0307508_10000008 3300031616 Bacteria 265023
77 Ga0265314_10015099 3300031711 Bacteria 6143
78 Ga0307516_10061637 3300031730 Bacteria 3638
79 Ga0307413_10018560 3300031824 Bacteria 3654
80 Ga0307414_10005797 3300032004 Bacteria 6832
81 Ga0307411_10052954 3300032005 Bacteria 2656
82 Ga0373953_0000007 3300035117 Bacteria 53109
83 Ga0373954_0004191 3300035118 Bacteria 6181
84 Ga0373954_0007512 3300035118 Bacteria 4769
85 Ga0373956_0023815 3300035119 Bacteria 2631
86 Ga0373955_0000041 3300035172 Bacteria 51219
87 Ga0373933_0000246 3300035724 Bacteria 35782
88 Ga0373937_0000172 3300036401 Bacteria 63213
89 Ga0395898_0096743 3300037466 Bacteria 2836
90 Ga0395901_0003362 3300038443 Bacteria 16112
91 Ga0395901_0051115 3300038443 Bacteria 4296
92 Ga0436365_0889141 3300039437 Bacteria 8729
93 Ga0439462_0000412 3300042015 Bacteria 8288
94 Ga0466967_0076920 3300045976 Bacteria 3003
95 Ga0466967_0290772 3300045976 Bacteria 1570
96 Ga0495592_0000569 3300046454 Bacteria 26145
97 Ga0495590_0000797 3300046457 Bacteria 14365
98 Ga0495651_0000118 3300046462 Bacteria 58414
99 Ga0495651_0002134 3300046462 Bacteria 15297
100 Ga0495651_0036878 3300046462 Bacteria 3806
101 Ga0495653_0004409 3300046463 Bacteria 11381
102 Ga0495650_0003461 3300046471 Bacteria 11505
103 Ga0495650_0004768 3300046471 Bacteria 9113
104 Ga0495583_0000667 3300046506 Bacteria 44963
105 Ga0495606_0004179 3300046507 Bacteria 14636
106 Ga0495608_0000156 3300046511 Bacteria 48856
107 Ga0495616_0018592 3300046513 Bacteria 3810
108 Ga0495628_0018635 3300046516 Bacteria 5746
109 Ga0495643_0000154 3300046522 Bacteria 112250
110 Ga0495648_0001284 3300046524 Bacteria 25056
111 Ga0495652_0000436 3300046529 Bacteria 48806
112 Ga0495652_0060217 3300046529 Bacteria 3209
113 Ga0495654_0024323 3300046530 Bacteria 3131
114 Ga0495587_0000045 3300046536 Bacteria 108362
115 Ga0495667_0000051 3300046559 Bacteria 109277
116 Ga0495667_0020083 3300046559 Bacteria 4506
117 Ga0495625_0003336 3300046660 Bacteria 16163
118 Ga0495635_0031541 3300046663 Bacteria 3678
119 Ga0495657_0000044 3300046675 Bacteria 108383
120 Ga0495599_0000127 3300046678 Bacteria 48710
121 Ga0495599_0020891 3300046678 Bacteria 4081
122 Ga0495623_0000361 3300046679 Bacteria 29762
123 Ga0495646_0026115 3300046680 Bacteria 3669
124 Ga0495649_0000193 3300046694 Bacteria 53692
125 Ga0495600_0002184 3300046809 Bacteria 11112
126 Ga0495600_0048680 3300046809 Bacteria 2765
127 Ga0495604_0000046 3300047317 Bacteria 110553
128 Ga0495680_0000108 3300047322 Bacteria 77095
129 Ga0495683_0001843 3300047323 Bacteria 13308
130 Ga0495675_0000119 3300047444 Bacteria 57079
131 Ga0495675_0014392 3300047444 Bacteria 4997
132 Ga0495673_0000547 3300047469 Bacteria 38376
133 Ga0495602_0000167 3300048088 Bacteria 61216
134 Ga0495602_0032136 3300048088 Bacteria 4946
135 Ga0495626_0005601 3300048091 Bacteria 7283
136 Ga0496100_0069606 3300048903 Bacteria 2344
137 Ga0496104_0035135 3300048907 Bacteria 4678
138 Ga0496105_0008501 3300048908 Bacteria 7974
139 Ga0496108_0057363 3300048911 Bacteria 3272
140 Ga0496109_0038895 3300048912 Bacteria 4303
141 Ga0496109_0050958 3300048912 Bacteria 3770
142 Ga0496112_0003914 3300048915 Bacteria 12459
143 Ga0496112_0032606 3300048915 Bacteria 5059
144 Ga0496122_0000182 3300048925 Bacteria 148360
145 Ga0496123_0000210 3300048926 Bacteria 118956
146 Ga0495682_0000488 3300049460 Bacteria 27383
147 Ga0501032_0019680 3300049569 Bacteria 4716
148 Ga0501032_0084549 3300049569 Bacteria 2109
149 Ga0501033_0010152 3300049570 Bacteria 7229
150 Ga0501033_0034064 3300049570 Bacteria 3821
151 Ga0501033_0072308 3300049570 Bacteria 2532
152 Ga0501034_0001880 3300049571 Bacteria 26610
153 Ga0501034_0060356 3300049571 Bacteria 3809
154 Ga0501034_0076987 3300049571 Bacteria 3342
155 Ga0501034_0127059 3300049571 Bacteria 2534
156 Ga0501036_0011016 3300049572 Bacteria 7479
157 Ga0501036_0038025 3300049572 Bacteria 4072
158 Ga0501037_0002959 3300049573 Bacteria 12321
159 Ga0501038_0001970 3300049574 Bacteria 18956
160 Ga0501039_0001598 3300049575 Bacteria 16684
161 Ga0501043_0000364 3300049579 Bacteria 40997
162 Ga0501043_0110641 3300049579 Bacteria 2157
163 Ga0501046_0000867 3300049580 Bacteria 29435
164 Ga0501046_0027656 3300049580 Bacteria 4625
165 Ga0501047_0002778 3300049581 Bacteria 16634
166 Ga0501047_0003590 3300049581 Bacteria 14640
167 Ga0501047_0134531 3300049581 Bacteria 2352
168 Ga0501048_0054344 3300049582 Bacteria 2845
169 Ga0501067_0018285 3300049583 Bacteria 3883
170 Ga0501068_0013675 3300049584 Bacteria 4622
171 Ga0501069_0000543 3300049585 Bacteria 17268
172 Ga0501070_0022052 3300049586 Bacteria 5335
173 Ga0501070_0023417 3300049586 Bacteria 5173
174 Ga0501073_0000620 3300049589 Bacteria 25004
175 Ga0501073_0023998 3300049589 Bacteria 4379
176 Ga0501074_0023287 3300049590 Bacteria 4503
177 Ga0501080_0003885 3300049742 Bacteria 13223
178 Ga0501083_0004113 3300049744 Bacteria 10239
179 Ga0501083_0011679 3300049744 Bacteria 6158
180 Ga0501035_0034385 3300049822 Bacteria 4605
181 Ga0501044_0007987 3300049823 Bacteria 11625
182 Ga0501044_0008194 3300049823 Bacteria 11467
183 Ga0501044_0025315 3300049823 Bacteria 6288
184 Ga0501045_0153115 3300049824 Bacteria 1716
185 nmdc:mga03n38_2557_c1 3300050490 Bacteria 5651
186 nmdc:mga0yw44_38079_c1 3300050492 Bacteria 2843
187 nmdc:mga0k408_12280_c1 3300050493 Bacteria 4681
188 nmdc:mga06z11_1301_c1 3300050494 Bacteria 9228
189 nmdc:mga08y16_16_c1 3300050511 Bacteria 386948
190 nmdc:mga0n895_412_c1 3300050512 Bacteria 28731
191 nmdc:mga0rr50_8603_c1 3300050513 Bacteria 6360
192 nmdc:mga0a205_7322_c1 3300050515 Bacteria 9988
193 Ga0495601_0006998 3300053077 Bacteria 6608
194 Ga0495612_0000192 3300053078 Bacteria 25973
195 Ga0500578_0086858 3300053086 Bacteria 1987
196 Ga0500643_000001 3300053087 Bacteria 1440111
197 Ga0500643_000741 3300053087 Bacteria 21279
198 Ga0500643_014612 3300053087 Bacteria 2721
199 Ga0500646_0020925 3300053090 Bacteria 1740
200 Ga0500641_0004455 3300053096 Bacteria 4951
201 Ga0500556_0000031 3300053104 Bacteria 156000
202 Ga0500594_0003713 3300053118 Bacteria 3364
203 Ga0500595_003911 3300053119 Bacteria 6830
204 Ga0500642_0000003 3300053130 Bacteria 544899
205 Ga0500642_0001252 3300053130 Bacteria 7258
206 Ga0500642_0073967 3300053130 Bacteria 1554
207 Ga0500616_0000539 3300053153 Bacteria 47314
208 Ga0500616_0002671 3300053153 Bacteria 14498
209 Ga0500645_000673 3300053730 Bacteria 21446
210 Ga0501084_0007504 3300054114 Bacteria 8990
211 Ga0501082_0001879 3300060353 Bacteria 18478
212 Ga0501082_0057797 3300060353 Bacteria 3341
213 2509149356 2508501128 Bacteria 8613869
214 2585294966 2582581311 Bacteria 6763856
215 2585295664 2582581311 Bacteria 6763856
216 2643951581 2643221588 Bacteria 3692460
217 2830077581 2830075706 Bacteria 3855215
218 2830079187 2830075706 Bacteria 3855215
219 2929200344 2929199973 Bacteria 7260745
220 2935393627 2935390628 Bacteria 7043367
221 2996339560 2996336353 Bacteria 5511628
222 2996341420 2996336353 Bacteria 5511628
223 3000867145 3000865235 Bacteria 3106258
224 3006491872 3006486233 Bacteria 8157040
225 8006926817 8006926726 Bacteria 6749210
226 8055912478 8055909800 Bacteria 7278581
227 Ga0157371_10001374
228 JGI25153J46596_10000066
229 Ga0065707_10088130
230 Ga0070683_100197839
231 Ga0070666_10009314
232 Ga0070680_100000351
233 Ga0070660_100000302
234 Ga0070660_100013761
235 Ga0070661_100001043
236 Ga0070659_100012122
237 Ga0070710_10014837
238 Ga0070711_100109327
239 Ga0070662_100001241
240 Ga0070662_100023873
241 Ga0070681_10020535
242 Ga0070707_100123573
243 Ga0070699_100168629
244 Ga0070679_100000815
245 Ga0070679_100024103
246 Ga0068853_100000781
247 Ga0068855_100004060
248 Ga0068855_100052964
249 Ga0070664_100003387
250 Ga0068862_100054140
251 Ga0081538_10007966
252 Ga0081538_10010914
253 Ga0075365_10026584
254 Ga0075363_100003303
255 Ga0075367_10000606
256 Ga0075433_10035876
257 Ga0075434_100001235
258 Ga0075435_100039545
259 Ga0105250_10000013
260 Ga0105240_10100128
261 Ga0111539_10000520
262 Ga0111539_10133757
263 Ga0105237_10202639
264 Ga0105246_10000423
265 Ga0157370_10001318
266 Ga0157369_10018753
267 Ga0157372_10000795
268 Ga0157372_10036327
269 Ga0182008_10003350
270 Ga0157379_10000838
271 Ga0206350_11560909
272 Ga0209148_1000599
273 Ga0209233_1001297
274 Ga0209455_1000603
275 Ga0209758_1000028
276 Ga0209758_1025420
277 Ga0209758_1038632
278 Ga0209257_1000707
279 Ga0207696_1000072
280 Ga0207705_10003905
281 Ga0207707_10074968
282 Ga0207671_10071479
283 Ga0207657_10000204
284 Ga0207649_10009745
285 Ga0207652_10001330
286 Ga0207652_10009449
287 Ga0207652_10129797
288 Ga0207681_10054367
289 Ga0207690_10000429
290 Ga0207706_10000371
291 Ga0207706_10002513
292 Ga0207669_10004538
293 Ga0207667_10000862
294 Ga0207639_10005840
295 Ga0207702_10094565
296 Ga0207674_10025177
297 Ga0207428_10000059
298 Ga0265356_1000697
299 Ga0268265_10022148
300 Ga0265336_10000336
301 Ga0265327_10040704
302 Ga0307508_10000008
303 Ga0265314_10015099
304 Ga0307516_10061637
305 Ga0307413_10018560
306 Ga0307414_10005797
307 Ga0307411_10052954
308 Ga0373953_0000007
309 Ga0373954_0004191
310 Ga0373954_0007512
311 Ga0373956_0023815
312 Ga0373955_0000041
313 Ga0373933_0000246
314 Ga0373937_0000172
315 Ga0395898_0096743
316 Ga0395901_0003362
317 Ga0395901_0051115
318 Ga0436365_0889141
319 Ga0439462_0000412
320 Ga0466967_0076920
321 Ga0466967_0290772
322 Ga0495592_0000569
323 Ga0495590_0000797
324 Ga0495651_0000118
325 Ga0495651_0002134
326 Ga0495651_0036878
327 Ga0495653_0004409
328 Ga0495650_0003461
329 Ga0495650_0004768
330 Ga0495583_0000667
331 Ga0495606_0004179
332 Ga0495608_0000156
333 Ga0495616_0018592
334 Ga0495628_0018635
335 Ga0495643_0000154
336 Ga0495648_0001284
337 Ga0495652_0000436
338 Ga0495652_0060217
339 Ga0495654_0024323
340 Ga0495587_0000045
341 Ga0495667_0000051
342 Ga0495667_0020083
343 Ga0495625_0003336
344 Ga0495635_0031541
345 Ga0495657_0000044
346 Ga0495599_0000127
347 Ga0495599_0020891
348 Ga0495623_0000361
349 Ga0495646_0026115
350 Ga0495649_0000193
351 Ga0495600_0002184
352 Ga0495600_0048680
353 Ga0495604_0000046
354 Ga0495680_0000108
355 Ga0495683_0001843
356 Ga0495675_0000119
357 Ga0495675_0014392
358 Ga0495673_0000547
359 Ga0495602_0000167
360 Ga0495602_0032136
361 Ga0495626_0005601
362 Ga0496100_0069606
363 Ga0496104_0035135
364 Ga0496105_0008501
365 Ga0496108_0057363
366 Ga0496109_0038895
367 Ga0496109_0050958
368 Ga0496112_0003914
369 Ga0496112_0032606
370 Ga0496122_0000182
371 Ga0496123_0000210
372 Ga0495682_0000488
373 Ga0501032_0019680
374 Ga0501032_0084549
375 Ga0501033_0010152
376 Ga0501033_0034064
377 Ga0501033_0072308
378 Ga0501034_0001880
379 Ga0501034_0060356
380 Ga0501034_0076987
381 Ga0501034_0127059
382 Ga0501036_0011016
383 Ga0501036_0038025
384 Ga0501037_0002959
385 Ga0501038_0001970
386 Ga0501039_0001598
387 Ga0501043_0000364
388 Ga0501043_0110641
389 Ga0501046_0000867
390 Ga0501046_0027656
391 Ga0501047_0002778
392 Ga0501047_0003590
393 Ga0501047_0134531
394 Ga0501048_0054344
395 Ga0501067_0018285
396 Ga0501068_0013675
397 Ga0501069_0000543
398 Ga0501070_0022052
399 Ga0501070_0023417
400 Ga0501073_0000620
401 Ga0501073_0023998
402 Ga0501074_0023287
403 Ga0501080_0003885
404 Ga0501083_0004113
405 Ga0501083_0011679
406 Ga0501035_0034385
407 Ga0501044_0007987
408 Ga0501044_0008194
409 Ga0501044_0025315
410 Ga0501045_0153115
411 nmdc:mga03n38_2557_c1
412 nmdc:mga0yw44_38079_c1
413 nmdc:mga0k408_12280_c1
414 nmdc:mga06z11_1301_c1
415 nmdc:mga08y16_16_c1
416 nmdc:mga0n895_412_c1
417 nmdc:mga0rr50_8603_c1
418 nmdc:mga0a205_7322_c1
419 Ga0495601_0006998
420 Ga0495612_0000192
421 Ga0500578_0086858
422 Ga0500643_000001
423 Ga0500643_000741
424 Ga0500643_014612
425 Ga0500646_0020925
426 Ga0500641_0004455
427 Ga0500556_0000031
428 Ga0500594_0003713
429 Ga0500595_003911
430 Ga0500642_0000003
431 Ga0500642_0001252
432 Ga0500642_0073967
433 Ga0500616_0000539
434 Ga0500616_0002671
435 Ga0500645_000673
436 Ga0501084_0007504
437 Ga0501082_0001879
438 Ga0501082_0057797
439 2509149356
440 2585294966
441 2585295664
442 2643951581
443 2830077581
444 2830079187
445 2929200344
446 2935393627
447 2996339560
448 2996341420
449 3000867145
450 3006491872
451 8006926817
452 8055912478

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00732

GMC_oxred_N

GMC oxidoreductase

27

332

0.97

PF05199

GMC_oxred_C

GMC oxidoreductase

429

559

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5oc1-assembly1.cif.gz_A crystal structure of aryl-alcohol oxidase from pleurotus eryngii in complex with p-anisic acid 0.9541 7 533
3t37-assembly1.cif.gz_A crystal structure of pyridoxine 4-oxidase from mesorbium loti 0.9515 7 535
3fim-assembly1.cif.gz_B crystal structure of aryl-alcohol-oxidase from pleurotus eryingii 0.9515 7 533
8bxl-assembly3.cif.gz_E patulin synthase from penicillium expansum 0.9473 1 535
7r36-assembly1.cif.gz_A difference-refined structure of fatty acid photodecarboxylase 2 microsecond following 400-nm laser irradiation of the dark-state determined by sfx 0.946 4 538
ID Description Score Start End Superfamily
af_Q6UPE0_47_576_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9894 9 530 3.50.50.60
af_Q2FV11_9_533_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9795 8 527 3.50.50.60
af_P17444_4_531_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.976 8 530 3.50.50.60
af_Q6UPE0_47_576_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9727 9 530 3.50.50.60
af_Q2FV11_9_533_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9685 8 527 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A0K0ES56-F1-model_v4 Choline dehydrogenase (Glucose-methanol-choline oxidoreductase N-terminal domain-containing protein) 0.9902 8 541 GO:0016614
GO:0050660
AF-A0A6J3B744-F1-model_v4 LOW QUALITY PROTEIN: choline dehydrogenase, mitochondrial 0.9899 154 548 GO:0005743
GO:0008812
GO:0050660
AF-A0A1A8G5R8-F1-model_v4 Choline dehydrogenase 0.9898 192 501 GO:0005743
GO:0008812
GO:0050660
AF-Q64644-F1-model_v4 Choline dehydrogenase (EC 1.1.99.1) 0.9894 117 548 GO:0008812
GO:0050660
AF-M1EJU1-F1-model_v4 Choline dehydrogenase 0.9889 233 547 GO:0005743
GO:0008812
GO:0050660

Map