F338347

General Info

Members Datasets Scaffolds Average Seq Length
225 176 199 469

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2886848708|2886849119
Length 514
Sequence NAVTGTIRATDAADAADAKDISDSPIATPDPKSSNAAPRTLYRKLVDSHTVATLDAQNVLLFCDLHLMNEYTSPQAFTGLREQGRGVPMPGQQVAVVSHIIPTHAVPSALRVIADPPSALQASNLKANCDRHGIRLFDTTDALQGIEHVVAPEHGMIRPGMVVICGDSHTTTYGALGALGFGIGTTEVEHVLATQTLVYRVARDMRIRVDGALPAGTTAKDLVLAIIGRIGAQGARGYVVEFCGTTIDALSVEARFTLCNMAVEAGARGALIAPDATAINYVLARCPDLAGEWREPALARWRTLRSDPGARFDAEHRFDAADIAPQVTWGTSPDQVAPIDGHAPDPARMAVGPARDSAERALRYTRLEAGAALAGTPIQHVFIGSCTNGRIEDLRAAAAVLRGSRVAPGVRAMVVPGSGAVRAMAEAEGLDRVFLDAGFEWRQPGCSMCLAMNDDVLADGIRCASTTNRNFEGRQGRGAITHLMSPAMAAAAAVTGRLTDVRRLPPVLGEESPR

Samples

Sample ID Description Type Environment
1 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
2 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
3 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
4 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
5 2643221609 Acidovorax sp. Root217 Isolate Unclassified
6 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
7 2738543012 Acidovorax sp. CF301 Isolate Unclassified
8 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
9 2816332133 Acidovorax radicis 2721A Isolate Unclassified
10 2831864461 Roseateles noduli HZ7 Isolate Nodule
11 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
12 2855730933 Achromobacter sp. HZ28 Isolate Nodule
13 2855767633 Achromobacter sp. HZ34 Isolate Nodule
14 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
15 2858950400 Achromobacter sp. K91 Isolate Unclassified
16 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
17 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
18 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
19 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
20 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
21 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
22 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
23 2941479691
24 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
25 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
26 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
27 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
28 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
31 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
37 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
38 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
39 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
40 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
41 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
54 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
55 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
56 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
91 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
92 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
93 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
113 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
114 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
115 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
116 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
124 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
132 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
133 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
176 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.44
Metatranscriptomes 0
Isolates 11.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.67
Nodule 4.89
Rhizoplane 2.22
Rhizosphere 51.11
Stem 0
Stem Tuber 0.44
Unclassified 22.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10011110 3300002459 Bacteria 1856
2 JGI25162J39368_1005544 3300002737 Bacteria 2429
3 JGI25151J46595_10000857 3300003187 Bacteria 24191
4 JGI25151J46595_10028050 3300003187 Bacteria 2247
5 rootL2_10001457 3300003322 Bacteria 117785
6 Ga0055526_1002634 3300003771 Bacteria 11990
7 Ga0055524_1000310 3300003775 Bacteria 46341
8 Ga0055524_1021610 3300003775 Bacteria 2126
9 Ga0055534_1000457 3300003784 Bacteria 23650
10 Ga0055531_10004193 3300003794 Bacteria 8890
11 Ga0055531_10016562 3300003794 Bacteria 3171
12 Ga0065165_1000170 3300005262 Bacteria 115389
13 Ga0065165_1000562 3300005262 Bacteria 55318
14 Ga0070683_100054414 3300005329 Bacteria 3711
15 Ga0070670_100006334 3300005331 Bacteria 10017
16 Ga0070677_10007596 3300005333 Bacteria 3625
17 Ga0070682_100072227 3300005337 Bacteria 2211
18 Ga0070675_100125412 3300005354 Bacteria 2184
19 Ga0070709_10006691 3300005434 Bacteria 6293
20 Ga0070713_100001594 3300005436 Bacteria 14532
21 Ga0070711_100004649 3300005439 Bacteria 8126
22 Ga0070681_10052839 3300005458 Bacteria 4052
23 Ga0068853_100001980 3300005539 Bacteria 15101
24 Ga0068855_100028595 3300005563 Bacteria 6669
25 Ga0068855_100164846 3300005563 Bacteria 2513
26 Ga0068857_100167077 3300005577 Bacteria 1999
27 Ga0068856_100012510 3300005614 Bacteria 8216
28 Ga0081455_10004576 3300005937 Bacteria 15448
29 Ga0081540_1021507 3300005983 Bacteria 3837
30 Ga0075364_10002831 3300006051 Bacteria 9764
31 Ga0075364_10019655 3300006051 Bacteria 4240
32 Ga0075364_10033727 3300006051 Bacteria 3298
33 Ga0075366_10015095 3300006195 Bacteria 4419
34 Ga0075366_10027013 3300006195 Bacteria 3366
35 Ga0075366_10062288 3300006195 Bacteria 2217
36 Ga0075370_10044928 3300006353 Bacteria 2497
37 Ga0075429_100004508 3300006880 Bacteria 11984
38 Ga0099823_1000176 3300006944 Bacteria 35142
39 Ga0079104_1000150 3300006946 Bacteria 97808
40 Ga0099826_10000021 3300006948 Bacteria 173580
41 Ga0105251_10022704 3300009011 Bacteria 3251
42 Ga0105240_10000250 3300009093 Bacteria 107111
43 Ga0105237_10092195 3300009545 Bacteria 3020
44 Ga0105238_10041948 3300009551 Bacteria 4634
45 Ga0157319_1000003 3300012497 Bacteria 397199
46 Ga0213872_10002251 3300021361 Bacteria 11524
47 Ga0207427_100551 3300025231 Bacteria 19055
48 Ga0209437_100272 3300025233 Bacteria 77336
49 Ga0209673_1020859 3300025273 Bacteria 2307
50 Ga0209130_1001008 3300025284 Bacteria 21864
51 Ga0209675_1000557 3300025291 Bacteria 27014
52 Ga0209675_1001151 3300025291 Bacteria 16117
53 Ga0209676_1003002 3300025292 Bacteria 10969
54 Ga0209025_1000003 3300025294 Bacteria 1366495
55 Ga0209025_1000371 3300025294 Bacteria 94612
56 Ga0209025_1000447 3300025294 Bacteria 80906
57 Ga0209564_1000003 3300025295 Bacteria 1585848
58 Ga0209050_1002848 3300025298 Bacteria 13718
59 Ga0209050_1008757 3300025298 Bacteria 5324
60 Ga0209256_1000150 3300025299 Bacteria 146086
61 Ga0209256_1000326 3300025299 Bacteria 81240
62 Ga0209256_1000344 3300025299 Bacteria 75635
63 Ga0209051_1000386 3300025303 Bacteria 62211
64 Ga0209051_1007084 3300025303 Bacteria 6199
65 Ga0209051_1013659 3300025303 Bacteria 3847
66 Ga0209257_1000318 3300025304 Bacteria 101186
67 Ga0209257_1000399 3300025304 Bacteria 85231
68 Ga0209257_1017235 3300025304 Bacteria 2860
69 Ga0207682_10005514 3300025893 Bacteria 5154
70 Ga0207707_10046024 3300025912 Bacteria 3800
71 Ga0207695_10000615 3300025913 Bacteria 71501
72 Ga0207671_10019633 3300025914 Bacteria 5164
73 Ga0207663_10008063 3300025916 Bacteria 5488
74 Ga0207657_10017121 3300025919 Bacteria 6965
75 Ga0207681_10120675 3300025923 Bacteria 1922
76 Ga0207694_10020719 3300025924 Bacteria 4978
77 Ga0207700_10034939 3300025928 Bacteria 3615
78 Ga0207664_10212585 3300025929 Bacteria 1674
79 Ga0207691_10044304 3300025940 Bacteria 4096
80 Ga0207667_10095916 3300025949 Bacteria 3061
81 Ga0207639_10009334 3300026041 Bacteria 6765
82 Ga0207702_10027490 3300026078 Bacteria 4724
83 Ga0207702_10075161 3300026078 Bacteria 2918
84 Ga0207674_10046805 3300026116 Bacteria 4439
85 Ga0207698_10001442 3300026142 Bacteria 13816
86 Ga0209281_1000050 3300027111 Bacteria 320102
87 Ga0209389_1022566 3300027296 Bacteria 5572
88 Ga0209282_1000019 3300027666 Bacteria 184034
89 Ga0209974_10005937 3300027876 Bacteria 4279
90 Ga0307517_10144767 3300028786 Bacteria 1653
91 Ga0307515_10005239 3300028794 Bacteria 26356
92 Ga0307515_10006245 3300028794 Bacteria 23915
93 Ga0307515_10006818 3300028794 Bacteria 22718
94 Ga0307515_10134723 3300028794 Bacteria 2694
95 Ga0265327_10002563 3300031251 Bacteria 18838
96 Ga0307513_10040435 3300031456 Bacteria 5156
97 Ga0307509_10012267 3300031507 Bacteria 10274
98 Ga0307408_100049863 3300031548 Bacteria 3008
99 Ga0307508_10000278 3300031616 Bacteria 62985
100 Ga0307514_10001051 3300031649 Bacteria 39603
101 Ga0307514_10003111 3300031649 Bacteria 16325
102 Ga0307514_10043042 3300031649 Bacteria 3548
103 Ga0307412_10000106 3300031911 Bacteria 67067
104 Ga0373933_0027255 3300035724 Bacteria 3289
105 Ga0373947_0007972 3300035725 Bacteria 6108
106 Ga0373937_0052715 3300036401 Bacteria 3731
107 Ga0373925_0036845 3300037068 Bacteria 3609
108 Ga0395899_0000598 3300037312 Bacteria 37911
109 Ga0395899_0013949 3300037312 Bacteria 6137
110 Ga0395899_0030628 3300037312 Bacteria 4045
111 Ga0395900_0165968 3300037418 Bacteria 2250
112 Ga0395898_0221299 3300037466 Bacteria 1805
113 Ga0395905_0000174 3300037471 Bacteria 104301
114 Ga0395905_0009460 3300037471 Bacteria 9520
115 Ga0395905_0009894 3300037471 Bacteria 9293
116 Ga0436361_0453075 3300039447 Bacteria 45859
117 Ga0451849_0487363 3300041505 Bacteria 4898
118 Ga0451853_0541487 3300041512 Bacteria 7715
119 Ga0450911_001085 3300042115 Bacteria 6833
120 Ga0439459_0000524 3300042438 Bacteria 5062
121 Ga0466969_0013333 3300044656 Bacteria 4326
122 Ga0466965_0009210 3300044683 Bacteria 4586
123 Ga0466966_0004556 3300044684 Bacteria 9132
124 Ga0453684_0120529 3300044712 Bacteria 3168
125 Ga0495596_0000064 3300046500 Bacteria 77744
126 Ga0495583_0001067 3300046506 Bacteria 30637
127 Ga0495583_0005837 3300046506 Bacteria 8217
128 Ga0495610_0000545 3300046512 Bacteria 37663
129 Ga0495616_0000974 3300046513 Bacteria 20508
130 Ga0495616_0001545 3300046513 Bacteria 15878
131 Ga0495620_0050249 3300046515 Bacteria 1780
132 Ga0495632_0033371 3300046519 Bacteria 2643
133 Ga0495637_0009838 3300046520 Bacteria 4649
134 Ga0495643_0000259 3300046522 Bacteria 77609
135 Ga0495663_0005745 3300046525 Bacteria 3435
136 Ga0495654_0005131 3300046530 Bacteria 7650
137 Ga0495609_0000244 3300046538 Bacteria 51384
138 Ga0495621_0001901 3300046539 Bacteria 5486
139 Ga0495597_0000083 3300046542 Bacteria 83574
140 Ga0495656_0004103 3300046615 Bacteria 4962
141 Ga0495625_0000337 3300046660 Bacteria 71532
142 Ga0495625_0012981 3300046660 Bacteria 6721
143 Ga0495661_0033984 3300046665 Bacteria 3212
144 Ga0495670_0013272 3300046691 Bacteria 4052
145 Ga0495671_0003940 3300046692 Bacteria 9003
146 Ga0495649_0001856 3300046694 Bacteria 15480
147 Ga0495636_0003556 3300047318 Bacteria 6040
148 Ga0495687_020476 3300047443 Bacteria 3221
149 Ga0495687_020477 3300047443 Bacteria 3221
150 Ga0495684_0051210 3300047471 Bacteria 3152
151 Ga0495626_0001196 3300048091 Bacteria 21538
152 Ga0496110_0170639 3300048913 Bacteria 1974
153 Ga0496114_0004013 3300048917 Bacteria 11374
154 Ga0496116_0000661 3300048919 Bacteria 44909
155 Ga0496116_0023049 3300048919 Bacteria 4646
156 Ga0496117_0023160 3300048920 Bacteria 4959
157 Ga0496118_0021313 3300048921 Bacteria 5709
158 Ga0496118_0022188 3300048921 Bacteria 5561
159 Ga0496119_0012894 3300048922 Bacteria 6733
160 Ga0496120_0003516 3300048923 Bacteria 14198
161 Ga0496121_0000165 3300048924 Bacteria 145052
162 Ga0496121_0010069 3300048924 Bacteria 10730
163 Ga0496121_0012566 3300048924 Bacteria 9210
164 Ga0496121_0030833 3300048924 Bacteria 4916
165 Ga0496122_0000408 3300048925 Bacteria 91323
166 Ga0496122_0002323 3300048925 Bacteria 27448
167 Ga0496122_0073864 3300048925 Bacteria 2415
168 Ga0496123_0000188 3300048926 Bacteria 125135
169 Ga0496123_0010511 3300048926 Bacteria 8164
170 Ga0496124_0010449 3300048927 Bacteria 9396
171 Ga0496124_0032654 3300048927 Bacteria 4592
172 Ga0496125_0000121 3300048928 Bacteria 174971
173 Ga0496125_0000939 3300048928 Bacteria 45810
174 Ga0496125_0015215 3300048928 Bacteria 7450
175 Ga0496125_0028457 3300048928 Bacteria 5047
176 Ga0496125_0029924 3300048928 Bacteria 4882
177 Ga0496126_0079794 3300048929 Bacteria 2897
178 Ga0501034_0000447 3300049571 Bacteria 68166
179 Ga0501041_0026723 3300049577 Bacteria 3474
180 Ga0501042_0190737 3300049578 Bacteria 1478
181 Ga0501043_0003259 3300049579 Bacteria 13379
182 Ga0501046_0042087 3300049580 Bacteria 3642
183 Ga0501047_0001261 3300049581 Bacteria 25055
184 Ga0501074_0094159 3300049590 Bacteria 2145
185 Ga0501249_000099 3300049679 Bacteria 27431
186 Ga0501079_0149248 3300049741 Bacteria 1822
187 Ga0501081_0235758 3300049743 Bacteria 1333
188 Ga0501035_0002321 3300049822 Bacteria 18753
189 Ga0501035_0135977 3300049822 Bacteria 2140
190 Ga0501044_0068893 3300049823 Bacteria 3603
191 Ga0501045_0008154 3300049824 Bacteria 7297
192 nmdc:mga0k408_5063_c1 3300050493 Bacteria 6982
193 nmdc:mga09592_1310_c1 3300050508 Bacteria 19982
194 nmdc:mga0qj67_196171_c1 3300050509 Bacteria 1641
195 Ga0500562_003901 3300053108 Bacteria 3760
196 Ga0501084_0255441 3300054114 Bacteria 1479
197 Ga0501084_0308981 3300054114 Bacteria 1335
198 Ga0501082_0001444 3300060353 Bacteria 20878
199 Ga0501082_0074691 3300060353 Bacteria 2920

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300054114 Ga0501084_0308981 Ga0501084_0308981_158_1309 380
2 3300060353 Ga0501082_0074691 Ga0501082_0074691_1737_2888 380
3 3300003794 Ga0055531_10016562 Ga0055531_100165621 396
4 3300049741 Ga0501079_0149248 Ga0501079_0149248_32_1282 403
5 3300054114 Ga0501084_0255441 Ga0501084_0255441_32_1282 403
6 3300035725 Ga0373947_0007972 Ga0373947_0007972_871_2109 408
7 3300049743 Ga0501081_0235758 Ga0501081_0235758_38_1291 409
8 3300046515 Ga0495620_0050249 Ga0495620_0050249_10_1266 411
9 3300003322 rootL2_10001457 rootL2_1000145748 429
10 3300042438 Ga0439459_0000524 Ga0439459_0000524_2867_4432 429
11 3300003775 Ga0055524_1000310 Ga0055524_100031033 430
12 3300012497 Ga0157319_1000003 Ga0157319_100000379 430
13 3300025299 Ga0209256_1000150 Ga0209256_100015034 430
14 3300025304 Ga0209257_1000318 Ga0209257_100031861 430
15 3300031548 Ga0307408_100049863 Ga0307408_1000498632 430
16 3300048913 Ga0496110_0170639 Ga0496110_0170639_642_1952 431
17 3300049578 Ga0501042_0190737 Ga0501042_0190737_125_1462 432
18 3300006880 Ga0075429_100004508 Ga0075429_10000450812 436
19 3300050508 nmdc:mga09592_1310_c1 nmdc:mga09592_1310_c1_17557_18993 436
20 3300050509 nmdc:mga0qj67_196171_c1 nmdc:mga0qj67_196171_c1_58_1494 436
21 3300048924 Ga0496121_0012566 Ga0496121_0012566_5749_7170 442
22 3300048928 Ga0496125_0015215 Ga0496125_0015215_1638_3050 442
23 3300042115 Ga0450911_001085 Ga0450911_001085_1189_2610 444
24 3300048929 Ga0496126_0079794 Ga0496126_0079794_990_2402 446
25 3300025929 Ga0207664_10212585 Ga0207664_102125851 448
26 3300005262 Ga0065165_1000562 Ga0065165_100056245 451
27 3300006195 Ga0075366_10027013 Ga0075366_100270134 451
28 iso_pu_bacteria 2643221603 2644029192 452
29 3300005329 Ga0070683_100054414 Ga0070683_1000544144 453
30 3300009551 Ga0105238_10041948 Ga0105238_100419482 453
31 iso_pu_bacteria 2884811622 2884816094 453
32 iso_pu_bacteria 2884836552 2884839427 453
33 iso_pu_bacteria 2884852848 2884856763 453
34 iso_pu_bacteria 2896154374 2896158109 453
35 3300025294 Ga0209025_1000371 Ga0209025_100037151 454
36 3300025303 Ga0209051_1007084 Ga0209051_10070847 454
37 3300047318 Ga0495636_0003556 Ga0495636_0003556_308_1750 454
38 3300049571 Ga0501034_0000447 Ga0501034_0000447_27188_28606 454
39 3300026078 Ga0207702_10075161 Ga0207702_100751612 455
40 3300027876 Ga0209974_10005937 Ga0209974_100059373 455
41 3300037312 Ga0395899_0000598 Ga0395899_0000598_17974_19461 455
42 3300044684 Ga0466966_0004556 Ga0466966_0004556_3059_4510 455
43 iso_pu_bacteria 2739367756 2739791879 455
44 3300002737 JGI25162J39368_1005544 JGI25162J39368_10055441 456
45 3300005331 Ga0070670_100006334 Ga0070670_1000063348 456
46 3300005563 Ga0068855_100028595 Ga0068855_1000285956 456
47 3300009093 Ga0105240_10000250 Ga0105240_1000025076 456
48 3300025233 Ga0209437_100272 Ga0209437_10027231 456
49 3300025913 Ga0207695_10000615 Ga0207695_1000061515 456
50 3300025924 Ga0207694_10020719 Ga0207694_100207192 456
51 3300026142 Ga0207698_10001442 Ga0207698_100014427 456
52 3300041505 Ga0451849_0487363 Ga0451849_0487363_2761_4173 456
53 3300041512 Ga0451853_0541487 Ga0451853_0541487_3657_5069 456
54 3300046506 Ga0495583_0001067 Ga0495583_0001067_23125_24525 456
55 3300046506 Ga0495583_0005837 Ga0495583_0005837_6227_7627 456
56 3300046513 Ga0495616_0000974 Ga0495616_0000974_9815_11215 456
57 3300046520 Ga0495637_0009838 Ga0495637_0009838_1281_2681 456
58 3300046522 Ga0495643_0000259 Ga0495643_0000259_72702_74102 456
59 3300046660 Ga0495625_0000337 Ga0495625_0000337_52448_53857 456
60 3300046665 Ga0495661_0033984 Ga0495661_0033984_234_1634 456
61 3300046691 Ga0495670_0013272 Ga0495670_0013272_425_1825 456
62 3300048091 Ga0495626_0001196 Ga0495626_0001196_10870_12270 456
63 3300048925 Ga0496122_0000408 Ga0496122_0000408_50975_52390 456
64 3300048926 Ga0496123_0000188 Ga0496123_0000188_38934_40349 456
65 3300048928 Ga0496125_0000939 Ga0496125_0000939_40483_41898 456
66 3300037471 Ga0395905_0000174 Ga0395905_0000174_54933_56345 457
67 3300044656 Ga0466969_0013333 Ga0466969_0013333_2662_4092 457
68 3300049822 Ga0501035_0002321 Ga0501035_0002321_155_1567 457
69 3300025298 Ga0209050_1008757 Ga0209050_10087575 459
70 3300044683 Ga0466965_0009210 Ga0466965_0009210_2936_4342 459
71 3300048917 Ga0496114_0004013 Ga0496114_0004013_2392_3801 459
72 3300049577 Ga0501041_0026723 Ga0501041_0026723_809_2242 459
73 3300049580 Ga0501046_0042087 Ga0501046_0042087_82_1515 459
74 3300049590 Ga0501074_0094159 Ga0501074_0094159_310_1743 459
75 3300049824 Ga0501045_0008154 Ga0501045_0008154_4588_6021 459
76 iso_pu_bacteria 2513237150 2513952461 460
77 iso_pu_bacteria 2599185292 2599904317 460
78 iso_pu_bacteria 2671180115 2671585960 460
79 iso_pu_bacteria 2834641062 2834643549 460
80 iso_pu_bacteria 2855730933 2855734116 460
81 iso_pu_bacteria 2855767633 2855769706 460
82 iso_pu_bacteria 2857542790 2857546129 460
83 iso_pu_bacteria 2858950400 2858954262 460
84 iso_pu_bacteria 2881412998 2881414045 460
85 iso_pu_bacteria 2941479691 2941484211 460
86 iso_pu_bacteria 8003400568 8003405287 460
87 iso_pu_bacteria 8055225921 8055227189 460
88 3300049679 Ga0501249_000099 Ga0501249_000099_2829_4244 461
89 iso_pu_bacteria 2537561728 2538425579 461
90 iso_pu_bacteria 2871282230 2871285982 461
91 iso_pu_bacteria 2990710928 2990712896 461
92 3300003784 Ga0055534_1000457 Ga0055534_100045713 462
93 3300025231 Ga0207427_100551 Ga0207427_1005517 462
94 3300025284 Ga0209130_1001008 Ga0209130_10010083 462
95 3300025291 Ga0209675_1000557 Ga0209675_10005578 462
96 3300025292 Ga0209676_1003002 Ga0209676_10030026 462
97 3300025304 Ga0209257_1017235 Ga0209257_10172352 462
98 3300028794 Ga0307515_10005239 Ga0307515_1000523913 462
99 3300031649 Ga0307514_10003111 Ga0307514_1000311113 462
100 3300048928 Ga0496125_0028457 Ga0496125_0028457_1134_2546 462
101 iso_pu_bacteria 2643221609 2644063171 462
102 3300003187 JGI25151J46595_10000857 JGI25151J46595_100008579 463
103 3300003187 JGI25151J46595_10028050 JGI25151J46595_100280502 463
104 3300003771 Ga0055526_1002634 Ga0055526_10026347 463
105 3300003775 Ga0055524_1021610 Ga0055524_10216102 463
106 3300003794 Ga0055531_10004193 Ga0055531_100041935 463
107 3300005262 Ga0065165_1000170 Ga0065165_1000170110 463
108 3300005333 Ga0070677_10007596 Ga0070677_100075961 463
109 3300005337 Ga0070682_100072227 Ga0070682_1000722271 463
110 3300005354 Ga0070675_100125412 Ga0070675_1001254122 463
111 3300005458 Ga0070681_10052839 Ga0070681_100528393 463
112 3300005539 Ga0068853_100001980 Ga0068853_1000019806 463
113 3300005563 Ga0068855_100164846 Ga0068855_1001648461 463
114 3300005577 Ga0068857_100167077 Ga0068857_1001670771 463
115 3300006051 Ga0075364_10002831 Ga0075364_100028313 463
116 3300006051 Ga0075364_10019655 Ga0075364_100196553 463
117 3300006051 Ga0075364_10033727 Ga0075364_100337272 463
118 3300006195 Ga0075366_10015095 Ga0075366_100150954 463
119 3300006195 Ga0075366_10062288 Ga0075366_100622882 463
120 3300006353 Ga0075370_10044928 Ga0075370_100449282 463
121 3300006944 Ga0099823_1000176 Ga0099823_100017625 463
122 3300006946 Ga0079104_1000150 Ga0079104_100015030 463
123 3300006948 Ga0099826_10000021 Ga0099826_10000021143 463
124 3300009545 Ga0105237_10092195 Ga0105237_100921953 463
125 3300025273 Ga0209673_1020859 Ga0209673_10208592 463
126 3300025291 Ga0209675_1001151 Ga0209675_10011513 463
127 3300025294 Ga0209025_1000003 Ga0209025_1000003888 463
128 3300025294 Ga0209025_1000447 Ga0209025_100044741 463
129 3300025295 Ga0209564_1000003 Ga0209564_100000360 463
130 3300025298 Ga0209050_1002848 Ga0209050_10028487 463
131 3300025299 Ga0209256_1000326 Ga0209256_100032637 463
132 3300025299 Ga0209256_1000344 Ga0209256_100034455 463
133 3300025303 Ga0209051_1000386 Ga0209051_100038626 463
134 3300025303 Ga0209051_1013659 Ga0209051_10136592 463
135 3300025304 Ga0209257_1000399 Ga0209257_100039918 463
136 3300025893 Ga0207682_10005514 Ga0207682_100055144 463
137 3300025912 Ga0207707_10046024 Ga0207707_100460243 463
138 3300025914 Ga0207671_10019633 Ga0207671_100196332 463
139 3300025923 Ga0207681_10120675 Ga0207681_101206751 463
140 3300025940 Ga0207691_10044304 Ga0207691_100443042 463
141 3300025949 Ga0207667_10095916 Ga0207667_100959163 463
142 3300026041 Ga0207639_10009334 Ga0207639_100093344 463
143 3300026116 Ga0207674_10046805 Ga0207674_100468052 463
144 3300027111 Ga0209281_1000050 Ga0209281_1000050203 463
145 3300027296 Ga0209389_1022566 Ga0209389_10225662 463
146 3300027666 Ga0209282_1000019 Ga0209282_1000019141 463
147 3300028786 Ga0307517_10144767 Ga0307517_101447672 463
148 3300028794 Ga0307515_10006245 Ga0307515_1000624510 463
149 3300028794 Ga0307515_10006818 Ga0307515_1000681810 463
150 3300028794 Ga0307515_10134723 Ga0307515_101347233 463
151 3300031456 Ga0307513_10040435 Ga0307513_100404352 463
152 3300031507 Ga0307509_10012267 Ga0307509_100122677 463
153 3300031616 Ga0307508_10000278 Ga0307508_1000027834 463
154 3300031649 Ga0307514_10043042 Ga0307514_100430422 463
155 3300031911 Ga0307412_10000106 Ga0307412_1000010634 463
156 3300035724 Ga0373933_0027255 Ga0373933_0027255_718_2121 463
157 3300036401 Ga0373937_0052715 Ga0373937_0052715_647_2050 463
158 3300037068 Ga0373925_0036845 Ga0373925_0036845_819_2222 463
159 3300037312 Ga0395899_0013949 Ga0395899_0013949_308_1726 463
160 3300037312 Ga0395899_0030628 Ga0395899_0030628_218_1636 463
161 3300037418 Ga0395900_0165968 Ga0395900_0165968_133_1593 463
162 3300037466 Ga0395898_0221299 Ga0395898_0221299_227_1645 463
163 3300037471 Ga0395905_0009460 Ga0395905_0009460_1824_3242 463
164 3300037471 Ga0395905_0009894 Ga0395905_0009894_4887_6302 463
165 3300046500 Ga0495596_0000064 Ga0495596_0000064_12849_14291 463
166 3300046512 Ga0495610_0000545 Ga0495610_0000545_21086_22528 463
167 3300046513 Ga0495616_0001545 Ga0495616_0001545_7198_8640 463
168 3300046519 Ga0495632_0033371 Ga0495632_0033371_406_1821 463
169 3300046525 Ga0495663_0005745 Ga0495663_0005745_1256_2683 463
170 3300046530 Ga0495654_0005131 Ga0495654_0005131_6009_7427 463
171 3300046538 Ga0495609_0000244 Ga0495609_0000244_46776_48218 463
172 3300046539 Ga0495621_0001901 Ga0495621_0001901_2300_3715 463
173 3300046542 Ga0495597_0000083 Ga0495597_0000083_16068_17489 463
174 3300046615 Ga0495656_0004103 Ga0495656_0004103_2299_3726 463
175 3300046660 Ga0495625_0012981 Ga0495625_0012981_1135_2550 463
176 3300046692 Ga0495671_0003940 Ga0495671_0003940_3518_4960 463
177 3300046694 Ga0495649_0001856 Ga0495649_0001856_1667_3082 463
178 3300047443 Ga0495687_020476 Ga0495687_020476_32_1447 463
179 3300047443 Ga0495687_020477 Ga0495687_020477_32_1447 463
180 3300047471 Ga0495684_0051210 Ga0495684_0051210_921_2324 463
181 3300048919 Ga0496116_0000661 Ga0496116_0000661_7848_9290 463
182 3300048919 Ga0496116_0023049 Ga0496116_0023049_3168_4610 463
183 3300048920 Ga0496117_0023160 Ga0496117_0023160_1611_3032 463
184 3300048921 Ga0496118_0021313 Ga0496118_0021313_629_2050 463
185 3300048921 Ga0496118_0022188 Ga0496118_0022188_2595_4016 463
186 3300048922 Ga0496119_0012894 Ga0496119_0012894_602_2023 463
187 3300048923 Ga0496120_0003516 Ga0496120_0003516_8562_9983 463
188 3300048924 Ga0496121_0000165 Ga0496121_0000165_124643_126064 463
189 3300048924 Ga0496121_0010069 Ga0496121_0010069_8739_10157 463
190 3300048924 Ga0496121_0030833 Ga0496121_0030833_288_1730 463
191 3300048925 Ga0496122_0002323 Ga0496122_0002323_4057_5499 463
192 3300048925 Ga0496122_0073864 Ga0496122_0073864_524_1945 463
193 3300048926 Ga0496123_0010511 Ga0496123_0010511_3335_4777 463
194 3300048927 Ga0496124_0010449 Ga0496124_0010449_5054_6577 463
195 3300048927 Ga0496124_0032654 Ga0496124_0032654_819_2240 463
196 3300048928 Ga0496125_0000121 Ga0496125_0000121_135110_136531 463
197 3300048928 Ga0496125_0029924 Ga0496125_0029924_2727_4148 463
198 3300049579 Ga0501043_0003259 Ga0501043_0003259_9433_10875 463
199 3300049581 Ga0501047_0001261 Ga0501047_0001261_12426_13868 463
200 3300049822 Ga0501035_0135977 Ga0501035_0135977_177_1619 463
201 3300049823 Ga0501044_0068893 Ga0501044_0068893_870_2312 463
202 3300050493 nmdc:mga0k408_5063_c1 nmdc:mga0k408_5063_c1_5021_6436 463
203 3300053108 Ga0500562_003901 Ga0500562_003901_1426_2841 463
204 3300060353 Ga0501082_0001444 Ga0501082_0001444_1908_3323 463
205 iso_pu_bacteria 2738543012 2739246295 463
206 iso_pu_bacteria 2816332133 2816475541 463
207 iso_pu_bacteria 2831864461 2831865098 463
208 iso_pu_bacteria 2886848708 2886849119 463
209 3300005937 Ga0081455_10004576 Ga0081455_100045763 464
210 3300021361 Ga0213872_10002251 Ga0213872_1000225113 464
211 3300031251 Ga0265327_10002563 Ga0265327_1000256311 464
212 3300031649 Ga0307514_10001051 Ga0307514_100010516 464
213 3300039447 Ga0436361_0453075 Ga0436361_0453075_16979_18394 464
214 3300044712 Ga0453684_0120529 Ga0453684_0120529_30_1439 464
215 3300002459 JGI24751J29686_10011110 JGI24751J29686_100111102 465
216 3300005434 Ga0070709_10006691 Ga0070709_100066913 465
217 3300005436 Ga0070713_100001594 Ga0070713_10000159410 465
218 3300005439 Ga0070711_100004649 Ga0070711_1000046495 465
219 3300005614 Ga0068856_100012510 Ga0068856_1000125102 465
220 3300005983 Ga0081540_1021507 Ga0081540_10215072 465
221 3300009011 Ga0105251_10022704 Ga0105251_100227042 465
222 3300025916 Ga0207663_10008063 Ga0207663_100080635 465
223 3300025919 Ga0207657_10017121 Ga0207657_100171217 465
224 3300025928 Ga0207700_10034939 Ga0207700_100349393 465
225 3300026078 Ga0207702_10027490 Ga0207702_100274902 465

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00330

Aconitase

Aconitase family (aconitate hydratase)

43

496

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9292 4 458
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9206 4 458
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.8833 4 463
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.8772 4 463
4nqy-assembly1.cif.gz_A the reduced form of mj0499 0.8664 4 462
ID Description Score Start End Superfamily
af_O14289_10_298_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9867 4 284 3.30.499.10
af_P07264_338_508_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9784 323 458 3.30.499.10
af_P0A6A6_327_466_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9776 326 462 3.30.499.10
af_O14289_312_505_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9758 299 462 3.30.499.10
4kp2B02 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9701 332 458 3.30.499.10
ID Description Score Start End GO Terms
AF-A0A6A8MP59-F1-model_v4 deleted 0.9968 1 393
AF-A0A355QJY8-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9966 37 354 GO:0003861
GO:0009098
GO:0046872
GO:0047456
GO:0051539
AF-A0A2U1EQJ0-F1-model_v4 deleted 0.9944 1 463
AF-A0A2D9H0R4-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9944 1 238 GO:0003861
GO:0009098
GO:0016853
GO:0046872
GO:0051539
AF-A0A349LP43-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9944 23 237 GO:0003861
GO:0009098
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
94.44 0.94 High
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Predicted Structure (AlphaFold2)

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