F334269

General Info

Members Datasets Scaffolds Average Seq Length
222 148 444 470

Family's Representative Sequence

Representative Sequence 3300005549|Ga0070704_100056555|Ga0070704_1000565552
Length 500
Sequence MEDGGSRFSITVFPSSILHPSSSIYPTMKRVIIIGGGIAGLAAAHRIVELSKEQSLELDVLLLEDSHRLGGSIATERIGDFLIEAGPDSFISEKPWALRLCERLGLTPRLISTQAAYQKIYIVHCGKLEALPEGFFLLAPTRFWPFVQTPLFSWRGKLRMAGELFLPRAQANHNDESLGSFVRRRFGREALERVAQPLVGGIYAADPEQLSLAATMPRFLEMERNQRSVIRSMWSDQRRRARRREGGSGARWSLFVTLAGGMQELVDAVAGRLPENSIRYNAPASALNQNPATQKWHVQTKAGESLDADAVIVAAPALHAAPLLRAVADVATDELGKIRYASTATVSLAYRADDFPRPPDSFGFVVPAIEKRKIMACTFSSLKYLGRAPEGHLLLRAFVGGALQPEYFRADDATMEQNVRDELASLMGVTAKPILSRIWRHPNSMPQYHIGHDSRVERIESALNSFPTLALAGSAYHGVGIADCVRTGEEAAEKVIAALQ

Samples

Sample ID Description Type Environment
1 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
86 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
87 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.45
Rhizosphere 99.55
Stem 0
Stem Tuber 0
Unclassified 18.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070704_100056555 3300005549 Bacteria 2786
2 JGI25406J46586_10006790 3300003203 Bacteria 5257
3 Ga0065712_10000212 3300005290 Bacteria 30259
4 Ga0065707_10011336 3300005295 Bacteria 3323
5 Ga0070670_100005432 3300005331 Bacteria 10747
6 Ga0068869_100029674 3300005334 Bacteria 3835
7 Ga0070680_100031609 3300005336 Bacteria 4257
8 Ga0070691_10025887 3300005341 Unclassified 2734
9 Ga0070668_100017471 3300005347 Bacteria 5377
10 Ga0070669_100041533 3300005353 Bacteria 3345
11 Ga0070671_100070223 3300005355 Unclassified 2921
12 Ga0070711_100030373 3300005439 Bacteria 3576
13 Ga0070662_100153481 3300005457 Unclassified 1795
14 Ga0070681_10106788 3300005458 Bacteria 2741
15 Ga0070681_10148316 3300005458 Unclassified 2273
16 Ga0068867_100051252 3300005459 Unclassified 3043
17 Ga0070707_100014686 3300005468 Bacteria 7339
18 Ga0070698_100283579 3300005471 Bacteria 1588
19 Ga0070699_100081765 3300005518 Bacteria 2816
20 Ga0070679_100011149 3300005530 Bacteria 8561
21 Ga0070679_100084836 3300005530 Unclassified 3155
22 Ga0070697_100111151 3300005536 Bacteria 2284
23 Ga0068853_100244152 3300005539 Unclassified 1647
24 Ga0070686_100077220 3300005544 Bacteria 2195
25 Ga0070696_100077675 3300005546 Bacteria 2346
26 Ga0070665_100146299 3300005548 Unclassified 2366
27 Ga0068855_100018798 3300005563 Bacteria 8305
28 Ga0070664_100018018 3300005564 Bacteria 5797
29 Ga0070664_100168529 3300005564 Unclassified 1942
30 Ga0068857_100006911 3300005577 Bacteria 9770
31 Ga0068854_100155240 3300005578 Bacteria 1768
32 Ga0068856_100134334 3300005614 Unclassified 2479
33 Ga0068859_100052221 3300005617 Bacteria 4109
34 Ga0068859_100205222 3300005617 Bacteria 2056
35 Ga0068870_10008103 3300005840 Bacteria 4710
36 Ga0068858_100126225 3300005842 Bacteria 2396
37 Ga0068858_100142795 3300005842 Bacteria 2248
38 Ga0068862_100091764 3300005844 Bacteria 2646
39 Ga0068862_100153040 3300005844 Bacteria 2054
40 Ga0081455_10000512 3300005937 Bacteria 50237
41 Ga0081538_10007454 3300005981 Bacteria 9465
42 Ga0081539_10000416 3300005985 Bacteria 90711
43 Ga0075432_10030493 3300006058 Bacteria 1864
44 Ga0075431_100000900 3300006847 Bacteria 26186
45 Ga0075431_100006870 3300006847 Bacteria 11306
46 Ga0075433_10010612 3300006852 Bacteria 7406
47 Ga0075433_10017059 3300006852 Bacteria 6003
48 Ga0075433_10024265 3300006852 Bacteria 5115
49 Ga0075433_10063949 3300006852 Unclassified 3225
50 Ga0075434_100001884 3300006871 Bacteria 18155
51 Ga0075434_100022776 3300006871 Bacteria 6100
52 Ga0075434_100169256 3300006871 Bacteria 2205
53 Ga0097620_100052216 3300006931 Bacteria 4109
54 Ga0097620_100205223 3300006931 Bacteria 2056
55 Ga0075435_100095930 3300007076 Unclassified 2453
56 Ga0111539_10000916 3300009094 Bacteria 38556
57 Ga0111539_10021330 3300009094 Bacteria 7975
58 Ga0111539_10024886 3300009094 Bacteria 7341
59 Ga0111539_10140210 3300009094 Bacteria 2831
60 Ga0111539_10167988 3300009094 Bacteria 2564
61 Ga0114129_10010368 3300009147 Bacteria 13290
62 Ga0114129_10054070 3300009147 Bacteria 5630
63 Ga0114129_10057821 3300009147 Bacteria 5426
64 Ga0105241_10027562 3300009174 Unclassified 4231
65 Ga0105242_10180875 3300009176 Unclassified 1860
66 Ga0105249_10000082 3300009553 Bacteria 137479
67 Ga0105249_10197058 3300009553 Bacteria 1969
68 Ga0105246_10011468 3300011119 Bacteria 5501
69 Ga0157378_10029118 3300013297 Bacteria 4875
70 Ga0163162_10000002 3300013306 Bacteria 717331
71 Ga0163162_10164603 3300013306 Bacteria 2341
72 Ga0163162_10211048 3300013306 Bacteria 2071
73 Ga0157372_10059884 3300013307 Bacteria 4260
74 Ga0157380_10015685 3300014326 Bacteria 5571
75 Ga0157380_10018500 3300014326 Bacteria 5173
76 Ga0157376_10024155 3300014969 Bacteria 4768
77 Ga0163161_10096959 3300017792 Bacteria 2190
78 Ga0207645_10012706 3300025907 Bacteria 5709
79 Ga0207684_10054879 3300025910 Bacteria 3381
80 Ga0207707_10005570 3300025912 Bacteria 11018
81 Ga0207663_10022822 3300025916 Bacteria 3583
82 Ga0207660_10086136 3300025917 Bacteria 2319
83 Ga0207649_10014009 3300025920 Bacteria 4488
84 Ga0207646_10019053 3300025922 Bacteria 6387
85 Ga0207681_10047052 3300025923 Unclassified 2904
86 Ga0207650_10001233 3300025925 Bacteria 18644
87 Ga0207644_10058454 3300025931 Unclassified 2787
88 Ga0207706_10002680 3300025933 Bacteria 17353
89 Ga0207706_10167477 3300025933 Bacteria 1931
90 Ga0207686_10135435 3300025934 Unclassified 1695
91 Ga0207691_10009753 3300025940 Bacteria 9217
92 Ga0207689_10028707 3300025942 Unclassified 4653
93 Ga0207689_10035968 3300025942 Bacteria 4111
94 Ga0207679_10006037 3300025945 Bacteria 7630
95 Ga0207712_10000370 3300025961 Bacteria 39744
96 Ga0207668_10011806 3300025972 Bacteria 5323
97 Ga0207678_10084513 3300026067 Unclassified 2714
98 Ga0207708_10025900 3300026075 Bacteria 4437
99 Ga0207674_10006800 3300026116 Bacteria 13419
100 Ga0207683_10038345 3300026121 Unclassified 4176
101 Ga0209982_1000676 3300027552 Bacteria 4337
102 Ga0210002_1001304 3300027617 Bacteria 3486
103 Ga0209983_1006240 3300027665 Bacteria 2456
104 Ga0209971_1002204 3300027682 Bacteria 4729
105 Ga0209998_10005435 3300027717 Bacteria 2667
106 Ga0209974_10006146 3300027876 Bacteria 4207
107 Ga0209974_10010422 3300027876 Bacteria 3137
108 Ga0207428_10002620 3300027907 Bacteria 17942
109 Ga0207428_10172283 3300027907 Bacteria 1638
110 Ga0268265_10006214 3300028380 Bacteria 8094
111 Ga0268264_10059115 3300028381 Bacteria 3211
112 Ga0265330_10011552 3300031235 Bacteria 4138
113 Ga0265332_10000602 3300031238 Bacteria 23590
114 Ga0265328_10003783 3300031239 Bacteria 6655
115 Ga0265320_10029947 3300031240 Bacteria 2813
116 Ga0265329_10003848 3300031242 Bacteria 6441
117 Ga0265339_10000279 3300031249 Bacteria 41139
118 Ga0265331_10000183 3300031250 Bacteria 76963
119 Ga0265331_10044484 3300031250 Bacteria 2147
120 Ga0265316_10000148 3300031344 Bacteria 76964
121 Ga0265316_10173948 3300031344 Bacteria 1605
122 Ga0307408_100028231 3300031548 Bacteria 3876
123 Ga0265313_10063026 3300031595 Unclassified 1730
124 Ga0265314_10000984 3300031711 Bacteria 33551
125 Ga0265314_10002991 3300031711 Bacteria 16727
126 Ga0265314_10112498 3300031711 Bacteria 1728
127 Ga0265342_10010451 3300031712 Bacteria 6436
128 Ga0265342_10023812 3300031712 Bacteria 3870
129 Ga0307405_10015357 3300031731 Bacteria 4146
130 Ga0307413_10002694 3300031824 Bacteria 7282
131 Ga0307410_10019992 3300031852 Unclassified 4087
132 Ga0307409_100016057 3300031995 Bacteria 4940
133 Ga0307409_100174695 3300031995 Bacteria 1895
134 Ga0307416_100003431 3300032002 Bacteria 9307
135 Ga0307414_10003232 3300032004 Bacteria 8674
136 Ga0307415_100015488 3300032126 Unclassified 4517
137 Ga0373939_0036209 3300035114 Unclassified 1459
138 Ga0373937_0045329 3300036401 Bacteria 4019
139 Ga0451577_0002547 3300042876 Bacteria 21528
140 Ga0453683_0000373 3300044673 Bacteria 53639
141 Ga0453683_0066335 3300044673 Bacteria 2256
142 Ga0453684_0002981 3300044712 Bacteria 39484
143 Ga0453684_0299698 3300044712 Unclassified 1827
144 Ga0451576_0000529 3300045051 Bacteria 82682
145 Ga0451576_0012466 3300045051 Bacteria 9544
146 Ga0451576_0124941 3300045051 Bacteria 2681
147 Ga0451576_0144292 3300045051 Bacteria 2482
148 Ga0496112_0017754 3300048915 Bacteria 6696
149 Ga0501031_0014607 3300049568 Bacteria 5105
150 Ga0501033_0002641 3300049570 Bacteria 15081
151 Ga0501033_0118549 3300049570 Unclassified 1922
152 Ga0501036_0087322 3300049572 Unclassified 2636
153 Ga0501037_0001295 3300049573 Bacteria 18398
154 Ga0501038_0003892 3300049574 Bacteria 13880
155 Ga0501039_0013624 3300049575 Bacteria 6218
156 Ga0501039_0102689 3300049575 Bacteria 2231
157 Ga0501040_0026561 3300049576 Bacteria 3894
158 Ga0501041_0009348 3300049577 Bacteria 5774
159 Ga0501041_0075378 3300049577 Bacteria 2074
160 Ga0501042_0085748 3300049578 Unclassified 2258
161 Ga0501043_0001665 3300049579 Bacteria 19295
162 Ga0501046_0025672 3300049580 Bacteria 4819
163 Ga0501046_0062600 3300049580 Unclassified 2906
164 Ga0501068_0020515 3300049584 Bacteria 3851
165 Ga0501069_0038410 3300049585 Unclassified 2643
166 Ga0501070_0005136 3300049586 Bacteria 11155
167 Ga0501070_0200480 3300049586 Unclassified 1639
168 Ga0501071_0065752 3300049587 Unclassified 2633
169 Ga0501072_0007413 3300049588 Bacteria 8324
170 Ga0501072_0090559 3300049588 Bacteria 2428
171 Ga0501074_0001858 3300049590 Bacteria 14490
172 Ga0501075_0002344 3300049591 Bacteria 12574
173 Ga0501075_0103687 3300049591 Unclassified 2161
174 Ga0501076_0085574 3300049592 Bacteria 2533
175 Ga0501076_0098962 3300049592 Unclassified 2349
176 Ga0501077_0001881 3300049593 Bacteria 12703
177 Ga0501077_0007607 3300049593 Bacteria 6686
178 Ga0501077_0017803 3300049593 Bacteria 4488
179 Ga0501079_0004952 3300049741 Bacteria 9875
180 Ga0501079_0012532 3300049741 Bacteria 6472
181 Ga0501080_0048045 3300049742 Bacteria 3973
182 Ga0501080_0074910 3300049742 Unclassified 3149
183 Ga0501081_0005109 3300049743 Bacteria 8449
184 Ga0501081_0011689 3300049743 Bacteria 5746
185 Ga0501081_0127334 3300049743 Bacteria 1817
186 Ga0501083_0000620 3300049744 Bacteria 22897
187 Ga0501083_0101359 3300049744 Unclassified 1898
188 Ga0501045_0003318 3300049824 Bacteria 11004
189 Ga0501045_0151937 3300049824 Bacteria 1723
190 nmdc:mga05p37_39523_c1 3300050507 Bacteria 5793
191 nmdc:mga05p37_6771_c1 3300050507 Bacteria 13506
192 nmdc:mga09592_99066_c1 3300050508 Bacteria 2495
193 nmdc:mga0qj67_118977_c1 3300050509 Bacteria 2136
194 nmdc:mga06r32_109_c1 3300050510 Bacteria 58480
195 nmdc:mga08y16_141036_c1 3300050511 Bacteria 2506
196 nmdc:mga08y16_207011_c1 3300050511 Bacteria 2032
197 nmdc:mga08y16_65419_c1 3300050511 Unclassified 3796
198 nmdc:mga0n895_2197_c1 3300050512 Bacteria 15095
199 nmdc:mga0n895_226179_c1 3300050512 Bacteria 1899
200 nmdc:mga0n895_271971_c1 3300050512 Bacteria 1719
201 nmdc:mga0n895_40961_c1 3300050512 Unclassified 4501
202 nmdc:mga0rr50_127690_c1 3300050513 Unclassified 2032
203 nmdc:mga0rr50_17202_c1 3300050513 Bacteria 4820
204 nmdc:mga0rr50_2682_c1 3300050513 Bacteria 10081
205 nmdc:mga08x19_129804_c1 3300050514 Unclassified 1694
206 nmdc:mga0a205_10636_c1 3300050515 Bacteria 8457
207 nmdc:mga0a205_108889_c1 3300050515 Bacteria 2669
208 nmdc:mga0a205_30700_c1 3300050515 Bacteria 5147
209 nmdc:mga0a205_36714_c1 3300050515 Unclassified 4710
210 nmdc:mga0a205_5172_c1 3300050515 Bacteria 11732
211 nmdc:mga0a205_9537_c1 3300050515 Bacteria 8880
212 Ga0501084_0008555 3300054114 Bacteria 8463
213 Ga0501084_0030483 3300054114 Unclassified 4510
214 Ga0501084_0090032 3300054114 Bacteria 2575
215 Ga0590071_002333 3300059421 Bacteria 4795
216 Ga0501082_0009342 3300060353 Bacteria 8452
217 Ga0501082_0120673 3300060353 Bacteria 2272
218 Ga0530510_0007150 3300061734 Bacteria 7768
219 Ga0530510_0007788 3300061734 Bacteria 7466
220 Ga0530510_0023679 3300061734 Bacteria 4378
221 Ga0530510_0027482 3300061734 Bacteria 4075
222 Ga0530510_0036117 3300061734 Bacteria 3562
223 Ga0070704_100056555
224 JGI25406J46586_10006790
225 Ga0065712_10000212
226 Ga0065707_10011336
227 Ga0070670_100005432
228 Ga0068869_100029674
229 Ga0070680_100031609
230 Ga0070691_10025887
231 Ga0070668_100017471
232 Ga0070669_100041533
233 Ga0070671_100070223
234 Ga0070711_100030373
235 Ga0070662_100153481
236 Ga0070681_10106788
237 Ga0070681_10148316
238 Ga0068867_100051252
239 Ga0070707_100014686
240 Ga0070698_100283579
241 Ga0070699_100081765
242 Ga0070679_100011149
243 Ga0070679_100084836
244 Ga0070697_100111151
245 Ga0068853_100244152
246 Ga0070686_100077220
247 Ga0070696_100077675
248 Ga0070665_100146299
249 Ga0068855_100018798
250 Ga0070664_100018018
251 Ga0070664_100168529
252 Ga0068857_100006911
253 Ga0068854_100155240
254 Ga0068856_100134334
255 Ga0068859_100052221
256 Ga0068859_100205222
257 Ga0068870_10008103
258 Ga0068858_100126225
259 Ga0068858_100142795
260 Ga0068862_100091764
261 Ga0068862_100153040
262 Ga0081455_10000512
263 Ga0081538_10007454
264 Ga0081539_10000416
265 Ga0075432_10030493
266 Ga0075431_100000900
267 Ga0075431_100006870
268 Ga0075433_10010612
269 Ga0075433_10017059
270 Ga0075433_10024265
271 Ga0075433_10063949
272 Ga0075434_100001884
273 Ga0075434_100022776
274 Ga0075434_100169256
275 Ga0097620_100052216
276 Ga0097620_100205223
277 Ga0075435_100095930
278 Ga0111539_10000916
279 Ga0111539_10021330
280 Ga0111539_10024886
281 Ga0111539_10140210
282 Ga0111539_10167988
283 Ga0114129_10010368
284 Ga0114129_10054070
285 Ga0114129_10057821
286 Ga0105241_10027562
287 Ga0105242_10180875
288 Ga0105249_10000082
289 Ga0105249_10197058
290 Ga0105246_10011468
291 Ga0157378_10029118
292 Ga0163162_10000002
293 Ga0163162_10164603
294 Ga0163162_10211048
295 Ga0157372_10059884
296 Ga0157380_10015685
297 Ga0157380_10018500
298 Ga0157376_10024155
299 Ga0163161_10096959
300 Ga0207645_10012706
301 Ga0207684_10054879
302 Ga0207707_10005570
303 Ga0207663_10022822
304 Ga0207660_10086136
305 Ga0207649_10014009
306 Ga0207646_10019053
307 Ga0207681_10047052
308 Ga0207650_10001233
309 Ga0207644_10058454
310 Ga0207706_10002680
311 Ga0207706_10167477
312 Ga0207686_10135435
313 Ga0207691_10009753
314 Ga0207689_10028707
315 Ga0207689_10035968
316 Ga0207679_10006037
317 Ga0207712_10000370
318 Ga0207668_10011806
319 Ga0207678_10084513
320 Ga0207708_10025900
321 Ga0207674_10006800
322 Ga0207683_10038345
323 Ga0209982_1000676
324 Ga0210002_1001304
325 Ga0209983_1006240
326 Ga0209971_1002204
327 Ga0209998_10005435
328 Ga0209974_10006146
329 Ga0209974_10010422
330 Ga0207428_10002620
331 Ga0207428_10172283
332 Ga0268265_10006214
333 Ga0268264_10059115
334 Ga0265330_10011552
335 Ga0265332_10000602
336 Ga0265328_10003783
337 Ga0265320_10029947
338 Ga0265329_10003848
339 Ga0265339_10000279
340 Ga0265331_10000183
341 Ga0265331_10044484
342 Ga0265316_10000148
343 Ga0265316_10173948
344 Ga0307408_100028231
345 Ga0265313_10063026
346 Ga0265314_10000984
347 Ga0265314_10002991
348 Ga0265314_10112498
349 Ga0265342_10010451
350 Ga0265342_10023812
351 Ga0307405_10015357
352 Ga0307413_10002694
353 Ga0307410_10019992
354 Ga0307409_100016057
355 Ga0307409_100174695
356 Ga0307416_100003431
357 Ga0307414_10003232
358 Ga0307415_100015488
359 Ga0373939_0036209
360 Ga0373937_0045329
361 Ga0451577_0002547
362 Ga0453683_0000373
363 Ga0453683_0066335
364 Ga0453684_0002981
365 Ga0453684_0299698
366 Ga0451576_0000529
367 Ga0451576_0012466
368 Ga0451576_0124941
369 Ga0451576_0144292
370 Ga0496112_0017754
371 Ga0501031_0014607
372 Ga0501033_0002641
373 Ga0501033_0118549
374 Ga0501036_0087322
375 Ga0501037_0001295
376 Ga0501038_0003892
377 Ga0501039_0013624
378 Ga0501039_0102689
379 Ga0501040_0026561
380 Ga0501041_0009348
381 Ga0501041_0075378
382 Ga0501042_0085748
383 Ga0501043_0001665
384 Ga0501046_0025672
385 Ga0501046_0062600
386 Ga0501068_0020515
387 Ga0501069_0038410
388 Ga0501070_0005136
389 Ga0501070_0200480
390 Ga0501071_0065752
391 Ga0501072_0007413
392 Ga0501072_0090559
393 Ga0501074_0001858
394 Ga0501075_0002344
395 Ga0501075_0103687
396 Ga0501076_0085574
397 Ga0501076_0098962
398 Ga0501077_0001881
399 Ga0501077_0007607
400 Ga0501077_0017803
401 Ga0501079_0004952
402 Ga0501079_0012532
403 Ga0501080_0048045
404 Ga0501080_0074910
405 Ga0501081_0005109
406 Ga0501081_0011689
407 Ga0501081_0127334
408 Ga0501083_0000620
409 Ga0501083_0101359
410 Ga0501045_0003318
411 Ga0501045_0151937
412 nmdc:mga05p37_39523_c1
413 nmdc:mga05p37_6771_c1
414 nmdc:mga09592_99066_c1
415 nmdc:mga0qj67_118977_c1
416 nmdc:mga06r32_109_c1
417 nmdc:mga08y16_141036_c1
418 nmdc:mga08y16_207011_c1
419 nmdc:mga08y16_65419_c1
420 nmdc:mga0n895_2197_c1
421 nmdc:mga0n895_226179_c1
422 nmdc:mga0n895_271971_c1
423 nmdc:mga0n895_40961_c1
424 nmdc:mga0rr50_127690_c1
425 nmdc:mga0rr50_17202_c1
426 nmdc:mga0rr50_2682_c1
427 nmdc:mga08x19_129804_c1
428 nmdc:mga0a205_10636_c1
429 nmdc:mga0a205_108889_c1
430 nmdc:mga0a205_30700_c1
431 nmdc:mga0a205_36714_c1
432 nmdc:mga0a205_5172_c1
433 nmdc:mga0a205_9537_c1
434 Ga0501084_0008555
435 Ga0501084_0030483
436 Ga0501084_0090032
437 Ga0590071_002333
438 Ga0501082_0009342
439 Ga0501082_0120673
440 Ga0530510_0007150
441 Ga0530510_0007788
442 Ga0530510_0023679
443 Ga0530510_0027482
444 Ga0530510_0036117

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

38

496

0.9

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

33

104

0.89

PF01266

DAO

FAD dependent oxidoreductase

30

479

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i6d-assembly2.cif.gz_B crystal structure of ppo from bacillus subtilis with af 0.9305 7 474
3i6d-assembly1.cif.gz_A crystal structure of ppo from bacillus subtilis with af 0.9294 7 474
3i6d-assembly2.cif.gz_B crystal structure of ppo from bacillus subtilis with af 0.9219 7 474
3i6d-assembly1.cif.gz_A crystal structure of ppo from bacillus subtilis with af 0.9207 7 474
2ivd-assembly2.cif.gz_B structure of protoporphyrinogen oxidase from myxococcus xanthus with acifluorfen 0.9181 8 472
ID Description Score Start End Superfamily
af_A0A0N7KJA0_179_283_3.90.660.20 Alpha Beta;Alpha-Beta Complex;Polyamine Oxidase; Chain A, domain 2;Protoporphyrinogen oxidase, mitochondrial; domain 2 0.9501 317 416 3.90.660.20
af_Q2FXA5_5_464_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9343 10 471 3.50.50.60
af_Q2FXA5_5_464_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9284 10 471 3.50.50.60
3i6dA02 Alpha Beta;Alpha-Beta Complex;Polyamine Oxidase; Chain A, domain 2;Protoporphyrinogen oxidase, mitochondrial; domain 2 0.9254 46 421 3.90.660.20
3i6dA02 Alpha Beta;Alpha-Beta Complex;Polyamine Oxidase; Chain A, domain 2;Protoporphyrinogen oxidase, mitochondrial; domain 2 0.9162 46 421 3.90.660.20
ID Description Score Start End GO Terms
AF-A0A1F8ZVE1-F1-model_v4 Coproporphyrinogen III oxidase (EC 1.3.3.15) 0.9853 234 474 GO:0004729
GO:0005737
GO:0006783
AF-A0A7C2ACW2-F1-model_v4 Coproporphyrinogen III oxidase (EC 1.3.3.15) 0.984 8 475 GO:0004729
GO:0005737
GO:0006783
AF-A0A1F8XQB9-F1-model_v4 Coproporphyrinogen III oxidase (EC 1.3.3.15) 0.9792 284 475 GO:0004729
GO:0005737
GO:0006783
AF-A0A7C2ACW2-F1-model_v4 Coproporphyrinogen III oxidase (EC 1.3.3.15) 0.9777 8 475 GO:0004729
GO:0005737
GO:0006783
AF-A0A2V7I841-F1-model_v4 Coproporphyrinogen III oxidase (EC 1.3.3.15) 0.9759 10 380 GO:0004729
GO:0005737
GO:0006783

Map