F332490

General Info

Members Datasets Scaffolds Average Seq Length
220 161 440 238

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_1356577|Ga0436365_1356577_58953_59825
Length 283
Sequence VPAKDAKGREKKDSAHSTHSRSTIVAEPTPFFLSRLFASFAGTFFSFMLELDHLAVAYGSITALHDVSLRVDAGAIVTLIGANGAGKSTTLRAISGLLAPRAGSIRFEGQNIAGLPAHRIVEMGISHVPEGRMIFANLTVLENLKMGAYRFKTNPRWSRDLDYVFNVFPRLKERERQAAGTLSGGEQQMLAIGRALTGQPRFLMLDEPSLGIAPILVKTIFEKIVEVNQTLGITVLLVEQNANLALEVSRYGYVLETGRVILHDDSAALRANAQVRHAYLGAG

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
81 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
82 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
83 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
84 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
85 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
86 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
87 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
88 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
89 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
90 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
91 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
92 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
93 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
94 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
100 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
101 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
149 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
150 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
151 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
152 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
153 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
154 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
155 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
158 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
161 2643221654 Rhizobacter sp. Root404 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.09
Metatranscriptomes 0
Isolates 0.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.09
Nodule 0
Rhizoplane 2.27
Rhizosphere 68.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_1356577 3300039437 Bacteria 61760
2 Ga0065707_10115526 3300005295 Bacteria 2264
3 Ga0070690_100117755 3300005330 Bacteria 1780
4 Ga0070690_100188384 3300005330 Bacteria 1429
5 Ga0070680_100065319 3300005336 Bacteria 2982
6 Ga0068868_100166127 3300005338 Bacteria 1825
7 Ga0068868_100678438 3300005338 Bacteria 920
8 Ga0070689_100004867 3300005340 Bacteria 9117
9 Ga0070689_100435790 3300005340 Bacteria 1113
10 Ga0070687_100364268 3300005343 Bacteria 937
11 Ga0070688_100066446 3300005365 Bacteria 2295
12 Ga0070688_100093441 3300005365 Bacteria 1970
13 Ga0070700_100656392 3300005441 Bacteria 829
14 Ga0070706_100339039 3300005467 Bacteria 1401
15 Ga0070699_100203153 3300005518 Bacteria 1762
16 Ga0070697_100117880 3300005536 Bacteria 2218
17 Ga0070686_100069227 3300005544 Bacteria 2304
18 Ga0070665_100008996 3300005548 Bacteria 10112
19 Ga0070665_100800091 3300005548 Bacteria 956
20 Ga0068857_100181396 3300005577 Bacteria 1916
21 Ga0068864_100009857 3300005618 Bacteria 7877
22 Ga0068863_100302715 3300005841 Bacteria 1551
23 Ga0081455_10001710 3300005937 Bacteria 26562
24 Ga0081540_1013844 3300005983 Bacteria 5217
25 Ga0075365_10004760 3300006038 Bacteria 7235
26 Ga0075368_10008857 3300006042 Bacteria 3605
27 Ga0075363_100136780 3300006048 Bacteria 1377
28 Ga0075364_10015927 3300006051 Bacteria 4668
29 Ga0070716_100467893 3300006173 Bacteria 923
30 Ga0075362_10018358 3300006177 Bacteria 2892
31 Ga0075367_10004452 3300006178 Bacteria 6843
32 Ga0075367_10058658 3300006178 Bacteria 2291
33 Ga0075366_10211242 3300006195 Bacteria 1181
34 Ga0097621_100253438 3300006237 Bacteria 1542
35 Ga0075370_10002838 3300006353 Bacteria 8130
36 Ga0075428_100000615 3300006844 Bacteria 36398
37 Ga0075431_100368821 3300006847 Bacteria 1441
38 Ga0075429_100000150 3300006880 Bacteria 43105
39 Ga0075429_100446666 3300006880 Bacteria 1133
40 Ga0075436_100381351 3300006914 Bacteria 1019
41 Ga0099794_10192910 3300007265 Bacteria 1042
42 Ga0099795_10055327 3300007788 Bacteria 1457
43 Ga0111539_10027345 3300009094 Bacteria 6966
44 Ga0111539_10169779 3300009094 Bacteria 2549
45 Ga0105245_10088625 3300009098 Bacteria 2842
46 Ga0105245_10237473 3300009098 Bacteria 1765
47 Ga0105245_10266371 3300009098 Bacteria 1669
48 Ga0114129_10000889 3300009147 Bacteria 38964
49 Ga0114129_10048724 3300009147 Bacteria 5954
50 Ga0105246_10897519 3300011119 Bacteria 794
51 Ga0157378_10715869 3300013297 Bacteria 1021
52 Ga0163162_10051411 3300013306 Bacteria 4135
53 Ga0157372_10221252 3300013307 Bacteria 2194
54 Ga0163163_10990098 3300014325 Bacteria 904
55 Ga0157379_10342712 3300014968 Bacteria 1367
56 Ga0213876_10080377 3300021384 Bacteria 1723
57 Ga0213875_10000007 3300021388 Bacteria 562717
58 Ga0213871_10000317 3300021441 Bacteria 6140
59 Ga0207684_10138907 3300025910 Bacteria 2088
60 Ga0207707_10651194 3300025912 Bacteria 888
61 Ga0207662_10023012 3300025918 Bacteria 3576
62 Ga0207681_10432271 3300025923 Bacteria 1068
63 Ga0207687_10030080 3300025927 Bacteria 3659
64 Ga0207687_10132693 3300025927 Bacteria 1880
65 Ga0207670_10004950 3300025936 Bacteria 7250
66 Ga0207665_10703269 3300025939 Bacteria 795
67 Ga0207711_10533671 3300025941 Bacteria 1094
68 Ga0207677_10009249 3300026023 Bacteria 5535
69 Ga0207708_10156862 3300026075 Bacteria 1795
70 Ga0207641_10019015 3300026088 Bacteria 5635
71 Ga0207641_10227263 3300026088 Bacteria 1733
72 Ga0207676_10033707 3300026095 Bacteria 3871
73 Ga0207674_10570935 3300026116 Bacteria 1093
74 Ga0207683_10169162 3300026121 Bacteria 1979
75 Ga0209813_10002599 3300027866 Bacteria 4148
76 Ga0207428_10019318 3300027907 Bacteria 5810
77 Ga0207428_10119762 3300027907 Bacteria 2019
78 Ga0268266_10024063 3300028379 Bacteria 5183
79 Ga0307517_10009033 3300028786 Bacteria 14208
80 Ga0307517_10111635 3300028786 Bacteria 2076
81 Ga0307515_10002038 3300028794 Bacteria 44609
82 Ga0307515_10011006 3300028794 Bacteria 17234
83 Ga0307515_10012290 3300028794 Bacteria 16114
84 Ga0307515_10038038 3300028794 Bacteria 7713
85 Ga0307515_10287619 3300028794 Bacteria 1343
86 Ga0265338_10114108 3300028800 Bacteria 2169
87 Ga0307512_10011610 3300030522 Bacteria 8338
88 Ga0307512_10040265 3300030522 Bacteria 3903
89 Ga0265320_10042668 3300031240 Bacteria 2248
90 Ga0265327_10011734 3300031251 Bacteria 5999
91 Ga0307513_10075651 3300031456 Bacteria 3495
92 Ga0307513_10521578 3300031456 Bacteria 903
93 Ga0307509_10001216 3300031507 Bacteria 43713
94 Ga0307509_10011687 3300031507 Bacteria 10603
95 Ga0307509_10039549 3300031507 Bacteria 5137
96 Ga0307509_10108410 3300031507 Bacteria 2790
97 Ga0307509_10431953 3300031507 Bacteria 1015
98 Ga0307408_100341801 3300031548 Bacteria 1267
99 Ga0307508_10022566 3300031616 Bacteria 5719
100 Ga0307508_10026018 3300031616 Bacteria 5304
101 Ga0307508_10097722 3300031616 Bacteria 2528
102 Ga0307508_10431165 3300031616 Bacteria 910
103 Ga0307514_10189102 3300031649 Bacteria 1314
104 Ga0265314_10132092 3300031711 Bacteria 1556
105 Ga0307516_10015404 3300031730 Bacteria 8047
106 Ga0307507_10103212 3300033179 Bacteria 2374
107 Ga0307510_10051446 3300033180 Bacteria 4356
108 Ga0307510_10194534 3300033180 Bacteria 1571
109 Ga0307510_10241055 3300033180 Bacteria 1302
110 Ga0373930_0001882 3300034816 Bacteria 3198
111 Ga0373950_0004277 3300034818 Bacteria 2084
112 Ga0373958_0033578 3300034819 Bacteria 1018
113 Ga0373940_0001551 3300035088 Bacteria 4201
114 Ga0373949_0010414 3300035090 Bacteria 2038
115 Ga0373951_0006250 3300035091 Bacteria 2728
116 Ga0373951_0023497 3300035091 Bacteria 1424
117 Ga0373952_0002579 3300035092 Bacteria 3263
118 Ga0373932_0001635 3300035112 Bacteria 6143
119 Ga0373932_0009367 3300035112 Bacteria 2354
120 Ga0373939_0087204 3300035114 Bacteria 1048
121 Ga0373960_0010436 3300035121 Bacteria 2268
122 Ga0373960_0015973 3300035121 Bacteria 1925
123 Ga0373943_0165529 3300035170 Bacteria 1207
124 Ga0373942_0012016 3300035207 Bacteria 2061
125 Ga0373961_0005346 3300035241 Bacteria 3088
126 Ga0373962_0037395 3300035242 Bacteria 1355
127 Ga0373931_0000123 3300035691 Bacteria 34923
128 Ga0373931_0014245 3300035691 Bacteria 3883
129 Ga0373925_0216958 3300037068 Bacteria 1526
130 Ga0373925_0283812 3300037068 Bacteria 1334
131 Ga0373925_0646462 3300037068 Bacteria 871
132 Ga0436364_0461857 3300037853 Bacteria 19352
133 Ga0436365_0038154 3300039437 Bacteria 2981
134 Ga0436365_0959367 3300039437 Bacteria 3259
135 Ga0436360_0764361 3300039438 Bacteria 10077
136 Ga0436361_0082688 3300039447 Bacteria 3921
137 Ga0436361_1100871 3300039447 Bacteria 2323
138 Ga0451791_0829674 3300041451 Bacteria 837
139 Ga0451793_0498605 3300041452 Bacteria 1488
140 Ga0451804_0997646 3300041463 Bacteria 917
141 Ga0451577_0004835 3300042876 Bacteria 14063
142 Ga0451577_0017686 3300042876 Bacteria 6581
143 Ga0451577_0037457 3300042876 Bacteria 4365
144 Ga0451577_0057258 3300042876 Bacteria 3475
145 Ga0453683_0218533 3300044673 Bacteria 1211
146 Ga0453684_0219091 3300044712 Bacteria 2206
147 Ga0453684_0624800 3300044712 Bacteria 1178
148 Ga0466957_0065058 3300044842 Bacteria 2245
149 Ga0451576_0001013 3300045051 Bacteria 51916
150 Ga0451576_0026198 3300045051 Bacteria 6272
151 Ga0451576_0043265 3300045051 Bacteria 4752
152 Ga0451576_0052296 3300045051 Bacteria 4280
153 Ga0451576_0166394 3300045051 Bacteria 2301
154 Ga0451576_0255931 3300045051 Bacteria 1830
155 Ga0451576_0792770 3300045051 Bacteria 995
156 Ga0466967_0674812 3300045976 Bacteria 1023
157 Ga0495592_0000563 3300046454 Bacteria 26400
158 Ga0495610_0017371 3300046512 Bacteria 4105
159 Ga0495632_0034465 3300046519 Bacteria 2590
160 Ga0495648_0151432 3300046524 Bacteria 1210
161 Ga0495625_0016815 3300046660 Bacteria 5744
162 Ga0495646_0057848 3300046680 Bacteria 2319
163 Ga0495676_0202687 3300047321 Bacteria 1378
164 Ga0495680_0323137 3300047322 Bacteria 1080
165 Ga0495675_0111985 3300047444 Bacteria 1703
166 Ga0495686_0023514 3300047472 Bacteria 4063
167 Ga0495686_0127474 3300047472 Bacteria 1512
168 Ga0495686_0176814 3300047472 Bacteria 1239
169 Ga0495593_0142300 3300047673 Bacteria 1215
170 Ga0496102_0012252 3300048905 Bacteria 7415
171 Ga0496106_0083596 3300048909 Bacteria 2455
172 Ga0496121_0120043 3300048924 Bacteria 1987
173 Ga0501032_0096315 3300049569 Bacteria 1962
174 Ga0501034_0411680 3300049571 Bacteria 1274
175 Ga0501036_0426342 3300049572 Bacteria 1106
176 Ga0501036_0745254 3300049572 Bacteria 808
177 Ga0501043_0025514 3300049579 Bacteria 4638
178 Ga0501047_0338377 3300049581 Bacteria 1343
179 Ga0501067_0189583 3300049583 Bacteria 1145
180 Ga0501068_0090532 3300049584 Bacteria 1887
181 Ga0501068_0198012 3300049584 Bacteria 1274
182 Ga0501072_0334905 3300049588 Bacteria 1202
183 Ga0501072_0354437 3300049588 Bacteria 1165
184 Ga0501075_0100710 3300049591 Bacteria 2194
185 Ga0501076_0495746 3300049592 Bacteria 1007
186 Ga0501080_0513465 3300049742 Bacteria 1070
187 Ga0501035_0185928 3300049822 Bacteria 1788
188 Ga0501045_0218264 3300049824 Bacteria 1420
189 nmdc:mga03n38_4839_c1 3300050490 Bacteria 4512
190 nmdc:mga0yw44_180292_c1 3300050492 Bacteria 1390
191 nmdc:mga0k408_201616_c1 3300050493 Bacteria 1188
192 nmdc:mga0k408_732_c1 3300050493 Bacteria 18001
193 nmdc:mga06z11_6546_c1 3300050494 Bacteria 4749
194 nmdc:mga07m45_226427_c1 3300050496 Bacteria 1088
195 nmdc:mga07m45_434_c1 3300050496 Bacteria 17366
196 nmdc:mga05p37_390_c1 3300050507 Bacteria 47542
197 nmdc:mga05p37_8851_c1 3300050507 Bacteria 11895
198 nmdc:mga09592_1204_c1 3300050508 Bacteria 20724
199 nmdc:mga09592_204284_c1 3300050508 Bacteria 1711
200 nmdc:mga06r32_353312_c1 3300050510 Bacteria 1454
201 nmdc:mga08y16_120043_c1 3300050511 Bacteria 2736
202 nmdc:mga08y16_1936_c1 3300050511 Bacteria 21123
203 nmdc:mga08x19_174434_c1 3300050514 Bacteria 1465
204 Ga0500578_0070623 3300053086 Bacteria 2226
205 Ga0500643_032114 3300053087 Bacteria 1596
206 Ga0500644_0014164 3300053088 Bacteria 2244
207 Ga0500583_0115898 3300053092 Bacteria 1323
208 Ga0500651_0031508 3300053093 Bacteria 3339
209 Ga0500594_0003767 3300053118 Bacteria 3338
210 Ga0500652_014906 3300053131 Bacteria 2793
211 Ga0500559_0000092 3300053136 Bacteria 71917
212 Ga0500590_008941 3300053148 Bacteria 5018
213 Ga0500619_066433 3300053154 Bacteria 1194
214 Ga0500620_061747 3300053155 Bacteria 1277
215 Ga0500622_0000585 3300053156 Bacteria 33068
216 Ga0500645_008026 3300053730 Bacteria 3636
217 Ga0500587_001147 3300053739 Bacteria 3654
218 Ga0501082_0264989 3300060353 Bacteria 1495
219 2587755848 2585428062 Bacteria 6842168
220 2644301851 2643221654 Bacteria 5273570
221 Ga0436365_1356577
222 Ga0065707_10115526
223 Ga0070690_100117755
224 Ga0070690_100188384
225 Ga0070680_100065319
226 Ga0068868_100166127
227 Ga0068868_100678438
228 Ga0070689_100004867
229 Ga0070689_100435790
230 Ga0070687_100364268
231 Ga0070688_100066446
232 Ga0070688_100093441
233 Ga0070700_100656392
234 Ga0070706_100339039
235 Ga0070699_100203153
236 Ga0070697_100117880
237 Ga0070686_100069227
238 Ga0070665_100008996
239 Ga0070665_100800091
240 Ga0068857_100181396
241 Ga0068864_100009857
242 Ga0068863_100302715
243 Ga0081455_10001710
244 Ga0081540_1013844
245 Ga0075365_10004760
246 Ga0075368_10008857
247 Ga0075363_100136780
248 Ga0075364_10015927
249 Ga0070716_100467893
250 Ga0075362_10018358
251 Ga0075367_10004452
252 Ga0075367_10058658
253 Ga0075366_10211242
254 Ga0097621_100253438
255 Ga0075370_10002838
256 Ga0075428_100000615
257 Ga0075431_100368821
258 Ga0075429_100000150
259 Ga0075429_100446666
260 Ga0075436_100381351
261 Ga0099794_10192910
262 Ga0099795_10055327
263 Ga0111539_10027345
264 Ga0111539_10169779
265 Ga0105245_10088625
266 Ga0105245_10237473
267 Ga0105245_10266371
268 Ga0114129_10000889
269 Ga0114129_10048724
270 Ga0105246_10897519
271 Ga0157378_10715869
272 Ga0163162_10051411
273 Ga0157372_10221252
274 Ga0163163_10990098
275 Ga0157379_10342712
276 Ga0213876_10080377
277 Ga0213875_10000007
278 Ga0213871_10000317
279 Ga0207684_10138907
280 Ga0207707_10651194
281 Ga0207662_10023012
282 Ga0207681_10432271
283 Ga0207687_10030080
284 Ga0207687_10132693
285 Ga0207670_10004950
286 Ga0207665_10703269
287 Ga0207711_10533671
288 Ga0207677_10009249
289 Ga0207708_10156862
290 Ga0207641_10019015
291 Ga0207641_10227263
292 Ga0207676_10033707
293 Ga0207674_10570935
294 Ga0207683_10169162
295 Ga0209813_10002599
296 Ga0207428_10019318
297 Ga0207428_10119762
298 Ga0268266_10024063
299 Ga0307517_10009033
300 Ga0307517_10111635
301 Ga0307515_10002038
302 Ga0307515_10011006
303 Ga0307515_10012290
304 Ga0307515_10038038
305 Ga0307515_10287619
306 Ga0265338_10114108
307 Ga0307512_10011610
308 Ga0307512_10040265
309 Ga0265320_10042668
310 Ga0265327_10011734
311 Ga0307513_10075651
312 Ga0307513_10521578
313 Ga0307509_10001216
314 Ga0307509_10011687
315 Ga0307509_10039549
316 Ga0307509_10108410
317 Ga0307509_10431953
318 Ga0307408_100341801
319 Ga0307508_10022566
320 Ga0307508_10026018
321 Ga0307508_10097722
322 Ga0307508_10431165
323 Ga0307514_10189102
324 Ga0265314_10132092
325 Ga0307516_10015404
326 Ga0307507_10103212
327 Ga0307510_10051446
328 Ga0307510_10194534
329 Ga0307510_10241055
330 Ga0373930_0001882
331 Ga0373950_0004277
332 Ga0373958_0033578
333 Ga0373940_0001551
334 Ga0373949_0010414
335 Ga0373951_0006250
336 Ga0373951_0023497
337 Ga0373952_0002579
338 Ga0373932_0001635
339 Ga0373932_0009367
340 Ga0373939_0087204
341 Ga0373960_0010436
342 Ga0373960_0015973
343 Ga0373943_0165529
344 Ga0373942_0012016
345 Ga0373961_0005346
346 Ga0373962_0037395
347 Ga0373931_0000123
348 Ga0373931_0014245
349 Ga0373925_0216958
350 Ga0373925_0283812
351 Ga0373925_0646462
352 Ga0436364_0461857
353 Ga0436365_0038154
354 Ga0436365_0959367
355 Ga0436360_0764361
356 Ga0436361_0082688
357 Ga0436361_1100871
358 Ga0451791_0829674
359 Ga0451793_0498605
360 Ga0451804_0997646
361 Ga0451577_0004835
362 Ga0451577_0017686
363 Ga0451577_0037457
364 Ga0451577_0057258
365 Ga0453683_0218533
366 Ga0453684_0219091
367 Ga0453684_0624800
368 Ga0466957_0065058
369 Ga0451576_0001013
370 Ga0451576_0026198
371 Ga0451576_0043265
372 Ga0451576_0052296
373 Ga0451576_0166394
374 Ga0451576_0255931
375 Ga0451576_0792770
376 Ga0466967_0674812
377 Ga0495592_0000563
378 Ga0495610_0017371
379 Ga0495632_0034465
380 Ga0495648_0151432
381 Ga0495625_0016815
382 Ga0495646_0057848
383 Ga0495676_0202687
384 Ga0495680_0323137
385 Ga0495675_0111985
386 Ga0495686_0023514
387 Ga0495686_0127474
388 Ga0495686_0176814
389 Ga0495593_0142300
390 Ga0496102_0012252
391 Ga0496106_0083596
392 Ga0496121_0120043
393 Ga0501032_0096315
394 Ga0501034_0411680
395 Ga0501036_0426342
396 Ga0501036_0745254
397 Ga0501043_0025514
398 Ga0501047_0338377
399 Ga0501067_0189583
400 Ga0501068_0090532
401 Ga0501068_0198012
402 Ga0501072_0334905
403 Ga0501072_0354437
404 Ga0501075_0100710
405 Ga0501076_0495746
406 Ga0501080_0513465
407 Ga0501035_0185928
408 Ga0501045_0218264
409 nmdc:mga03n38_4839_c1
410 nmdc:mga0yw44_180292_c1
411 nmdc:mga0k408_201616_c1
412 nmdc:mga0k408_732_c1
413 nmdc:mga06z11_6546_c1
414 nmdc:mga07m45_226427_c1
415 nmdc:mga07m45_434_c1
416 nmdc:mga05p37_390_c1
417 nmdc:mga05p37_8851_c1
418 nmdc:mga09592_1204_c1
419 nmdc:mga09592_204284_c1
420 nmdc:mga06r32_353312_c1
421 nmdc:mga08y16_120043_c1
422 nmdc:mga08y16_1936_c1
423 nmdc:mga08x19_174434_c1
424 Ga0500578_0070623
425 Ga0500643_032114
426 Ga0500644_0014164
427 Ga0500583_0115898
428 Ga0500651_0031508
429 Ga0500594_0003767
430 Ga0500652_014906
431 Ga0500559_0000092
432 Ga0500590_008941
433 Ga0500619_066433
434 Ga0500620_061747
435 Ga0500622_0000585
436 Ga0500645_008026
437 Ga0500587_001147
438 Ga0501082_0264989
439 2587755848
440 2644301851

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

64

210

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2awo-assembly2.cif.gz_D crystal structure of the adp-mg-bound e. coli malk (crystallized with adp-mg) 0.9476 5 225
1ji0-assembly1.cif.gz_A crystal structure analysis of the abc transporter from thermotoga maritima 0.9447 1 237
2awn-assembly2.cif.gz_D crystal structure of the adp-mg-bound e. coli malk (crystallized with atp-mg) 0.9302 5 225
4khz-assembly1.cif.gz_B crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose 0.9258 4 225
1ji0-assembly1.cif.gz_A crystal structure analysis of the abc transporter from thermotoga maritima 0.9257 1 237
ID Description Score Start End Superfamily
af_P22731_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9706 2 237 3.40.50.300
af_Q58664_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.967 5 237 3.40.50.300
af_P22731_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9545 2 237 3.40.50.300
af_Q58664_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.951 5 237 3.40.50.300
2awoD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.947 5 220 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V6SPS8-F1-model_v4 Branched-chain amino acid ABC transporter ATP-binding protein 0.9962 25 241 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A538SJJ0-F1-model_v4 ABC transporter ATP-binding protein 0.9961 1 220 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A538SJJ0-F1-model_v4 ABC transporter ATP-binding protein 0.9916 1 220 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A2V6SPS8-F1-model_v4 Branched-chain amino acid ABC transporter ATP-binding protein 0.9916 25 241 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A369T4K8-F1-model_v4 ABC transporter ATP-binding protein 0.9893 2 208 GO:0005524
GO:0015658
GO:0015807
GO:0016887

Map