F336903

General Info

Members Datasets Scaffolds Average Seq Length
224 174 448 247

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10044538|Ga0307407_100445383
Length 288
Sequence MTRQKIRPSRTSRGFPCCDINTVHVSGQEKAPSAALTVDGSVRDSSPVRTILITGGNGGLGRGIGRYLLERDAECRVWLGVRANRAEAEKLVGEFDGRCRLIDLDVTSAADWKRAVEEIVSADGRLDVLVNNAGLHRDHLLAAMPEEAWHEVIASNLDSVFHGCRAVVEPMMRQRFGRIVNIASLSAILPPLGQTNYAAAKAGVVAFTRTMAKEVARYGITVNALLPGYIETEALVHMDDEARKQARLGIPMRRFGKPEEVAAAVAFLTCQDAGYVTGSALKIDGGIF

Samples

Sample ID Description Type Environment
1 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
7 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
8 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
95 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
96 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
97 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
98 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
99 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
100 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
104 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
105 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
106 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
107 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
108 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
121 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
122 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
130 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
131 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
132 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
133 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
134 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
138 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
139 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
140 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
144 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
147 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
148 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
149 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049525 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F21_B_7_control Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
173 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
174 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.77
Metatranscriptomes 0.89
Isolates 1.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.89
Nodule 0
Rhizoplane 1.34
Rhizosphere 90.18
Stem 0
Stem Tuber 0
Unclassified 3.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307407_10044538 3300031903 Bacteria 2501
2 JGI24746J21847_1002745 3300001977 Bacteria 2775
3 JGI24739J22299_10000299 3300001989 Bacteria 16806
4 JGI24737J22298_10053067 3300001990 Bacteria 1228
5 JGI24744J21845_10001392 3300002077 Bacteria 4789
6 JGI24033J26618_1002354 3300002155 Bacteria 1929
7 JGI25156J39149_1005937 3300002705 Bacteria 3421
8 JGI25152J39213_1002380 3300002773 Bacteria 7200
9 JGI25165J46597_1004342 3300003214 Bacteria 3079
10 rootH2_10016349 3300003320 Bacteria 22232
11 rootH2_10059329 3300003320 Bacteria 9016
12 rootH2_10132581 3300003320 Bacteria 3518
13 rootH1_10061424 3300003323 Bacteria 4816
14 Ga0065715_10026368 3300005293 Bacteria 1414
15 Ga0065707_10150963 3300005295 Bacteria 1659
16 Ga0070658_10001952 3300005327 Bacteria 17346
17 Ga0070658_10145432 3300005327 Bacteria 1982
18 Ga0070676_10008819 3300005328 Bacteria 5444
19 Ga0070683_100042547 3300005329 Bacteria 4183
20 Ga0070680_100034310 3300005336 Bacteria 4090
21 Ga0070689_100018291 3300005340 Bacteria 5161
22 Ga0070661_100003105 3300005344 Bacteria 11426
23 Ga0070692_10127147 3300005345 Bacteria 1428
24 Ga0070668_100130346 3300005347 Bacteria 2018
25 Ga0070674_100037354 3300005356 Bacteria 3266
26 Ga0070714_100064358 3300005435 Unclassified 3156
27 Ga0070714_100394944 3300005435 Unclassified 1306
28 Ga0070700_100128629 3300005441 Bacteria 1706
29 Ga0070663_100084877 3300005455 Bacteria 2335
30 Ga0070662_100003475 3300005457 Bacteria 9822
31 Ga0070662_100054898 3300005457 Bacteria 2888
32 Ga0068867_100000141 3300005459 Bacteria 46368
33 Ga0068867_100040658 3300005459 Bacteria 3395
34 Ga0068853_100016330 3300005539 Bacteria 6108
35 Ga0070672_100021482 3300005543 Bacteria 4724
36 Ga0070704_100293274 3300005549 Bacteria 1352
37 Ga0068855_100184028 3300005563 Bacteria 2361
38 Ga0070664_100000850 3300005564 Bacteria 23587
39 Ga0070664_100154102 3300005564 Bacteria 2029
40 Ga0068857_100027799 3300005577 Bacteria 4988
41 Ga0068854_100005475 3300005578 Bacteria 8022
42 Ga0068854_100129773 3300005578 Bacteria 1923
43 Ga0068864_100212750 3300005618 Bacteria 1781
44 Ga0068866_10045126 3300005718 Bacteria 2209
45 Ga0068861_100095070 3300005719 Bacteria 2359
46 Ga0068858_100100473 3300005842 Unclassified 2698
47 Ga0068862_100005618 3300005844 Bacteria 10481
48 Ga0068871_100394619 3300006358 Bacteria 1231
49 Ga0075428_100022351 3300006844 Bacteria 7001
50 Ga0075428_100285435 3300006844 Bacteria 1776
51 Ga0075430_100021561 3300006846 Bacteria 5475
52 Ga0075430_100027018 3300006846 Bacteria 4881
53 Ga0075431_100225848 3300006847 Bacteria 1909
54 Ga0068865_100097332 3300006881 Bacteria 2147
55 Ga0068865_100099409 3300006881 Bacteria 2127
56 Ga0105240_10000206 3300009093 Bacteria 119835
57 Ga0105240_10029680 3300009093 Bacteria 7117
58 Ga0105240_10572625 3300009093 Bacteria 1247
59 Ga0111539_10213253 3300009094 Bacteria 2250
60 Ga0111539_10744894 3300009094 Bacteria 1140
61 Ga0105245_10163956 3300009098 Bacteria 2111
62 Ga0114129_11138397 3300009147 Bacteria 975
63 Ga0105243_10000040 3300009148 Bacteria 160788
64 Ga0105238_10013484 3300009551 Bacteria 8251
65 Ga0105238_10657021 3300009551 Bacteria 1059
66 Ga0105249_10048099 3300009553 Bacteria 3889
67 Ga0105239_10000367 3300010375 Bacteria 66191
68 Ga0157373_10000618 3300013100 Bacteria 27838
69 Ga0157370_10004281 3300013104 Bacteria 16435
70 Ga0157380_10222372 3300014326 Bacteria 1690
71 Ga0206353_11058917 3300020082 Bacteria 1299
72 Ga0213875_10005665 3300021388 Bacteria 6668
73 Ga0209759_1005027 3300025256 Bacteria 4751
74 Ga0207645_10007223 3300025907 Bacteria 7867
75 Ga0207705_10003494 3300025909 Bacteria 11959
76 Ga0207705_10114636 3300025909 Bacteria 1994
77 Ga0207684_10648387 3300025910 Bacteria 900
78 Ga0207707_10156333 3300025912 Bacteria 1994
79 Ga0207695_10000340 3300025913 Bacteria 110235
80 Ga0207695_10022652 3300025913 Bacteria 7121
81 Ga0207695_10057793 3300025913 Bacteria 4029
82 Ga0207663_10239893 3300025916 Bacteria 1329
83 Ga0207660_10047311 3300025917 Bacteria 3040
84 Ga0207662_10254052 3300025918 Bacteria 1155
85 Ga0207649_10030264 3300025920 Bacteria 3205
86 Ga0207681_10153028 3300025923 Bacteria 1730
87 Ga0207694_10021536 3300025924 Bacteria 4885
88 Ga0207706_10002108 3300025933 Bacteria 19463
89 Ga0207706_10016056 3300025933 Bacteria 6768
90 Ga0207709_10000075 3300025935 Bacteria 174404
91 Ga0207669_10031630 3300025937 Bacteria 2959
92 Ga0207704_10074287 3300025938 Bacteria 2169
93 Ga0207691_10008247 3300025940 Bacteria 10002
94 Ga0207661_10068754 3300025944 Bacteria 2885
95 Ga0207679_10001275 3300025945 Bacteria 15953
96 Ga0207667_10155415 3300025949 Bacteria 2354
97 Ga0207712_10255275 3300025961 Bacteria 1419
98 Ga0207668_10267382 3300025972 Bacteria 1396
99 Ga0207640_10005431 3300025981 Bacteria 6946
100 Ga0207640_10104011 3300025981 Bacteria 1998
101 Ga0207639_10005772 3300026041 Bacteria 8380
102 Ga0207678_10006031 3300026067 Bacteria 10781
103 Ga0207708_10105842 3300026075 Bacteria 2181
104 Ga0207702_10043439 3300026078 Unclassified 3773
105 Ga0207648_10003338 3300026089 Bacteria 16865
106 Ga0207648_10006911 3300026089 Bacteria 11244
107 Ga0207676_10204112 3300026095 Bacteria 1749
108 Ga0207674_10015758 3300026116 Bacteria 8292
109 Ga0207674_10170413 3300026116 Bacteria 2130
110 Ga0207675_100011249 3300026118 Bacteria 8381
111 Ga0210002_1000378 3300027617 Bacteria 6068
112 Ga0209983_1009836 3300027665 Bacteria 1955
113 Ga0209998_10016012 3300027717 Bacteria 1575
114 Ga0209974_10013451 3300027876 Bacteria 2725
115 Ga0268265_10007840 3300028380 Bacteria 7206
116 Ga0265326_10018838 3300028558 Bacteria 1985
117 Ga0265326_10056402 3300028558 Bacteria 1111
118 Ga0265319_1068910 3300028563 Bacteria 1136
119 Ga0265334_10024430 3300028573 Bacteria 2450
120 Ga0265334_10092842 3300028573 Bacteria 1099
121 Ga0265318_10013641 3300028577 Bacteria 3426
122 Ga0265323_10000049 3300028653 Bacteria 64975
123 Ga0265322_10008839 3300028654 Bacteria 2930
124 Ga0265336_10012449 3300028666 Bacteria 2863
125 Ga0307515_10289832 3300028794 Bacteria 1334
126 Ga0265338_10000016 3300028800 Bacteria 347424
127 Ga0265338_10013064 3300028800 Bacteria 9410
128 Ga0265338_10024388 3300028800 Bacteria 6179
129 Ga0265338_10025357 3300028800 Bacteria 6020
130 Ga0265338_10039737 3300028800 Bacteria 4432
131 Ga0265338_10176703 3300028800 Bacteria 1631
132 Ga0265324_10021302 3300029957 Bacteria 2325
133 Ga0265324_10027834 3300029957 Bacteria 1995
134 Ga0265320_10025070 3300031240 Bacteria 3141
135 Ga0265320_10053253 3300031240 Bacteria 1956
136 Ga0265325_10027226 3300031241 Bacteria 3091
137 Ga0265340_10001764 3300031247 Bacteria 12361
138 Ga0265339_10049845 3300031249 Bacteria 2291
139 Ga0265331_10041428 3300031250 Bacteria 2238
140 Ga0265327_10001634 3300031251 Bacteria 27015
141 Ga0265327_10001754 3300031251 Bacteria 25646
142 Ga0265316_10030350 3300031344 Bacteria 4432
143 Ga0265316_10036697 3300031344 Bacteria 3962
144 Ga0265316_10100616 3300031344 Bacteria 2197
145 Ga0307408_100000325 3300031548 Bacteria 45762
146 Ga0307408_100014034 3300031548 Bacteria 5323
147 Ga0307408_100020331 3300031548 Bacteria 4479
148 Ga0265313_10024663 3300031595 Bacteria 3207
149 Ga0265314_10022627 3300031711 Bacteria 4813
150 Ga0265314_10058947 3300031711 Bacteria 2629
151 Ga0265342_10246948 3300031712 Bacteria 954
152 Ga0307410_10024697 3300031852 Bacteria 3758
153 Ga0307407_10016605 3300031903 Bacteria 3669
154 Ga0307412_10000046 3300031911 Bacteria 163839
155 Ga0307412_10019189 3300031911 Bacteria 4134
156 Ga0307412_10081578 3300031911 Bacteria 2237
157 Ga0307409_100007502 3300031995 Bacteria 6533
158 Ga0307416_100010230 3300032002 Bacteria 6185
159 Ga0307414_10184388 3300032004 Bacteria 1682
160 Ga0307411_10001422 3300032005 Bacteria 9755
161 Ga0307411_10040059 3300032005 Bacteria 2969
162 Ga0316583_10000703 3300032133 Bacteria 10352
163 Ga0316588_1032645 3300033528 Bacteria 1226
164 Ga0373943_0372319 3300035170 Unclassified 821
165 Ga0373927_0002179 3300035695 Bacteria 14387
166 Ga0373937_0097146 3300036401 Unclassified 2732
167 Ga0373937_0530303 3300036401 Unclassified 1119
168 Ga0373937_0663196 3300036401 Bacteria 989
169 Ga0316582_0121494 3300036647 Bacteria 1748
170 Ga0373925_0142504 3300037068 Bacteria 1877
171 Ga0395900_0181880 3300037418 Bacteria 2136
172 Ga0400483_285358 3300039062 Bacteria 2297
173 Ga0400489_87835 3300039093 Bacteria 12615
174 Ga0436360_1053506 3300039438 Bacteria 1264
175 Ga0450890_000003 3300042127 Bacteria 110079
176 Ga0450892_000497 3300042130 Bacteria 4555
177 Ga0450893_0000064 3300042532 Bacteria 11292
178 Ga0450893_0025321 3300042532 Bacteria 1039
179 Ga0451577_0741112 3300042876 Bacteria 889
180 Ga0453684_0090848 3300044712 Bacteria 3772
181 Ga0453684_0309040 3300044712 Bacteria 1795
182 Ga0495592_0000355 3300046454 Bacteria 37104
183 Ga0495580_0016768 3300046472 Bacteria 5497
184 Ga0495662_0122775 3300046476 Bacteria 1275
185 Ga0495664_0010765 3300046477 Bacteria 5141
186 Ga0495628_0000354 3300046516 Bacteria 41766
187 Ga0495630_0004948 3300046517 Bacteria 9370
188 Ga0495644_0071463 3300046523 Bacteria 1304
189 Ga0495666_0188939 3300046526 Bacteria 949
190 Ga0495652_0039128 3300046529 Bacteria 4102
191 Ga0495640_0019813 3300046533 Bacteria 4961
192 Ga0495586_0009379 3300046535 Bacteria 5207
193 Ga0495586_0175673 3300046535 Unclassified 1211
194 Ga0495645_0003468 3300046543 Bacteria 10698
195 Ga0495661_0223411 3300046665 Bacteria 975
196 Ga0495581_0281877 3300047315 Bacteria 971
197 Ga0495674_0005909 3300047319 Bacteria 11744
198 Ga0496102_0022223 3300048905 Bacteria 5618
199 Ga0496103_0007826 3300048906 Bacteria 6350
200 Ga0496105_0308840 3300048908 Bacteria 1270
201 Ga0496116_0017288 3300048919 Bacteria 5606
202 Ga0496117_0016528 3300048920 Bacteria 6223
203 Ga0496118_0021675 3300048921 Bacteria 5646
204 Ga0496121_0001643 3300048924 Bacteria 36938
205 Ga0496124_0023348 3300048927 Bacteria 5646
206 Ga0496126_0009205 3300048929 Bacteria 10535
207 Ga0501302_005682 3300049525 Bacteria 789
208 Ga0501033_0025734 3300049570 Bacteria 4433
209 Ga0501040_0707344 3300049576 Bacteria 729
210 Ga0501041_0033553 3300049577 Bacteria 3106
211 Ga0501068_0356241 3300049584 Bacteria 941
212 Ga0501076_0056212 3300049592 Bacteria 3123
213 Ga0501077_0133278 3300049593 Bacteria 1576
214 nmdc:mga09592_317408_c1 3300050508 Bacteria 1350
215 nmdc:mga0qj67_29372_c1 3300050509 Bacteria 4270
216 nmdc:mga0qj67_72606_c1 3300050509 Bacteria 2748
217 nmdc:mga06r32_267791_c1 3300050510 Bacteria 1696
218 nmdc:mga06r32_293997_c1 3300050510 Bacteria 1611
219 nmdc:mga06r32_75213_c1 3300050510 Bacteria 3277
220 nmdc:mga08y16_119111_c1 3300050511 Bacteria 2748
221 nmdc:mga08y16_960705_c1 3300050511 Bacteria 837
222 2883293350 2883291878 Bacteria 5894118
223 3005450286 3005445848 Bacteria 6906074
224 8005648675 8005645114 Bacteria 6950293
225 Ga0307407_10044538
226 JGI24746J21847_1002745
227 JGI24739J22299_10000299
228 JGI24737J22298_10053067
229 JGI24744J21845_10001392
230 JGI24033J26618_1002354
231 JGI25156J39149_1005937
232 JGI25152J39213_1002380
233 JGI25165J46597_1004342
234 rootH2_10016349
235 rootH2_10059329
236 rootH2_10132581
237 rootH1_10061424
238 Ga0065715_10026368
239 Ga0065707_10150963
240 Ga0070658_10001952
241 Ga0070658_10145432
242 Ga0070676_10008819
243 Ga0070683_100042547
244 Ga0070680_100034310
245 Ga0070689_100018291
246 Ga0070661_100003105
247 Ga0070692_10127147
248 Ga0070668_100130346
249 Ga0070674_100037354
250 Ga0070714_100064358
251 Ga0070714_100394944
252 Ga0070700_100128629
253 Ga0070663_100084877
254 Ga0070662_100003475
255 Ga0070662_100054898
256 Ga0068867_100000141
257 Ga0068867_100040658
258 Ga0068853_100016330
259 Ga0070672_100021482
260 Ga0070704_100293274
261 Ga0068855_100184028
262 Ga0070664_100000850
263 Ga0070664_100154102
264 Ga0068857_100027799
265 Ga0068854_100005475
266 Ga0068854_100129773
267 Ga0068864_100212750
268 Ga0068866_10045126
269 Ga0068861_100095070
270 Ga0068858_100100473
271 Ga0068862_100005618
272 Ga0068871_100394619
273 Ga0075428_100022351
274 Ga0075428_100285435
275 Ga0075430_100021561
276 Ga0075430_100027018
277 Ga0075431_100225848
278 Ga0068865_100097332
279 Ga0068865_100099409
280 Ga0105240_10000206
281 Ga0105240_10029680
282 Ga0105240_10572625
283 Ga0111539_10213253
284 Ga0111539_10744894
285 Ga0105245_10163956
286 Ga0114129_11138397
287 Ga0105243_10000040
288 Ga0105238_10013484
289 Ga0105238_10657021
290 Ga0105249_10048099
291 Ga0105239_10000367
292 Ga0157373_10000618
293 Ga0157370_10004281
294 Ga0157380_10222372
295 Ga0206353_11058917
296 Ga0213875_10005665
297 Ga0209759_1005027
298 Ga0207645_10007223
299 Ga0207705_10003494
300 Ga0207705_10114636
301 Ga0207684_10648387
302 Ga0207707_10156333
303 Ga0207695_10000340
304 Ga0207695_10022652
305 Ga0207695_10057793
306 Ga0207663_10239893
307 Ga0207660_10047311
308 Ga0207662_10254052
309 Ga0207649_10030264
310 Ga0207681_10153028
311 Ga0207694_10021536
312 Ga0207706_10002108
313 Ga0207706_10016056
314 Ga0207709_10000075
315 Ga0207669_10031630
316 Ga0207704_10074287
317 Ga0207691_10008247
318 Ga0207661_10068754
319 Ga0207679_10001275
320 Ga0207667_10155415
321 Ga0207712_10255275
322 Ga0207668_10267382
323 Ga0207640_10005431
324 Ga0207640_10104011
325 Ga0207639_10005772
326 Ga0207678_10006031
327 Ga0207708_10105842
328 Ga0207702_10043439
329 Ga0207648_10003338
330 Ga0207648_10006911
331 Ga0207676_10204112
332 Ga0207674_10015758
333 Ga0207674_10170413
334 Ga0207675_100011249
335 Ga0210002_1000378
336 Ga0209983_1009836
337 Ga0209998_10016012
338 Ga0209974_10013451
339 Ga0268265_10007840
340 Ga0265326_10018838
341 Ga0265326_10056402
342 Ga0265319_1068910
343 Ga0265334_10024430
344 Ga0265334_10092842
345 Ga0265318_10013641
346 Ga0265323_10000049
347 Ga0265322_10008839
348 Ga0265336_10012449
349 Ga0307515_10289832
350 Ga0265338_10000016
351 Ga0265338_10013064
352 Ga0265338_10024388
353 Ga0265338_10025357
354 Ga0265338_10039737
355 Ga0265338_10176703
356 Ga0265324_10021302
357 Ga0265324_10027834
358 Ga0265320_10025070
359 Ga0265320_10053253
360 Ga0265325_10027226
361 Ga0265340_10001764
362 Ga0265339_10049845
363 Ga0265331_10041428
364 Ga0265327_10001634
365 Ga0265327_10001754
366 Ga0265316_10030350
367 Ga0265316_10036697
368 Ga0265316_10100616
369 Ga0307408_100000325
370 Ga0307408_100014034
371 Ga0307408_100020331
372 Ga0265313_10024663
373 Ga0265314_10022627
374 Ga0265314_10058947
375 Ga0265342_10246948
376 Ga0307410_10024697
377 Ga0307407_10016605
378 Ga0307412_10000046
379 Ga0307412_10019189
380 Ga0307412_10081578
381 Ga0307409_100007502
382 Ga0307416_100010230
383 Ga0307414_10184388
384 Ga0307411_10001422
385 Ga0307411_10040059
386 Ga0316583_10000703
387 Ga0316588_1032645
388 Ga0373943_0372319
389 Ga0373927_0002179
390 Ga0373937_0097146
391 Ga0373937_0530303
392 Ga0373937_0663196
393 Ga0316582_0121494
394 Ga0373925_0142504
395 Ga0395900_0181880
396 Ga0400483_285358
397 Ga0400489_87835
398 Ga0436360_1053506
399 Ga0450890_000003
400 Ga0450892_000497
401 Ga0450893_0000064
402 Ga0450893_0025321
403 Ga0451577_0741112
404 Ga0453684_0090848
405 Ga0453684_0309040
406 Ga0495592_0000355
407 Ga0495580_0016768
408 Ga0495662_0122775
409 Ga0495664_0010765
410 Ga0495628_0000354
411 Ga0495630_0004948
412 Ga0495644_0071463
413 Ga0495666_0188939
414 Ga0495652_0039128
415 Ga0495640_0019813
416 Ga0495586_0009379
417 Ga0495586_0175673
418 Ga0495645_0003468
419 Ga0495661_0223411
420 Ga0495581_0281877
421 Ga0495674_0005909
422 Ga0496102_0022223
423 Ga0496103_0007826
424 Ga0496105_0308840
425 Ga0496116_0017288
426 Ga0496117_0016528
427 Ga0496118_0021675
428 Ga0496121_0001643
429 Ga0496124_0023348
430 Ga0496126_0009205
431 Ga0501302_005682
432 Ga0501033_0025734
433 Ga0501040_0707344
434 Ga0501041_0033553
435 Ga0501068_0356241
436 Ga0501076_0056212
437 Ga0501077_0133278
438 nmdc:mga09592_317408_c1
439 nmdc:mga0qj67_29372_c1
440 nmdc:mga0qj67_72606_c1
441 nmdc:mga06r32_267791_c1
442 nmdc:mga06r32_293997_c1
443 nmdc:mga06r32_75213_c1
444 nmdc:mga08y16_119111_c1
445 nmdc:mga08y16_960705_c1
446 2883293350
447 3005450286
448 8005648675

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

55

287

0.95

PF00106

adh_short

short chain dehydrogenase

49

243

0.94

PF08659

KR

KR domain

49

225

0.9

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

51

226

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nbu-assembly1.cif.gz_D crystal structure of fabg from bacillus sp 0.9727 5 244
3op4-assembly1.cif.gz_A crystal structure of putative 3-ketoacyl-(acyl-carrier-protein) reductase from vibrio cholerae o1 biovar eltor str. n16961 in complex with nadp+ 0.9697 5 244
3rsh-assembly1.cif.gz_B-2 structure of 3-ketoacyl-(acyl-carrier-protein)reductase (fabg) from vibrio cholerae o1 complexed with nadp+ (space group p62) 0.969 5 244
3tzk-assembly1.cif.gz_A crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg)(g92a) from vibrio cholerae 0.9689 5 244
3tzh-assembly3.cif.gz_C crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg)(f187a) from vibrio cholerae 0.9683 5 244
ID Description Score Start End Superfamily
af_Q0JDU3_1_168_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9766 80 244 3.40.50.720
af_B7FAC8_69_312_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9676 5 244 3.40.50.720
4rziB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9631 5 244 3.40.50.720
af_P9WGR9_1_247_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9628 5 244 3.40.50.720
af_A0A1D6J5I0_53_326_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9628 4 244 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q2XDL8-F1-model_v4 SDR family oxidoreductase 0.9955 1 244 GO:0016491
AF-A0A2V5X1B6-F1-model_v4 3-oxoacyl-ACP reductase 0.9939 3 244 GO:0016491
AF-A0A2V5W322-F1-model_v4 3-oxoacyl-ACP reductase 0.9915 4 217 GO:0016616
GO:0030497
AF-A0A4Q2XDL8-F1-model_v4 SDR family oxidoreductase 0.9915 1 244 GO:0016491
AF-X0Y2Z6-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase 0.9904 58 244 GO:0016491

Map