F335622

General Info

Members Datasets Scaffolds Average Seq Length
223 154 209 364

Family's Representative Sequence

Representative Sequence 3300014968|Ga0157379_10000148|Ga0157379_1000014841
Length 411
Sequence MIPRREDAVSTGGTPRETDGPANGQRPANGAAAGPLAALRVVEFAGKGPAPFAAMLLSDLGAQVLRVERVPAPERHPDYRVEHDLLRRGRADVGIDLKTPPGLELALELISSADVLIEGYRPGVMEKLGLGPDVCLARNPRLVYGRATGWGQTGPLAAAAGHDINFLAVSGVLSMLGRAGGPPTPPANILGDFGGGGMLVAVGVLAAALAARTSGRGQVVDASILEGSVLLATLLYGLRAAGQWSDERGTNLLDTGAPYYDVYETADRRWMAVGAVEPRFYHNLLRALGLDSAEFPNPADRSAWPRLRERLTAVFRSRTQAEWVERLSGVDACASPVLTPDEAAVFPHNVERGVYARYQGVTQPAPAPKFSATPGRIPEPAAGRGNPLAGWGVAADRLETLAARGVIVSGG

Samples

Sample ID Description Type Environment
1 2643221569 Achromobacter sp. Root565 Isolate Unclassified
2 2643221621 Achromobacter sp. Root83 Isolate Unclassified
3 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
4 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
5 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
6 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
7 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
8 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
9 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
10 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber
11 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
12 2902330777 Methylobacterium sp. 2A Isolate Unclassified
13 2919395869 Microbacterium resistens 2980 Isolate Unclassified
14 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
99 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
100 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
101 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
102 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
107 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
120 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.27
Metatranscriptomes 0.45
Isolates 6.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.04
Nodule 0
Rhizoplane 6.28
Rhizosphere 70.85
Stem 0
Stem Tuber 0.45
Unclassified 18.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1001113 3300003792 Bacteria 16948
2 Ga0055540_1001796 3300003792 Bacteria 12202
3 Ga0070680_100047616 3300005336 Bacteria 3491
4 Ga0070682_100032680 3300005337 Bacteria 3157
5 Ga0070669_100020939 3300005353 Bacteria 4672
6 Ga0070659_100084338 3300005366 Bacteria 2541
7 Ga0070667_100000142 3300005367 Bacteria 90696
8 Ga0070667_100001381 3300005367 Bacteria 21738
9 Ga0070709_10110252 3300005434 Bacteria 1849
10 Ga0070714_100106731 3300005435 Bacteria 2474
11 Ga0070678_100126257 3300005456 Bacteria 2026
12 Ga0070706_100003526 3300005467 Bacteria 15379
13 Ga0070707_100038026 3300005468 Bacteria 4596
14 Ga0070698_100014087 3300005471 Bacteria 8455
15 Ga0070698_100163905 3300005471 Bacteria 2166
16 Ga0070697_100001603 3300005536 Bacteria 17235
17 Ga0070696_100008654 3300005546 Bacteria 6809
18 Ga0070665_100030032 3300005548 Bacteria 5470
19 Ga0070665_100030463 3300005548 Bacteria 5428
20 Ga0068855_100003070 3300005563 Bacteria 20426
21 Ga0068855_100038816 3300005563 Bacteria 5656
22 Ga0068856_100161350 3300005614 Bacteria 2252
23 Ga0068859_100002676 3300005617 Bacteria 18093
24 Ga0068859_100024470 3300005617 Bacteria 6058
25 Ga0068863_100005045 3300005841 Bacteria 13016
26 Ga0068858_100000326 3300005842 Bacteria 50265
27 Ga0068858_100084082 3300005842 Bacteria 2960
28 Ga0068858_100159014 3300005842 Bacteria 2127
29 Ga0068860_100000209 3300005843 Bacteria 92811
30 Ga0068862_100000211 3300005844 Bacteria 65382
31 Ga0068862_100001164 3300005844 Bacteria 24808
32 Ga0068862_100005913 3300005844 Bacteria 10187
33 Ga0081455_10051527 3300005937 Bacteria 3530
34 Ga0075364_10041424 3300006051 Bacteria 2990
35 Ga0075428_100029310 3300006844 Bacteria 6089
36 Ga0075428_100142059 3300006844 Bacteria 2610
37 Ga0075430_100002464 3300006846 Bacteria 15410
38 Ga0075431_100000366 3300006847 Bacteria 35887
39 Ga0075431_100055138 3300006847 Bacteria 4100
40 Ga0097620_100002676 3300006931 Bacteria 18093
41 Ga0097620_100024470 3300006931 Bacteria 6058
42 Ga0105240_10001533 3300009093 Bacteria 39215
43 Ga0111539_10242472 3300009094 Bacteria 2098
44 Ga0105245_10012433 3300009098 Bacteria 7408
45 Ga0105245_10066094 3300009098 Bacteria 3272
46 Ga0105247_10000224 3300009101 Bacteria 54257
47 Ga0105247_10000277 3300009101 Bacteria 47313
48 Ga0105247_10001320 3300009101 Bacteria 18120
49 Ga0105241_10099381 3300009174 Bacteria 2311
50 Ga0105242_10007810 3300009176 Bacteria 8232
51 Ga0105248_10000242 3300009177 Bacteria 63110
52 Ga0105248_10001448 3300009177 Bacteria 26409
53 Ga0105248_10002138 3300009177 Bacteria 21875
54 Ga0105248_10006817 3300009177 Bacteria 12519
55 Ga0105237_10039843 3300009545 Bacteria 4740
56 Ga0105237_10084281 3300009545 Bacteria 3169
57 Ga0105249_10000031 3300009553 Bacteria 220006
58 Ga0105249_10007234 3300009553 Bacteria 9684
59 Ga0105239_10148270 3300010375 Bacteria 2618
60 Ga0105239_10492823 3300010375 Unclassified 1393
61 Ga0105246_10042019 3300011119 Bacteria 3094
62 Ga0157369_10306068 3300013105 Bacteria 1653
63 Ga0157374_10462279 3300013296 Bacteria 1271
64 Ga0163163_10024583 3300014325 Bacteria 5734
65 Ga0157379_10000148 3300014968 Bacteria 51339
66 Ga0157379_10040497 3300014968 Bacteria 4158
67 Ga0213875_10000107 3300021388 Bacteria 95120
68 Ga0213875_10048933 3300021388 Bacteria 1982
69 Ga0224712_10004792 3300022467 Bacteria 3690
70 Ga0209050_1000859 3300025298 Bacteria 41130
71 Ga0209051_1001272 3300025303 Bacteria 22502
72 Ga0209051_1003693 3300025303 Bacteria 9880
73 Ga0207692_10022456 3300025898 Bacteria 2903
74 Ga0207692_10038777 3300025898 Bacteria 2339
75 Ga0207710_10000022 3300025900 Bacteria 335632
76 Ga0207710_10000023 3300025900 Bacteria 329909
77 Ga0207710_10000065 3300025900 Bacteria 154842
78 Ga0207699_10052906 3300025906 Bacteria 2406
79 Ga0207684_10013131 3300025910 Bacteria 7169
80 Ga0207707_10145121 3300025912 Bacteria 2074
81 Ga0207663_10241938 3300025916 Bacteria 1324
82 Ga0207660_10083580 3300025917 Bacteria 2351
83 Ga0207660_10199266 3300025917 Bacteria 1563
84 Ga0207662_10036339 3300025918 Bacteria 2879
85 Ga0207646_10004405 3300025922 Bacteria 15310
86 Ga0207711_10000329 3300025941 Bacteria 50547
87 Ga0207711_10001070 3300025941 Bacteria 26160
88 Ga0207711_10001828 3300025941 Bacteria 19407
89 Ga0207667_10019822 3300025949 Bacteria 7496
90 Ga0207712_10000029 3300025961 Bacteria 220014
91 Ga0207712_10014595 3300025961 Bacteria 5058
92 Ga0207658_10000113 3300025986 Bacteria 88960
93 Ga0207703_10000021 3300026035 Bacteria 247414
94 Ga0207703_10108354 3300026035 Bacteria 2366
95 Ga0207703_10224461 3300026035 Bacteria 1681
96 Ga0207678_10091544 3300026067 Bacteria 2599
97 Ga0207702_10153681 3300026078 Bacteria 2096
98 Ga0207641_10005750 3300026088 Bacteria 10532
99 Ga0207676_10228246 3300026095 Bacteria 1663
100 Ga0207683_10125857 3300026121 Bacteria 2303
101 Ga0268266_10008771 3300028379 Bacteria 8962
102 Ga0268266_10018556 3300028379 Bacteria 5929
103 Ga0268266_10523942 3300028379 Bacteria 1133
104 Ga0268265_10000040 3300028380 Bacteria 194156
105 Ga0268265_10000895 3300028380 Bacteria 27732
106 Ga0268264_10000017 3300028381 Bacteria 498037
107 Ga0307515_10001182 3300028794 Bacteria 59719
108 Ga0265327_10000002 3300031251 Bacteria 856593
109 Ga0307405_10106057 3300031731 Bacteria 1894
110 Ga0307406_10074925 3300031901 Bacteria 2231
111 Ga0307407_10076118 3300031903 Bacteria 2014
112 Ga0307415_100082623 3300032126 Bacteria 2299
113 Ga0395899_0010261 3300037312 Bacteria 7179
114 Ga0395900_0000021 3300037418 Bacteria 351144
115 Ga0395898_0000846 3300037466 Bacteria 50351
116 Ga0395905_0001499 3300037471 Bacteria 27933
117 Ga0436364_0054143 3300037853 Bacteria 4152
118 Ga0436364_0609479 3300037853 Bacteria 47114
119 Ga0436364_1373077 3300037853 Bacteria 3655
120 Ga0395901_0000495 3300038443 Bacteria 45770
121 Ga0436365_0532581 3300039437 Bacteria 3457
122 Ga0436361_0853529 3300039447 Bacteria 1815
123 Ga0436361_1200442 3300039447 Unclassified 2138
124 Ga0451791_0787644 3300041451 Bacteria 1883
125 Ga0451793_0100085 3300041452 Bacteria 7713
126 Ga0451837_0654817 3300041494 Bacteria 1494
127 Ga0451839_1288043 3300041496 Bacteria 2497
128 Ga0451853_0772154 3300041512 Bacteria 3400
129 Ga0466966_0005555 3300044684 Bacteria 8287
130 Ga0466966_0027510 3300044684 Bacteria 3708
131 Ga0466966_0080994 3300044684 Bacteria 2022
132 Ga0466966_0127155 3300044684 Bacteria 1562
133 Ga0466963_0010054 3300044694 Bacteria 5720
134 Ga0466971_0003469 3300044719 Bacteria 6735
135 Ga0466968_0004163 3300044735 Bacteria 5389
136 Ga0466970_0164862 3300044765 Bacteria 1226
137 Ga0466970_0167852 3300044765 Bacteria 1215
138 Ga0466957_0011259 3300044842 Bacteria 5152
139 Ga0466959_0001861 3300045049 Bacteria 13258
140 Ga0466959_0073894 3300045049 Bacteria 2466
141 Ga0466959_0088839 3300045049 Bacteria 2221
142 Ga0466958_0000204 3300045836 Bacteria 22007
143 Ga0466958_0026661 3300045836 Bacteria 3416
144 Ga0466967_0025220 3300045976 Bacteria 4900
145 Ga0495653_0095495 3300046463 Bacteria 2164
146 Ga0495630_0026309 3300046517 Bacteria 4307
147 Ga0495621_0012706 3300046539 Bacteria 2629
148 Ga0495667_0124457 3300046559 Bacteria 1664
149 Ga0495634_0022732 3300046642 Bacteria 4417
150 Ga0495635_0128550 3300046663 Bacteria 1727
151 Ga0495613_0003096 3300046689 Bacteria 12439
152 Ga0495672_0028458 3300047320 Bacteria 3536
153 Ga0495614_0014561 3300048089 Bacteria 3440
154 Ga0496101_0264463 3300048904 Bacteria 1342
155 Ga0496101_0305486 3300048904 Bacteria 1247
156 Ga0496102_0000197 3300048905 Bacteria 81788
157 Ga0496102_0028696 3300048905 Bacteria 4972
158 Ga0496102_0223315 3300048905 Bacteria 1776
159 Ga0496103_0002808 3300048906 Bacteria 10839
160 Ga0496104_0228002 3300048907 Bacteria 1775
161 Ga0496108_0021742 3300048911 Bacteria 5274
162 Ga0496112_0001085 3300048915 Bacteria 20126
163 Ga0496113_0166705 3300048916 Bacteria 1743
164 Ga0496114_0086042 3300048917 Bacteria 2663
165 Ga0496115_0317441 3300048918 Bacteria 1275
166 Ga0496116_0000270 3300048919 Bacteria 90462
167 Ga0496117_0000160 3300048920 Bacteria 141709
168 Ga0496117_0030618 3300048920 Bacteria 4125
169 Ga0496118_0000391 3300048921 Bacteria 74169
170 Ga0496118_0002342 3300048921 Bacteria 25692
171 Ga0496119_0001770 3300048922 Bacteria 25133
172 Ga0496119_0002099 3300048922 Bacteria 22482
173 Ga0496119_0010052 3300048922 Bacteria 8005
174 Ga0496119_0016881 3300048922 Bacteria 5523
175 Ga0496120_0001007 3300048923 Bacteria 37893
176 Ga0496120_0003069 3300048923 Bacteria 15770
177 Ga0496121_0008660 3300048924 Bacteria 11889
178 Ga0496121_0020302 3300048924 Bacteria 6586
179 Ga0496121_0020337 3300048924 Bacteria 6579
180 Ga0496121_0058924 3300048924 Bacteria 3170
181 Ga0496121_0223887 3300048924 Bacteria 1323
182 Ga0496124_0087192 3300048927 Bacteria 2553
183 Ga0496124_0120647 3300048927 Bacteria 2095
184 Ga0496125_0002281 3300048928 Bacteria 25404
185 Ga0496126_0006693 3300048929 Bacteria 12801
186 Ga0496126_0013864 3300048929 Bacteria 8176
187 Ga0501033_0103000 3300049570 Bacteria 2082
188 Ga0501034_0009698 3300049571 Bacteria 10069
189 Ga0501034_0074704 3300049571 Bacteria 3397
190 Ga0501034_0284736 3300049571 Bacteria 1592
191 Ga0501046_0170106 3300049580 Bacteria 1636
192 Ga0501047_0011128 3300049581 Bacteria 8515
193 Ga0501047_0036019 3300049581 Bacteria 4782
194 Ga0501047_0351218 3300049581 Bacteria 1311
195 Ga0501069_0001447 3300049585 Bacteria 11664
196 Ga0501074_0028429 3300049590 Bacteria 4052
197 Ga0501083_0001988 3300049744 Bacteria 14065
198 Ga0501035_0000257 3300049822 Bacteria 63434
199 Ga0501044_0000568 3300049823 Bacteria 44963
200 Ga0501044_0054137 3300049823 Bacteria 4126
201 nmdc:mga03n38_34317_c1 3300050490 Bacteria 2166
202 nmdc:mga05p37_163378_c1 3300050507 Bacteria 2718
203 nmdc:mga09592_7296_c1 3300050508 Bacteria 8983
204 nmdc:mga0qj67_1091_c1 3300050509 Bacteria 18799
205 nmdc:mga06r32_30687_c1 3300050510 Bacteria 5045
206 nmdc:mga06r32_911_c1 3300050510 Bacteria 26286
207 nmdc:mga0sz30_14950_c1 3300050516 Bacteria 3061
208 nmdc:mga0sz30_42816_c1 3300050516 Bacteria 1905
209 Ga0466962_0005504 3300061719 Bacteria 6084

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013296 Ga0157374_10462279 Ga0157374_104622792 298
2 3300005337 Ga0070682_100032680 Ga0070682_1000326802 306
3 3300005844 Ga0068862_100005913 Ga0068862_1000059133 306
4 3300028379 Ga0268266_10523942 Ga0268266_105239421 306
5 3300048905 Ga0496102_0223315 Ga0496102_0223315_617_1729 314
6 3300044684 Ga0466966_0005555 Ga0466966_0005555_3665_4693 316
7 3300044694 Ga0466963_0010054 Ga0466963_0010054_2542_3570 316
8 3300044719 Ga0466971_0003469 Ga0466971_0003469_1743_2771 316
9 3300044842 Ga0466957_0011259 Ga0466957_0011259_1674_2702 316
10 3300045049 Ga0466959_0088839 Ga0466959_0088839_970_1998 316
11 3300045836 Ga0466958_0000204 Ga0466958_0000204_6585_7613 316
12 3300061719 Ga0466962_0005504 Ga0466962_0005504_1396_2424 316
13 3300049581 Ga0501047_0036019 Ga0501047_0036019_3640_4755 317
14 3300049585 Ga0501069_0001447 Ga0501069_0001447_3069_4184 317
15 3300037853 Ga0436364_1373077 Ga0436364_1373077_393_1559 319
16 3300049744 Ga0501083_0001988 Ga0501083_0001988_8578_9579 322
17 3300013105 Ga0157369_10306068 Ga0157369_103060682 325
18 3300048924 Ga0496121_0058924 Ga0496121_0058924_1749_2942 326
19 3300005617 Ga0068859_100024470 Ga0068859_1000244702 327
20 3300005841 Ga0068863_100005045 Ga0068863_1000050452 327
21 3300005842 Ga0068858_100084082 Ga0068858_1000840822 327
22 3300005844 Ga0068862_100001164 Ga0068862_1000011649 327
23 3300006931 Ga0097620_100024470 Ga0097620_1000244702 327
24 3300009553 Ga0105249_10007234 Ga0105249_100072342 327
25 3300025961 Ga0207712_10014595 Ga0207712_100145952 327
26 3300026035 Ga0207703_10224461 Ga0207703_102244612 327
27 3300026088 Ga0207641_10005750 Ga0207641_100057502 327
28 3300028380 Ga0268265_10000895 Ga0268265_100008958 327
29 3300048905 Ga0496102_0028696 Ga0496102_0028696_340_1554 327
30 3300049590 Ga0501074_0028429 Ga0501074_0028429_2292_3491 327
31 3300049823 Ga0501044_0054137 Ga0501044_0054137_2639_3838 327
32 3300009101 Ga0105247_10000224 Ga0105247_1000022418 328
33 3300048922 Ga0496119_0002099 Ga0496119_0002099_5276_6421 328
34 3300048923 Ga0496120_0001007 Ga0496120_0001007_5213_6358 328
35 3300048924 Ga0496121_0223887 Ga0496121_0223887_79_1224 328
36 3300009094 Ga0111539_10242472 Ga0111539_102424722 329
37 3300009177 Ga0105248_10006817 Ga0105248_100068178 329
38 3300025900 Ga0207710_10000065 Ga0207710_10000065106 329
39 3300025941 Ga0207711_10001828 Ga0207711_1000182810 329
40 3300032126 Ga0307415_100082623 Ga0307415_1000826232 330
41 3300037853 Ga0436364_0054143 Ga0436364_0054143_2577_3650 335
42 3300044765 Ga0466970_0167852 Ga0466970_0167852_105_1184 335
43 3300045976 Ga0466967_0025220 Ga0466967_0025220_2889_3956 335
44 3300048922 Ga0496119_0001770 Ga0496119_0001770_2155_3240 335
45 3300048923 Ga0496120_0003069 Ga0496120_0003069_570_1655 335
46 3300048924 Ga0496121_0020302 Ga0496121_0020302_1553_2638 335
47 3300048928 Ga0496125_0002281 Ga0496125_0002281_16423_17508 335
48 3300048929 Ga0496126_0013864 Ga0496126_0013864_876_1961 335
49 3300050516 nmdc:mga0sz30_14950_c1 nmdc:mga0sz30_14950_c1_1627_2634 335
50 3300044684 Ga0466966_0080994 Ga0466966_0080994_852_1922 336
51 3300045049 Ga0466959_0073894 Ga0466959_0073894_1315_2385 336
52 3300005336 Ga0070680_100047616 Ga0070680_1000476161 338
53 3300025912 Ga0207707_10145121 Ga0207707_101451211 338
54 3300025917 Ga0207660_10083580 Ga0207660_100835802 338
55 3300025917 Ga0207660_10199266 Ga0207660_101992662 338
56 3300031901 Ga0307406_10074925 Ga0307406_100749251 338
57 3300031903 Ga0307407_10076118 Ga0307407_100761182 338
58 iso_pu_bacteria 2902330777 2902332215 338
59 3300005366 Ga0070659_100084338 Ga0070659_1000843383 339
60 3300048927 Ga0496124_0087192 Ga0496124_0087192_165_1343 339
61 3300009177 Ga0105248_10002138 Ga0105248_100021384 344
62 3300025941 Ga0207711_10000329 Ga0207711_1000032937 344
63 3300048929 Ga0496126_0006693 Ga0496126_0006693_5746_6825 344
64 3300039447 Ga0436361_1200442 Ga0436361_1200442_55_1176 347
65 3300048919 Ga0496116_0000270 Ga0496116_0000270_82545_83759 347
66 3300048920 Ga0496117_0030618 Ga0496117_0030618_2375_3589 347
67 3300048922 Ga0496119_0010052 Ga0496119_0010052_604_1800 347
68 iso_pu_bacteria 2816332119 2816425680 347
69 3300005434 Ga0070709_10110252 Ga0070709_101102522 348
70 3300005435 Ga0070714_100106731 Ga0070714_1001067312 348
71 3300009545 Ga0105237_10039843 Ga0105237_100398433 348
72 3300010375 Ga0105239_10148270 Ga0105239_101482703 348
73 3300025906 Ga0207699_10052906 Ga0207699_100529061 348
74 3300037312 Ga0395899_0010261 Ga0395899_0010261_4591_5691 348
75 3300037418 Ga0395900_0000021 Ga0395900_0000021_97937_99037 348
76 3300037466 Ga0395898_0000846 Ga0395898_0000846_11931_13031 348
77 3300037471 Ga0395905_0001499 Ga0395905_0001499_5443_6543 348
78 3300038443 Ga0395901_0000495 Ga0395901_0000495_34427_35527 348
79 3300039447 Ga0436361_0853529 Ga0436361_0853529_476_1549 348
80 3300044684 Ga0466966_0027510 Ga0466966_0027510_39_1112 348
81 3300044684 Ga0466966_0127155 Ga0466966_0127155_258_1331 348
82 3300044735 Ga0466968_0004163 Ga0466968_0004163_4189_5262 348
83 3300044765 Ga0466970_0164862 Ga0466970_0164862_63_1136 348
84 3300045049 Ga0466959_0001861 Ga0466959_0001861_2734_3807 348
85 3300045836 Ga0466958_0026661 Ga0466958_0026661_2257_3330 348
86 3300047320 Ga0495672_0028458 Ga0495672_0028458_1200_2246 348
87 3300048904 Ga0496101_0305486 Ga0496101_0305486_126_1172 348
88 3300048911 Ga0496108_0021742 Ga0496108_0021742_906_1952 348
89 3300048915 Ga0496112_0001085 Ga0496112_0001085_17174_18220 348
90 3300048916 Ga0496113_0166705 Ga0496113_0166705_143_1189 348
91 3300049570 Ga0501033_0103000 Ga0501033_0103000_13_1086 348
92 3300049571 Ga0501034_0009698 Ga0501034_0009698_3206_4363 348
93 3300049571 Ga0501034_0284736 Ga0501034_0284736_207_1280 348
94 3300049581 Ga0501047_0351218 Ga0501047_0351218_94_1167 348
95 3300049822 Ga0501035_0000257 Ga0501035_0000257_10747_11820 348
96 3300049823 Ga0501044_0000568 Ga0501044_0000568_11242_12315 348
97 3300050490 nmdc:mga03n38_34317_c1 nmdc:mga03n38_34317_c1_387_1433 348
98 3300009101 Ga0105247_10001320 Ga0105247_1000132014 349
99 iso_pu_bacteria 2751185725 2753035717 349
100 iso_pu_bacteria 2751185792 2753326257 349
101 iso_pu_bacteria 2885427238 2885428535 349
102 iso_pu_bacteria 2919395869 2919398850 349
103 3300006844 Ga0075428_100142059 Ga0075428_1001420592 350
104 3300006846 Ga0075430_100002464 Ga0075430_10000246411 350
105 3300006847 Ga0075431_100000366 Ga0075431_10000036611 350
106 3300031731 Ga0307405_10106057 Ga0307405_101060572 350
107 3300046663 Ga0495635_0128550 Ga0495635_0128550_444_1496 350
108 3300050507 nmdc:mga05p37_163378_c1 nmdc:mga05p37_163378_c1_739_1821 350
109 3300050508 nmdc:mga09592_7296_c1 nmdc:mga09592_7296_c1_4346_5428 350
110 3300050509 nmdc:mga0qj67_1091_c1 nmdc:mga0qj67_1091_c1_16573_17655 350
111 3300050510 nmdc:mga06r32_911_c1 nmdc:mga06r32_911_c1_12268_13350 350
112 3300006844 Ga0075428_100029310 Ga0075428_1000293106 351
113 3300006847 Ga0075431_100055138 Ga0075431_1000551382 351
114 3300011119 Ga0105246_10042019 Ga0105246_100420194 351
115 3300048921 Ga0496118_0002342 Ga0496118_0002342_15669_16775 351
116 3300050510 nmdc:mga06r32_30687_c1 nmdc:mga06r32_30687_c1_2428_3558 351
117 3300005548 Ga0070665_100030463 Ga0070665_1000304632 352
118 3300005563 Ga0068855_100003070 Ga0068855_10000307014 352
119 3300009093 Ga0105240_10001533 Ga0105240_1000153310 352
120 3300009545 Ga0105237_10084281 Ga0105237_100842812 352
121 3300010375 Ga0105239_10492823 Ga0105239_104928232 352
122 3300025949 Ga0207667_10019822 Ga0207667_100198224 352
123 3300028379 Ga0268266_10018556 Ga0268266_100185564 352
124 3300028794 Ga0307515_10001182 Ga0307515_1000118243 352
125 3300022467 Ga0224712_10004792 Ga0224712_100047921 353
126 3300025898 Ga0207692_10022456 Ga0207692_100224562 353
127 3300025898 Ga0207692_10038777 Ga0207692_100387773 353
128 3300046463 Ga0495653_0095495 Ga0495653_0095495_987_2120 353
129 3300046559 Ga0495667_0124457 Ga0495667_0124457_460_1593 353
130 iso_pu_bacteria 2894772417 2894777131 353
131 3300005842 Ga0068858_100000326 Ga0068858_1000003263 354
132 3300014968 Ga0157379_10000148 Ga0157379_1000014841 354
133 3300025298 Ga0209050_1000859 Ga0209050_100085932 354
134 3300025900 Ga0207710_10000023 Ga0207710_1000002351 354
135 3300025916 Ga0207663_10241938 Ga0207663_102419382 354
136 3300025918 Ga0207662_10036339 Ga0207662_100363393 354
137 3300026035 Ga0207703_10000021 Ga0207703_10000021213 354
138 3300048907 Ga0496104_0228002 Ga0496104_0228002_121_1356 354
139 3300048924 Ga0496121_0020337 Ga0496121_0020337_3563_4798 354
140 iso_pu_bacteria 2643221569 2643861022 354
141 iso_pu_bacteria 2643221621 2644124328 354
142 iso_pu_bacteria 2643221663 2644353839 354
143 iso_pu_bacteria 2643221687 2644491203 355
144 iso_pu_bacteria 2738541274 2738707405 355
145 iso_pu_bacteria 2939582691 2939585032 355
146 3300005456 Ga0070678_100126257 Ga0070678_1001262572 356
147 3300005546 Ga0070696_100008654 Ga0070696_1000086547 356
148 3300009098 Ga0105245_10066094 Ga0105245_100660942 356
149 3300026067 Ga0207678_10091544 Ga0207678_100915442 356
150 3300026095 Ga0207676_10228246 Ga0207676_102282462 356
151 3300026121 Ga0207683_10125857 Ga0207683_101258572 356
152 3300041451 Ga0451791_0787644 Ga0451791_0787644_170_1309 356
153 3300041452 Ga0451793_0100085 Ga0451793_0100085_1297_2436 356
154 3300041494 Ga0451837_0654817 Ga0451837_0654817_337_1476 356
155 3300041496 Ga0451839_1288043 Ga0451839_1288043_540_1679 356
156 3300041512 Ga0451853_0772154 Ga0451853_0772154_1082_2221 356
157 3300049580 Ga0501046_0170106 Ga0501046_0170106_485_1624 356
158 3300049581 Ga0501047_0011128 Ga0501047_0011128_5431_6570 356
159 iso_pu_bacteria 2738543028 2739328711 356
160 3300005353 Ga0070669_100020939 Ga0070669_1000209394 357
161 3300005367 Ga0070667_100000142 Ga0070667_10000014266 357
162 3300005467 Ga0070706_100003526 Ga0070706_1000035268 357
163 3300005468 Ga0070707_100038026 Ga0070707_1000380264 357
164 3300005471 Ga0070698_100014087 Ga0070698_1000140876 357
165 3300005536 Ga0070697_100001603 Ga0070697_1000016036 357
166 3300005548 Ga0070665_100030032 Ga0070665_1000300323 357
167 3300005617 Ga0068859_100002676 Ga0068859_1000026767 357
168 3300005842 Ga0068858_100159014 Ga0068858_1001590142 357
169 3300005843 Ga0068860_100000209 Ga0068860_10000020997 357
170 3300005844 Ga0068862_100000211 Ga0068862_10000021162 357
171 3300006931 Ga0097620_100002676 Ga0097620_1000026767 357
172 3300009098 Ga0105245_10012433 Ga0105245_100124332 357
173 3300009101 Ga0105247_10000277 Ga0105247_1000027711 357
174 3300009174 Ga0105241_10099381 Ga0105241_100993812 357
175 3300009176 Ga0105242_10007810 Ga0105242_100078105 357
176 3300009177 Ga0105248_10000242 Ga0105248_1000024261 357
177 3300009553 Ga0105249_10000031 Ga0105249_10000031128 357
178 3300014325 Ga0163163_10024583 Ga0163163_100245833 357
179 3300014968 Ga0157379_10040497 Ga0157379_100404972 357
180 3300025900 Ga0207710_10000022 Ga0207710_1000002236 357
181 3300025910 Ga0207684_10013131 Ga0207684_100131316 357
182 3300025922 Ga0207646_10004405 Ga0207646_1000440511 357
183 3300025941 Ga0207711_10001070 Ga0207711_1000107029 357
184 3300025961 Ga0207712_10000029 Ga0207712_10000029129 357
185 3300025986 Ga0207658_10000113 Ga0207658_1000011363 357
186 3300026035 Ga0207703_10108354 Ga0207703_101083542 357
187 3300028379 Ga0268266_10008771 Ga0268266_100087717 357
188 3300028380 Ga0268265_10000040 Ga0268265_1000004062 357
189 3300028381 Ga0268264_10000017 Ga0268264_10000017241 357
190 3300031251 Ga0265327_10000002 Ga0265327_10000002614 357
191 3300046517 Ga0495630_0026309 Ga0495630_0026309_59_1204 357
192 3300046642 Ga0495634_0022732 Ga0495634_0022732_543_1688 357
193 3300046689 Ga0495613_0003096 Ga0495613_0003096_11113_12258 357
194 3300048089 Ga0495614_0014561 Ga0495614_0014561_856_2001 357
195 3300048905 Ga0496102_0000197 Ga0496102_0000197_80009_81082 357
196 3300048906 Ga0496103_0002808 Ga0496103_0002808_1227_2300 357
197 3300048918 Ga0496115_0317441 Ga0496115_0317441_127_1200 357
198 3300048920 Ga0496117_0000160 Ga0496117_0000160_92678_93751 357
199 3300048921 Ga0496118_0000391 Ga0496118_0000391_579_1652 357
200 3300048922 Ga0496119_0016881 Ga0496119_0016881_2739_3812 357
201 3300048924 Ga0496121_0008660 Ga0496121_0008660_8827_9900 357
202 3300048927 Ga0496124_0120647 Ga0496124_0120647_915_1988 357
203 3300049571 Ga0501034_0074704 Ga0501034_0074704_1770_2921 357
204 3300005367 Ga0070667_100001381 Ga0070667_1000013814 358
205 3300005563 Ga0068855_100038816 Ga0068855_1000388163 358
206 3300005614 Ga0068856_100161350 Ga0068856_1001613502 358
207 3300005937 Ga0081455_10051527 Ga0081455_100515275 358
208 3300021388 Ga0213875_10000107 Ga0213875_1000010765 358
209 3300021388 Ga0213875_10048933 Ga0213875_100489331 358
210 3300026078 Ga0207702_10153681 Ga0207702_101536811 358
211 3300037853 Ga0436364_0609479 Ga0436364_0609479_10433_11581 358
212 3300039437 Ga0436365_0532581 Ga0436365_0532581_563_1711 358
213 3300046539 Ga0495621_0012706 Ga0495621_0012706_726_1874 358
214 3300048904 Ga0496101_0264463 Ga0496101_0264463_51_1211 358
215 3300048917 Ga0496114_0086042 Ga0496114_0086042_546_1700 358
216 3300003792 Ga0055540_1001113 Ga0055540_10011137 359
217 3300003792 Ga0055540_1001796 Ga0055540_10017967 359
218 3300005471 Ga0070698_100163905 Ga0070698_1001639051 359
219 3300006051 Ga0075364_10041424 Ga0075364_100414242 359
220 3300009177 Ga0105248_10001448 Ga0105248_1000144810 359
221 3300025303 Ga0209051_1001272 Ga0209051_100127212 359
222 3300025303 Ga0209051_1003693 Ga0209051_10036938 359
223 3300050516 nmdc:mga0sz30_42816_c1 nmdc:mga0sz30_42816_c1_324_1403 359

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

36

386

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g04-assembly2.cif.gz_D crystal structure of fatty acid-coa racemase from mycobacterium tuberculosis h37rv 0.9882 4 359
2g04-assembly2.cif.gz_D crystal structure of fatty acid-coa racemase from mycobacterium tuberculosis h37rv 0.9827 4 359
2yim-assembly2.cif.gz_C the enolisation chemistry of a thioester-dependent racemase: the 1.4 a crystal structure of a complex with a planar reaction intermediate analogue 0.9744 3 352
2gd0-assembly1.cif.gz_A the 1,1-proton transfer reaction mechanism by alpha-methylacyl-coa racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety 0.9614 3 359
2gd0-assembly1.cif.gz_A the 1,1-proton transfer reaction mechanism by alpha-methylacyl-coa racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety 0.9588 3 359
ID Description Score Start End Superfamily
1x74A04 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9889 219 303 3.30.1540.10
2g04A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9809 4 359 3.40.50.10540
2g04A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9736 4 359 3.40.50.10540
af_O06543_1_217_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9713 3 214 3.40.50.10540
af_Q9VIK0_212_295_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9665 220 304 3.30.1540.10
ID Description Score Start End GO Terms
AF-A0A109SVH9-F1-model_v4 deleted 0.9926 9 359
AF-A0A109SVH9-F1-model_v4 deleted 0.9898 9 359
AF-A0A3D3T3A1-F1-model_v4 Carnitine dehydratase 0.9863 113 202 GO:0003824
GO:0016020
AF-A0A529VSP7-F1-model_v4 CoA transferase 0.9849 75 211 GO:0016740
AF-A0A558ALR3-F1-model_v4 CoA transferase 0.9799 3 315 GO:0016740

Feature Viewer

pLDDT pTM Quality
93.15 0.9 High
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Predicted Structure (AlphaFold2)

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