F337986

General Info

Members Datasets Scaffolds Average Seq Length
225 171 219 476

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0107536|Ga0373937_0107536_916_2472
Length 518
Sequence MACGSSIGPPKASDCQYGPTARRFDPEIDHGRLIGESNMIQEFIRLTATEAVSRLRQRELSPLDLIDAAAARIAEVEPAVNALPTLCVDRAREHAKRLMNGQNREAETEAGWLAGLPVAIKDLTDVAGVRTTYGSPIFRDHVPAKSHPVVERIERKGGIVIAKSNTPEFGAGGSTFNEVFGRTRNPWNTSLTCGGSTGGGAVALATGEVWLAHGTDHGGSLRRPATYCSVVGLRPSPGRVTRGTSNNLWSPLSVQGPMARNIPDLALFLDAMGGLCPRDPLTFDAPAESFVQAVAEATPPRRIAYTPDYGGRLQVDRETRDICERAVRRFGELGCVVEEFAPDLGGIEEAFMVLRSQHFVVDRELQLQTHRDLIKPDIIWNTENGLAQTPSRLAWADRERAAFFRRFAEMFETYDIFVSPSAATPAFDVNLRFPEFVDGKKLTDYMGASTLNAAVTMTSCPAVAVPCGFDRFGRPVGLQVTAPIRQEARALAAAALFEQLAGLDRLLPIDPREGTVPS

Samples

Sample ID Description Type Environment
1 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
2 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
3 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
4 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
5 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
6 3300003503 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
84 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
88 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
99 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
100 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
111 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
161 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
162 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
163 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
164 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.89
Metatranscriptomes 0.44
Isolates 2.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.22
Nodule 0
Rhizoplane 1.78
Rhizosphere 82.22
Stem 0
Stem Tuber 0
Unclassified 5.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI26141J51220_1000137 3300003503 Bacteria 3614
2 Ga0070676_10057769 3300005328 Bacteria 2297
3 Ga0070680_100003898 3300005336 Bacteria 11155
4 Ga0070691_10012027 3300005341 Bacteria 3963
5 Ga0070669_100029018 3300005353 Bacteria 3987
6 Ga0070671_100055928 3300005355 Bacteria 3283
7 Ga0070694_100022899 3300005444 Bacteria 4010
8 Ga0070678_100086031 3300005456 Bacteria 2397
9 Ga0070706_100015965 3300005467 Bacteria 6935
10 Ga0070698_100008378 3300005471 Bacteria 11174
11 Ga0070695_100001304 3300005545 Bacteria 13773
12 Ga0070695_100019681 3300005545 Bacteria 4113
13 Ga0070665_100018082 3300005548 Bacteria 7075
14 Ga0068855_100028812 3300005563 Bacteria 6644
15 Ga0068855_100046360 3300005563 Bacteria 5139
16 Ga0068857_100137578 3300005577 Bacteria 2206
17 Ga0068856_100010309 3300005614 Bacteria 9083
18 Ga0068860_100180706 3300005843 Unclassified 2039
19 Ga0068862_100006836 3300005844 Bacteria 9457
20 Ga0081455_10000636 3300005937 Bacteria 45482
21 Ga0081455_10049653 3300005937 Bacteria 3615
22 Ga0081540_1027199 3300005983 Bacteria 3246
23 Ga0081539_10002734 3300005985 Bacteria 23839
24 Ga0070712_100005623 3300006175 Bacteria 7756
25 Ga0075367_10052999 3300006178 Bacteria 2403
26 Ga0075369_10004129 3300006186 Bacteria 5344
27 Ga0075369_10008403 3300006186 Bacteria 3969
28 Ga0075366_10032875 3300006195 Bacteria 3055
29 Ga0075428_100000581 3300006844 Bacteria 37409
30 Ga0075428_100024570 3300006844 Bacteria 6668
31 Ga0075430_100023053 3300006846 Bacteria 5295
32 Ga0075431_100002805 3300006847 Bacteria 16882
33 Ga0075431_100006517 3300006847 Bacteria 11591
34 Ga0075431_100009150 3300006847 Bacteria 9933
35 Ga0075431_100039275 3300006847 Bacteria 4876
36 Ga0075433_10004860 3300006852 Bacteria 10513
37 Ga0075434_100003058 3300006871 Bacteria 14892
38 Ga0075434_100013216 3300006871 Bacteria 7847
39 Ga0075429_100011647 3300006880 Bacteria 7627
40 Ga0075429_100020691 3300006880 Bacteria 5711
41 Ga0075436_100003701 3300006914 Bacteria 10476
42 Ga0075436_100101693 3300006914 Bacteria 2002
43 Ga0075435_100006505 3300007076 Bacteria 8267
44 Ga0075435_100139479 3300007076 Bacteria 2033
45 Ga0099794_10018254 3300007265 Bacteria 3143
46 Ga0099794_10020240 3300007265 Bacteria 3009
47 Ga0105240_10007344 3300009093 Bacteria 16032
48 Ga0105240_10046348 3300009093 Bacteria 5509
49 Ga0111539_10004738 3300009094 Bacteria 17770
50 Ga0111539_10007241 3300009094 Bacteria 14214
51 Ga0114129_10006588 3300009147 Bacteria 16489
52 Ga0114129_10028063 3300009147 Bacteria 7973
53 Ga0114129_10052192 3300009147 Bacteria 5738
54 Ga0114129_10099984 3300009147 Bacteria 4013
55 Ga0157374_10073456 3300013296 Bacteria 3228
56 Ga0163162_10011610 3300013306 Bacteria 8589
57 Ga0157372_10120150 3300013307 Bacteria 3017
58 Ga0163163_10091846 3300014325 Bacteria 3050
59 Ga0206353_11597751 3300020082 Bacteria 1856
60 Ga0213876_10006742 3300021384 Bacteria 6270
61 Ga0213876_10019782 3300021384 Bacteria 3556
62 Ga0209148_1000484 3300025254 Bacteria 41477
63 Ga0209455_1001745 3300025272 Bacteria 9235
64 Ga0209675_1002047 3300025291 Bacteria 10769
65 Ga0209758_1022155 3300025297 Bacteria 2929
66 Ga0209257_1000477 3300025304 Bacteria 72873
67 Ga0207684_10004205 3300025910 Bacteria 13668
68 Ga0207707_10086619 3300025912 Bacteria 2737
69 Ga0207695_10113517 3300025913 Bacteria 2685
70 Ga0207695_10117723 3300025913 Bacteria 2629
71 Ga0207693_10049038 3300025915 Unclassified 3316
72 Ga0207693_10103383 3300025915 Bacteria 2234
73 Ga0207663_10112224 3300025916 Unclassified 1851
74 Ga0207660_10010263 3300025917 Bacteria 6072
75 Ga0207652_10025858 3300025921 Bacteria 4884
76 Ga0207681_10086405 3300025923 Bacteria 2228
77 Ga0207706_10039110 3300025933 Bacteria 4206
78 Ga0207667_10022256 3300025949 Bacteria 7006
79 Ga0207667_10075366 3300025949 Bacteria 3503
80 Ga0207639_10156468 3300026041 Bacteria 1915
81 Ga0207702_10032596 3300026078 Bacteria 4348
82 Ga0207674_10066081 3300026116 Bacteria 3644
83 Ga0207674_10120346 3300026116 Bacteria 2593
84 Ga0207698_10026461 3300026142 Bacteria 4104
85 Ga0209996_1000979 3300027395 Bacteria 3396
86 Ga0209995_1000412 3300027471 Bacteria 6646
87 Ga0209999_1001833 3300027543 Bacteria 3694
88 Ga0210002_1001382 3300027617 Bacteria 3400
89 Ga0209983_1000242 3300027665 Bacteria 11097
90 Ga0209983_1012991 3300027665 Bacteria 1711
91 Ga0209971_1000034 3300027682 Bacteria 47898
92 Ga0209966_1000109 3300027695 Bacteria 36391
93 Ga0209998_10000010 3300027717 Bacteria 98452
94 Ga0209974_10001764 3300027876 Bacteria 7885
95 Ga0207428_10000326 3300027907 Bacteria 61788
96 Ga0207428_10010533 3300027907 Bacteria 8255
97 Ga0268266_10004492 3300028379 Bacteria 13339
98 Ga0268265_10003860 3300028380 Bacteria 10582
99 Ga0265324_10015642 3300029957 Bacteria 2787
100 Ga0307513_10024227 3300031456 Bacteria 7066
101 Ga0265314_10100324 3300031711 Bacteria 1862
102 Ga0373923_0022248 3300035111 Bacteria 2484
103 Ga0373939_0007897 3300035114 Bacteria 2595
104 Ga0373941_0006702 3300035115 Bacteria 2785
105 Ga0373943_0049766 3300035170 Bacteria 2058
106 Ga0373955_0027647 3300035172 Bacteria 2935
107 Ga0373962_0014693 3300035242 Bacteria 1998
108 Ga0373924_0015606 3300035410 Bacteria 2890
109 Ga0373931_0036042 3300035691 Bacteria 2576
110 Ga0373931_0049510 3300035691 Bacteria 2232
111 Ga0373935_0065555 3300035692 Bacteria 2331
112 Ga0373927_0085614 3300035695 Bacteria 2046
113 Ga0373947_0077903 3300035725 Bacteria 2045
114 Ga0373937_0002892 3300036401 Bacteria 14337
115 Ga0373937_0107536 3300036401 Bacteria 2593
116 Ga0395899_0006549 3300037312 Bacteria 9027
117 Ga0395900_0005778 3300037418 Bacteria 12927
118 Ga0395900_0006279 3300037418 Bacteria 12400
119 Ga0395900_0019809 3300037418 Bacteria 6856
120 Ga0395898_0007556 3300037466 Bacteria 11542
121 Ga0395898_0031658 3300037466 Bacteria 5283
122 Ga0395901_0001404 3300038443 Bacteria 25152
123 Ga0395901_0006779 3300038443 Bacteria 11568
124 Ga0395901_0111287 3300038443 Bacteria 2875
125 Ga0400484_39121 3300038725 Bacteria 11215
126 Ga0400483_080062 3300039062 Bacteria 19906
127 Ga0400483_226652 3300039062 Bacteria 15992
128 Ga0400489_34432 3300039093 Bacteria 25457
129 Ga0436365_0437771 3300039437 Bacteria 5648
130 Ga0436360_1045723 3300039438 Bacteria 6218
131 Ga0436361_0011544 3300039447 Bacteria 6092
132 Ga0439464_0020397 3300042439 Bacteria 1815
133 Ga0451576_0096373 3300045051 Bacteria 3077
134 Ga0466967_0054557 3300045976 Bacteria 3518
135 Ga0466967_0078806 3300045976 Bacteria 2968
136 Ga0495629_0056500 3300046459 Bacteria 2744
137 Ga0495580_0004048 3300046472 Bacteria 12367
138 Ga0495664_0013572 3300046477 Bacteria 4621
139 Ga0495628_0053831 3300046516 Bacteria 3174
140 Ga0495587_0030374 3300046536 Bacteria 3277
141 Ga0495645_0015239 3300046543 Bacteria 5467
142 Ga0495667_0037124 3300046559 Bacteria 3248
143 Ga0495625_0072401 3300046660 Bacteria 2417
144 Ga0495657_0023646 3300046675 Bacteria 4388
145 Ga0495599_0023601 3300046678 Bacteria 3846
146 Ga0495623_0044484 3300046679 Bacteria 2821
147 Ga0495604_0011210 3300047317 Bacteria 7117
148 Ga0495674_0011596 3300047319 Bacteria 8314
149 Ga0495675_0025995 3300047444 Bacteria 3731
150 Ga0495684_0029800 3300047471 Bacteria 4188
151 Ga0495686_0047301 3300047472 Bacteria 2717
152 Ga0495602_0005915 3300048088 Bacteria 12843
153 Ga0496104_0033293 3300048907 Bacteria 4800
154 Ga0496110_0037958 3300048913 Bacteria 4189
155 Ga0496112_0121943 3300048915 Bacteria 2577
156 Ga0496114_0052336 3300048917 Bacteria 3402
157 Ga0496119_0016568 3300048922 Bacteria 5599
158 Ga0496122_0022415 3300048925 Bacteria 5615
159 Ga0496123_0024852 3300048926 Bacteria 4536
160 Ga0501031_0015945 3300049568 Bacteria 4878
161 Ga0501032_0004971 3300049569 Bacteria 9941
162 Ga0501034_0001155 3300049571 Bacteria 36610
163 Ga0501034_0001184 3300049571 Bacteria 36033
164 Ga0501034_0022966 3300049571 Bacteria 6356
165 Ga0501034_0112272 3300049571 Bacteria 2716
166 Ga0501036_0018083 3300049572 Bacteria 5900
167 Ga0501037_0074879 3300049573 Bacteria 2459
168 Ga0501038_0006203 3300049574 Bacteria 11058
169 Ga0501042_0083631 3300049578 Bacteria 2288
170 Ga0501046_0001388 3300049580 Bacteria 23321
171 Ga0501048_0100801 3300049582 Bacteria 2037
172 Ga0501070_0022958 3300049586 Bacteria 5222
173 Ga0501073_0004259 3300049589 Bacteria 10723
174 Ga0501079_0044388 3300049741 Bacteria 3430
175 Ga0501080_0125279 3300049742 Bacteria 2379
176 Ga0501083_0003049 3300049744 Bacteria 11646
177 Ga0501083_0004171 3300049744 Bacteria 10174
178 Ga0501035_0004889 3300049822 Bacteria 12713
179 Ga0501044_0082585 3300049823 Bacteria 3251
180 Ga0501044_0115682 3300049823 Bacteria 2687
181 Ga0501044_0160759 3300049823 Bacteria 2223
182 nmdc:mga0yw44_2070_c1 3300050492 Bacteria 8375
183 nmdc:mga0yw44_70445_c1 3300050492 Bacteria 2168
184 nmdc:mga0k408_52432_c1 3300050493 Bacteria 2364
185 nmdc:mga05p37_10325_c1 3300050507 Bacteria 11091
186 nmdc:mga05p37_174728_c1 3300050507 Bacteria 2618
187 nmdc:mga05p37_500_c1 3300050507 Bacteria 43103
188 nmdc:mga09592_22409_c1 3300050508 Bacteria 5212
189 nmdc:mga09592_4889_c1 3300050508 Bacteria 10853
190 nmdc:mga0qj67_2931_c1 3300050509 Bacteria 12239
191 nmdc:mga06r32_147321_c1 3300050510 Bacteria 2332
192 nmdc:mga06r32_23596_c1 3300050510 Bacteria 5694
193 nmdc:mga06r32_3706_c1 3300050510 Bacteria 13656
194 nmdc:mga08y16_228258_c1 3300050511 Bacteria 1926
195 nmdc:mga08y16_3303_c1 3300050511 Bacteria 16700
196 nmdc:mga08y16_83236_c1 3300050511 Bacteria 3335
197 nmdc:mga0n895_2255_c1 3300050512 Bacteria 14944
198 nmdc:mga0n895_94920_c1 3300050512 Bacteria 2987
199 nmdc:mga0rr50_132030_c1 3300050513 Bacteria 2001
200 nmdc:mga08x19_137003_c1 3300050514 Bacteria 1651
201 nmdc:mga08x19_2160_c1 3300050514 Bacteria 12013
202 nmdc:mga0a205_3185_c1 3300050515 Bacteria 14571
203 nmdc:mga0sz30_267_c1 3300050516 Bacteria 19983
204 nmdc:mga0sz30_6174_c1 3300050516 Bacteria 4437
205 Ga0495601_0007760 3300053077 Bacteria 6309
206 Ga0495612_0001249 3300053078 Bacteria 10483
207 Ga0495595_0007446 3300053084 Bacteria 4482
208 Ga0500647_0064472 3300053091 Bacteria 1762
209 Ga0500651_0039328 3300053093 Bacteria 2978
210 Ga0500658_0033431 3300053134 Bacteria 2022
211 Ga0500568_0004989 3300053139 Bacteria 6959
212 Ga0500568_0007335 3300053139 Bacteria 5420
213 Ga0500586_001473 3300053145 Bacteria 4973
214 Ga0500616_0002146 3300053153 Bacteria 17079
215 Ga0500616_0002849 3300053153 Bacteria 13898
216 Ga0500616_0054894 3300053153 Bacteria 2085
217 Ga0501084_0008974 3300054114 Bacteria 8270
218 Ga0501082_0070149 3300060353 Bacteria 3017
219 Ga0530510_0010154 3300061734 Bacteria 6599

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300027665 Ga0209983_1000242 Ga0209983_10002428 407
2 3300025291 Ga0209675_1002047 Ga0209675_100204711 419
3 3300005843 Ga0068860_100180706 Ga0068860_1001807062 421
4 3300038443 Ga0395901_0111287 Ga0395901_0111287_22_1374 425
5 3300006871 Ga0075434_100003058 Ga0075434_1000030585 433
6 3300027907 Ga0207428_10000326 Ga0207428_1000032642 440
7 3300049571 Ga0501034_0112272 Ga0501034_0112272_942_2363 440
8 3300053091 Ga0500647_0064472 Ga0500647_0064472_55_1506 443
9 3300005937 Ga0081455_10049653 Ga0081455_100496531 444
10 3300048907 Ga0496104_0033293 Ga0496104_0033293_1354_2775 444
11 3300048913 Ga0496110_0037958 Ga0496110_0037958_2328_3749 444
12 3300048917 Ga0496114_0052336 Ga0496114_0052336_1566_2987 444
13 3300005563 Ga0068855_100028812 Ga0068855_1000288122 445
14 3300025949 Ga0207667_10022256 Ga0207667_100222566 445
15 3300049578 Ga0501042_0083631 Ga0501042_0083631_766_2208 445
16 3300049741 Ga0501079_0044388 Ga0501079_0044388_119_1561 445
17 3300061734 Ga0530510_0010154 Ga0530510_0010154_1717_3159 445
18 3300006846 Ga0075430_100023053 Ga0075430_1000230532 446
19 3300006847 Ga0075431_100006517 Ga0075431_1000065172 446
20 3300031456 Ga0307513_10024227 Ga0307513_100242273 446
21 3300050510 nmdc:mga06r32_147321_c1 nmdc:mga06r32_147321_c1_63_1496 446
22 3300053139 Ga0500568_0007335 Ga0500568_0007335_3062_4468 446
23 3300035115 Ga0373941_0006702 Ga0373941_0006702_614_2065 447
24 3300035242 Ga0373962_0014693 Ga0373962_0014693_442_1893 447
25 3300035691 Ga0373931_0036042 Ga0373931_0036042_770_2221 447
26 3300005467 Ga0070706_100015965 Ga0070706_1000159654 449
27 3300006175 Ga0070712_100005623 Ga0070712_1000056232 449
28 3300021384 Ga0213876_10019782 Ga0213876_100197822 449
29 3300025915 Ga0207693_10049038 Ga0207693_100490383 449
30 3300025916 Ga0207663_10112224 Ga0207663_101122241 449
31 3300039437 Ga0436365_0437771 Ga0436365_0437771_2938_4392 449
32 3300046660 Ga0495625_0072401 Ga0495625_0072401_347_1804 449
33 3300050492 nmdc:mga0yw44_2070_c1 nmdc:mga0yw44_2070_c1_4112_5569 449
34 3300005545 Ga0070695_100019681 Ga0070695_1000196813 451
35 3300049823 Ga0501044_0160759 Ga0501044_0160759_697_2121 451
36 3300050492 nmdc:mga0yw44_70445_c1 nmdc:mga0yw44_70445_c1_625_2094 451
37 iso_pu_bacteria 2883291878 2883296632 451
38 iso_pu_bacteria 2883354860 2883359356 451
39 3300005844 Ga0068862_100006836 Ga0068862_1000068365 452
40 3300007265 Ga0099794_10020240 Ga0099794_100202403 452
41 3300009093 Ga0105240_10046348 Ga0105240_100463482 452
42 3300025297 Ga0209758_1022155 Ga0209758_10221553 452
43 3300025304 Ga0209257_1000477 Ga0209257_100047774 452
44 3300028380 Ga0268265_10003860 Ga0268265_100038605 452
45 3300029957 Ga0265324_10015642 Ga0265324_100156422 452
46 3300031711 Ga0265314_10100324 Ga0265314_101003242 452
47 3300037466 Ga0395898_0007556 Ga0395898_0007556_2181_3608 452
48 3300038443 Ga0395901_0006779 Ga0395901_0006779_4245_5672 452
49 3300049571 Ga0501034_0001184 Ga0501034_0001184_18449_19903 452
50 3300053153 Ga0500616_0002849 Ga0500616_0002849_10684_12096 452
51 iso_pu_bacteria 2929199973 2929200349 452
52 iso_pu_bacteria 8055909800 8055912473 452
53 3300005353 Ga0070669_100029018 Ga0070669_1000290182 453
54 3300009147 Ga0114129_10052192 Ga0114129_100521922 453
55 3300013306 Ga0163162_10011610 Ga0163162_100116105 453
56 3300014325 Ga0163163_10091846 Ga0163163_100918463 453
57 3300025254 Ga0209148_1000484 Ga0209148_100048421 453
58 3300025272 Ga0209455_1001745 Ga0209455_10017455 453
59 3300025923 Ga0207681_10086405 Ga0207681_100864051 453
60 3300047472 Ga0495686_0047301 Ga0495686_0047301_1113_2528 453
61 3300049744 Ga0501083_0004171 Ga0501083_0004171_4520_5965 453
62 3300006847 Ga0075431_100002805 Ga0075431_1000028054 454
63 3300038725 Ga0400484_39121 Ga0400484_39121_3336_4757 454
64 3300039062 Ga0400483_080062 Ga0400483_080062_3792_5213 454
65 3300039062 Ga0400483_226652 Ga0400483_226652_6502_7923 454
66 3300049568 Ga0501031_0015945 Ga0501031_0015945_3124_4557 454
67 3300049569 Ga0501032_0004971 Ga0501032_0004971_837_2270 454
68 3300049571 Ga0501034_0022966 Ga0501034_0022966_1033_2466 454
69 3300049572 Ga0501036_0018083 Ga0501036_0018083_3505_4938 454
70 3300049574 Ga0501038_0006203 Ga0501038_0006203_8960_10393 454
71 3300049580 Ga0501046_0001388 Ga0501046_0001388_21096_22529 454
72 3300049582 Ga0501048_0100801 Ga0501048_0100801_367_1800 454
73 3300049586 Ga0501070_0022958 Ga0501070_0022958_3365_4798 454
74 3300049589 Ga0501073_0004259 Ga0501073_0004259_8575_10008 454
75 3300049742 Ga0501080_0125279 Ga0501080_0125279_23_1456 454
76 3300049744 Ga0501083_0003049 Ga0501083_0003049_9218_10651 454
77 3300049822 Ga0501035_0004889 Ga0501035_0004889_2178_3611 454
78 3300049823 Ga0501044_0115682 Ga0501044_0115682_77_1510 454
79 3300053145 Ga0500586_001473 Ga0500586_001473_3401_4816 454
80 3300053153 Ga0500616_0054894 Ga0500616_0054894_254_1669 454
81 3300054114 Ga0501084_0008974 Ga0501084_0008974_3586_5019 454
82 3300060353 Ga0501082_0070149 Ga0501082_0070149_1050_2483 454
83 3300006847 Ga0075431_100039275 Ga0075431_1000392752 455
84 3300006880 Ga0075429_100020691 Ga0075429_1000206912 455
85 3300009147 Ga0114129_10028063 Ga0114129_100280633 455
86 3300050507 nmdc:mga05p37_500_c1 nmdc:mga05p37_500_c1_9875_11305 455
87 3300050508 nmdc:mga09592_4889_c1 nmdc:mga09592_4889_c1_5895_7325 455
88 3300050510 nmdc:mga06r32_23596_c1 nmdc:mga06r32_23596_c1_202_1632 455
89 iso_pu_bacteria 2883577096 2883579861 455
90 iso_pu_bacteria 2894772417 2894774740 455
91 3300005355 Ga0070671_100055928 Ga0070671_1000559282 456
92 3300039093 Ga0400489_34432 Ga0400489_34432_12216_13712 456
93 3300006844 Ga0075428_100000581 Ga0075428_10000058128 457
94 3300006880 Ga0075429_100011647 Ga0075429_1000116476 457
95 3300009094 Ga0111539_10007241 Ga0111539_1000724111 457
96 3300009147 Ga0114129_10099984 Ga0114129_100999841 457
97 3300027907 Ga0207428_10010533 Ga0207428_100105333 457
98 3300050508 nmdc:mga09592_22409_c1 nmdc:mga09592_22409_c1_1834_3273 457
99 3300050511 nmdc:mga08y16_83236_c1 nmdc:mga08y16_83236_c1_1749_3188 457
100 3300005577 Ga0068857_100137578 Ga0068857_1001375782 458
101 3300006186 Ga0075369_10008403 Ga0075369_100084032 458
102 3300006195 Ga0075366_10032875 Ga0075366_100328753 458
103 3300006847 Ga0075431_100009150 Ga0075431_1000091506 458
104 3300020082 Ga0206353_11597751 Ga0206353_115977512 458
105 3300026116 Ga0207674_10066081 Ga0207674_100660813 458
106 3300027665 Ga0209983_1012991 Ga0209983_10129911 458
107 3300035111 Ga0373923_0022248 Ga0373923_0022248_58_1500 458
108 3300037312 Ga0395899_0006549 Ga0395899_0006549_5116_6561 458
109 3300037418 Ga0395900_0006279 Ga0395900_0006279_10357_11802 458
110 3300037418 Ga0395900_0019809 Ga0395900_0019809_1980_3425 458
111 3300038443 Ga0395901_0001404 Ga0395901_0001404_4770_6215 458
112 3300045976 Ga0466967_0054557 Ga0466967_0054557_1538_2992 458
113 3300046536 Ga0495587_0030374 Ga0495587_0030374_1672_3114 458
114 3300048922 Ga0496119_0016568 Ga0496119_0016568_939_2381 458
115 3300050493 nmdc:mga0k408_52432_c1 nmdc:mga0k408_52432_c1_326_1774 458
116 3300050507 nmdc:mga05p37_10325_c1 nmdc:mga05p37_10325_c1_8403_9905 458
117 3300050509 nmdc:mga0qj67_2931_c1 nmdc:mga0qj67_2931_c1_8293_9795 458
118 3300050510 nmdc:mga06r32_3706_c1 nmdc:mga06r32_3706_c1_436_1938 458
119 3300050516 nmdc:mga0sz30_267_c1 nmdc:mga0sz30_267_c1_6974_8422 458
120 3300005456 Ga0070678_100086031 Ga0070678_1000860312 459
121 3300005471 Ga0070698_100008378 Ga0070698_1000083787 459
122 3300005548 Ga0070665_100018082 Ga0070665_1000180825 459
123 3300005937 Ga0081455_10000636 Ga0081455_1000063616 459
124 3300005985 Ga0081539_10002734 Ga0081539_100027345 459
125 3300006178 Ga0075367_10052999 Ga0075367_100529992 459
126 3300006186 Ga0075369_10004129 Ga0075369_100041292 459
127 3300007265 Ga0099794_10018254 Ga0099794_100182543 459
128 3300021384 Ga0213876_10006742 Ga0213876_100067421 459
129 3300025912 Ga0207707_10086619 Ga0207707_100866192 459
130 3300025915 Ga0207693_10103383 Ga0207693_101033832 459
131 3300026041 Ga0207639_10156468 Ga0207639_101564682 459
132 3300028379 Ga0268266_10004492 Ga0268266_100044928 459
133 3300035114 Ga0373939_0007897 Ga0373939_0007897_368_1819 459
134 3300035170 Ga0373943_0049766 Ga0373943_0049766_288_1745 459
135 3300035172 Ga0373955_0027647 Ga0373955_0027647_498_1955 459
136 3300035410 Ga0373924_0015606 Ga0373924_0015606_1184_2641 459
137 3300035691 Ga0373931_0049510 Ga0373931_0049510_265_1716 459
138 3300035692 Ga0373935_0065555 Ga0373935_0065555_791_2242 459
139 3300035725 Ga0373947_0077903 Ga0373947_0077903_181_1632 459
140 3300036401 Ga0373937_0002892 Ga0373937_0002892_9927_11384 459
141 3300036401 Ga0373937_0107536 Ga0373937_0107536_916_2472 459
142 3300039438 Ga0436360_1045723 Ga0436360_1045723_3493_4947 459
143 3300039447 Ga0436361_0011544 Ga0436361_0011544_3220_4674 459
144 3300046459 Ga0495629_0056500 Ga0495629_0056500_582_2033 459
145 3300046477 Ga0495664_0013572 Ga0495664_0013572_1463_2920 459
146 3300046516 Ga0495628_0053831 Ga0495628_0053831_548_2005 459
147 3300046543 Ga0495645_0015239 Ga0495645_0015239_605_2062 459
148 3300046559 Ga0495667_0037124 Ga0495667_0037124_494_1951 459
149 3300046675 Ga0495657_0023646 Ga0495657_0023646_1893_3350 459
150 3300046678 Ga0495599_0023601 Ga0495599_0023601_2051_3508 459
151 3300046679 Ga0495623_0044484 Ga0495623_0044484_999_2456 459
152 3300047317 Ga0495604_0011210 Ga0495604_0011210_2630_4087 459
153 3300047319 Ga0495674_0011596 Ga0495674_0011596_1309_2766 459
154 3300047444 Ga0495675_0025995 Ga0495675_0025995_2041_3498 459
155 3300047471 Ga0495684_0029800 Ga0495684_0029800_1334_2791 459
156 3300048088 Ga0495602_0005915 Ga0495602_0005915_1560_3017 459
157 3300048915 Ga0496112_0121943 Ga0496112_0121943_182_1633 459
158 3300049823 Ga0501044_0082585 Ga0501044_0082585_599_2047 459
159 3300053077 Ga0495601_0007760 Ga0495601_0007760_3485_4942 459
160 3300053078 Ga0495612_0001249 Ga0495612_0001249_2243_3700 459
161 3300053084 Ga0495595_0007446 Ga0495595_0007446_1689_3146 459
162 3300053093 Ga0500651_0039328 Ga0500651_0039328_64_1515 459
163 3300053134 Ga0500658_0033431 Ga0500658_0033431_217_1683 459
164 3300053139 Ga0500568_0004989 Ga0500568_0004989_4222_5688 459
165 3300053153 Ga0500616_0002146 Ga0500616_0002146_1618_3069 459
166 3300005336 Ga0070680_100003898 Ga0070680_1000038984 460
167 3300005341 Ga0070691_10012027 Ga0070691_100120271 460
168 3300005563 Ga0068855_100046360 Ga0068855_1000463603 460
169 3300005614 Ga0068856_100010309 Ga0068856_1000103098 460
170 3300009093 Ga0105240_10007344 Ga0105240_100073443 460
171 3300013296 Ga0157374_10073456 Ga0157374_100734562 460
172 3300025913 Ga0207695_10113517 Ga0207695_101135172 460
173 3300025913 Ga0207695_10117723 Ga0207695_101177232 460
174 3300025917 Ga0207660_10010263 Ga0207660_100102634 460
175 3300025921 Ga0207652_10025858 Ga0207652_100258583 460
176 3300025949 Ga0207667_10075366 Ga0207667_100753663 460
177 3300026078 Ga0207702_10032596 Ga0207702_100325963 460
178 3300026116 Ga0207674_10120346 Ga0207674_101203462 460
179 3300026142 Ga0207698_10026461 Ga0207698_100264613 460
180 3300035695 Ga0373927_0085614 Ga0373927_0085614_38_1498 460
181 3300037418 Ga0395900_0005778 Ga0395900_0005778_7646_9097 460
182 3300037466 Ga0395898_0031658 Ga0395898_0031658_1980_3437 460
183 3300045976 Ga0466967_0078806 Ga0466967_0078806_720_2168 460
184 3300046472 Ga0495580_0004048 Ga0495580_0004048_4043_5494 460
185 3300048925 Ga0496122_0022415 Ga0496122_0022415_3737_5194 460
186 3300048926 Ga0496123_0024852 Ga0496123_0024852_1937_3394 460
187 3300049571 Ga0501034_0001155 Ga0501034_0001155_18385_19836 460
188 3300050511 nmdc:mga08y16_228258_c1 nmdc:mga08y16_228258_c1_48_1526 460
189 3300050516 nmdc:mga0sz30_6174_c1 nmdc:mga0sz30_6174_c1_1938_3392 460
190 3300025910 Ga0207684_10004205 Ga0207684_100042058 461
191 3300042439 Ga0439464_0020397 Ga0439464_0020397_276_1706 466
192 3300049573 Ga0501037_0074879 Ga0501037_0074879_180_1610 466
193 3300006914 Ga0075436_100101693 Ga0075436_1001016931 467
194 3300007076 Ga0075435_100139479 Ga0075435_1001394791 467
195 3300050512 nmdc:mga0n895_94920_c1 nmdc:mga0n895_94920_c1_94_1527 467
196 3300050514 nmdc:mga08x19_137003_c1 nmdc:mga08x19_137003_c1_64_1497 467
197 3300003503 JGI26141J51220_1000137 JGI26141J51220_10001372 468
198 3300005328 Ga0070676_10057769 Ga0070676_100577692 468
199 3300005444 Ga0070694_100022899 Ga0070694_1000228993 468
200 3300005545 Ga0070695_100001304 Ga0070695_1000013044 468
201 3300005983 Ga0081540_1027199 Ga0081540_10271992 468
202 3300006844 Ga0075428_100024570 Ga0075428_1000245704 468
203 3300006852 Ga0075433_10004860 Ga0075433_100048608 468
204 3300006871 Ga0075434_100013216 Ga0075434_1000132167 468
205 3300006914 Ga0075436_100003701 Ga0075436_1000037013 468
206 3300007076 Ga0075435_100006505 Ga0075435_1000065055 468
207 3300009094 Ga0111539_10004738 Ga0111539_100047388 468
208 3300009147 Ga0114129_10006588 Ga0114129_100065886 468
209 3300013307 Ga0157372_10120150 Ga0157372_101201502 468
210 3300025933 Ga0207706_10039110 Ga0207706_100391103 468
211 3300027395 Ga0209996_1000979 Ga0209996_10009792 468
212 3300027471 Ga0209995_1000412 Ga0209995_10004122 468
213 3300027543 Ga0209999_1001833 Ga0209999_10018333 468
214 3300027617 Ga0210002_1001382 Ga0210002_10013822 468
215 3300027682 Ga0209971_1000034 Ga0209971_100003428 468
216 3300027695 Ga0209966_1000109 Ga0209966_100010917 468
217 3300027717 Ga0209998_10000010 Ga0209998_1000001068 468
218 3300027876 Ga0209974_10001764 Ga0209974_100017644 468
219 3300045051 Ga0451576_0096373 Ga0451576_0096373_449_1885 468
220 3300050507 nmdc:mga05p37_174728_c1 nmdc:mga05p37_174728_c1_432_1961 468
221 3300050511 nmdc:mga08y16_3303_c1 nmdc:mga08y16_3303_c1_10470_11939 468
222 3300050512 nmdc:mga0n895_2255_c1 nmdc:mga0n895_2255_c1_8816_10345 468
223 3300050513 nmdc:mga0rr50_132030_c1 nmdc:mga0rr50_132030_c1_177_1706 468
224 3300050514 nmdc:mga08x19_2160_c1 nmdc:mga08x19_2160_c1_8920_10449 468
225 3300050515 nmdc:mga0a205_3185_c1 nmdc:mga0a205_3185_c1_8629_10158 468

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

64

491

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c62-assembly1.cif.gz_A an unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. 0.9228 9 460
2dc0-assembly1.cif.gz_B crystal structure of amidase 0.9228 9 459
1o9q-assembly1.cif.gz_A crystal structure of the s155c mutant of malonamidase e2 from bradyrhizobium japonicum 0.9201 9 466
6c6g-assembly1.cif.gz_B-2 an unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. inhibitor bound complex. 0.9193 9 460
1ocl-assembly1.cif.gz_A the crystal structure of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.9181 9 466
ID Description Score Start End Superfamily
6c6gA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9208 9 455 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9203 11 467 3.90.1300.10
af_A0A0P0XRM7_54_372_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9197 9 241 3.90.1300.10
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9166 9 467 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9163 11 467 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A2V6R4J8-F1-model_v4 Amidase 0.9892 1 451 GO:0003824
AF-A0A1H0TQG8-F1-model_v4 Amidase 0.9856 5 199 GO:0003824
AF-A0A3B8PY46-F1-model_v4 Amidase 0.9852 3 162 GO:0003824
AF-A0A656JW49-F1-model_v4 Amidase 0.9825 2 196 GO:0003824
AF-A0A531K3K4-F1-model_v4 Amidase 0.9825 13 203 GO:0012505

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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