F330130

General Info

Members Datasets Scaffolds Average Seq Length
218 160 194 217

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10055542|Ga0307405_100555422
Length 240
Sequence VPFSLFLPPLSNHIVEAIQAIIDFILHIDQHLVAIVSNYQTWTYLILFLIIFAETGFVVTPFLPGDSLLFAAGAIIAKPESGLNILLMCLLLIVAAILGDLVNYHIGKYIGPKAFSGKYKLLKKDYLDKTQAFYHKYGGKTIIYARFVPIVRTFAPFIAGVGTMSYGRFASYNVIGAVLWITSFLFLGYFFGAIPVIKSNFTYVIFAIIFLSLLPPIIEVIRNRKKNKASVQEREKENVL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541302 Pedobacter sp. CF074 Isolate Unclassified
5 2739367651 Pedobacter sp. OK291 Isolate Unclassified
6 2739367656 Pedobacter sp. CF523 Isolate Unclassified
7 2739367663 Pedobacter sp. YR510 Isolate Unclassified
8 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
9 2818991437 Pedobacter terrae 518 Isolate Unclassified
10 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
11 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
12 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
13 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
14 2855730933 Achromobacter sp. HZ28 Isolate Nodule
15 2855767633 Achromobacter sp. HZ34 Isolate Nodule
16 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
17 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
18 2881633906 Lactiplantibacillus garii FI11369 Isolate Unclassified
19 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
20 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
21 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
22 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
23 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
24 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
25 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
26 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
27 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
28 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
29 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
30 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
31 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
32 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
33 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
34 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
37 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
38 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
39 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
40 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
65 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
66 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
90 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
91 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
92 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
93 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
114 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
131 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
132 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
133 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
134 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
135 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
136 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
137 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
138 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
139 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
140 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
154 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
155 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
160 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.99
Metatranscriptomes 0
Isolates 11.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.47
Nodule 0.92
Rhizoplane 0
Rhizosphere 73.85
Stem 0
Stem Tuber 0
Unclassified 13.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2559802 2162886007 Bacteria 1921
2 JGI25152J39213_1000049 3300002773 Bacteria 83240
3 JGI25150J39212_1000001 3300002774 Bacteria 1318726
4 JGI25151J46595_10000001 3300003187 Bacteria 887211
5 JGI25151J46595_10001424 3300003187 Bacteria 16345
6 JGI25153J46596_10000001 3300003215 Bacteria 748985
7 rootH1_10001029 3300003316 Bacteria 6749
8 rootH2_10008247 3300003320 Bacteria 78702
9 rootL2_10007184 3300003322 Bacteria 6119
10 rootL2_10019331 3300003322 Bacteria 7477
11 rootH1_10005834 3300003323 Bacteria 62785
12 rootH1_10193936 3300003323 Bacteria 4403
13 Ga0055529_1002296 3300003763 Bacteria 3835
14 Ga0055536_1000001 3300003781 Bacteria 630663
15 Ga0055530_10001273 3300003791 Bacteria 19042
16 Ga0055531_10000363 3300003794 Bacteria 43891
17 Ga0065714_10003649 3300005288 Bacteria 7111
18 Ga0065714_10064545 3300005288 Bacteria 38585
19 Ga0065704_10086094 3300005289 Bacteria 3153
20 Ga0065704_10320524 3300005289 Bacteria 853
21 Ga0070682_100149256 3300005337 Bacteria 1602
22 Ga0070674_100422585 3300005356 Bacteria 1094
23 Ga0070662_100266415 3300005457 Bacteria 1382
24 Ga0068855_100169252 3300005563 Bacteria 2475
25 Ga0068857_100540094 3300005577 Bacteria 1097
26 Ga0068861_100207534 3300005719 Bacteria 1648
27 Ga0068863_100548451 3300005841 Unclassified 1141
28 Ga0068862_100285712 3300005844 Bacteria 1513
29 Ga0068862_100445175 3300005844 Bacteria 1220
30 Ga0075428_100179664 3300006844 Bacteria 2291
31 Ga0075430_100141789 3300006846 Bacteria 2001
32 Ga0075429_100201910 3300006880 Bacteria 1742
33 Ga0068865_100259404 3300006881 Unclassified 1375
34 Ga0105244_10019543 3300009036 Bacteria 3779
35 Ga0111539_10020999 3300009094 Bacteria 8040
36 Ga0111539_10075832 3300009094 Bacteria 3961
37 Ga0114129_10947223 3300009147 Bacteria 1088
38 Ga0105243_10000046 3300009148 Bacteria 155277
39 Ga0105237_10007663 3300009545 Bacteria 11800
40 Ga0157373_10023898 3300013100 Bacteria 4428
41 Ga0157373_10123319 3300013100 Bacteria 1821
42 Ga0157371_10000016 3300013102 Bacteria 330495
43 Ga0157370_10000350 3300013104 Bacteria 58500
44 Ga0157370_10000562 3300013104 Bacteria 46367
45 Ga0157370_10051655 3300013104 Bacteria 3927
46 Ga0157370_10070680 3300013104 Bacteria 3295
47 Ga0157370_10146364 3300013104 Bacteria 2200
48 Ga0157370_10185128 3300013104 Bacteria 1934
49 Ga0157369_10000129 3300013105 Bacteria 108473
50 Ga0163162_10000186 3300013306 Bacteria 57565
51 Ga0157375_10508981 3300013308 Bacteria 1368
52 Ga0157380_10013974 3300014326 Bacteria 5863
53 Ga0157380_10511840 3300014326 Unclassified 1169
54 Ga0182008_10000006 3300014497 Bacteria 378521
55 Ga0182008_10000283 3300014497 Bacteria 39715
56 Ga0182008_10075538 3300014497 Bacteria 1658
57 Ga0182008_10276575 3300014497 Bacteria 873
58 Ga0182006_1000068 3300015261 Bacteria 144823
59 Ga0182006_1000301 3300015261 Bacteria 43124
60 Ga0182006_1004426 3300015261 Bacteria 6934
61 Ga0182007_10000003 3300015262 Bacteria 548244
62 Ga0182007_10020379 3300015262 Bacteria 2371
63 Ga0183373_1001 3300015682 Bacteria 1410374
64 Ga0163161_10000074 3300017792 Bacteria 101784
65 Ga0163161_10000085 3300017792 Bacteria 93534
66 Ga0163161_10000159 3300017792 Bacteria 62460
67 Ga0163161_10003138 3300017792 Bacteria 11649
68 Ga0163161_10013577 3300017792 Bacteria 5670
69 Ga0163161_10235472 3300017792 Bacteria 1422
70 Ga0163161_10454554 3300017792 Bacteria 1036
71 Ga0209258_107382 3300025242 Bacteria 1635
72 Ga0207425_1000002 3300025245 Bacteria 1362590
73 Ga0209129_1000002 3300025258 Bacteria 1359086
74 Ga0209455_1002246 3300025272 Bacteria 7593
75 Ga0209676_1000008 3300025292 Bacteria 991778
76 Ga0209025_1000004 3300025294 Bacteria 1361782
77 Ga0209025_1000055 3300025294 Bacteria 316748
78 Ga0209758_1000006 3300025297 Bacteria 1359562
79 Ga0209050_1000045 3300025298 Bacteria 388022
80 Ga0209257_1000006 3300025304 Bacteria 1570111
81 Ga0207655_1038428 3300025728 Bacteria 2092
82 Ga0207671_10002363 3300025914 Bacteria 20310
83 Ga0207659_10166915 3300025926 Bacteria 1733
84 Ga0207709_10000020 3300025935 Bacteria 392366
85 Ga0207704_10766795 3300025938 Unclassified 803
86 Ga0207679_10061964 3300025945 Bacteria 2786
87 Ga0207651_10334921 3300025960 Unclassified 1270
88 Ga0207676_10190564 3300026095 Bacteria 1804
89 Ga0207676_10747407 3300026095 Unclassified 951
90 Ga0207675_100432443 3300026118 Bacteria 1302
91 Ga0207428_10076656 3300027907 Unclassified 2618
92 Ga0268265_10288977 3300028380 Bacteria 1471
93 Ga0268265_10329178 3300028380 Bacteria 1387
94 Ga0268265_10347174 3300028380 Bacteria 1354
95 Ga0307515_10000003 3300028794 Bacteria 891317
96 Ga0316177_1079276 3300030731 Bacteria 6692
97 Ga0316176_1220529 3300030732 Bacteria 11720
98 Ga0316183_1116825 3300030742 Bacteria 56435
99 Ga0316181_1163475 3300030744 Bacteria 9442
100 Ga0307513_10054806 3300031456 Bacteria 4272
101 Ga0307513_10349775 3300031456 Bacteria 1226
102 Ga0307509_10216242 3300031507 Bacteria 1735
103 Ga0307408_100011002 3300031548 Bacteria 5970
104 Ga0307408_100231123 3300031548 Bacteria 1515
105 Ga0307405_10000003 3300031731 Bacteria 569064
106 Ga0307405_10055542 3300031731 Unclassified 2479
107 Ga0307413_10033063 3300031824 Bacteria 2940
108 Ga0307413_10048898 3300031824 Bacteria 2531
109 Ga0307410_10009816 3300031852 Bacteria 5391
110 Ga0307410_10078844 3300031852 Bacteria 2306
111 Ga0307406_10042039 3300031901 Bacteria 2852
112 Ga0307407_10000008 3300031903 Bacteria 191228
113 Ga0307407_10008523 3300031903 Bacteria 4713
114 Ga0307416_100000009 3300032002 Bacteria 374271
115 Ga0307416_100081006 3300032002 Bacteria 2743
116 Ga0307416_100414301 3300032002 Bacteria 1389
117 Ga0307414_10003659 3300032004 Bacteria 8238
118 Ga0307414_10096930 3300032004 Bacteria 2208
119 Ga0307414_10143999 3300032004 Bacteria 1870
120 Ga0307414_10415924 3300032004 Bacteria 1171
121 Ga0307414_10823561 3300032004 Bacteria 847
122 Ga0307411_10052111 3300032005 Bacteria 2674
123 Ga0307415_100068448 3300032126 Bacteria 2485
124 Ga0307415_100110283 3300032126 Bacteria 2040
125 Ga0316584_0072781 3300036712 Unclassified 2576
126 Ga0439435_0013757 3300042436 Bacteria 1987
127 Ga0451577_0000008 3300042876 Bacteria 692992
128 Ga0451577_0223256 3300042876 Unclassified 1703
129 Ga0451577_0480963 3300042876 Archaea 1127
130 Ga0453684_0000032 3300044712 Bacteria 745626
131 Ga0453684_0002180 3300044712 Bacteria 48848
132 Ga0453684_0004877 3300044712 Bacteria 27496
133 Ga0453684_0019050 3300044712 Bacteria 10479
134 Ga0453684_0308800 3300044712 Unclassified 1795
135 Ga0451576_0031810 3300045051 Bacteria 5624
136 Ga0466967_1532003 3300045976 Bacteria 664
137 Ga0495610_0000271 3300046512 Bacteria 54071
138 Ga0495610_0001217 3300046512 Bacteria 23162
139 Ga0495625_0172971 3300046660 Bacteria 1441
140 Ga0495681_0067519 3300047470 Bacteria 1629
141 Ga0496119_0078031 3300048922 Bacteria 1917
142 Ga0496122_0000404 3300048925 Bacteria 91618
143 Ga0496122_0392135 3300048925 Bacteria 708
144 Ga0496123_0001627 3300048926 Bacteria 30246
145 Ga0496125_0027196 3300048928 Bacteria 5191
146 Ga0501033_0594736 3300049570 Bacteria 759
147 Ga0501036_0333947 3300049572 Bacteria 1266
148 Ga0501039_0057279 3300049575 Bacteria 3018
149 Ga0501040_0086749 3300049576 Bacteria 2173
150 Ga0501041_0065729 3300049577 Bacteria 2222
151 Ga0501043_0359527 3300049579 Bacteria 1105
152 Ga0501046_0329075 3300049580 Bacteria 1112
153 Ga0501048_0162289 3300049582 Bacteria 1582
154 Ga0501073_0006662 3300049589 Bacteria 8603
155 Ga0501073_0079038 3300049589 Bacteria 2289
156 Ga0501074_0361699 3300049590 Bacteria 1030
157 Ga0501075_0038052 3300049591 Bacteria 3596
158 Ga0501076_0166933 3300049592 Bacteria 1794
159 Ga0501202_081699 3300049652 Unclassified 760
160 Ga0501206_003044 3300049653 Unclassified 2125
161 Ga0501217_008592 3300049661 Bacteria 2210
162 Ga0501222_008266 3300049662 Unclassified 1381
163 Ga0501222_029840 3300049662 Bacteria 747
164 Ga0501223_042504 3300049663 Unclassified 882
165 Ga0501235_023868 3300049669 Unclassified 1365
166 Ga0501247_001305 3300049677 Bacteria 2360
167 Ga0501249_008079 3300049679 Bacteria 2183
168 Ga0501257_000546 3300049686 Bacteria 7481
169 Ga0501259_001625 3300049688 Bacteria 3741
170 Ga0501225_0005524 3300049705 Bacteria 3706
171 Ga0501079_0045274 3300049741 Bacteria 3396
172 Ga0501081_0016667 3300049743 Bacteria 4859
173 Ga0501083_0271476 3300049744 Bacteria 1103
174 Ga0501035_0014272 3300049822 Bacteria 7333
175 Ga0501035_0259319 3300049822 Bacteria 1474
176 Ga0501044_0008947 3300049823 Bacteria 10944
177 Ga0501045_0059868 3300049824 Bacteria 2791
178 nmdc:mga05p37_385235_c1 3300050507 Bacteria 1641
179 nmdc:mga09592_99006_c1 3300050508 Bacteria 2496
180 nmdc:mga0qj67_191257_c1 3300050509 Bacteria 1663
181 nmdc:mga0qj67_324396_c1 3300050509 Bacteria 1246
182 nmdc:mga06r32_356644_c1 3300050510 Bacteria 1447
183 nmdc:mga06r32_42635_c1 3300050510 Bacteria 4316
184 nmdc:mga08y16_625839_c1 3300050511 Bacteria 1083
185 nmdc:mga08y16_9651_c1 3300050511 Bacteria 10134
186 Ga0500644_0167891 3300053088 Bacteria 891
187 Ga0500562_020365 3300053108 Bacteria 1722
188 Ga0500655_004432 3300053133 Bacteria 2532
189 Ga0500604_0000496 3300053151 Bacteria 10875
190 Ga0500622_0000049 3300053156 Bacteria 145793
191 Ga0500622_0000056 3300053156 Bacteria 142254
192 Ga0501084_0000625 3300054114 Bacteria 26970
193 Ga0590071_001671 3300059421 Bacteria 5781
194 Ga0590075_000984 3300059424 Bacteria 7368

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_1532003 Ga0466967_1532003_54_629 178
2 3300049572 Ga0501036_0333947 Ga0501036_0333947_259_918 179
3 3300049575 Ga0501039_0057279 Ga0501039_0057279_473_1132 179
4 3300049576 Ga0501040_0086749 Ga0501040_0086749_1234_1893 179
5 3300049577 Ga0501041_0065729 Ga0501041_0065729_1468_2127 179
6 3300049579 Ga0501043_0359527 Ga0501043_0359527_308_967 179
7 3300049580 Ga0501046_0329075 Ga0501046_0329075_297_956 179
8 3300049582 Ga0501048_0162289 Ga0501048_0162289_10_669 179
9 3300049591 Ga0501075_0038052 Ga0501075_0038052_2668_3327 179
10 3300049592 Ga0501076_0166933 Ga0501076_0166933_418_1077 179
11 3300049741 Ga0501079_0045274 Ga0501079_0045274_1559_2218 179
12 3300049743 Ga0501081_0016667 Ga0501081_0016667_1451_2110 179
13 3300049744 Ga0501083_0271476 Ga0501083_0271476_263_922 179
14 3300049824 Ga0501045_0059868 Ga0501045_0059868_2107_2766 179
15 3300013104 Ga0157370_10146364 Ga0157370_101463643 182
16 3300014497 Ga0182008_10000006 Ga0182008_10000006275 185
17 3300017792 Ga0163161_10235472 Ga0163161_102354721 185
18 3300050509 nmdc:mga0qj67_191257_c1 nmdc:mga0qj67_191257_c1_128_745 185
19 3300050510 nmdc:mga06r32_356644_c1 nmdc:mga06r32_356644_c1_671_1288 185
20 3300031824 Ga0307413_10048898 Ga0307413_100488986 186
21 3300031852 Ga0307410_10009816 Ga0307410_100098165 186
22 3300031903 Ga0307407_10008523 Ga0307407_100085232 186
23 3300032002 Ga0307416_100414301 Ga0307416_1004143013 186
24 3300013100 Ga0157373_10023898 Ga0157373_100238984 191
25 iso_pu_bacteria 2855730933 2855736307 197
26 iso_pu_bacteria 2855767633 2855773244 197
27 iso_pu_bacteria 2881412998 2881417337 197
28 3300044712 Ga0453684_0019050 Ga0453684_0019050_7581_8204 198
29 iso_pu_bacteria 2896344016 2896344858 198
30 3300044712 Ga0453684_0308800 Ga0453684_0308800_1059_1685 199
31 iso_pu_bacteria 2881633906 2881636056 199
32 3300003763 Ga0055529_1002296 Ga0055529_10022963 200
33 3300006880 Ga0075429_100201910 Ga0075429_1002019102 200
34 3300025242 Ga0209258_107382 Ga0209258_1073822 200
35 3300025272 Ga0209455_1002246 Ga0209455_10022464 200
36 3300049570 Ga0501033_0594736 Ga0501033_0594736_99_728 200
37 3300049822 Ga0501035_0014272 Ga0501035_0014272_2057_2686 200
38 3300049822 Ga0501035_0259319 Ga0501035_0259319_449_1078 200
39 3300050508 nmdc:mga09592_99006_c1 nmdc:mga09592_99006_c1_663_1325 200
40 3300050510 nmdc:mga06r32_42635_c1 nmdc:mga06r32_42635_c1_1408_2070 200
41 iso_pu_bacteria 8007375930 8007379199 200
42 3300003187 JGI25151J46595_10001424 JGI25151J46595_1000142413 201
43 3300005356 Ga0070674_100422585 Ga0070674_1004225852 201
44 3300005457 Ga0070662_100266415 Ga0070662_1002664152 201
45 3300005844 Ga0068862_100445175 Ga0068862_1004451751 201
46 3300006844 Ga0075428_100179664 Ga0075428_1001796642 201
47 3300009147 Ga0114129_10947223 Ga0114129_109472232 201
48 3300013308 Ga0157375_10508981 Ga0157375_105089812 201
49 3300025294 Ga0209025_1000055 Ga0209025_1000055150 201
50 3300025926 Ga0207659_10166915 Ga0207659_101669153 201
51 3300025945 Ga0207679_10061964 Ga0207679_100619643 201
52 3300028380 Ga0268265_10288977 Ga0268265_102889772 201
53 3300031548 Ga0307408_100231123 Ga0307408_1002311231 201
54 3300042436 Ga0439435_0013757 Ga0439435_0013757_887_1552 201
55 3300050507 nmdc:mga05p37_385235_c1 nmdc:mga05p37_385235_c1_206_856 201
56 3300059421 Ga0590071_001671 Ga0590071_001671_1524_2177 201
57 3300059424 Ga0590075_000984 Ga0590075_000984_4269_4922 201
58 3300054114 Ga0501084_0000625 Ga0501084_0000625_3582_4217 202
59 iso_pu_bacteria 2585427687 2586207675 202
60 iso_pu_bacteria 2738541283 2738757017 202
61 iso_pu_bacteria 2738541302 2738851845 202
62 iso_pu_bacteria 2739367651 2739590737 202
63 iso_pu_bacteria 2739367656 2739617850 202
64 iso_pu_bacteria 2739367663 2739644201 202
65 iso_pu_bacteria 2775506987 2776612407 202
66 iso_pu_bacteria 2818991437 2819546407 202
67 iso_pu_bacteria 2842722452 2842725089 202
68 iso_pu_bacteria 2842903701 2842908309 202
69 iso_pu_bacteria 2842909656 2842914255 202
70 iso_pu_bacteria 2849281842 2849285900 202
71 iso_pu_bacteria 2857627736 2857631081 202
72 iso_pu_bacteria 2902048731 2902050154 202
73 iso_pu_bacteria 2904445276 2904448717 202
74 iso_pu_bacteria 2945997725 2946002020 202
75 iso_pu_bacteria 2954016120 2954018905 202
76 iso_pu_bacteria 3003233435 3003236224 202
77 3300042876 Ga0451577_0223256 Ga0451577_0223256_473_1117 203
78 3300049823 Ga0501044_0008947 Ga0501044_0008947_1133_1783 203
79 3300003316 rootH1_10001029 rootH1_100010296 204
80 3300003320 rootH2_10008247 rootH2_1000824735 204
81 3300003322 rootL2_10007184 rootL2_100071846 204
82 3300003323 rootH1_10005834 rootH1_1000583428 204
83 3300005337 Ga0070682_100149256 Ga0070682_1001492562 204
84 3300015262 Ga0182007_10020379 Ga0182007_100203793 204
85 3300031456 Ga0307513_10054806 Ga0307513_100548062 204
86 3300031852 Ga0307410_10078844 Ga0307410_100788443 204
87 3300032005 Ga0307411_10052111 Ga0307411_100521111 204
88 3300032126 Ga0307415_100068448 Ga0307415_1000684483 204
89 3300036712 Ga0316584_0072781 Ga0316584_0072781_1670_2335 204
90 3300042876 Ga0451577_0000008 Ga0451577_0000008_646102_646755 204
91 3300044712 Ga0453684_0000032 Ga0453684_0000032_695256_695909 204
92 3300044712 Ga0453684_0002180 Ga0453684_0002180_18330_18971 204
93 3300046660 Ga0495625_0172971 Ga0495625_0172971_641_1285 204
94 3300049589 Ga0501073_0006662 Ga0501073_0006662_4746_5393 204
95 3300049589 Ga0501073_0079038 Ga0501073_0079038_1124_1774 204
96 2162886007 SwRhRL2b_contig_2559802 SwRhRL2b_0314.00001730 206
97 3300002773 JGI25152J39213_1000049 JGI25152J39213_100004937 206
98 3300002774 JGI25150J39212_1000001 JGI25150J39212_1000001410 206
99 3300003187 JGI25151J46595_10000001 JGI25151J46595_10000001391 206
100 3300003215 JGI25153J46596_10000001 JGI25153J46596_10000001280 206
101 3300003322 rootL2_10019331 rootL2_100193319 206
102 3300003323 rootH1_10193936 rootH1_101939364 206
103 3300003781 Ga0055536_1000001 Ga0055536_1000001348 206
104 3300003791 Ga0055530_10001273 Ga0055530_1000127317 206
105 3300003794 Ga0055531_10000363 Ga0055531_1000036310 206
106 3300005288 Ga0065714_10003649 Ga0065714_100036492 206
107 3300005288 Ga0065714_10064545 Ga0065714_1006454511 206
108 3300005289 Ga0065704_10086094 Ga0065704_100860942 206
109 3300005289 Ga0065704_10320524 Ga0065704_103205241 206
110 3300005563 Ga0068855_100169252 Ga0068855_1001692522 206
111 3300005577 Ga0068857_100540094 Ga0068857_1005400942 206
112 3300005719 Ga0068861_100207534 Ga0068861_1002075342 206
113 3300005841 Ga0068863_100548451 Ga0068863_1005484512 206
114 3300005844 Ga0068862_100285712 Ga0068862_1002857123 206
115 3300006846 Ga0075430_100141789 Ga0075430_1001417892 206
116 3300006881 Ga0068865_100259404 Ga0068865_1002594041 206
117 3300009036 Ga0105244_10019543 Ga0105244_100195433 206
118 3300009094 Ga0111539_10020999 Ga0111539_100209998 206
119 3300009094 Ga0111539_10075832 Ga0111539_100758322 206
120 3300009148 Ga0105243_10000046 Ga0105243_1000004693 206
121 3300009545 Ga0105237_10007663 Ga0105237_100076633 206
122 3300013100 Ga0157373_10123319 Ga0157373_101233192 206
123 3300013102 Ga0157371_10000016 Ga0157371_1000001674 206
124 3300013104 Ga0157370_10000350 Ga0157370_1000035030 206
125 3300013104 Ga0157370_10000562 Ga0157370_1000056244 206
126 3300013104 Ga0157370_10051655 Ga0157370_100516554 206
127 3300013104 Ga0157370_10070680 Ga0157370_100706803 206
128 3300013104 Ga0157370_10185128 Ga0157370_101851282 206
129 3300013105 Ga0157369_10000129 Ga0157369_1000012939 206
130 3300013306 Ga0163162_10000186 Ga0163162_1000018612 206
131 3300014326 Ga0157380_10013974 Ga0157380_100139744 206
132 3300014326 Ga0157380_10511840 Ga0157380_105118402 206
133 3300014497 Ga0182008_10000283 Ga0182008_1000028328 206
134 3300014497 Ga0182008_10075538 Ga0182008_100755382 206
135 3300014497 Ga0182008_10276575 Ga0182008_102765751 206
136 3300015261 Ga0182006_1000068 Ga0182006_1000068124 206
137 3300015261 Ga0182006_1000301 Ga0182006_100030127 206
138 3300015261 Ga0182006_1004426 Ga0182006_10044265 206
139 3300015262 Ga0182007_10000003 Ga0182007_10000003350 206
140 3300015682 Ga0183373_1001 Ga0183373_1001620 206
141 3300017792 Ga0163161_10000074 Ga0163161_1000007451 206
142 3300017792 Ga0163161_10000085 Ga0163161_1000008552 206
143 3300017792 Ga0163161_10000159 Ga0163161_1000015933 206
144 3300017792 Ga0163161_10003138 Ga0163161_100031388 206
145 3300017792 Ga0163161_10013577 Ga0163161_100135774 206
146 3300017792 Ga0163161_10454554 Ga0163161_104545541 206
147 3300025245 Ga0207425_1000002 Ga0207425_1000002761 206
148 3300025258 Ga0209129_1000002 Ga0209129_1000002761 206
149 3300025292 Ga0209676_1000008 Ga0209676_1000008513 206
150 3300025294 Ga0209025_1000004 Ga0209025_1000004429 206
151 3300025297 Ga0209758_1000006 Ga0209758_1000006429 206
152 3300025298 Ga0209050_1000045 Ga0209050_1000045272 206
153 3300025304 Ga0209257_1000006 Ga0209257_10000061202 206
154 3300025728 Ga0207655_1038428 Ga0207655_10384283 206
155 3300025914 Ga0207671_10002363 Ga0207671_100023632 206
156 3300025935 Ga0207709_10000020 Ga0207709_10000020249 206
157 3300025938 Ga0207704_10766795 Ga0207704_107667951 206
158 3300025960 Ga0207651_10334921 Ga0207651_103349212 206
159 3300026095 Ga0207676_10190564 Ga0207676_101905642 206
160 3300026095 Ga0207676_10747407 Ga0207676_107474071 206
161 3300026118 Ga0207675_100432443 Ga0207675_1004324432 206
162 3300027907 Ga0207428_10076656 Ga0207428_100766564 206
163 3300028380 Ga0268265_10329178 Ga0268265_103291783 206
164 3300028380 Ga0268265_10347174 Ga0268265_103471742 206
165 3300028794 Ga0307515_10000003 Ga0307515_10000003521 206
166 3300030731 Ga0316177_1079276 Ga0316177_10792769 206
167 3300030732 Ga0316176_1220529 Ga0316176_122052923 206
168 3300030742 Ga0316183_1116825 Ga0316183_111682547 206
169 3300030744 Ga0316181_1163475 Ga0316181_116347517 206
170 3300031456 Ga0307513_10349775 Ga0307513_103497752 206
171 3300031507 Ga0307509_10216242 Ga0307509_102162421 206
172 3300031548 Ga0307408_100011002 Ga0307408_1000110025 206
173 3300031731 Ga0307405_10000003 Ga0307405_10000003135 206
174 3300031731 Ga0307405_10055542 Ga0307405_100555422 206
175 3300031824 Ga0307413_10033063 Ga0307413_100330632 206
176 3300031901 Ga0307406_10042039 Ga0307406_100420392 206
177 3300031903 Ga0307407_10000008 Ga0307407_1000000819 206
178 3300032002 Ga0307416_100000009 Ga0307416_100000009292 206
179 3300032002 Ga0307416_100081006 Ga0307416_1000810062 206
180 3300032004 Ga0307414_10003659 Ga0307414_100036598 206
181 3300032004 Ga0307414_10096930 Ga0307414_100969303 206
182 3300032004 Ga0307414_10143999 Ga0307414_101439992 206
183 3300032004 Ga0307414_10415924 Ga0307414_104159241 206
184 3300032004 Ga0307414_10823561 Ga0307414_108235611 206
185 3300032126 Ga0307415_100110283 Ga0307415_1001102832 206
186 3300042876 Ga0451577_0480963 Ga0451577_0480963_202_855 206
187 3300044712 Ga0453684_0004877 Ga0453684_0004877_1628_2281 206
188 3300045051 Ga0451576_0031810 Ga0451576_0031810_3121_3774 206
189 3300046512 Ga0495610_0000271 Ga0495610_0000271_16928_17614 206
190 3300046512 Ga0495610_0001217 Ga0495610_0001217_7135_7821 206
191 3300047470 Ga0495681_0067519 Ga0495681_0067519_24_710 206
192 3300048922 Ga0496119_0078031 Ga0496119_0078031_649_1335 206
193 3300048925 Ga0496122_0000404 Ga0496122_0000404_80623_81282 206
194 3300048925 Ga0496122_0392135 Ga0496122_0392135_25_672 206
195 3300048926 Ga0496123_0001627 Ga0496123_0001627_9529_10188 206
196 3300048928 Ga0496125_0027196 Ga0496125_0027196_485_1144 206
197 3300049590 Ga0501074_0361699 Ga0501074_0361699_300_959 206
198 3300049652 Ga0501202_081699 Ga0501202_081699_46_726 206
199 3300049653 Ga0501206_003044 Ga0501206_003044_994_1647 206
200 3300049661 Ga0501217_008592 Ga0501217_008592_162_812 206
201 3300049662 Ga0501222_008266 Ga0501222_008266_104_757 206
202 3300049662 Ga0501222_029840 Ga0501222_029840_37_687 206
203 3300049663 Ga0501223_042504 Ga0501223_042504_60_740 206
204 3300049669 Ga0501235_023868 Ga0501235_023868_143_823 206
205 3300049677 Ga0501247_001305 Ga0501247_001305_409_1059 206
206 3300049679 Ga0501249_008079 Ga0501249_008079_282_968 206
207 3300049686 Ga0501257_000546 Ga0501257_000546_4593_5246 206
208 3300049688 Ga0501259_001625 Ga0501259_001625_579_1232 206
209 3300049705 Ga0501225_0005524 Ga0501225_0005524_607_1260 206
210 3300050509 nmdc:mga0qj67_324396_c1 nmdc:mga0qj67_324396_c1_53_709 206
211 3300050511 nmdc:mga08y16_625839_c1 nmdc:mga08y16_625839_c1_235_888 206
212 3300050511 nmdc:mga08y16_9651_c1 nmdc:mga08y16_9651_c1_4748_5413 206
213 3300053088 Ga0500644_0167891 Ga0500644_0167891_70_723 206
214 3300053108 Ga0500562_020365 Ga0500562_020365_673_1338 206
215 3300053133 Ga0500655_004432 Ga0500655_004432_984_1703 206
216 3300053151 Ga0500604_0000496 Ga0500604_0000496_4573_5238 206
217 3300053156 Ga0500622_0000049 Ga0500622_0000049_38942_39607 206
218 3300053156 Ga0500622_0000056 Ga0500622_0000056_106347_107012 206

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09335

VTT_dom

VTT domain

63

190

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zpp-assembly1.cif.gz_A g7941: a virulence factor from drechmaria coniospora 0.3166 33 170
2b0h-assembly1.cif.gz_A solution structure of vbs3 fragment of talin 0.3166 29 160
6ssr-assembly1.cif.gz_A crystal structure of human microsomal glutathione s-transferase 2 at 3.8 angstroms resolution 0.3144 53 176
2qrx-assembly1.cif.gz_A crystal structure of drosophila melanogaster translin protein 0.296 22 186
6sss-assembly1.cif.gz_C crystal structure of human microsomal glutathione s-transferase 2 0.2942 52 178
ID Description Score Start End Superfamily
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.7272 52 165 1.10.1760.20
af_P0ADR0_21_135_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.6899 52 165 1.10.1760.20
af_P96271_98_270_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.4211 49 166 3.40.630.30
af_A0A0R4IDZ8_1844_1969_3.10.20.90 Alpha Beta;Roll;Ubiquitin-like (UB roll);Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.3678 30 166 3.10.20.90
af_B8JIH2_720_836_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.366 37 166 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A538JIM8-F1-model_v4 DedA family protein 0.9171 30 205 GO:0005886
AF-A0A6N6S0L9-F1-model_v4 VTT domain-containing protein 0.9074 32 197 GO:0005886
AF-A0A560WF92-F1-model_v4 Membrane-associated protein 0.9013 28 205 GO:0005886
AF-A0A2V1NKF7-F1-model_v4 VTT domain-containing protein 0.901 27 205 GO:0005886
AF-A0A429EBH3-F1-model_v4 VTT domain-containing protein 0.8996 27 205 GO:0005886

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pLDDT pTM Quality
64.35 0.55 Medium
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Predicted Structure (AlphaFold2)

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