F329501

General Info

Members Datasets Scaffolds Average Seq Length
218 150 218 156

Family's Representative Sequence

Representative Sequence 3300005293|Ga0065715_10007983|Ga0065715_100079832
Length 178
Sequence VGVFCELVDARESCYKKSGISTGNSMKAIQGYHLIKPEDLLWRPSNLMKIPNADYLERTGSENLGARLWRLPPKSANTLHKHVRAEEFYFVLEGVGRMCVGDETLTVPKYGGVLVGPDQLRQVFNDTDVEVLWLIIGAPEELEFLPGAKTKPDISLIYPADPTQLPKELAGVEWPPRS

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
91 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
92 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
93 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
98 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
99 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
113 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
114 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
115 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
116 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
125 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
130 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
150 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.46
Nodule 0
Rhizoplane 5.05
Rhizosphere 93.58
Stem 0
Stem Tuber 0
Unclassified 0.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10043371 3300005289 Bacteria 985
2 Ga0065715_10007983 3300005293 Unclassified 2811
3 Ga0065715_10255645 3300005293 Bacteria 1148
4 Ga0065707_10031975 3300005295 Bacteria 1371
5 Ga0070690_100856973 3300005330 Unclassified 708
6 Ga0070666_10485649 3300005335 Unclassified 894
7 Ga0068868_100102791 3300005338 Bacteria 2314
8 Ga0068868_101437587 3300005338 Bacteria 644
9 Ga0070689_100426764 3300005340 Bacteria 1124
10 Ga0070691_10483253 3300005341 Bacteria 713
11 Ga0070668_100710243 3300005347 Unclassified 887
12 Ga0070675_100115587 3300005354 Unclassified 2275
13 Ga0070671_100082339 3300005355 Bacteria 2691
14 Ga0070671_100243212 3300005355 Bacteria 1528
15 Ga0070671_100427651 3300005355 Unclassified 1134
16 Ga0070673_100394810 3300005364 Bacteria 1236
17 Ga0070688_100336025 3300005365 Bacteria 1102
18 Ga0070688_100551782 3300005365 Bacteria 876
19 Ga0070688_100914800 3300005365 Bacteria 693
20 Ga0070667_100574237 3300005367 Bacteria 1038
21 Ga0070667_102005671 3300005367 Unclassified 545
22 Ga0070709_10175759 3300005434 Bacteria 1500
23 Ga0070709_10187852 3300005434 Unclassified 1455
24 Ga0070709_10818848 3300005434 Unclassified 732
25 Ga0070713_100302401 3300005436 Bacteria 1473
26 Ga0070713_101045192 3300005436 Unclassified 788
27 Ga0070710_10142163 3300005437 Unclassified 1472
28 Ga0070710_10516320 3300005437 Unclassified 820
29 Ga0070711_100237454 3300005439 Bacteria 1424
30 Ga0070711_100463920 3300005439 Unclassified 1039
31 Ga0070705_100977044 3300005440 Unclassified 686
32 Ga0070663_100031274 3300005455 Bacteria 3657
33 Ga0070663_101272770 3300005455 Bacteria 648
34 Ga0070706_100014852 3300005467 Bacteria 7197
35 Ga0070707_100439085 3300005468 Bacteria 1266
36 Ga0070698_100120058 3300005471 Unclassified 2589
37 Ga0070698_100727585 3300005471 Unclassified 935
38 Ga0070699_100303100 3300005518 Bacteria 1433
39 Ga0070699_100564421 3300005518 Unclassified 1037
40 Ga0070679_100247644 3300005530 Unclassified 1739
41 Ga0070697_100007124 3300005536 Bacteria 8695
42 Ga0070697_100030109 3300005536 Bacteria 4358
43 Ga0068853_100082310 3300005539 Unclassified 2819
44 Ga0070665_100103808 3300005548 Unclassified 2845
45 Ga0068855_100103426 3300005563 Bacteria 3277
46 Ga0068859_100328407 3300005617 Bacteria 1624
47 Ga0068861_100907854 3300005719 Bacteria 835
48 Ga0068863_100096210 3300005841 Bacteria 2811
49 Ga0068862_101694710 3300005844 Unclassified 640
50 Ga0081455_10007231 3300005937 Bacteria 11724
51 Ga0081455_10103993 3300005937 Bacteria 2273
52 Ga0070717_10027776 3300006028 Bacteria 4524
53 Ga0070717_11140337 3300006028 Unclassified 710
54 Ga0070716_100048973 3300006173 Bacteria 2392
55 Ga0070716_100470633 3300006173 Unclassified 920
56 Ga0070716_100637333 3300006173 Bacteria 806
57 Ga0070712_100095001 3300006175 Bacteria 2192
58 Ga0070712_100192338 3300006175 Unclassified 1597
59 Ga0070712_100237808 3300006175 Bacteria 1449
60 Ga0070712_100406163 3300006175 Bacteria 1126
61 Ga0070712_100436948 3300006175 Unclassified 1087
62 Ga0097621_100256441 3300006237 Bacteria 1533
63 Ga0097621_101509684 3300006237 Unclassified 638
64 Ga0068871_101629445 3300006358 Unclassified 611
65 Ga0075430_100824845 3300006846 Bacteria 764
66 Ga0075434_100646331 3300006871 Unclassified 1076
67 Ga0097620_100328419 3300006931 Bacteria 1624
68 Ga0075435_100260058 3300007076 Unclassified 1479
69 Ga0099795_10399610 3300007788 Bacteria 624
70 Ga0111539_10685440 3300009094 Bacteria 1193
71 Ga0111539_11284311 3300009094 Bacteria 849
72 Ga0105245_10986590 3300009098 Unclassified 886
73 Ga0105245_11129715 3300009098 Bacteria 830
74 Ga0105245_11979835 3300009098 Unclassified 636
75 Ga0105242_10328312 3300009176 Unclassified 1406
76 Ga0105242_10403412 3300009176 Unclassified 1276
77 Ga0105242_10724366 3300009176 Bacteria 976
78 Ga0105242_10776115 3300009176 Unclassified 946
79 Ga0105248_11308853 3300009177 Unclassified 820
80 Ga0105249_10128139 3300009553 Bacteria 2419
81 Ga0099796_10256513 3300010159 Unclassified 728
82 Ga0157370_10135740 3300013104 Bacteria 2293
83 Ga0157374_10044310 3300013296 Bacteria 4112
84 Ga0157374_10114780 3300013296 Bacteria 2593
85 Ga0157374_10401343 3300013296 Unclassified 1368
86 Ga0157378_10189399 3300013297 Bacteria 1939
87 Ga0157378_11955976 3300013297 Unclassified 636
88 Ga0163162_10322530 3300013306 Bacteria 1677
89 Ga0157376_10397515 3300014969 Unclassified 1332
90 Ga0213873_10082554 3300021358 Unclassified 901
91 Ga0213872_10200190 3300021361 Unclassified 856
92 Ga0207666_1001079 3300025271 Bacteria 3223
93 Ga0207697_10019419 3300025315 Unclassified 2784
94 Ga0207697_10404916 3300025315 Unclassified 606
95 Ga0207692_10030067 3300025898 Unclassified 2587
96 Ga0207692_10534154 3300025898 Unclassified 748
97 Ga0207688_10079198 3300025901 Bacteria 1874
98 Ga0207699_10303076 3300025906 Unclassified 1116
99 Ga0207684_10012991 3300025910 Bacteria 7210
100 Ga0207707_10946036 3300025912 Unclassified 710
101 Ga0207707_10948027 3300025912 Unclassified 709
102 Ga0207693_10149562 3300025915 Bacteria 1836
103 Ga0207693_10336592 3300025915 Bacteria 1181
104 Ga0207663_10057818 3300025916 Unclassified 2445
105 Ga0207663_10224171 3300025916 Unclassified 1369
106 Ga0207646_10221065 3300025922 Bacteria 1711
107 Ga0207646_10453816 3300025922 Unclassified 1156
108 Ga0207659_10242286 3300025926 Bacteria 1459
109 Ga0207664_10735380 3300025929 Bacteria 887
110 Ga0207644_10294546 3300025931 Bacteria 1306
111 Ga0207690_11080152 3300025932 Unclassified 669
112 Ga0207686_10586602 3300025934 Bacteria 875
113 Ga0207670_10088994 3300025936 Unclassified 2178
114 Ga0207670_10118549 3300025936 Bacteria 1920
115 Ga0207669_10372337 3300025937 Bacteria 1110
116 Ga0207669_10682466 3300025937 Unclassified 843
117 Ga0207704_10148969 3300025938 Bacteria 1648
118 Ga0207665_10025109 3300025939 Bacteria 3931
119 Ga0207665_10154719 3300025939 Bacteria 1645
120 Ga0207689_10880256 3300025942 Unclassified 756
121 Ga0207667_10076743 3300025949 Bacteria 3467
122 Ga0207712_10274678 3300025961 Bacteria 1373
123 Ga0207668_10230938 3300025972 Bacteria 1492
124 Ga0207668_10518053 3300025972 Bacteria 1028
125 Ga0207658_11840498 3300025986 Unclassified 552
126 Ga0207677_10666204 3300026023 Bacteria 920
127 Ga0207703_10392829 3300026035 Bacteria 1285
128 Ga0207702_10175719 3300026078 Unclassified 1968
129 Ga0207641_10918364 3300026088 Bacteria 870
130 Ga0207641_11590386 3300026088 Unclassified 655
131 Ga0207648_11406352 3300026089 Bacteria 656
132 Ga0207676_11869604 3300026095 Unclassified 599
133 Ga0207675_100867982 3300026118 Bacteria 918
134 Ga0207683_10043271 3300026121 Bacteria 3936
135 Ga0207683_10834033 3300026121 Unclassified 856
136 Ga0265337_1000706 3300028556 Bacteria 17597
137 Ga0265319_1030105 3300028563 Bacteria 1900
138 Ga0265319_1136144 3300028563 Unclassified 763
139 Ga0265334_10130206 3300028573 Unclassified 895
140 Ga0265322_10121624 3300028654 Unclassified 743
141 Ga0265338_10006619 3300028800 Bacteria 14674
142 Ga0265338_10031568 3300028800 Bacteria 5190
143 Ga0265338_10070806 3300028800 Unclassified 2987
144 Ga0265338_10477251 3300028800 Unclassified 880
145 Ga0265320_10019049 3300031240 Bacteria 3762
146 Ga0265320_10035141 3300031240 Bacteria 2542
147 Ga0265325_10099773 3300031241 Bacteria 1423
148 Ga0265340_10255732 3300031247 Bacteria 780
149 Ga0373951_0006593 3300035091 Bacteria 2653
150 Ga0373943_0009535 3300035170 Bacteria 4352
151 Ga0373943_0031627 3300035170 Bacteria 2512
152 Ga0373943_0288933 3300035170 Bacteria 929
153 Ga0373943_0500882 3300035170 Unclassified 710
154 Ga0373935_0071066 3300035692 Bacteria 2245
155 Ga0373933_0259722 3300035724 Bacteria 1120
156 Ga0373947_0307538 3300035725 Unclassified 1058
157 Ga0373947_0928513 3300035725 Bacteria 594
158 Ga0373937_0194920 3300036401 Bacteria 1904
159 Ga0373925_0034363 3300037068 Bacteria 3736
160 Ga0373925_0074345 3300037068 Bacteria 2574
161 Ga0373925_0360586 3300037068 Bacteria 1181
162 Ga0395900_0174140 3300037418 Bacteria 2189
163 Ga0395898_0171617 3300037466 Unclassified 2073
164 Ga0395905_0007261 3300037471 Bacteria 11041
165 Ga0395905_0611423 3300037471 Bacteria 992
166 Ga0395901_0016475 3300038443 Bacteria 7530
167 Ga0395901_0261849 3300038443 Bacteria 1800
168 Ga0395901_0482637 3300038443 Unclassified 1264
169 Ga0436360_0779679 3300039438 Unclassified 537
170 Ga0436361_0569207 3300039447 Unclassified 3636
171 Ga0436362_1249323 3300039453 Unclassified 3227
172 Ga0451807_0097838 3300041486 Unclassified 611
173 Ga0451835_0164625 3300041492 Unclassified 684
174 Ga0451839_1270324 3300041496 Unclassified 651
175 Ga0439455_0017388 3300042012 Bacteria 1675
176 Ga0439460_0082239 3300042461 Viruses 1012
177 Ga0453684_0176903 3300044712 Bacteria 2509
178 Ga0451576_0337433 3300045051 Bacteria 1578
179 Ga0495592_0117896 3300046454 Bacteria 1871
180 Ga0495651_0631981 3300046462 Bacteria 673
181 Ga0495582_0769127 3300046473 Unclassified 557
182 Ga0495630_0002210 3300046517 Bacteria 13551
183 Ga0495652_0411119 3300046529 Unclassified 956
184 Ga0495640_0138275 3300046533 Bacteria 1572
185 Ga0495586_0000269 3300046535 Bacteria 33523
186 Ga0495586_0080076 3300046535 Bacteria 1794
187 Ga0495645_0125237 3300046543 Unclassified 1806
188 Ga0495633_0388128 3300046558 Unclassified 632
189 Ga0495634_0050960 3300046642 Bacteria 2778
190 Ga0495634_0333368 3300046642 Unclassified 911
191 Ga0495635_0349237 3300046663 Unclassified 987
192 Ga0495647_0201761 3300046681 Unclassified 872
193 Ga0495674_0200524 3300047319 Bacteria 1655
194 Ga0495674_0775572 3300047319 Unclassified 747
195 Ga0495674_1014954 3300047319 Unclassified 635
196 Ga0495676_0209482 3300047321 Bacteria 1349
197 Ga0495675_0099401 3300047444 Unclassified 1822
198 Ga0495684_0382487 3300047471 Unclassified 992
199 Ga0495684_0416735 3300047471 Unclassified 940
200 Ga0495614_0516715 3300048089 Unclassified 569
201 Ga0496100_0422272 3300048903 Unclassified 1018
202 Ga0496101_0259657 3300048904 Unclassified 1355
203 Ga0496102_0595283 3300048905 Bacteria 1029
204 Ga0496103_0267492 3300048906 Bacteria 1100
205 Ga0496104_0590703 3300048907 Bacteria 1021
206 Ga0496107_0347937 3300048910 Unclassified 1103
207 Ga0496109_0225255 3300048912 Bacteria 1764
208 Ga0496109_0545928 3300048912 Bacteria 1093
209 Ga0496112_0237492 3300048915 Bacteria 1776
210 Ga0496115_0396328 3300048918 Unclassified 1121
211 nmdc:mga09592_748624_c1 3300050508 Bacteria 829
212 nmdc:mga06r32_1992263_c1 3300050510 Unclassified 514
213 nmdc:mga06r32_983064_c1 3300050510 Bacteria 797
214 nmdc:mga0a205_1027496_c1 3300050515 Unclassified 671
215 nmdc:mga0a205_516846_c1 3300050515 Unclassified 1050
216 Ga0495601_0538506 3300053077 Unclassified 752
217 Ga0495595_0537377 3300053084 Unclassified 597
218 Ga0500636_0230120 3300053177 Unclassified 960

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005439 Ga0070711_100237454 Ga0070711_1002374542 150
2 3300009177 Ga0105248_11308853 Ga0105248_113088532 150
3 3300025912 Ga0207707_10946036 Ga0207707_109460361 150
4 3300005365 Ga0070688_100551782 Ga0070688_1005517821 151
5 3300005434 Ga0070709_10175759 Ga0070709_101757592 151
6 3300009094 Ga0111539_11284311 Ga0111539_112843112 151
7 3300025912 Ga0207707_10948027 Ga0207707_109480272 151
8 3300025936 Ga0207670_10088994 Ga0207670_100889944 151
9 3300035091 Ga0373951_0006593 Ga0373951_0006593_1336_1791 151
10 3300035725 Ga0373947_0928513 Ga0373947_0928513_12_473 151
11 3300005530 Ga0070679_100247644 Ga0070679_1002476442 152
12 3300005289 Ga0065704_10043371 Ga0065704_100433712 153
13 3300005293 Ga0065715_10007983 Ga0065715_100079832 153
14 3300005293 Ga0065715_10255645 Ga0065715_102556452 153
15 3300005295 Ga0065707_10031975 Ga0065707_100319752 153
16 3300005330 Ga0070690_100856973 Ga0070690_1008569731 153
17 3300005335 Ga0070666_10485649 Ga0070666_104856492 153
18 3300005338 Ga0068868_100102791 Ga0068868_1001027914 153
19 3300005338 Ga0068868_101437587 Ga0068868_1014375871 153
20 3300005340 Ga0070689_100426764 Ga0070689_1004267641 153
21 3300005341 Ga0070691_10483253 Ga0070691_104832531 153
22 3300005347 Ga0070668_100710243 Ga0070668_1007102432 153
23 3300005354 Ga0070675_100115587 Ga0070675_1001155873 153
24 3300005355 Ga0070671_100082339 Ga0070671_1000823394 153
25 3300005355 Ga0070671_100243212 Ga0070671_1002432122 153
26 3300005355 Ga0070671_100427651 Ga0070671_1004276512 153
27 3300005364 Ga0070673_100394810 Ga0070673_1003948103 153
28 3300005365 Ga0070688_100336025 Ga0070688_1003360251 153
29 3300005365 Ga0070688_100914800 Ga0070688_1009148001 153
30 3300005367 Ga0070667_100574237 Ga0070667_1005742372 153
31 3300005367 Ga0070667_102005671 Ga0070667_1020056711 153
32 3300005434 Ga0070709_10187852 Ga0070709_101878522 153
33 3300005434 Ga0070709_10818848 Ga0070709_108188481 153
34 3300005436 Ga0070713_100302401 Ga0070713_1003024012 153
35 3300005436 Ga0070713_101045192 Ga0070713_1010451922 153
36 3300005437 Ga0070710_10142163 Ga0070710_101421632 153
37 3300005437 Ga0070710_10516320 Ga0070710_105163202 153
38 3300005439 Ga0070711_100463920 Ga0070711_1004639203 153
39 3300005440 Ga0070705_100977044 Ga0070705_1009770442 153
40 3300005455 Ga0070663_100031274 Ga0070663_1000312742 153
41 3300005455 Ga0070663_101272770 Ga0070663_1012727701 153
42 3300005467 Ga0070706_100014852 Ga0070706_1000148522 153
43 3300005468 Ga0070707_100439085 Ga0070707_1004390852 153
44 3300005471 Ga0070698_100120058 Ga0070698_1001200582 153
45 3300005471 Ga0070698_100727585 Ga0070698_1007275851 153
46 3300005518 Ga0070699_100303100 Ga0070699_1003031002 153
47 3300005518 Ga0070699_100564421 Ga0070699_1005644212 153
48 3300005536 Ga0070697_100007124 Ga0070697_1000071244 153
49 3300005536 Ga0070697_100030109 Ga0070697_1000301094 153
50 3300005539 Ga0068853_100082310 Ga0068853_1000823103 153
51 3300005548 Ga0070665_100103808 Ga0070665_1001038082 153
52 3300005563 Ga0068855_100103426 Ga0068855_1001034266 153
53 3300005617 Ga0068859_100328407 Ga0068859_1003284072 153
54 3300005719 Ga0068861_100907854 Ga0068861_1009078541 153
55 3300005841 Ga0068863_100096210 Ga0068863_1000962104 153
56 3300005844 Ga0068862_101694710 Ga0068862_1016947101 153
57 3300005937 Ga0081455_10007231 Ga0081455_100072317 153
58 3300005937 Ga0081455_10103993 Ga0081455_101039933 153
59 3300006028 Ga0070717_10027776 Ga0070717_100277762 153
60 3300006028 Ga0070717_11140337 Ga0070717_111403371 153
61 3300006173 Ga0070716_100048973 Ga0070716_1000489732 153
62 3300006173 Ga0070716_100470633 Ga0070716_1004706332 153
63 3300006173 Ga0070716_100637333 Ga0070716_1006373332 153
64 3300006175 Ga0070712_100095001 Ga0070712_1000950012 153
65 3300006175 Ga0070712_100192338 Ga0070712_1001923384 153
66 3300006175 Ga0070712_100237808 Ga0070712_1002378082 153
67 3300006175 Ga0070712_100406163 Ga0070712_1004061632 153
68 3300006175 Ga0070712_100436948 Ga0070712_1004369482 153
69 3300006237 Ga0097621_100256441 Ga0097621_1002564412 153
70 3300006237 Ga0097621_101509684 Ga0097621_1015096842 153
71 3300006358 Ga0068871_101629445 Ga0068871_1016294451 153
72 3300006846 Ga0075430_100824845 Ga0075430_1008248451 153
73 3300006871 Ga0075434_100646331 Ga0075434_1006463311 153
74 3300006931 Ga0097620_100328419 Ga0097620_1003284192 153
75 3300007076 Ga0075435_100260058 Ga0075435_1002600582 153
76 3300007788 Ga0099795_10399610 Ga0099795_103996102 153
77 3300009094 Ga0111539_10685440 Ga0111539_106854401 153
78 3300009098 Ga0105245_10986590 Ga0105245_109865902 153
79 3300009098 Ga0105245_11129715 Ga0105245_111297152 153
80 3300009098 Ga0105245_11979835 Ga0105245_119798351 153
81 3300009176 Ga0105242_10328312 Ga0105242_103283122 153
82 3300009176 Ga0105242_10403412 Ga0105242_104034123 153
83 3300009176 Ga0105242_10724366 Ga0105242_107243662 153
84 3300009176 Ga0105242_10776115 Ga0105242_107761152 153
85 3300009553 Ga0105249_10128139 Ga0105249_101281394 153
86 3300010159 Ga0099796_10256513 Ga0099796_102565131 153
87 3300013104 Ga0157370_10135740 Ga0157370_101357402 153
88 3300013296 Ga0157374_10044310 Ga0157374_100443105 153
89 3300013296 Ga0157374_10114780 Ga0157374_101147802 153
90 3300013296 Ga0157374_10401343 Ga0157374_104013433 153
91 3300013297 Ga0157378_10189399 Ga0157378_101893994 153
92 3300013297 Ga0157378_11955976 Ga0157378_119559761 153
93 3300013306 Ga0163162_10322530 Ga0163162_103225302 153
94 3300014969 Ga0157376_10397515 Ga0157376_103975153 153
95 3300021358 Ga0213873_10082554 Ga0213873_100825541 153
96 3300021361 Ga0213872_10200190 Ga0213872_102001901 153
97 3300025271 Ga0207666_1001079 Ga0207666_10010792 153
98 3300025315 Ga0207697_10019419 Ga0207697_100194194 153
99 3300025315 Ga0207697_10404916 Ga0207697_104049161 153
100 3300025898 Ga0207692_10030067 Ga0207692_100300673 153
101 3300025898 Ga0207692_10534154 Ga0207692_105341542 153
102 3300025901 Ga0207688_10079198 Ga0207688_100791982 153
103 3300025906 Ga0207699_10303076 Ga0207699_103030762 153
104 3300025910 Ga0207684_10012991 Ga0207684_1001299111 153
105 3300025915 Ga0207693_10149562 Ga0207693_101495621 153
106 3300025915 Ga0207693_10336592 Ga0207693_103365922 153
107 3300025916 Ga0207663_10057818 Ga0207663_100578182 153
108 3300025916 Ga0207663_10224171 Ga0207663_102241712 153
109 3300025922 Ga0207646_10221065 Ga0207646_102210653 153
110 3300025922 Ga0207646_10453816 Ga0207646_104538162 153
111 3300025926 Ga0207659_10242286 Ga0207659_102422862 153
112 3300025929 Ga0207664_10735380 Ga0207664_107353801 153
113 3300025931 Ga0207644_10294546 Ga0207644_102945462 153
114 3300025932 Ga0207690_11080152 Ga0207690_110801521 153
115 3300025934 Ga0207686_10586602 Ga0207686_105866021 153
116 3300025936 Ga0207670_10118549 Ga0207670_101185493 153
117 3300025937 Ga0207669_10372337 Ga0207669_103723372 153
118 3300025937 Ga0207669_10682466 Ga0207669_106824661 153
119 3300025938 Ga0207704_10148969 Ga0207704_101489692 153
120 3300025939 Ga0207665_10025109 Ga0207665_100251093 153
121 3300025939 Ga0207665_10154719 Ga0207665_101547192 153
122 3300025942 Ga0207689_10880256 Ga0207689_108802561 153
123 3300025949 Ga0207667_10076743 Ga0207667_100767435 153
124 3300025961 Ga0207712_10274678 Ga0207712_102746782 153
125 3300025972 Ga0207668_10230938 Ga0207668_102309382 153
126 3300025972 Ga0207668_10518053 Ga0207668_105180532 153
127 3300025986 Ga0207658_11840498 Ga0207658_118404981 153
128 3300026023 Ga0207677_10666204 Ga0207677_106662041 153
129 3300026035 Ga0207703_10392829 Ga0207703_103928292 153
130 3300026078 Ga0207702_10175719 Ga0207702_101757192 153
131 3300026088 Ga0207641_10918364 Ga0207641_109183641 153
132 3300026088 Ga0207641_11590386 Ga0207641_115903862 153
133 3300026089 Ga0207648_11406352 Ga0207648_114063522 153
134 3300026095 Ga0207676_11869604 Ga0207676_118696041 153
135 3300026118 Ga0207675_100867982 Ga0207675_1008679822 153
136 3300026121 Ga0207683_10043271 Ga0207683_100432713 153
137 3300026121 Ga0207683_10834033 Ga0207683_108340332 153
138 3300028556 Ga0265337_1000706 Ga0265337_10007062 153
139 3300028563 Ga0265319_1030105 Ga0265319_10301052 153
140 3300028563 Ga0265319_1136144 Ga0265319_11361442 153
141 3300028573 Ga0265334_10130206 Ga0265334_101302061 153
142 3300028654 Ga0265322_10121624 Ga0265322_101216242 153
143 3300028800 Ga0265338_10006619 Ga0265338_100066198 153
144 3300028800 Ga0265338_10031568 Ga0265338_100315684 153
145 3300028800 Ga0265338_10070806 Ga0265338_100708061 153
146 3300028800 Ga0265338_10477251 Ga0265338_104772512 153
147 3300031240 Ga0265320_10019049 Ga0265320_100190493 153
148 3300031240 Ga0265320_10035141 Ga0265320_100351414 153
149 3300031241 Ga0265325_10099773 Ga0265325_100997733 153
150 3300031247 Ga0265340_10255732 Ga0265340_102557322 153
151 3300035170 Ga0373943_0009535 Ga0373943_0009535_1986_2447 153
152 3300035170 Ga0373943_0031627 Ga0373943_0031627_1882_2352 153
153 3300035170 Ga0373943_0288933 Ga0373943_0288933_310_771 153
154 3300035170 Ga0373943_0500882 Ga0373943_0500882_47_517 153
155 3300035692 Ga0373935_0071066 Ga0373935_0071066_766_1236 153
156 3300035724 Ga0373933_0259722 Ga0373933_0259722_26_487 153
157 3300035725 Ga0373947_0307538 Ga0373947_0307538_123_584 153
158 3300036401 Ga0373937_0194920 Ga0373937_0194920_1153_1614 153
159 3300037068 Ga0373925_0034363 Ga0373925_0034363_3251_3721 153
160 3300037068 Ga0373925_0074345 Ga0373925_0074345_341_802 153
161 3300037068 Ga0373925_0360586 Ga0373925_0360586_648_1109 153
162 3300037418 Ga0395900_0174140 Ga0395900_0174140_109_573 153
163 3300037466 Ga0395898_0171617 Ga0395898_0171617_1091_1555 153
164 3300037471 Ga0395905_0007261 Ga0395905_0007261_9423_9887 153
165 3300037471 Ga0395905_0611423 Ga0395905_0611423_213_674 153
166 3300038443 Ga0395901_0016475 Ga0395901_0016475_1299_1763 153
167 3300038443 Ga0395901_0261849 Ga0395901_0261849_1123_1584 153
168 3300038443 Ga0395901_0482637 Ga0395901_0482637_747_1208 153
169 3300039438 Ga0436360_0779679 Ga0436360_0779679_15_479 153
170 3300039447 Ga0436361_0569207 Ga0436361_0569207_1614_2078 153
171 3300039453 Ga0436362_1249323 Ga0436362_1249323_2550_3014 153
172 3300041486 Ga0451807_0097838 Ga0451807_0097838_74_535 153
173 3300041492 Ga0451835_0164625 Ga0451835_0164625_14_475 153
174 3300041496 Ga0451839_1270324 Ga0451839_1270324_19_483 153
175 3300042012 Ga0439455_0017388 Ga0439455_0017388_647_1108 153
176 3300042461 Ga0439460_0082239 Ga0439460_0082239_239_700 153
177 3300044712 Ga0453684_0176903 Ga0453684_0176903_304_768 153
178 3300045051 Ga0451576_0337433 Ga0451576_0337433_492_953 153
179 3300046454 Ga0495592_0117896 Ga0495592_0117896_84_545 153
180 3300046462 Ga0495651_0631981 Ga0495651_0631981_182_652 153
181 3300046473 Ga0495582_0769127 Ga0495582_0769127_60_521 153
182 3300046517 Ga0495630_0002210 Ga0495630_0002210_12949_13410 153
183 3300046529 Ga0495652_0411119 Ga0495652_0411119_125_592 153
184 3300046533 Ga0495640_0138275 Ga0495640_0138275_232_699 153
185 3300046535 Ga0495586_0000269 Ga0495586_0000269_32221_32682 153
186 3300046535 Ga0495586_0080076 Ga0495586_0080076_452_922 153
187 3300046543 Ga0495645_0125237 Ga0495645_0125237_115_576 153
188 3300046558 Ga0495633_0388128 Ga0495633_0388128_64_525 153
189 3300046642 Ga0495634_0050960 Ga0495634_0050960_505_975 153
190 3300046642 Ga0495634_0333368 Ga0495634_0333368_257_718 153
191 3300046663 Ga0495635_0349237 Ga0495635_0349237_251_721 153
192 3300046681 Ga0495647_0201761 Ga0495647_0201761_144_605 153
193 3300047319 Ga0495674_0200524 Ga0495674_0200524_104_565 153
194 3300047319 Ga0495674_0775572 Ga0495674_0775572_56_517 153
195 3300047319 Ga0495674_1014954 Ga0495674_1014954_43_510 153
196 3300047321 Ga0495676_0209482 Ga0495676_0209482_63_524 153
197 3300047444 Ga0495675_0099401 Ga0495675_0099401_111_572 153
198 3300047471 Ga0495684_0382487 Ga0495684_0382487_479_949 153
199 3300047471 Ga0495684_0416735 Ga0495684_0416735_442_909 153
200 3300048089 Ga0495614_0516715 Ga0495614_0516715_85_546 153
201 3300048903 Ga0496100_0422272 Ga0496100_0422272_513_974 153
202 3300048904 Ga0496101_0259657 Ga0496101_0259657_656_1192 153
203 3300048905 Ga0496102_0595283 Ga0496102_0595283_153_614 153
204 3300048906 Ga0496103_0267492 Ga0496103_0267492_583_1044 153
205 3300048907 Ga0496104_0590703 Ga0496104_0590703_480_950 153
206 3300048910 Ga0496107_0347937 Ga0496107_0347937_333_869 153
207 3300048912 Ga0496109_0225255 Ga0496109_0225255_1062_1532 153
208 3300048912 Ga0496109_0545928 Ga0496109_0545928_256_726 153
209 3300048915 Ga0496112_0237492 Ga0496112_0237492_62_541 153
210 3300048918 Ga0496115_0396328 Ga0496115_0396328_39_500 153
211 3300050508 nmdc:mga09592_748624_c1 nmdc:mga09592_748624_c1_357_818 153
212 3300050510 nmdc:mga06r32_1992263_c1 nmdc:mga06r32_1992263_c1_31_492 153
213 3300050510 nmdc:mga06r32_983064_c1 nmdc:mga06r32_983064_c1_61_522 153
214 3300050515 nmdc:mga0a205_1027496_c1 nmdc:mga0a205_1027496_c1_129_599 153
215 3300050515 nmdc:mga0a205_516846_c1 nmdc:mga0a205_516846_c1_51_512 153
216 3300053077 Ga0495601_0538506 Ga0495601_0538506_165_632 153
217 3300053084 Ga0495595_0537377 Ga0495595_0537377_66_533 153
218 3300053177 Ga0500636_0230120 Ga0500636_0230120_117_578 153

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

67

137

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5j7m-assembly1.cif.gz_B crystal structure of cupin 2 conserved barrel domain protein from kribbella flavida dsm 17836 0.9482 39 112
1lr5-assembly2.cif.gz_B crystal structure of auxin binding protein 0.9031 38 116
1sfn-assembly1.cif.gz_A crystal structure of protein dr1152 from deinococcus radiodurans r1, pfam duf861 0.885 38 115
3rns-assembly1.cif.gz_A cupin 2 conserved barrel domain protein from leptotrichia buccalis 0.8844 38 115
2dct-assembly1.cif.gz_A crystal structure of the tt1209 from thermus thermophilus hb8 0.8718 37 116
ID Description Score Start End Superfamily
af_A0A143ZXM2_1983_2072_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8887 38 113 2.60.120.10
1sfnA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.885 38 115 2.60.120.10
af_C6T0Q1_25_220_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.884 36 112 2.60.120.10
af_Q03188_852_942_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.875 38 112 2.60.120.10
1zx5A02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8627 37 116 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A2U3AJB1-F1-model_v4 Cupin domain-containing protein 0.8901 37 115
AF-A0A831Y7Y0-F1-model_v4 Cupin domain-containing protein 0.8879 38 116
AF-A0A3D3AR77-F1-model_v4 mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) 0.8879 38 116 GO:0000271
GO:0004475
GO:0005525
GO:0009298
GO:0016853
AF-A0A4Y6V8A1-F1-model_v4 Cupin domain-containing protein 0.8876 38 114 GO:0004475
GO:0005976
GO:0009298
AF-A0A318PWL2-F1-model_v4 Uncharacterized protein 0.8872 38 114 GO:0004475
GO:0005976
GO:0009298

Feature Viewer

pLDDT pTM Quality
71.46 0.65 Medium
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Predicted Structure (AlphaFold2)

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