F334515

General Info

Members Datasets Scaffolds Average Seq Length
222 159 201 250

Family's Representative Sequence

Representative Sequence 3300025294|Ga0209025_1090949|Ga0209025_10909491
Length 243
Sequence MNFGIDGKTALVFGAGGGLGGAIARSLAQEGARVVAADINLELAWDLADLASIDAHVAGIEARHGGIDILVNNTGGPPPTPAAGQDPALWEGSFRAMVLSVIAITDRVLPGMRARRWGRIVTSASSGVVAPIPNLGVSNALRASLVGWSKTLAREVARDGVTCNVVVPGRIATKRITFLDEQKAKREGRSAEEVSAESTSTIPAGRYGDPQEYADVVAFLASAKASYVTGSIVRVDGGLIQSI

Samples

Sample ID Description Type Environment
1 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
2 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
3 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
4 2643221618 Ensifer sp. Root231 Isolate Unclassified
5 2643221655 Ensifer sp. Root1252 Isolate Unclassified
6 2643221712 Ensifer sp. Root258 Isolate Unclassified
7 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
8 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
9 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
10 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
11 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
12 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
13 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
14 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
15 2941479691
16 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
17 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
18 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
19 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
20 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
21 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
47 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
55 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
75 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
76 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
77 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
78 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
79 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
80 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
108 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
116 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
159 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.09
Metatranscriptomes 0.45
Isolates 9.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.95
Nodule 5.86
Rhizoplane 0.45
Rhizosphere 72.97
Stem 0
Stem Tuber 0
Unclassified 15.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10245168 3300003323 Bacteria 2332
2 Ga0065165_1000014 3300005262 Bacteria 292366
3 Ga0065165_1000384 3300005262 Bacteria 71731
4 Ga0070680_100006362 3300005336 Bacteria 8970
5 Ga0070680_100190640 3300005336 Unclassified 1727
6 Ga0070675_100049180 3300005354 Bacteria 3460
7 Ga0070714_100056719 3300005435 Bacteria 3351
8 Ga0070713_100499123 3300005436 Bacteria 1148
9 Ga0070705_100433066 3300005440 Bacteria 982
10 Ga0070681_10034463 3300005458 Bacteria 5083
11 Ga0070681_10064724 3300005458 Bacteria 3626
12 Ga0070679_100002730 3300005530 Bacteria 16079
13 Ga0070679_100011087 3300005530 Bacteria 8577
14 Ga0070684_100092488 3300005535 Bacteria 2691
15 Ga0070665_100002395 3300005548 Bacteria 20684
16 Ga0070665_100058723 3300005548 Bacteria 3856
17 Ga0070665_100584418 3300005548 Bacteria 1130
18 Ga0068855_100003176 3300005563 Bacteria 20113
19 Ga0068855_100254909 3300005563 Bacteria 1956
20 Ga0070664_100226781 3300005564 Bacteria 1673
21 Ga0068854_100122045 3300005578 Bacteria 1980
22 Ga0068856_100018630 3300005614 Bacteria 6727
23 Ga0068864_100618767 3300005618 Bacteria 1052
24 Ga0075365_10032401 3300006038 Bacteria 3359
25 Ga0075370_10121521 3300006353 Bacteria 1521
26 Ga0075434_100095054 3300006871 Unclassified 2986
27 Ga0075435_100026263 3300007076 Bacteria 4541
28 Ga0105240_10003696 3300009093 Bacteria 23644
29 Ga0105240_10256286 3300009093 Bacteria 2020
30 Ga0105248_10031511 3300009177 Bacteria 5926
31 Ga0105248_10032998 3300009177 Bacteria 5783
32 Ga0105237_10007655 3300009545 Bacteria 11807
33 Ga0105237_10108991 3300009545 Bacteria 2760
34 Ga0105238_10439988 3300009551 Bacteria 1300
35 Ga0123341_1000003 3300009765 Bacteria 172237
36 Ga0123342_1042601 3300009766 Bacteria 1595
37 Ga0105239_10009738 3300010375 Bacteria 10802
38 Ga0105239_10842997 3300010375 Bacteria 1051
39 Ga0157373_10000499 3300013100 Bacteria 30965
40 Ga0157369_10022228 3300013105 Bacteria 7083
41 Ga0171462_1050 3300013250 Bacteria 40440
42 Ga0157372_10432039 3300013307 Bacteria 1535
43 Ga0206353_11511208 3300020082 Bacteria 1945
44 Ga0228711_1010044 3300022739 Bacteria 12584
45 Ga0228710_1010269 3300022740 Bacteria 12585
46 Ga0209130_1000024 3300025284 Bacteria 354212
47 Ga0209025_1090949 3300025294 Bacteria 998
48 Ga0207707_10021599 3300025912 Bacteria 5624
49 Ga0207695_10022794 3300025913 Bacteria 7094
50 Ga0207695_10147798 3300025913 Bacteria 2292
51 Ga0207671_10198505 3300025914 Bacteria 1566
52 Ga0207671_10413620 3300025914 Bacteria 1073
53 Ga0207652_10008170 3300025921 Bacteria 8404
54 Ga0207652_10353505 3300025921 Bacteria 1326
55 Ga0207659_10463600 3300025926 Bacteria 1069
56 Ga0207664_10008048 3300025929 Bacteria 7329
57 Ga0207711_10138382 3300025941 Bacteria 2189
58 Ga0207711_10155828 3300025941 Bacteria 2064
59 Ga0207661_10282584 3300025944 Bacteria 1483
60 Ga0207679_10141991 3300025945 Bacteria 1942
61 Ga0207667_10021530 3300025949 Bacteria 7143
62 Ga0207667_10060954 3300025949 Bacteria 3948
63 Ga0207667_10212434 3300025949 Bacteria 1983
64 Ga0209371_1000425 3300027312 Bacteria 43402
65 Ga0268266_10000591 3300028379 Bacteria 50003
66 Ga0268266_10000848 3300028379 Bacteria 39835
67 Ga0268266_10012019 3300028379 Bacteria 7492
68 Ga0268266_10095874 3300028379 Bacteria 2606
69 Ga0265319_1008597 3300028563 Bacteria 4452
70 Ga0265334_10000148 3300028573 Bacteria 43717
71 Ga0265318_10011765 3300028577 Bacteria 3749
72 Ga0265338_10013995 3300028800 Bacteria 8988
73 Ga0265338_10069197 3300028800 Bacteria 3034
74 Ga0265338_10152853 3300028800 Bacteria 1791
75 Ga0268256_1001004 3300030500 Bacteria 19148
76 Ga0265330_10000338 3300031235 Bacteria 33586
77 Ga0265330_10003931 3300031235 Bacteria 7637
78 Ga0265332_10013329 3300031238 Bacteria 3644
79 Ga0265332_10016275 3300031238 Bacteria 3281
80 Ga0265328_10026120 3300031239 Bacteria 2197
81 Ga0265320_10013670 3300031240 Bacteria 4655
82 Ga0265320_10026301 3300031240 Bacteria 3048
83 Ga0265325_10002006 3300031241 Bacteria 13980
84 Ga0265325_10007424 3300031241 Bacteria 6563
85 Ga0265329_10004240 3300031242 Bacteria 6023
86 Ga0265339_10007362 3300031249 Bacteria 7122
87 Ga0265331_10006906 3300031250 Bacteria 6629
88 Ga0265316_10000713 3300031344 Bacteria 36680
89 Ga0265316_10020350 3300031344 Bacteria 5650
90 Ga0265313_10002720 3300031595 Bacteria 14969
91 Ga0265313_10013423 3300031595 Bacteria 4918
92 Ga0265314_10014215 3300031711 Bacteria 6383
93 Ga0265342_10002878 3300031712 Bacteria 14506
94 Ga0265342_10007081 3300031712 Bacteria 8264
95 Ga0307412_10002881 3300031911 Bacteria 9533
96 Ga0307414_10002834 3300032004 Bacteria 9142
97 Ga0307510_10017847 3300033180 Bacteria 8360
98 Ga0395899_0013792 3300037312 Bacteria 6177
99 Ga0395899_0170044 3300037312 Bacteria 1535
100 Ga0395900_0147375 3300037418 Bacteria 2406
101 Ga0395898_0021064 3300037466 Bacteria 6614
102 Ga0395901_0013430 3300038443 Bacteria 8325
103 Ga0395901_0313637 3300038443 Bacteria 1624
104 Ga0436361_0568736 3300039447 Bacteria 2966
105 Ga0436361_1076163 3300039447 Bacteria 1073
106 Ga0451576_0134042 3300045051 Unclassified 2582
107 Ga0495629_0000383 3300046459 Bacteria 37058
108 Ga0495638_0005562 3300046460 Bacteria 9317
109 Ga0495653_0000356 3300046463 Bacteria 36997
110 Ga0495650_0035376 3300046471 Bacteria 2199
111 Ga0495580_0003542 3300046472 Bacteria 13262
112 Ga0495606_0002392 3300046507 Bacteria 21966
113 Ga0495628_0006019 3300046516 Bacteria 10607
114 Ga0495648_0000086 3300046524 Bacteria 118069
115 Ga0495648_0001384 3300046524 Bacteria 23881
116 Ga0495665_0041404 3300046531 Bacteria 2452
117 Ga0495645_0054920 3300046543 Bacteria 2893
118 Ga0495645_0139683 3300046543 Bacteria 1691
119 Ga0495625_0001382 3300046660 Bacteria 29819
120 Ga0495659_0119334 3300046664 Unclassified 1037
121 Ga0495646_0023273 3300046680 Bacteria 3901
122 Ga0495613_0059342 3300046689 Bacteria 2805
123 Ga0495624_0000336 3300046690 Bacteria 37181
124 Ga0495649_0009588 3300046694 Bacteria 5741
125 Ga0495674_0003331 3300047319 Bacteria 15604
126 Ga0495672_0005724 3300047320 Bacteria 9784
127 Ga0495672_0011818 3300047320 Bacteria 6133
128 Ga0495672_0041322 3300047320 Bacteria 2790
129 Ga0495672_0091492 3300047320 Bacteria 1670
130 Ga0495676_0095923 3300047321 Bacteria 2206
131 Ga0495683_0000291 3300047323 Bacteria 43274
132 Ga0495687_035835 3300047443 Unclassified 2226
133 Ga0495593_0000252 3300047673 Bacteria 28990
134 Ga0496116_0002160 3300048919 Bacteria 20948
135 Ga0496117_0047973 3300048920 Bacteria 3056
136 Ga0496117_0132898 3300048920 Bacteria 1505
137 Ga0496118_0056494 3300048921 Bacteria 2950
138 Ga0496119_0199772 3300048922 Bacteria 1035
139 Ga0496120_0025954 3300048923 Bacteria 3628
140 Ga0496121_0000508 3300048924 Bacteria 74420
141 Ga0496121_0210196 3300048924 Bacteria 1379
142 Ga0496121_0321561 3300048924 Bacteria 1041
143 Ga0496122_0000214 3300048925 Bacteria 129132
144 Ga0496122_0002014 3300048925 Bacteria 30216
145 Ga0496122_0050385 3300048925 Bacteria 3176
146 Ga0496122_0075500 3300048925 Bacteria 2377
147 Ga0496123_0000289 3300048926 Bacteria 98253
148 Ga0496123_0000678 3300048926 Bacteria 56270
149 Ga0496123_0018413 3300048926 Bacteria 5559
150 Ga0496123_0106777 3300048926 Bacteria 1612
151 Ga0496124_0017130 3300048927 Bacteria 6848
152 Ga0496124_0075048 3300048927 Bacteria 2794
153 Ga0496125_0002637 3300048928 Bacteria 22956
154 Ga0496125_0053684 3300048928 Bacteria 3301
155 Ga0496125_0065112 3300048928 Bacteria 2890
156 Ga0496126_0037600 3300048929 Bacteria 4515
157 Ga0496126_0082273 3300048929 Bacteria 2845
158 Ga0496126_0145381 3300048929 Bacteria 2037
159 Ga0501031_0002561 3300049568 Bacteria 11583
160 Ga0501032_0004619 3300049569 Bacteria 10359
161 Ga0501032_0090324 3300049569 Bacteria 2033
162 Ga0501033_0011071 3300049570 Bacteria 6907
163 Ga0501033_0048016 3300049570 Bacteria 3172
164 Ga0501034_0003055 3300049571 Bacteria 19328
165 Ga0501034_0141589 3300049571 Bacteria 2384
166 Ga0501034_0317397 3300049571 Bacteria 1491
167 Ga0501036_0001315 3300049572 Bacteria 19056
168 Ga0501036_0059609 3300049572 Bacteria 3234
169 Ga0501037_0010802 3300049573 Bacteria 6711
170 Ga0501038_0002280 3300049574 Bacteria 17849
171 Ga0501038_0059734 3300049574 Bacteria 3265
172 Ga0501039_0002927 3300049575 Bacteria 12775
173 Ga0501040_0000697 3300049576 Bacteria 20746
174 Ga0501041_0089986 3300049577 Bacteria 1895
175 Ga0501042_0000118 3300049578 Bacteria 33749
176 Ga0501042_0041260 3300049578 Bacteria 3281
177 Ga0501042_0066342 3300049578 Bacteria 2579
178 Ga0501043_0007149 3300049579 Bacteria 8880
179 Ga0501046_0002355 3300049580 Bacteria 17801
180 Ga0501047_0007345 3300049581 Bacteria 10359
181 Ga0501048_0001333 3300049582 Bacteria 18714
182 Ga0501067_0083203 3300049583 Bacteria 1775
183 Ga0501068_0001765 3300049584 Bacteria 11496
184 Ga0501069_0011169 3300049585 Bacteria 4766
185 Ga0501070_0001529 3300049586 Bacteria 20585
186 Ga0501070_0102918 3300049586 Bacteria 2362
187 Ga0501070_0258286 3300049586 Bacteria 1424
188 Ga0501071_0020771 3300049587 Bacteria 4566
189 Ga0501073_0027211 3300049589 Bacteria 4093
190 Ga0501080_0002779 3300049742 Bacteria 15373
191 Ga0501083_0120307 3300049744 Bacteria 1722
192 Ga0501035_0008065 3300049822 Bacteria 9818
193 Ga0501035_0285380 3300049822 Bacteria 1394
194 Ga0501044_0000260 3300049823 Bacteria 67087
195 Ga0501044_0126502 3300049823 Bacteria 2553
196 Ga0501045_0003550 3300049824 Bacteria 10707
197 nmdc:mga00v17_26284_c1 3300050491 Bacteria 3391
198 nmdc:mga07m45_357656_c1 3300050496 Bacteria 848
199 nmdc:mga0sz30_65088_c1 3300050516 Bacteria 1563
200 Ga0500595_015562 3300053119 Bacteria 2853
201 Ga0500588_0034816 3300053146 Bacteria 1477

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025949 Ga0207667_10021530 Ga0207667_100215305 222
2 3300048924 Ga0496121_0321561 Ga0496121_0321561_117_902 223
3 3300033180 Ga0307510_10017847 Ga0307510_100178473 224
4 3300013307 Ga0157372_10432039 Ga0157372_104320392 229
5 3300049568 Ga0501031_0002561 Ga0501031_0002561_7631_8422 229
6 3300049569 Ga0501032_0004619 Ga0501032_0004619_1938_2729 229
7 3300049570 Ga0501033_0011071 Ga0501033_0011071_2134_2925 229
8 3300049571 Ga0501034_0003055 Ga0501034_0003055_16600_17391 229
9 3300049572 Ga0501036_0001315 Ga0501036_0001315_1938_2729 229
10 3300049573 Ga0501037_0010802 Ga0501037_0010802_1938_2729 229
11 3300049574 Ga0501038_0002280 Ga0501038_0002280_16600_17391 229
12 3300049575 Ga0501039_0002927 Ga0501039_0002927_177_968 229
13 3300049577 Ga0501041_0089986 Ga0501041_0089986_373_1164 229
14 3300049578 Ga0501042_0066342 Ga0501042_0066342_293_1084 229
15 3300049579 Ga0501043_0007149 Ga0501043_0007149_7631_8422 229
16 3300049580 Ga0501046_0002355 Ga0501046_0002355_14180_14971 229
17 3300049581 Ga0501047_0007345 Ga0501047_0007345_1938_2729 229
18 3300049582 Ga0501048_0001333 Ga0501048_0001333_2058_2849 229
19 3300049583 Ga0501067_0083203 Ga0501067_0083203_85_876 229
20 3300049584 Ga0501068_0001765 Ga0501068_0001765_2753_3544 229
21 3300049585 Ga0501069_0011169 Ga0501069_0011169_1961_2752 229
22 3300049586 Ga0501070_0001529 Ga0501070_0001529_2699_3490 229
23 3300049587 Ga0501071_0020771 Ga0501071_0020771_247_1038 229
24 3300049589 Ga0501073_0027211 Ga0501073_0027211_605_1396 229
25 3300049742 Ga0501080_0002779 Ga0501080_0002779_2753_3544 229
26 3300049744 Ga0501083_0120307 Ga0501083_0120307_247_1038 229
27 3300049822 Ga0501035_0008065 Ga0501035_0008065_1938_2729 229
28 3300049824 Ga0501045_0003550 Ga0501045_0003550_7631_8422 229
29 3300022739 Ga0228711_1010044 Ga0228711_10100444 230
30 3300022740 Ga0228710_1010269 Ga0228710_101026914 230
31 3300048924 Ga0496121_0210196 Ga0496121_0210196_437_1222 230
32 3300005563 Ga0068855_100254909 Ga0068855_1002549093 232
33 3300025294 Ga0209025_1090949 Ga0209025_10909491 232
34 3300025949 Ga0207667_10212434 Ga0207667_102124342 232
35 3300048925 Ga0496122_0000214 Ga0496122_0000214_65332_66117 232
36 3300048926 Ga0496123_0000289 Ga0496123_0000289_32137_32922 232
37 3300048928 Ga0496125_0053684 Ga0496125_0053684_200_985 232
38 3300048929 Ga0496126_0082273 Ga0496126_0082273_1912_2697 233
39 3300048925 Ga0496122_0002014 Ga0496122_0002014_27585_28496 235
40 3300048926 Ga0496123_0000678 Ga0496123_0000678_31023_31934 235
41 3300006038 Ga0075365_10032401 Ga0075365_100324013 236
42 3300006353 Ga0075370_10121521 Ga0075370_101215212 236
43 3300048919 Ga0496116_0002160 Ga0496116_0002160_8440_9225 236
44 3300048920 Ga0496117_0047973 Ga0496117_0047973_941_1726 236
45 3300048921 Ga0496118_0056494 Ga0496118_0056494_1296_2081 236
46 3300048925 Ga0496122_0075500 Ga0496122_0075500_203_988 236
47 3300048926 Ga0496123_0018413 Ga0496123_0018413_1434_2219 236
48 3300048927 Ga0496124_0075048 Ga0496124_0075048_1258_2043 236
49 3300048928 Ga0496125_0065112 Ga0496125_0065112_1188_1973 236
50 3300050491 nmdc:mga00v17_26284_c1 nmdc:mga00v17_26284_c1_1624_2409 236
51 3300050516 nmdc:mga0sz30_65088_c1 nmdc:mga0sz30_65088_c1_195_980 236
52 3300046507 Ga0495606_0002392 Ga0495606_0002392_2826_3611 237
53 3300047443 Ga0495687_035835 Ga0495687_035835_30_815 237
54 3300028800 Ga0265338_10152853 Ga0265338_101528532 238
55 3300046459 Ga0495629_0000383 Ga0495629_0000383_32400_33185 238
56 3300046463 Ga0495653_0000356 Ga0495653_0000356_32351_33136 238
57 3300046472 Ga0495580_0003542 Ga0495580_0003542_1865_2650 238
58 3300046516 Ga0495628_0006019 Ga0495628_0006019_8100_8885 238
59 3300046524 Ga0495648_0001384 Ga0495648_0001384_21320_22105 238
60 3300046531 Ga0495665_0041404 Ga0495665_0041404_1360_2145 238
61 3300046680 Ga0495646_0023273 Ga0495646_0023273_1063_1848 238
62 3300046689 Ga0495613_0059342 Ga0495613_0059342_1061_1846 238
63 3300046690 Ga0495624_0000336 Ga0495624_0000336_32400_33185 238
64 3300047319 Ga0495674_0003331 Ga0495674_0003331_10740_11525 238
65 3300047321 Ga0495676_0095923 Ga0495676_0095923_1324_2109 238
66 3300047673 Ga0495593_0000252 Ga0495593_0000252_3460_4245 238
67 3300050496 nmdc:mga07m45_357656_c1 nmdc:mga07m45_357656_c1_52_837 238
68 3300005548 Ga0070665_100002395 Ga0070665_1000023956 239
69 3300005548 Ga0070665_100584418 Ga0070665_1005844181 239
70 3300028379 Ga0268266_10000591 Ga0268266_1000059137 239
71 3300028379 Ga0268266_10000848 Ga0268266_100008489 239
72 3300046543 Ga0495645_0054920 Ga0495645_0054920_845_1630 239
73 3300046660 Ga0495625_0001382 Ga0495625_0001382_21413_22198 239
74 3300046664 Ga0495659_0119334 Ga0495659_0119334_63_815 239
75 3300048927 Ga0496124_0017130 Ga0496124_0017130_4537_5322 239
76 3300049569 Ga0501032_0090324 Ga0501032_0090324_533_1318 239
77 3300049570 Ga0501033_0048016 Ga0501033_0048016_2033_2818 239
78 iso_pu_bacteria 2968117919 2968119441 239
79 3300005262 Ga0065165_1000384 Ga0065165_100038432 240
80 3300005436 Ga0070713_100499123 Ga0070713_1004991232 240
81 3300028563 Ga0265319_1008597 Ga0265319_10085971 241
82 3300028573 Ga0265334_10000148 Ga0265334_1000014834 241
83 3300028577 Ga0265318_10011765 Ga0265318_100117653 241
84 3300028800 Ga0265338_10069197 Ga0265338_100691973 241
85 3300031235 Ga0265330_10003931 Ga0265330_100039317 241
86 3300031238 Ga0265332_10013329 Ga0265332_100133292 241
87 3300031240 Ga0265320_10013670 Ga0265320_100136703 241
88 3300031241 Ga0265325_10007424 Ga0265325_100074242 241
89 3300031242 Ga0265329_10004240 Ga0265329_100042405 241
90 3300031250 Ga0265331_10006906 Ga0265331_100069064 241
91 3300031344 Ga0265316_10020350 Ga0265316_100203503 241
92 3300031595 Ga0265313_10013423 Ga0265313_100134232 241
93 3300031711 Ga0265314_10014215 Ga0265314_100142155 241
94 3300031712 Ga0265342_10007081 Ga0265342_100070814 241
95 3300009765 Ga0123341_1000003 Ga0123341_1000003111 243
96 3300009766 Ga0123342_1042601 Ga0123342_10426012 243
97 3300047320 Ga0495672_0041322 Ga0495672_0041322_1116_1901 243
98 3300048923 Ga0496120_0025954 Ga0496120_0025954_2286_3071 243
99 3300039447 Ga0436361_1076163 Ga0436361_1076163_94_879 244
100 3300047320 Ga0495672_0005724 Ga0495672_0005724_3957_4742 245
101 3300047320 Ga0495672_0091492 Ga0495672_0091492_495_1280 245
102 3300005354 Ga0070675_100049180 Ga0070675_1000491801 246
103 3300005564 Ga0070664_100226781 Ga0070664_1002267812 246
104 3300005618 Ga0068864_100618767 Ga0068864_1006187672 246
105 3300025926 Ga0207659_10463600 Ga0207659_104636002 246
106 3300025945 Ga0207679_10141991 Ga0207679_101419912 246
107 3300028800 Ga0265338_10013995 Ga0265338_100139957 246
108 3300031235 Ga0265330_10000338 Ga0265330_1000033824 246
109 3300031238 Ga0265332_10016275 Ga0265332_100162752 246
110 3300031239 Ga0265328_10026120 Ga0265328_100261202 246
111 3300031240 Ga0265320_10026301 Ga0265320_100263012 246
112 3300031241 Ga0265325_10002006 Ga0265325_1000200610 246
113 3300031249 Ga0265339_10007362 Ga0265339_100073624 246
114 3300031344 Ga0265316_10000713 Ga0265316_100007136 246
115 3300031595 Ga0265313_10002720 Ga0265313_1000272010 246
116 3300031712 Ga0265342_10002878 Ga0265342_100028789 246
117 iso_pu_bacteria 2517487022 2517567903 246
118 iso_pu_bacteria 2582581294 2585202658 246
119 iso_pu_bacteria 2599185292 2599903530 246
120 iso_pu_bacteria 2643221618 2644104982 246
121 iso_pu_bacteria 2643221655 2644307525 246
122 iso_pu_bacteria 2643221712 2644613611 246
123 iso_pu_bacteria 2738541281 2738747432 246
124 iso_pu_bacteria 2738543032 2739356714 246
125 iso_pu_bacteria 2802428861 2802740872 246
126 iso_pu_bacteria 2802428863 2802751977 246
127 iso_pu_bacteria 2828305725 2828310308 246
128 iso_pu_bacteria 2895511927 2895515224 246
129 iso_pu_bacteria 2904449895 2904449897 246
130 iso_pu_bacteria 2937036028 2937039300 246
131 iso_pu_bacteria 2941479691 2941484590 246
132 iso_pu_bacteria 2957437181 2957437953 246
133 iso_pu_bacteria 2960591022 2960591545 246
134 iso_pu_bacteria 2960631154 2960632286 246
135 iso_pu_bacteria 2967728569 2967731444 246
136 iso_pu_bacteria 2977530762 2977536578 246
137 3300005440 Ga0070705_100433066 Ga0070705_1004330661 247
138 3300006871 Ga0075434_100095054 Ga0075434_1000950543 247
139 3300007076 Ga0075435_100026263 Ga0075435_1000262632 247
140 3300045051 Ga0451576_0134042 Ga0451576_0134042_1669_2454 247
141 3300005435 Ga0070714_100056719 Ga0070714_1000567192 248
142 3300005578 Ga0068854_100122045 Ga0068854_1001220452 248
143 3300009093 Ga0105240_10003696 Ga0105240_1000369619 248
144 3300013250 Ga0171462_1050 Ga0171462_105032 248
145 3300025929 Ga0207664_10008048 Ga0207664_100080483 248
146 3300046471 Ga0495650_0035376 Ga0495650_0035376_126_935 248
147 3300046694 Ga0495649_0009588 Ga0495649_0009588_3934_4719 248
148 3300053146 Ga0500588_0034816 Ga0500588_0034816_352_1137 248
149 3300005458 Ga0070681_10034463 Ga0070681_100344635 249
150 3300005530 Ga0070679_100002730 Ga0070679_1000027302 249
151 3300005535 Ga0070684_100092488 Ga0070684_1000924883 249
152 3300009093 Ga0105240_10256286 Ga0105240_102562862 249
153 3300009545 Ga0105237_10007655 Ga0105237_100076554 249
154 3300010375 Ga0105239_10009738 Ga0105239_100097388 249
155 3300010375 Ga0105239_10842997 Ga0105239_108429971 249
156 3300013105 Ga0157369_10022228 Ga0157369_100222282 249
157 3300025913 Ga0207695_10147798 Ga0207695_101477983 249
158 3300025914 Ga0207671_10413620 Ga0207671_104136202 249
159 3300025921 Ga0207652_10353505 Ga0207652_103535051 249
160 3300025944 Ga0207661_10282584 Ga0207661_102825842 249
161 3300025949 Ga0207667_10060954 Ga0207667_100609542 249
162 3300028379 Ga0268266_10095874 Ga0268266_100958742 249
163 3300003323 rootH1_10245168 rootH1_102451682 250
164 3300005262 Ga0065165_1000014 Ga0065165_1000014187 250
165 3300005336 Ga0070680_100006362 Ga0070680_1000063623 250
166 3300005336 Ga0070680_100190640 Ga0070680_1001906402 250
167 3300005458 Ga0070681_10064724 Ga0070681_100647242 250
168 3300005530 Ga0070679_100011087 Ga0070679_1000110873 250
169 3300005548 Ga0070665_100058723 Ga0070665_1000587233 250
170 3300005563 Ga0068855_100003176 Ga0068855_1000031766 250
171 3300005614 Ga0068856_100018630 Ga0068856_1000186305 250
172 3300009177 Ga0105248_10031511 Ga0105248_100315112 250
173 3300009177 Ga0105248_10032998 Ga0105248_100329983 250
174 3300009545 Ga0105237_10108991 Ga0105237_101089913 250
175 3300009551 Ga0105238_10439988 Ga0105238_104399882 250
176 3300013100 Ga0157373_10000499 Ga0157373_1000049910 250
177 3300020082 Ga0206353_11511208 Ga0206353_115112082 250
178 3300025284 Ga0209130_1000024 Ga0209130_100002487 250
179 3300025912 Ga0207707_10021599 Ga0207707_100215993 250
180 3300025913 Ga0207695_10022794 Ga0207695_100227946 250
181 3300025914 Ga0207671_10198505 Ga0207671_101985052 250
182 3300025921 Ga0207652_10008170 Ga0207652_100081707 250
183 3300025941 Ga0207711_10138382 Ga0207711_101383822 250
184 3300025941 Ga0207711_10155828 Ga0207711_101558282 250
185 3300027312 Ga0209371_1000425 Ga0209371_100042537 250
186 3300028379 Ga0268266_10012019 Ga0268266_100120197 250
187 3300030500 Ga0268256_1001004 Ga0268256_100100411 250
188 3300031911 Ga0307412_10002881 Ga0307412_100028815 250
189 3300032004 Ga0307414_10002834 Ga0307414_100028345 250
190 3300037312 Ga0395899_0013792 Ga0395899_0013792_4221_5006 250
191 3300037312 Ga0395899_0170044 Ga0395899_0170044_641_1426 250
192 3300037418 Ga0395900_0147375 Ga0395900_0147375_898_1683 250
193 3300037466 Ga0395898_0021064 Ga0395898_0021064_172_957 250
194 3300038443 Ga0395901_0013430 Ga0395901_0013430_2962_3747 250
195 3300038443 Ga0395901_0313637 Ga0395901_0313637_804_1589 250
196 3300039447 Ga0436361_0568736 Ga0436361_0568736_1252_2037 250
197 3300046460 Ga0495638_0005562 Ga0495638_0005562_6117_6902 250
198 3300046524 Ga0495648_0000086 Ga0495648_0000086_98086_98871 250
199 3300046543 Ga0495645_0139683 Ga0495645_0139683_43_828 250
200 3300047320 Ga0495672_0011818 Ga0495672_0011818_3273_4058 250
201 3300047323 Ga0495683_0000291 Ga0495683_0000291_22103_22888 250
202 3300048920 Ga0496117_0132898 Ga0496117_0132898_414_1199 250
203 3300048922 Ga0496119_0199772 Ga0496119_0199772_98_898 250
204 3300048924 Ga0496121_0000508 Ga0496121_0000508_21497_22282 250
205 3300048925 Ga0496122_0050385 Ga0496122_0050385_311_1111 250
206 3300048926 Ga0496123_0106777 Ga0496123_0106777_677_1477 250
207 3300048928 Ga0496125_0002637 Ga0496125_0002637_808_1605 250
208 3300048929 Ga0496126_0037600 Ga0496126_0037600_1590_2375 250
209 3300048929 Ga0496126_0145381 Ga0496126_0145381_461_1246 250
210 3300049571 Ga0501034_0141589 Ga0501034_0141589_167_952 250
211 3300049571 Ga0501034_0317397 Ga0501034_0317397_23_808 250
212 3300049572 Ga0501036_0059609 Ga0501036_0059609_2335_3120 250
213 3300049574 Ga0501038_0059734 Ga0501038_0059734_2013_2798 250
214 3300049576 Ga0501040_0000697 Ga0501040_0000697_270_1055 250
215 3300049578 Ga0501042_0000118 Ga0501042_0000118_17344_18129 250
216 3300049578 Ga0501042_0041260 Ga0501042_0041260_694_1479 250
217 3300049586 Ga0501070_0102918 Ga0501070_0102918_876_1661 250
218 3300049586 Ga0501070_0258286 Ga0501070_0258286_250_1035 250
219 3300049822 Ga0501035_0285380 Ga0501035_0285380_313_1098 250
220 3300049823 Ga0501044_0000260 Ga0501044_0000260_36854_37639 250
221 3300049823 Ga0501044_0126502 Ga0501044_0126502_946_1731 250
222 3300053119 Ga0500595_015562 Ga0500595_015562_1067_1852 250

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

41

184

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

14

240

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g9v-assembly2.cif.gz_D crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9271 4 176
6zzq-assembly1.cif.gz_A crystal structure of (r)-3-hydroxybutyrate dehydrogenase from acinetobacter baumannii complexed with nad+ and acetoacetate 0.9265 5 244
8g9v-assembly1.cif.gz_B crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9255 4 180
3ucx-assembly1.cif.gz_A the structure of a short chain dehydrogenase from mycobacterium smegmatis 0.9254 5 245
3ai3-assembly1.cif.gz_G the crystal structure of l-sorbose reductase from gluconobacter frateurii complexed with nadph and l-sorbose 0.9251 1 250
ID Description Score Start End Superfamily
3ucxA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9254 5 245 3.40.50.720
3ai1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.924 1 250 3.40.50.720
af_Q5M875_26_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9228 4 180 3.40.50.720
3ai1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9205 1 250 3.40.50.720
af_Q9VKB8_43_310_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9205 5 179 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A5C7UPL6-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.977 1 182
AF-D5RQZ8-F1-model_v4 Oxidoreductase, short chain dehydrogenase/reductase family protein (EC 1.1.1.100) 0.962 1 250 GO:0004316
AF-J7L7K4-F1-model_v4 Short chain dehydrogenase family protein 0.959 1 249
AF-D5RQZ8-F1-model_v4 Oxidoreductase, short chain dehydrogenase/reductase family protein (EC 1.1.1.100) 0.9583 1 250 GO:0004316
AF-A0A832MWN0-F1-model_v4 SDR family oxidoreductase 0.9577 1 244

Feature Viewer

pLDDT pTM Quality
88.98 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map