F330985

General Info

Members Datasets Scaffolds Average Seq Length
219 167 438 412

Family's Representative Sequence

Representative Sequence 3300007265|Ga0099794_10003905|Ga0099794_100039052
Length 468
Sequence MQNQFHTQSAMHPTSAAGSPMSTAQPLHVSTGGAYRGSELASDLLTRLFRRLPMGLTLRLWNGATVRVGADSGAQEPPFELVFRNPEVVCSAVLGRDPLRLADAYFRGDLDIEGDFFAALALKEHLQELQMSVGEQIGAAAAAMRLRALNADSRHARTQWKPSHGPAVKAHSKAENRDAIHFHYDVSNEFYALWLDHAMVYSCAYFERPDVGLDAAQEAKLEHICRKLSLRPGENFLDIGCGWGALVIHAAQRHGVRAHGVTLSPQQLKVARERIAWAGLEDRVSVELLDYRDLKGESVYDKVASVGMFEHVGLKNLPVYFSTVHRLLKPHGLFLNHGITHDSDGWQKSLSTEFINRYVFPDGQLDNISNIEHVMESARFEIADVEALRAHYALTLRHWVERLERSHARALQYVNEATYRVWRLYMAACALEFEAGDIGIYQVLAGKRAAGNLPLPLTRRHLYEPQRG

Samples

Sample ID Description Type Environment
1 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
10 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
11 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
41 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
63 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
69 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
110 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
111 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
112 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
123 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
124 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
125 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
166 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
167 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.06
Metatranscriptomes 4.57
Isolates 1.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.11
Nodule 0.46
Rhizoplane 6.85
Rhizosphere 79.45
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099794_10003905 3300007265 Bacteria 5774
2 JGI25155J39150_1000142 3300002704 Bacteria 33693
3 JGI25156J39149_1000497 3300002705 Bacteria 23452
4 JGI25162J39368_1001938 3300002737 Bacteria 9364
5 JGI25154J39366_1000423 3300002738 Bacteria 22650
6 JGI25157J39369_1000158 3300002741 Bacteria 56328
7 JGI25157J39369_1000203 3300002741 Bacteria 49480
8 Ga0006759J45824_1040105 3300003163 Bacteria 1619
9 Ga0007417J51691_1011166 3300003544 Bacteria 2600
10 Ga0007409J51694_1010273 3300003575 Bacteria 2336
11 Ga0007416J51690_1007420 3300003577 Bacteria 3006
12 Ga0032354_1014230 3300003693 Bacteria 2371
13 Ga0055532_1000005 3300003758 Bacteria 458107
14 Ga0055535_1006704 3300003761 Bacteria 2293
15 Ga0070683_100177799 3300005329 Bacteria 2020
16 Ga0070680_100020812 3300005336 Bacteria 5206
17 Ga0070682_100011268 3300005337 Bacteria 5103
18 Ga0070661_100000505 3300005344 Bacteria 29903
19 Ga0070673_100117011 3300005364 Bacteria 2218
20 Ga0070711_100001717 3300005439 Bacteria 12149
21 Ga0070705_100014788 3300005440 Bacteria 4024
22 Ga0070681_10175147 3300005458 Bacteria 2067
23 Ga0070679_100034032 3300005530 Bacteria 5048
24 Ga0070679_100224435 3300005530 Bacteria 1839
25 Ga0068853_100006352 3300005539 Bacteria 9378
26 Ga0070695_100051671 3300005545 Bacteria 2638
27 Ga0070693_100050548 3300005547 Bacteria 2377
28 Ga0068855_100006594 3300005563 Bacteria 14115
29 Ga0068855_100025662 3300005563 Bacteria 7048
30 Ga0068855_100095077 3300005563 Bacteria 3435
31 Ga0068855_100106549 3300005563 Bacteria 3222
32 Ga0070664_100005484 3300005564 Bacteria 10186
33 Ga0070664_100006227 3300005564 Bacteria 9640
34 Ga0070664_100017425 3300005564 Bacteria 5898
35 Ga0068857_100070632 3300005577 Bacteria 3111
36 Ga0068854_100198894 3300005578 Bacteria 1574
37 Ga0068856_100128986 3300005614 Bacteria 2533
38 Ga0068856_100144994 3300005614 Bacteria 2382
39 Ga0068859_100067359 3300005617 Bacteria 3615
40 Ga0068859_100244764 3300005617 Bacteria 1883
41 Ga0068858_100011116 3300005842 Bacteria 8510
42 Ga0075362_10061442 3300006177 Bacteria 1700
43 Ga0097621_100009681 3300006237 Bacteria 7009
44 Ga0068871_100024343 3300006358 Bacteria 4694
45 Ga0075428_100012355 3300006844 Bacteria 9501
46 Ga0075433_10030642 3300006852 Bacteria 4591
47 Ga0068865_100053867 3300006881 Bacteria 2793
48 Ga0097620_100067359 3300006931 Bacteria 3615
49 Ga0097620_100244739 3300006931 Bacteria 1883
50 Ga0099795_10002740 3300007788 Bacteria 4224
51 Ga0105251_10015285 3300009011 Bacteria 4203
52 Ga0105240_10002905 3300009093 Bacteria 27041
53 Ga0105240_10003355 3300009093 Bacteria 24916
54 Ga0105240_10024664 3300009093 Bacteria 7922
55 Ga0105240_10185444 3300009093 Bacteria 2451
56 Ga0111539_10001609 3300009094 Bacteria 30148
57 Ga0105245_10021160 3300009098 Bacteria 5704
58 Ga0105247_10086039 3300009101 Bacteria 1989
59 Ga0105243_10039643 3300009148 Bacteria 3673
60 Ga0105241_10013856 3300009174 Bacteria 5906
61 Ga0105242_10001746 3300009176 Bacteria 17183
62 Ga0105242_10040787 3300009176 Bacteria 3741
63 Ga0105238_10035147 3300009551 Bacteria 5096
64 Ga0105238_10035298 3300009551 Bacteria 5084
65 Ga0105238_10101804 3300009551 Bacteria 2855
66 Ga0099796_10002579 3300010159 Bacteria 4015
67 Ga0157370_10004150 3300013104 Bacteria 16766
68 Ga0157370_10114855 3300013104 Bacteria 2515
69 Ga0157369_10005506 3300013105 Bacteria 14715
70 Ga0157374_10164546 3300013296 Bacteria 2161
71 Ga0157372_10008882 3300013307 Bacteria 10673
72 Ga0157372_10019000 3300013307 Bacteria 7397
73 Ga0157375_10247870 3300013308 Bacteria 1942
74 Ga0163163_10083289 3300014325 Bacteria 3204
75 Ga0157379_10150861 3300014968 Bacteria 2096
76 Ga0163161_10062816 3300017792 Bacteria 2706
77 Ga0206351_10956377 3300020077 Bacteria 1671
78 Ga0206353_11106494 3300020082 Bacteria 1537
79 Ga0224712_10038060 3300022467 Bacteria 1795
80 Ga0209435_100004 3300025206 Bacteria 633417
81 Ga0209147_100011 3300025229 Bacteria 702140
82 Ga0209437_100084 3300025233 Bacteria 255423
83 Ga0209258_100560 3300025242 Bacteria 32331
84 Ga0209646_1000032 3300025246 Bacteria 375315
85 Ga0209026_1000062 3300025250 Bacteria 213298
86 Ga0209759_1000054 3300025256 Bacteria 211422
87 Ga0207682_10042481 3300025893 Bacteria 1858
88 Ga0207654_10011617 3300025911 Bacteria 4494
89 Ga0207707_10037860 3300025912 Bacteria 4214
90 Ga0207707_10081119 3300025912 Bacteria 2832
91 Ga0207695_10001902 3300025913 Bacteria 32583
92 Ga0207695_10002497 3300025913 Bacteria 27080
93 Ga0207695_10065040 3300025913 Bacteria 3751
94 Ga0207695_10112995 3300025913 Bacteria 2693
95 Ga0207663_10033954 3300025916 Bacteria 3045
96 Ga0207660_10037487 3300025917 Bacteria 3379
97 Ga0207660_10079537 3300025917 Bacteria 2405
98 Ga0207649_10000631 3300025920 Bacteria 23607
99 Ga0207649_10085906 3300025920 Bacteria 2049
100 Ga0207652_10039679 3300025921 Bacteria 3996
101 Ga0207652_10070152 3300025921 Bacteria 3043
102 Ga0207652_10143678 3300025921 Bacteria 2134
103 Ga0207652_10199663 3300025921 Bacteria 1800
104 Ga0207694_10047398 3300025924 Bacteria 3324
105 Ga0207694_10071022 3300025924 Bacteria 2720
106 Ga0207700_10043834 3300025928 Bacteria 3289
107 Ga0207664_10101191 3300025929 Bacteria 2381
108 Ga0207690_10002780 3300025932 Bacteria 10571
109 Ga0207686_10017081 3300025934 Bacteria 4082
110 Ga0207709_10037204 3300025935 Bacteria 2890
111 Ga0207691_10228762 3300025940 Bacteria 1611
112 Ga0207689_10083532 3300025942 Bacteria 2625
113 Ga0207679_10000171 3300025945 Bacteria 53317
114 Ga0207679_10022078 3300025945 Bacteria 4328
115 Ga0207667_10045800 3300025949 Bacteria 4632
116 Ga0207667_10072418 3300025949 Bacteria 3582
117 Ga0207667_10087097 3300025949 Bacteria 3231
118 Ga0207703_10024357 3300026035 Bacteria 4763
119 Ga0207703_10088989 3300026035 Bacteria 2592
120 Ga0207639_10226050 3300026041 Bacteria 1619
121 Ga0207678_10001906 3300026067 Bacteria 19038
122 Ga0207674_10087404 3300026116 Bacteria 3111
123 Ga0207698_10002422 3300026142 Bacteria 11040
124 Ga0207698_10150557 3300026142 Bacteria 2019
125 Ga0209967_1003311 3300027364 Bacteria 2120
126 Ga0209981_1001448 3300027378 Bacteria 2999
127 Ga0209999_1005605 3300027543 Bacteria 2258
128 Ga0207428_10018726 3300027907 Bacteria 5909
129 Ga0265770_1000512 3300030878 Bacteria 5399
130 Ga0265760_10008223 3300031090 Bacteria 2982
131 Ga0265328_10000099 3300031239 Bacteria 42676
132 Ga0265331_10005125 3300031250 Bacteria 7985
133 Ga0265331_10046042 3300031250 Unclassified 2104
134 Ga0265327_10001290 3300031251 Bacteria 32882
135 Ga0265327_10001492 3300031251 Bacteria 29107
136 Ga0265327_10013583 3300031251 Bacteria 5400
137 Ga0265314_10075968 3300031711 Bacteria 2234
138 Ga0307510_10137421 3300033180 Bacteria 2098
139 Ga0373937_0273091 3300036401 Bacteria 1596
140 Ga0395900_0002635 3300037418 Bacteria 19593
141 Ga0395900_0197130 3300037418 Bacteria 2039
142 Ga0395898_0006734 3300037466 Bacteria 12251
143 Ga0395905_0018923 3300037471 Bacteria 6531
144 Ga0395905_0117719 3300037471 Bacteria 2497
145 Ga0395901_0003732 3300038443 Bacteria 15344
146 Ga0436365_1190747 3300039437 Bacteria 1722
147 Ga0436365_1387348 3300039437 Bacteria 3246
148 Ga0439441_003028 3300042001 Bacteria 2430
149 Ga0439434_0005345 3300042435 Bacteria 3758
150 Ga0439435_0000175 3300042436 Bacteria 8983
151 Ga0466972_0000165 3300044658 Bacteria 52836
152 Ga0466965_0001339 3300044683 Bacteria 9861
153 Ga0466964_0004571 3300044706 Bacteria 5118
154 Ga0466964_0010548 3300044706 Bacteria 3486
155 Ga0453684_0353244 3300044712 Bacteria 1657
156 Ga0466970_0004002 3300044765 Bacteria 7230
157 Ga0466957_0044852 3300044842 Bacteria 2680
158 Ga0466960_0020928 3300044901 Bacteria 2906
159 Ga0466959_0002320 3300045049 Bacteria 12145
160 Ga0451576_0262043 3300045051 Bacteria 1807
161 Ga0495643_0005113 3300046522 Bacteria 8971
162 Ga0495642_0002923 3300046528 Bacteria 6804
163 Ga0495597_0017675 3300046542 Bacteria 3351
164 Ga0495661_0008809 3300046665 Bacteria 6960
165 Ga0495687_026327 3300047443 Bacteria 2739
166 Ga0496100_0025390 3300048903 Bacteria 3624
167 Ga0496101_0019657 3300048904 Bacteria 4616
168 Ga0496101_0024336 3300048904 Bacteria 4190
169 Ga0496102_0008984 3300048905 Bacteria 8575
170 Ga0496102_0009680 3300048905 Bacteria 8288
171 Ga0496103_0011821 3300048906 Bacteria 5180
172 Ga0496104_0045033 3300048907 Bacteria 4148
173 Ga0496104_0067136 3300048907 Bacteria 3406
174 Ga0496105_0125725 3300048908 Bacteria 2113
175 Ga0496106_0067269 3300048909 Bacteria 2731
176 Ga0496107_0021596 3300048910 Bacteria 4550
177 Ga0496111_0010743 3300048914 Bacteria 6157
178 Ga0496114_0000266 3300048917 Bacteria 38011
179 Ga0496115_0002845 3300048918 Bacteria 12453
180 Ga0496115_0043928 3300048918 Bacteria 3563
181 Ga0496116_0010763 3300048919 Bacteria 7634
182 Ga0496118_0087007 3300048921 Bacteria 2169
183 Ga0496121_0119512 3300048924 Bacteria 1993
184 Ga0496122_0000513 3300048925 Bacteria 80013
185 Ga0496123_0000145 3300048926 Bacteria 144475
186 Ga0496125_0001481 3300048928 Bacteria 33868
187 Ga0496125_0032436 3300048928 Bacteria 4640
188 Ga0501037_0003175 3300049573 Bacteria 11931
189 Ga0501038_0046955 3300049574 Bacteria 3742
190 Ga0501039_0000396 3300049575 Bacteria 31278
191 Ga0501047_0001153 3300049581 Bacteria 26233
192 Ga0501047_0002501 3300049581 Bacteria 17523
193 Ga0501047_0047116 3300049581 Bacteria 4165
194 Ga0501070_0009668 3300049586 Bacteria 8154
195 Ga0501071_0045864 3300049587 Bacteria 3138
196 Ga0501072_0063121 3300049588 Bacteria 2922
197 Ga0501073_0001481 3300049589 Bacteria 17397
198 Ga0501073_0155635 3300049589 Bacteria 1584
199 Ga0501074_0001266 3300049590 Bacteria 16695
200 Ga0501079_0004022 3300049741 Bacteria 10880
201 Ga0501080_0000001 3300049742 Bacteria 241365
202 Ga0501080_0002979 3300049742 Bacteria 14907
203 Ga0501080_0068811 3300049742 Bacteria 3293
204 Ga0501080_0166699 3300049742 Bacteria 2032
205 Ga0501083_0009459 3300049744 Bacteria 6884
206 Ga0501035_0000013 3300049822 Bacteria 255756
207 Ga0501044_0000004 3300049823 Bacteria 327475
208 Ga0501044_0168870 3300049823 Bacteria 2160
209 nmdc:mga0k408_114578_c1 3300050493 Bacteria 1594
210 nmdc:mga06r32_216410_c1 3300050510 Bacteria 1903
211 nmdc:mga08y16_390_c1 3300050511 Bacteria 40107
212 nmdc:mga08x19_2547_c1 3300050514 Bacteria 11078
213 nmdc:mga0a205_11677_c1 3300050515 Bacteria 8099
214 Ga0500573_0085801 3300053140 Bacteria 1785
215 Ga0501084_0103928 3300054114 Bacteria 2386
216 Ga0501082_0011512 3300060353 Bacteria 7615
217 2550692421 2548876994 Bacteria 4904866
218 2819592564 2818991445 Bacteria 4955017
219 2939633940 2939631187 Bacteria 6118131
220 Ga0099794_10003905
221 JGI25155J39150_1000142
222 JGI25156J39149_1000497
223 JGI25162J39368_1001938
224 JGI25154J39366_1000423
225 JGI25157J39369_1000158
226 JGI25157J39369_1000203
227 Ga0006759J45824_1040105
228 Ga0007417J51691_1011166
229 Ga0007409J51694_1010273
230 Ga0007416J51690_1007420
231 Ga0032354_1014230
232 Ga0055532_1000005
233 Ga0055535_1006704
234 Ga0070683_100177799
235 Ga0070680_100020812
236 Ga0070682_100011268
237 Ga0070661_100000505
238 Ga0070673_100117011
239 Ga0070711_100001717
240 Ga0070705_100014788
241 Ga0070681_10175147
242 Ga0070679_100034032
243 Ga0070679_100224435
244 Ga0068853_100006352
245 Ga0070695_100051671
246 Ga0070693_100050548
247 Ga0068855_100006594
248 Ga0068855_100025662
249 Ga0068855_100095077
250 Ga0068855_100106549
251 Ga0070664_100005484
252 Ga0070664_100006227
253 Ga0070664_100017425
254 Ga0068857_100070632
255 Ga0068854_100198894
256 Ga0068856_100128986
257 Ga0068856_100144994
258 Ga0068859_100067359
259 Ga0068859_100244764
260 Ga0068858_100011116
261 Ga0075362_10061442
262 Ga0097621_100009681
263 Ga0068871_100024343
264 Ga0075428_100012355
265 Ga0075433_10030642
266 Ga0068865_100053867
267 Ga0097620_100067359
268 Ga0097620_100244739
269 Ga0099795_10002740
270 Ga0105251_10015285
271 Ga0105240_10002905
272 Ga0105240_10003355
273 Ga0105240_10024664
274 Ga0105240_10185444
275 Ga0111539_10001609
276 Ga0105245_10021160
277 Ga0105247_10086039
278 Ga0105243_10039643
279 Ga0105241_10013856
280 Ga0105242_10001746
281 Ga0105242_10040787
282 Ga0105238_10035147
283 Ga0105238_10035298
284 Ga0105238_10101804
285 Ga0099796_10002579
286 Ga0157370_10004150
287 Ga0157370_10114855
288 Ga0157369_10005506
289 Ga0157374_10164546
290 Ga0157372_10008882
291 Ga0157372_10019000
292 Ga0157375_10247870
293 Ga0163163_10083289
294 Ga0157379_10150861
295 Ga0163161_10062816
296 Ga0206351_10956377
297 Ga0206353_11106494
298 Ga0224712_10038060
299 Ga0209435_100004
300 Ga0209147_100011
301 Ga0209437_100084
302 Ga0209258_100560
303 Ga0209646_1000032
304 Ga0209026_1000062
305 Ga0209759_1000054
306 Ga0207682_10042481
307 Ga0207654_10011617
308 Ga0207707_10037860
309 Ga0207707_10081119
310 Ga0207695_10001902
311 Ga0207695_10002497
312 Ga0207695_10065040
313 Ga0207695_10112995
314 Ga0207663_10033954
315 Ga0207660_10037487
316 Ga0207660_10079537
317 Ga0207649_10000631
318 Ga0207649_10085906
319 Ga0207652_10039679
320 Ga0207652_10070152
321 Ga0207652_10143678
322 Ga0207652_10199663
323 Ga0207694_10047398
324 Ga0207694_10071022
325 Ga0207700_10043834
326 Ga0207664_10101191
327 Ga0207690_10002780
328 Ga0207686_10017081
329 Ga0207709_10037204
330 Ga0207691_10228762
331 Ga0207689_10083532
332 Ga0207679_10000171
333 Ga0207679_10022078
334 Ga0207667_10045800
335 Ga0207667_10072418
336 Ga0207667_10087097
337 Ga0207703_10024357
338 Ga0207703_10088989
339 Ga0207639_10226050
340 Ga0207678_10001906
341 Ga0207674_10087404
342 Ga0207698_10002422
343 Ga0207698_10150557
344 Ga0209967_1003311
345 Ga0209981_1001448
346 Ga0209999_1005605
347 Ga0207428_10018726
348 Ga0265770_1000512
349 Ga0265760_10008223
350 Ga0265328_10000099
351 Ga0265331_10005125
352 Ga0265331_10046042
353 Ga0265327_10001290
354 Ga0265327_10001492
355 Ga0265327_10013583
356 Ga0265314_10075968
357 Ga0307510_10137421
358 Ga0373937_0273091
359 Ga0395900_0002635
360 Ga0395900_0197130
361 Ga0395898_0006734
362 Ga0395905_0018923
363 Ga0395905_0117719
364 Ga0395901_0003732
365 Ga0436365_1190747
366 Ga0436365_1387348
367 Ga0439441_003028
368 Ga0439434_0005345
369 Ga0439435_0000175
370 Ga0466972_0000165
371 Ga0466965_0001339
372 Ga0466964_0004571
373 Ga0466964_0010548
374 Ga0453684_0353244
375 Ga0466970_0004002
376 Ga0466957_0044852
377 Ga0466960_0020928
378 Ga0466959_0002320
379 Ga0451576_0262043
380 Ga0495643_0005113
381 Ga0495642_0002923
382 Ga0495597_0017675
383 Ga0495661_0008809
384 Ga0495687_026327
385 Ga0496100_0025390
386 Ga0496101_0019657
387 Ga0496101_0024336
388 Ga0496102_0008984
389 Ga0496102_0009680
390 Ga0496103_0011821
391 Ga0496104_0045033
392 Ga0496104_0067136
393 Ga0496105_0125725
394 Ga0496106_0067269
395 Ga0496107_0021596
396 Ga0496111_0010743
397 Ga0496114_0000266
398 Ga0496115_0002845
399 Ga0496115_0043928
400 Ga0496116_0010763
401 Ga0496118_0087007
402 Ga0496121_0119512
403 Ga0496122_0000513
404 Ga0496123_0000145
405 Ga0496125_0001481
406 Ga0496125_0032436
407 Ga0501037_0003175
408 Ga0501038_0046955
409 Ga0501039_0000396
410 Ga0501047_0001153
411 Ga0501047_0002501
412 Ga0501047_0047116
413 Ga0501070_0009668
414 Ga0501071_0045864
415 Ga0501072_0063121
416 Ga0501073_0001481
417 Ga0501073_0155635
418 Ga0501074_0001266
419 Ga0501079_0004022
420 Ga0501080_0000001
421 Ga0501080_0002979
422 Ga0501080_0068811
423 Ga0501080_0166699
424 Ga0501083_0009459
425 Ga0501035_0000013
426 Ga0501044_0000004
427 Ga0501044_0168870
428 nmdc:mga0k408_114578_c1
429 nmdc:mga06r32_216410_c1
430 nmdc:mga08y16_390_c1
431 nmdc:mga08x19_2547_c1
432 nmdc:mga0a205_11677_c1
433 Ga0500573_0085801
434 Ga0501084_0103928
435 Ga0501082_0011512
436 2550692421
437 2819592564
438 2939633940

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02353

CMAS

Mycolic acid cyclopropane synthetase

171

443

0.97

PF13649

Methyltransf_25

Methyltransferase domain

236

332

0.97

PF08242

Methyltransf_12

Methyltransferase domain

237

334

0.95

PF08241

Methyltransf_11

Methyltransferase domain

237

336

0.94

PF13847

Methyltransf_31

Methyltransferase domain

230

353

0.87

PF13489

Methyltransf_23

Methyltransferase domain

213

385

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1l1e-assembly2.cif.gz_B crystal structure of mycolic acid cyclopropane synthase pcaa complexed with s-adenosyl-l-homocysteine 0.9607 120 383
1l1e-assembly2.cif.gz_B crystal structure of mycolic acid cyclopropane synthase pcaa complexed with s-adenosyl-l-homocysteine 0.9571 120 383
3hem-assembly1.cif.gz_A structure of mycobacterium tuberculosis mycolic acid cyclopropane synthase cmaa2 in complex with dioctylamine 0.9557 113 383
1l1e-assembly1.cif.gz_A crystal structure of mycolic acid cyclopropane synthase pcaa complexed with s-adenosyl-l-homocysteine 0.9539 120 383
8t1a-assembly1.cif.gz_A crystal structure of s-adenosylmethionine-dependent methyltransferase umaa from mycobacterium tuberculosis (p32 twin) 0.9487 120 383
ID Description Score Start End Superfamily
1l1eB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9607 120 383 3.40.50.150
1l1eB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9571 120 383 3.40.50.150
3hemA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9557 113 383 3.40.50.150
af_Q5APD4_189_477_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9526 107 383 3.40.50.150
af_O69687_132_410_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9514 102 383 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A1A7C7W5-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.9897 2 401 GO:0008610
GO:0008825
GO:0032259
AF-A0A158KWH3-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase 0.9893 136 345 GO:0008168
GO:0008610
GO:0032259
AF-A0A3N5XDI2-F1-model_v4 Class I SAM-dependent methyltransferase 0.9821 1 399 GO:0008168
GO:0008610
GO:0032259
AF-A0A1A7C7W5-F1-model_v4 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.9799 2 401 GO:0008610
GO:0008825
GO:0032259
AF-A0A497ER25-F1-model_v4 SAM-dependent methyltransferase 0.979 155 231 GO:0016279
GO:0032259

Map